"probe","sequence_id","alias","description" "evm.model.tig00000042.61","evm.model.tig00000042.61","No alias"," no hits & (original description: no original description)" "evm.model.tig00000076.74","evm.model.tig00000076.74","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.104","evm.model.tig00000093.104","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.93","evm.model.tig00000093.93","No alias"," no hits & (original description: no original description)" "evm.model.tig00000114.31","evm.model.tig00000114.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00000114.42","evm.model.tig00000114.42","No alias"," no hits & (original description: no original description)" "evm.model.tig00000144.8","evm.model.tig00000144.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00000157.15","evm.model.tig00000157.15","No alias","(at3g18480 : 266.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description)" "evm.model.tig00000158.14","evm.model.tig00000158.14","No alias","(at1g67820 : 123.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)" "evm.model.tig00000178.53","evm.model.tig00000178.53","No alias"," no hits & (original description: no original description)" "evm.model.tig00000334.10","evm.model.tig00000334.10","No alias"," no hits & (original description: no original description)" "evm.model.tig00000350.45","evm.model.tig00000350.45","No alias"," no hits & (original description: no original description)" "evm.model.tig00000361.5","evm.model.tig00000361.5","No alias","(p94026|rbcmt_tobac : 131.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 120.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)" "evm.model.tig00000448.55","evm.model.tig00000448.55","No alias"," no hits & (original description: no original description)" "evm.model.tig00000459.20","evm.model.tig00000459.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00000691.14","evm.model.tig00000691.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00000691.15","evm.model.tig00000691.15","No alias"," no hits & (original description: no original description)" "evm.model.tig00000842.19","evm.model.tig00000842.19","No alias","(at1g50240 : 182.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)" "evm.model.tig00000865.14","evm.model.tig00000865.14","No alias","(at2g36305 : 85.5) Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast.; farnesylated protein-converting enzyme 2 (FACE2); CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); Has 361 Blast hits to 361 proteins in 186 species: Archae - 0; Bacteria - 39; Metazoa - 116; Fungi - 118; Plants - 43; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)" "evm.model.tig00000870.18","evm.model.tig00000870.18","No alias"," no hits & (original description: no original description)" "evm.model.tig00000870.40","evm.model.tig00000870.40","No alias"," no hits & (original description: no original description)" "evm.model.tig00000880.34","evm.model.tig00000880.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00000912.44","evm.model.tig00000912.44","No alias"," no hits & (original description: no original description)" "evm.model.tig00000970.23","evm.model.tig00000970.23","No alias","(at2g47760 : 220.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description)" "evm.model.tig00000970.24","evm.model.tig00000970.24","No alias","(at2g47760 : 85.1) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)" "evm.model.tig00000984.23","evm.model.tig00000984.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00001041.8","evm.model.tig00001041.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00001056.19","evm.model.tig00001056.19","No alias","(at2g21470 : 275.0) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 2 (SAE2); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: E1 C-terminal related 1 (TAIR:AT5G19180.1). & (p31251|ube12_wheat : 135.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (reliability: 550.0) & (original description: no original description)" "evm.model.tig00001098.16","evm.model.tig00001098.16","No alias"," no hits & (original description: no original description)" "evm.model.tig00001164.12","evm.model.tig00001164.12","No alias","(at3g43210 : 85.9) Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.; TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)" "evm.model.tig00001284.9","evm.model.tig00001284.9","No alias"," no hits & (original description: no original description)" "evm.model.tig00001339.8","evm.model.tig00001339.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00001374.11","evm.model.tig00001374.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00001718.6","evm.model.tig00001718.6","No alias","(at2g20420 : 210.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 209.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (reliability: 420.0) & (original description: no original description)" "evm.model.tig00020510.72","evm.model.tig00020510.72","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.58","evm.model.tig00020553.58","No alias"," no hits & (original description: no original description)" "evm.model.tig00020556.41","evm.model.tig00020556.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00020556.95","evm.model.tig00020556.95","No alias"," no hits & (original description: no original description)" "evm.model.tig00020563.29","evm.model.tig00020563.29","No alias","(at2g28840 : 85.5) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)" "evm.model.tig00020592.56","evm.model.tig00020592.56","No alias","(at2g26590 : 92.4) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description)" "evm.model.tig00020629.104","evm.model.tig00020629.104","No alias","(at2g03430 : 124.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 112.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 224.0) & (original description: no original description)" "evm.model.tig00020734.19","evm.model.tig00020734.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00020830.122","evm.model.tig00020830.122","No alias"," no hits & (original description: no original description)" "evm.model.tig00020830.5","evm.model.tig00020830.5","No alias","(at1g15500 : 101.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 94.7) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: no original description)" "evm.model.tig00020875.14","evm.model.tig00020875.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00020904.38","evm.model.tig00020904.38","No alias"," no hits & (original description: no original description)" "evm.model.tig00020911.13","evm.model.tig00020911.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00020911.28","evm.model.tig00020911.28","No alias","(at1g08860 : 299.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)" "evm.model.tig00020934.32","evm.model.tig00020934.32","No alias"," no hits & (original description: no original description)" "evm.model.tig00021098.21","evm.model.tig00021098.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00021108.18","evm.model.tig00021108.18","No alias"," no hits & (original description: no original description)" "evm.model.tig00021127.175","evm.model.tig00021127.175","No alias"," no hits & (original description: no original description)" "evm.model.tig00021179.51","evm.model.tig00021179.51","No alias"," no hits & (original description: no original description)" "evm.model.tig00021293.28","evm.model.tig00021293.28","No alias"," no hits & (original description: no original description)" "evm.model.tig00021493.60","evm.model.tig00021493.60","No alias"," no hits & (original description: no original description)" "evm.model.tig00021531.14","evm.model.tig00021531.14","No alias","(at3g27380 : 319.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)" "evm.model.tig00021537.4","evm.model.tig00021537.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00021537.48","evm.model.tig00021537.48","No alias"," no hits & (original description: no original description)"