"probe","sequence_id","alias","description" "evm.model.tig00000025.27","evm.model.tig00000025.27","No alias","(at5g23670 : 516.0) Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.; long chain base2 (LCB2); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class-II, pyridoxal-phosphate binding site (InterPro:IPR001917), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: serine palmitoyltransferase 1 (TAIR:AT3G48780.1); Has 10446 Blast hits to 10416 proteins in 2172 species: Archae - 77; Bacteria - 7037; Metazoa - 738; Fungi - 589; Plants - 234; Viruses - 9; Other Eukaryotes - 1762 (source: NCBI BLink). & (reliability: 1032.0) & (original description: no original description)" "evm.model.tig00000042.103","evm.model.tig00000042.103","No alias","(at3g17470 : 120.0) Ca2+-activated RelA/spot homolog (CRSH); FUNCTIONS IN: GTP diphosphokinase activity, calcium ion binding; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 14021 Blast hits to 13962 proteins in 3173 species: Archae - 6; Bacteria - 8120; Metazoa - 1259; Fungi - 992; Plants - 727; Viruses - 0; Other Eukaryotes - 2917 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)" "evm.model.tig00000042.104","evm.model.tig00000042.104","No alias","(at5g43600 : 136.0) Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity.; ureidoglycolate amidohydrolase (UAH); FUNCTIONS IN: metallopeptidase activity, ureidoglycolate hydrolase activity; INVOLVED IN: proteolysis, allantoin catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: allantoate amidohydrolase (TAIR:AT4G20070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)" "evm.model.tig00000042.234","evm.model.tig00000042.234","No alias"," no hits & (original description: no original description)" "evm.model.tig00000042.5","evm.model.tig00000042.5","No alias","(at4g37760 : 401.0) squalene epoxidase 3 (SQE3); FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: response to jasmonic acid stimulus, response to wounding, sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953); BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o48651|erg1_pangi : 392.0) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng) & (reliability: 802.0) & (original description: no original description)" "evm.model.tig00000042.94","evm.model.tig00000042.94","No alias"," no hits & (original description: no original description)" "evm.model.tig00000057.127","evm.model.tig00000057.127","No alias"," no hits & (original description: no original description)" "evm.model.tig00000076.106","evm.model.tig00000076.106","No alias","(at2g36300 : 122.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G52760.1); Has 658 Blast hits to 658 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 123; Plants - 111; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)" "evm.model.tig00000093.53","evm.model.tig00000093.53","No alias"," no hits & (original description: no original description)" "evm.model.tig00000113.31","evm.model.tig00000113.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00000123.22","evm.model.tig00000123.22","No alias"," no hits & (original description: no original description)" "evm.model.tig00000142.19","evm.model.tig00000142.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00000144.29","evm.model.tig00000144.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00000144.31","evm.model.tig00000144.31","No alias","(at1g15110 : 259.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description)" "evm.model.tig00000147.62","evm.model.tig00000147.62","No alias"," no hits & (original description: no original description)" "evm.model.tig00000203.34","evm.model.tig00000203.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00000204.69","evm.model.tig00000204.69","No alias"," no hits & (original description: no original description)" "evm.model.tig00000215.112","evm.model.tig00000215.112","No alias"," no hits & (original description: no original description)" "evm.model.tig00000219.57","evm.model.tig00000219.57","No alias"," no hits & (original description: no original description)" "evm.model.tig00000241.105","evm.model.tig00000241.105","No alias","(at3g52140 : 92.8) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (reliability: 175.6) & (original description: no original description)" "evm.model.tig00000241.199","evm.model.tig00000241.199","No alias"," no hits & (original description: no original description)" "evm.model.tig00000241.35","evm.model.tig00000241.35","No alias"," no hits & (original description: no original description)" "evm.model.tig00000241.41","evm.model.tig00000241.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00000246.5","evm.model.tig00000246.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00000246.8","evm.model.tig00000246.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00000293.27","evm.model.tig00000293.27","No alias"," no hits & (original description: no original description)" "evm.model.tig00000293.29","evm.model.tig00000293.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00000319.26","evm.model.tig00000319.26","No alias"," no hits & (original description: no original description)" "evm.model.tig00000361.75","evm.model.tig00000361.75","No alias"," no hits & (original description: no original description)" "evm.model.tig00000405.7","evm.model.tig00000405.7","No alias"," no hits & (original description: no original description)" "evm.model.tig00000459.99","evm.model.tig00000459.99","No alias"," no hits & (original description: no original description)" "evm.model.tig00000488.12","evm.model.tig00000488.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00000492.118","evm.model.tig00000492.118","No alias"," no hits & (original description: no original description)" "evm.model.tig00000507.30","evm.model.tig00000507.30","No alias","(at3g48770 : 145.