"probe","sequence_id","alias","description" "evm.model.contig_2036.10","evm.model.contig_2036.10","No alias"," (original description: no original description)" "evm.model.contig_2051.31","evm.model.contig_2051.31","No alias","(at1g01140 : 246.0) Encodes a CBL-interacting protein kinase with similarity to SOS2; CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 239.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: no original description)" "evm.model.contig_2057.8","evm.model.contig_2057.8","No alias"," no hits & (original description: no original description)" "evm.model.contig_2068.4","evm.model.contig_2068.4","No alias"," no hits & (original description: no original description)" "evm.model.contig_2082.3","evm.model.contig_2082.3","No alias"," no hits & (original description: no original description)" "evm.model.contig_2096.13","evm.model.contig_2096.13","No alias"," no hits & (original description: no original description)" "evm.model.contig_2102.8","evm.model.contig_2102.8","No alias","(at2g38270 : 155.0) Encodes protein homologous to CXIP1. CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter. However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.; CAX-interacting protein 2 (CXIP2); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: CAX interacting protein 1 (TAIR:AT3G54900.1); Has 5833 Blast hits to 5648 proteins in 1292 species: Archae - 30; Bacteria - 2544; Metazoa - 528; Fungi - 278; Plants - 476; Viruses - 0; Other Eukaryotes - 1977 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)" "evm.model.contig_2112.9","evm.model.contig_2112.9","No alias","(at3g03330 : 89.7) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03350.1); Has 112445 Blast hits to 112247 proteins in 3561 species: Archae - 906; Bacteria - 75731; Metazoa - 6658; Fungi - 6086; Plants - 2548; Viruses - 2; Other Eukaryotes - 20514 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)" "evm.model.contig_2115.6","evm.model.contig_2115.6","No alias","(at1g16080 : 162.0) unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description)" "evm.model.contig_2185.7","evm.model.contig_2185.7","No alias"," no hits & (original description: no original description)" "evm.model.contig_2280.4","evm.model.contig_2280.4","No alias","(at5g48220 : 113.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, catalytic activity; INVOLVED IN: metabolic process, tryptophan metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT2G04400.1). & (reliability: 226.0) & (original description: no original description)" "evm.model.contig_2296.5","evm.model.contig_2296.5","No alias"," no hits & (original description: no original description)" "evm.model.contig_2308.3","evm.model.contig_2308.3","No alias"," no hits & (original description: no original description)" "evm.model.contig_2356.1","evm.model.contig_2356.1","No alias","(at3g26570 : 117.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)" "evm.model.contig_2421.8","evm.model.contig_2421.8","No alias"," no hits & (original description: no original description)" "evm.model.contig_2448.2","evm.model.contig_2448.2","No alias"," no hits & (original description: no original description)" "evm.model.contig_2448.3","evm.model.contig_2448.3","No alias"," no hits & (original description: no original description)" "evm.model.contig_2502.21","evm.model.contig_2502.21","No alias"," no hits & (original description: no original description)" "evm.model.contig_2506.1","evm.model.contig_2506.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_2622.1","evm.model.contig_2622.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_2672.1","evm.model.contig_2672.1","No alias","(at2g25170 : 447.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 397.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 892.0) & (original description: no original description)" "evm.model.contig_2712.1","evm.model.contig_2712.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_3387.1","evm.model.contig_3387.1","No alias","(at2g32240 : 108.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)" "evm.model.contig_3397.21","evm.model.contig_3397.21","No alias"," no hits & (original description: no original description)" "evm.model.contig_3405.5","evm.model.contig_3405.5","No alias"," no hits & (original description: no original description)" "evm.model.contig_3416.3","evm.model.contig_3416.3","No alias","(at5g20410 : 257.0) Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.; monogalactosyldiacylglycerol synthase 2 (MGD2); CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1572 Blast hits to 1572 proteins in 585 species: Archae - 0; Bacteria - 1385; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description)" "evm.model.contig_3420.7","evm.model.contig_3420.7","No alias"," no hits & (original description: no original description)" "evm.model.contig_3431.1","evm.model.contig_3431.