"probe","sequence_id","alias","description"
"evm.model.tig00000042.25","evm.model.tig00000042.25","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000042.7","evm.model.tig00000042.7","No alias","(at1g66680 : 99.4) unknown function; AR401; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G60910.1); Has 1054 Blast hits to 1053 proteins in 391 species: Archae - 16; Bacteria - 384; Metazoa - 157; Fungi - 144; Plants - 125; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)"
"evm.model.tig00000042.86","evm.model.tig00000042.86","No alias","(at1g11890 : 209.0) member of SEC22 Gene Family; SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)"
"evm.model.tig00000053.12","evm.model.tig00000053.12","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000076.59","evm.model.tig00000076.59","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000093.179","evm.model.tig00000093.179","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000237.12","evm.model.tig00000237.12","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000241.165","evm.model.tig00000241.165","No alias","(at3g10220 : 152.0) Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.; tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)"
"evm.model.tig00000310.43","evm.model.tig00000310.43","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000383.29","evm.model.tig00000383.29","No alias","(at1g54140 : 131.0) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)"
"evm.model.tig00000383.94","evm.model.tig00000383.94","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000388.14","evm.model.tig00000388.14","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000388.62","evm.model.tig00000388.62","No alias","(at1g30630 : 251.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT2G34840.1); Has 442 Blast hits to 442 proteins in 180 species: Archae - 6; Bacteria - 14; Metazoa - 175; Fungi - 90; Plants - 92; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)"
"evm.model.tig00000403.54","evm.model.tig00000403.54","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000444.11","evm.model.tig00000444.11","No alias","(q94hl5|t2ag_orysa : 100.0) Transcription initiation factor IIA gamma chain (TFIIA-gamma) - Oryza sativa (Rice) & (at4g24440 : 99.4) transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S); FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIA complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIA, gamma subunit (InterPro:IPR003194), Transcription factor IIA, beta-barrel (InterPro:IPR009088), Transcription initiation factor IIA, gamma subunit, N-terminal (InterPro:IPR015872), Transcription initiation factor IIA, gamma subunit, C-terminal (InterPro:IPR015871), Transcription factor IIA, helical (InterPro:IPR009083); Has 553 Blast hits to 553 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 162; Plants - 188; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)"
"evm.model.tig00000470.1","evm.model.tig00000470.1","No alias","(at4g31160 : 91.3) Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.; DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)"
"evm.model.tig00000480.14","evm.model.tig00000480.14","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000480.34","evm.model.tig00000480.34","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000605.33","evm.model.tig00000605.33","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000615.17","evm.model.tig00000615.17","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000718.48","evm.model.tig00000718.48","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000792.30","evm.model.tig00000792.30","No alias","(at2g37680 : 141.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)"
"evm.model.tig00000796.18","evm.model.tig00000796.18","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000889.22","evm.model.tig00000889.22","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000889.4","evm.model.tig00000889.4","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000903.17","evm.model.tig00000903.17","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000903.20","evm.model.tig00000903.20","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000939.13","evm.model.tig00000939.13","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000940.21","evm.model.tig00000940.21","No alias","(at3g07930 : 88.6) DNA glycosylase superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), HhH-GPD domain (InterPro:IPR003265); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)"
"evm.model.tig00000949.12","evm.model.tig00000949.12","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000989.8","evm.model.tig00000989.8","No alias","(at2g18390 : 199.0) Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.  Mutant has abnormal mitosis and cell cycle control during seed development.; TITAN 5 (TTN5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 10006 Blast hits to 10000 proteins in 420 species: Archae - 13; Bacteria - 39; Metazoa - 4544; Fungi - 1627; Plants - 1505; Viruses - 3; Other Eukaryotes - 2275 (source: NCBI BLink). & (p49076|arf_maize : 150.0) ADP-ribosylation factor - Zea mays (Maize) & (reliability: 398.0) &  (original description: no original description)"
"evm.model.tig00001021.6","evm.model.tig00001021.6","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001038.24","evm.model.tig00001038.24","No alias","(at1g02090 : 149.0) encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.; FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)"
"evm.model.tig00001093.15","evm.model.tig00001093.15","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001095.25","evm.model.tig00001095.25","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001208.12","evm.model.tig00001208.12","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001231.1","evm.model.tig00001231.1","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001234.13","evm.model.tig00001234.13","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001249.11","evm.model.tig00001249.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001292.24","evm.model.tig00001292.24","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001307.4","evm.model.tig00001307.4","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001355.11","evm.model.tig00001355.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001366.7","evm.model.tig00001366.7","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001424.10","evm.model.tig00001424.10","No alias","(at5g14100 : 123.0) member of NAP subfamily; non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)"
"evm.model.tig00001532.8","evm.model.tig00001532.8","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020528.10","evm.model.tig00020528.10","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020531.47","evm.model.tig00020531.47","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020538.61","evm.model.tig00020538.61","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020553.164","evm.model.tig00020553.164","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020556.12","evm.model.tig00020556.12","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020675.80","evm.model.tig00020675.80","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020684.51","evm.model.tig00020684.51","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020723.11","evm.model.tig00020723.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020723.77","evm.model.tig00020723.77","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020754.4","evm.model.tig00020754.4","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020816.26","evm.model.tig00020816.26","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020848.31","evm.model.tig00020848.31","No alias","(at4g35740 : 260.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)"
"evm.model.tig00020902.45","evm.model.tig00020902.45","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020902.47","evm.model.tig00020902.47","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020912.48","evm.model.tig00020912.48","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020912.97","evm.model.tig00020912.97","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020934.4","evm.model.tig00020934.4","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020961.99","evm.model.tig00020961.99","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021035.6","evm.model.tig00021035.6","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021096.5","evm.model.tig00021096.5","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021275.16","evm.model.tig00021275.16","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021348.86","evm.model.tig00021348.86","No alias","(q41009|toc34_pea : 112.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (at1g02280 : 102.0) Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo.; translocon at the outer envelope membrane of chloroplasts 33 (TOC33); FUNCTIONS IN: protein binding, GTP binding, GTPase activity, protein homodimerization activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 34 (TAIR:AT5G05000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)"
"evm.model.tig00021464.34","evm.model.tig00021464.34","No alias","(at5g38890 : 167.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Exosome complex, component CSL4 (InterPro:IPR019495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)"
"evm.model.tig00021502.3","evm.model.tig00021502.3","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021569.16","evm.model.tig00021569.16","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021571.32","evm.model.tig00021571.32","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021612.34","evm.model.tig00021612.34","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021682.8","evm.model.tig00021682.8","No alias","(at5g44200 : 99.8) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.; CAP-binding protein 20 (CBP20); FUNCTIONS IN: RNA binding, RNA cap binding; INVOLVED IN: RNA metabolic process, RNA splicing, via endonucleolytic cleavage and ligation, primary microRNA processing; LOCATED IN: mRNA cap binding complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G46020.1); Has 9575 Blast hits to 9549 proteins in 2190 species: Archae - 96; Bacteria - 7682; Metazoa - 239; Fungi - 361; Plants - 280; Viruses - 2; Other Eukaryotes - 915 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)"