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)" "evm.model.tig00000525.6","evm.model.tig00000525.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00000615.39","evm.model.tig00000615.39","No alias"," no hits & (original description: no original description)" "evm.model.tig00000630.11","evm.model.tig00000630.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00000630.3","evm.model.tig00000630.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00000663.37","evm.model.tig00000663.37","No alias","(at3g66658 : 398.0) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.; aldehyde dehydrogenase 22A1 (ALDH22A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p17202|badh_spiol : 192.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 796.0) & (original description: no original description)" "evm.model.tig00000663.70","evm.model.tig00000663.70","No alias"," no hits & (original description: no original description)" "evm.model.tig00000681.16","evm.model.tig00000681.16","No alias"," no hits & (original description: no original description)" "evm.model.tig00000692.80","evm.model.tig00000692.80","No alias"," no hits & (original description: no original description)" "evm.model.tig00000792.6","evm.model.tig00000792.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00000802.19","evm.model.tig00000802.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00000808.21","evm.model.tig00000808.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00000823.23","evm.model.tig00000823.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00000823.29","evm.model.tig00000823.29","No alias","(at1g52590 : 95.9) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G24095.1); Has 955 Blast hits to 955 proteins in 365 species: Archae - 5; Bacteria - 640; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description)" "evm.model.tig00000826.20","evm.model.tig00000826.20","No alias","(at5g43530 : 117.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)" "evm.model.tig00000829.25","evm.model.tig00000829.25","No alias"," no hits & (original description: no original description)" "evm.model.tig00000851.13","evm.model.tig00000851.13","No alias","(at3g10350 : 114.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 224.0) & (original description: no original description)" "evm.model.tig00000851.31","evm.model.tig00000851.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00000865.19","evm.model.tig00000865.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00000889.38","evm.model.tig00000889.38","No alias","(at2g29650 : 126.0) Encodes an inorganic phosphate transporter that is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)" "evm.model.tig00000970.22","evm.model.tig00000970.22","No alias"," no hits & (original description: no original description)" "evm.model.tig00000989.23","evm.model.tig00000989.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00000989.25","evm.model.tig00000989.25","No alias","(at4g31900 : 159.0) PICKLE RELATED 2 (PKR2); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), DEAD-like helicase, N-terminal (InterPro:IPR014001), Protein of unknown function DUF1086 (InterPro:IPR009462), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1). & (q7g8y3|isw2_orysa : 145.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: no original description)" "evm.model.tig00001000.12","evm.model.tig00001000.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00001001.23","evm.model.tig00001001.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00001027.20","evm.model.tig00001027.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00001056.6","evm.model.tig00001056.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00001057.3","evm.model.tig00001057.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00001086.41","evm.model.tig00001086.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00001094.29","evm.model.tig00001094.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00001222.9","evm.model.tig00001222.9","No alias"," no hits & (original description: no original description)" "evm.model.tig00001234.7","evm.model.tig00001234.7","No alias"," no hits & (original description: no original description)" "evm.model.tig00001373.2","evm.model.tig00001373.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00001532.2","evm.model.tig00001532.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00001532.6","evm.model.tig00001532.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.36","evm.model.tig00020538.36","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.37","evm.model.tig00020538.37","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.38","evm.model.tig00020538.38","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.39","evm.model.tig00020538.39","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.47","evm.model.tig00020538.47","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.153","evm.model.tig00020553.153","No alias","(at4g36480 : 286.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: no original description)" "evm.model.tig00020553.278","evm.model.tig00020553.278","No alias"," no hits & (original description: no original description)" "evm.model.tig00020554.6","evm.model.tig00020554.6","No alias","(at4g24840 : 137.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)" "evm.model.tig00020604.26","evm.model.tig00020604.26","No alias"," no hits & (original description: no original description)" "evm.model.tig00020610.58","evm.model.tig00020610.58","No alias","(at2g43370 : 94.