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_3440.10","evm.model.contig_3440.10","No alias"," no hits & (original description: no original description)" "evm.model.contig_3441.12","evm.model.contig_3441.12","No alias"," no hits & (original description: no original description)" "evm.model.contig_3443.2","evm.model.contig_3443.2","No alias"," no hits & (original description: no original description)" "evm.model.contig_3458.7","evm.model.contig_3458.7","No alias","(at1g68100 : 87.0) member of IAA-alanine resistance protein 1; IAA-ALANINE RESISTANT 1 (IAR1); FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); Has 3060 Blast hits to 2483 proteins in 472 species: Archae - 4; Bacteria - 929; Metazoa - 1358; Fungi - 209; Plants - 119; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)" "evm.model.contig_3488.9","evm.model.contig_3488.9","No alias"," no hits & (original description: no original description)" "evm.model.contig_3522.3","evm.model.contig_3522.3","No alias"," no hits & (original description: no original description)" "evm.model.contig_3544.1","evm.model.contig_3544.1","No alias",""(at4g15110 : 514.0) member of CYP97B; ""cytochrome P450, family 97, subfamily B, polypeptide 3"" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (o48921|c97b2_soybn : 513.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1028.0) & (original description: no original description)"" "evm.model.contig_3569.5","evm.model.contig_3569.5","No alias"," no hits & (original description: no original description)" "evm.model.contig_3583.7","evm.model.contig_3583.7","No alias"," no hits & (original description: no original description)" "evm.model.contig_3650.1","evm.model.contig_3650.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_4404.1","evm.model.contig_4404.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_4404.25","evm.model.contig_4404.25","No alias","(at5g63320 : 84.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description)" "evm.model.contig_4406.13","evm.model.contig_4406.13","No alias"," no hits & (original description: no original description)" "evm.model.contig_4413.10","evm.model.contig_4413.10","No alias","(at3g15870 : 156.0) Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 5 (TAIR:AT3G15850.1); Has 3450 Blast hits to 3450 proteins in 826 species: Archae - 0; Bacteria - 1558; Metazoa - 797; Fungi - 221; Plants - 106; Viruses - 4; Other Eukaryotes - 764 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)" "evm.model.contig_4419.6","evm.model.contig_4419.6","No alias"," no hits & (original description: no original description)" "evm.model.contig_4446.5","evm.model.contig_4446.5","No alias"," no hits & (original description: no original description)" "evm.model.contig_4450.16","evm.model.contig_4450.16","No alias"," no hits & (original description: no original description)" "evm.model.contig_4462.2","evm.model.contig_4462.2","No alias"," no hits & (original description: no original description)" "evm.model.contig_4488.10","evm.model.contig_4488.10","No alias","(at1g16445 : 97.4) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Putative rRNA methylase (InterPro:IPR010719); Has 1208 Blast hits to 1208 proteins in 621 species: Archae - 2; Bacteria - 1139; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 194.8) & (original description: no original description)" "evm.model.contig_4491.12","evm.model.contig_4491.12","No alias"," no hits & (original description: no original description)" "evm.model.contig_4511.1","evm.model.contig_4511.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_472.3","evm.model.contig_472.3","No alias"," no hits & (original description: no original description)" "evm.model.contig_481.13","evm.model.contig_481.13","No alias"," no hits & (original description: no original description)" "evm.model.contig_512.10","evm.model.contig_512.10","No alias"," no hits & (original description: no original description)" "evm.model.contig_512.11","evm.model.contig_512.11","No alias"," no hits & (original description: no original description)" "evm.model.contig_550.5","evm.model.contig_550.5","No alias","(at2g39670 : 127.0) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)" "evm.model.contig_595.2","evm.model.contig_595.2","No alias"," no hits & (original description: no original description)" "evm.model.contig_635.6","evm.model.contig_635.6","No alias"," no hits & (original description: no original description)" "evm.model.contig_646.2","evm.model.contig_646.2","No alias"," no hits & (original description: no original description)" "evm.model.contig_651.4","evm.model.contig_651.4","No alias"," no hits & (original description: no original description)" "evm.model.contig_665.1","evm.model.contig_665.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_686.1","evm.model.contig_686.1","No alias"," no hits & (original description: no original description)" "evm.model.contig_769.1","evm.model.contig_769.1","No alias"," no hits & (original description: no original description)"