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: U1 small nuclear ribonucleoprotein-70K (TAIR:AT3G50670.1); Has 272 Blast hits to 272 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description)" "evm.model.tig00020629.128","evm.model.tig00020629.128","No alias"," no hits & (original description: no original description)" "evm.model.tig00020660.37","evm.model.tig00020660.37","No alias","(at1g21410 : 88.6) AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.; SKP2A; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT1G77000.2); Has 8874 Blast hits to 3879 proteins in 263 species: Archae - 0; Bacteria - 386; Metazoa - 3510; Fungi - 1080; Plants - 2969; Viruses - 9; Other Eukaryotes - 920 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description)" "evm.model.tig00020703.34","evm.model.tig00020703.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00020703.35","evm.model.tig00020703.35","No alias","(at5g63220 : 137.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)" "evm.model.tig00020710.23","evm.model.tig00020710.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00020801.12","evm.model.tig00020801.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00020801.52","evm.model.tig00020801.52","No alias"," no hits & (original description: no original description)" "evm.model.tig00020824.40","evm.model.tig00020824.40","No alias"," no hits & (original description: no original description)" "evm.model.tig00020875.13","evm.model.tig00020875.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00020903.40","evm.model.tig00020903.40","No alias","(at1g01120 : 538.0) Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.; 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 1076.0) & (original description: no original description)" "evm.model.tig00020908.3","evm.model.tig00020908.3","No alias","(at1g67660 : 108.0) Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Putative phage-type endonuclease (InterPro:IPR017482), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G13810.1). & (reliability: 216.0) & (original description: no original description)" "evm.model.tig00020909.13","evm.model.tig00020909.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00020911.42","evm.model.tig00020911.42","No alias","(p12359|psbo_spiol : 137.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Spinacia oleracea (Spinach) & (at5g66570 : 129.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type.; PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)" "evm.model.tig00020944.29","evm.model.tig00020944.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00020952.47","evm.model.tig00020952.47","No alias"," no hits & (original description: no original description)" "evm.model.tig00020961.80","evm.model.tig00020961.80","No alias"," no hits & (original description: no original description)" "evm.model.tig00020996.28","evm.model.tig00020996.28","No alias","(at1g58350 : 91.3) ZW18; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G09980.1). & (reliability: 182.6) & (original description: no original description)" "evm.model.tig00021108.84","evm.model.tig00021108.84","No alias"," no hits & (original description: no original description)" "evm.model.tig00021144.10","evm.model.tig00021144.10","No alias"," no hits & (original description: no original description)" "evm.model.tig00021168.14","evm.model.tig00021168.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00021168.42","evm.model.tig00021168.42","No alias"," no hits & (original description: no original description)" "evm.model.tig00021217.4","evm.model.tig00021217.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00021254.40","evm.model.tig00021254.40","No alias"," no hits & (original description: no original description)" "evm.model.tig00021257.5","evm.model.tig00021257.5","No alias","(at2g39630 : 205.0) Encodes a putative dolichyl-phosphate β-glucosyltransferase.; Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G20575.1); Has 13322 Blast hits to 13314 proteins in 2299 species: Archae - 543; Bacteria - 9870; Metazoa - 265; Fungi - 258; Plants - 96; Viruses - 22; Other Eukaryotes - 2268 (source: NCBI BLink). & (reliability: 410.0) & (original description: no original description)" "evm.model.tig00021290.12","evm.model.tig00021290.12","No alias","(at1g80830 : 338.0) Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.; natural resistance-associated macrophage protein 1 (NRAMP1); CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 6 (TAIR:AT1G15960.1); Has 5566 Blast hits to 5511 proteins in 1695 species: Archae - 118; Bacteria - 4154; Metazoa - 357; Fungi - 273; Plants - 337; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description)" "evm.model.tig00021339.57","evm.model.tig00021339.57","No alias","(at4g39920 : 144.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)" "evm.model.tig00021348.39","evm.model.tig00021348.39","No alias","(q655r6|mocos_orysa : 187.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (at1g16540 : 166.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)" "evm.model.tig00021351.9","evm.model.tig00021351.9","No alias"," no hits & (original description: no original description)" "evm.model.tig00021434.50","evm.model.tig00021434.50","No alias","(at2g26830 : 167.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)" "evm.model.tig00021612.12","evm.model.tig00021612.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00021612.57","evm.model.tig00021612.57","No alias"," no hits & (original description: no original description)" "evm.model.tig00021745.23","evm.model.tig00021745.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00021745.25","evm.model.tig00021745.25","No alias"," no hits & (original description: no original description)"