"probe","sequence_id","alias","description" "evm.model.tig00000025.57","evm.model.tig00000025.57","No alias"," no hits & (original description: no original description)" "evm.model.tig00000042.168","evm.model.tig00000042.168","No alias"," no hits & (original description: no original description)" "evm.model.tig00000042.175","evm.model.tig00000042.175","No alias"," no hits & (original description: no original description)" "evm.model.tig00000076.12","evm.model.tig00000076.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.100","evm.model.tig00000093.100","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.101","evm.model.tig00000093.101","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.106","evm.model.tig00000093.106","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.111","evm.model.tig00000093.111","No alias","(at5g09230 : 112.0) Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 2 (SRT2); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: chromatin silencing, defense response to bacterium, negative regulation of defense response, regulation of transcription, DNA-dependent; LOCATED IN: chromatin silencing complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 1 (TAIR:AT5G55760.1); Has 6471 Blast hits to 6454 proteins in 2013 species: Archae - 152; Bacteria - 3779; Metazoa - 822; Fungi - 681; Plants - 106; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)" "evm.model.tig00000093.194","evm.model.tig00000093.194","No alias","(q42808|tbp_soybn : 85.9) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Glycine max (Soybean) & (at3g13445 : 84.3) TBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex; TATA binding protein 1 (TBP1); FUNCTIONS IN: RNA polymerase II transcription factor activity, binding, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 2 (TAIR:AT1G55520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)" "evm.model.tig00000093.211","evm.model.tig00000093.211","No alias"," no hits & (original description: no original description)" "evm.model.tig00000113.75","evm.model.tig00000113.75","No alias","(at4g33140 : 143.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5'(3')-deoxyribonucleotidase (InterPro:IPR010708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)" "evm.model.tig00000145.2","evm.model.tig00000145.2","No alias","(p38661|pdia6_medsa : 106.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 103.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)" "evm.model.tig00000145.50","evm.model.tig00000145.50","No alias"," no hits & (original description: no original description)" "evm.model.tig00000157.87","evm.model.tig00000157.87","No alias"," no hits & (original description: no original description)" "evm.model.tig00000178.24","evm.model.tig00000178.24","No alias"," no hits & (original description: no original description)" "evm.model.tig00000178.70","evm.model.tig00000178.70","No alias"," no hits & (original description: no original description)" "evm.model.tig00000189.36","evm.model.tig00000189.36","No alias"," no hits & (original description: no original description)" "evm.model.tig00000190.14","evm.model.tig00000190.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00000215.9","evm.model.tig00000215.9","No alias"," no hits & (original description: no original description)" "evm.model.tig00000219.31","evm.model.tig00000219.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00000219.77","evm.model.tig00000219.77","No alias"," no hits & (original description: no original description)" "evm.model.tig00000227.2","evm.model.tig00000227.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00000227.30","evm.model.tig00000227.30","No alias"," no hits & (original description: no original description)" "evm.model.tig00000241.107","evm.model.tig00000241.107","No alias","(at2g27490 : 114.0) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.; ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)" "evm.model.tig00000241.36","evm.model.tig00000241.36","No alias","(at3g03420 : 154.0) Ku70-binding family protein; CONTAINS InterPro DOMAIN/s: Peptidase M76, ATP23 (InterPro:IPR019165); Has 337 Blast hits to 337 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 144; Plants - 46; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)" "evm.model.tig00000246.17","evm.model.tig00000246.17","No alias"," no hits & (original description: no original description)" "evm.model.tig00000248.65","evm.model.tig00000248.65","No alias","(at1g25682 : 230.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT1G25988.1); Has 717 Blast hits to 715 proteins in 213 species: Archae - 0; Bacteria - 6; Metazoa - 235; Fungi - 232; Plants - 115; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)" "evm.model.tig00000254.70","evm.model.tig00000254.70","No alias"," no hits & (original description: no original description)" "evm.model.tig00000254.87","evm.model.tig00000254.87","No alias"," no hits & (original description: no original description)" "evm.model.tig00000269.65","evm.model.tig00000269.65","No alias"," no hits & (original description: no original description)" "evm.model.tig00000269.87","evm.model.tig00000269.87","No alias"," no hits & (original description: no original description)" "evm.model.tig00000310.36","evm.model.tig00000310.36","No alias"," no hits & (original description: no original description)" "evm.model.tig00000325.6","evm.model.tig00000325.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00000331.9","evm.model.tig00000331.9","No alias","(at3g48420 : 159.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)" "evm.model.tig00000381.2","evm.model.tig00000381.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00000381.3","evm.model.tig00000381.3","No alias","(q08435|pma1_nicpl : 293.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g62670 : 291.0) H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink). & (reliability: 582.0) & (original description: no original description)" "evm.model.tig00000385.8","evm.model.tig00000385.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00000391.19","evm.model.tig00000391.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00000396.30","evm.model.tig00000396.30","No alias"," no hits & (original description: no original description)" "evm.model.tig00000396.31","evm.model.tig00000396.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00000396.34","evm.model.tig00000396.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00000403.43","evm.model.tig00000403.43","No alias"," no hits & (original description: no original description)" "evm.model.tig00000403.44","evm.model.tig00000403.44","No alias"," no hits & (original description: no original description)" "evm.model.tig00000430.28","evm.model.tig00000430.28","No alias"," no hits & (original description: no original description)" "evm.model.tig00000441.32","evm.model.tig00000441.32","No alias"," no hits & (original description: no original description)" "evm.model.tig00000444.23","evm.model.tig00000444.23","No alias"," no hits & (original description: no original description)" "evm.model.tig00000459.101","evm.model.tig00000459.101","No alias"," no hits & (original description: no original description)" "evm.model.tig00000459.102","evm.model.tig00000459.102","No alias","(at1g79750 : 209.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (p37223|maox_mescr : 206.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 418.0) & (original description: no original description)" "evm.model.tig00000488.5","evm.model.tig00000488.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00000523.11","evm.model.tig00000523.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00000525.3","evm.model.tig00000525.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00000553.28","evm.model.tig00000553.28","No alias","(at3g18790 : 177.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)" "evm.model.tig00000581.3","evm.model.tig00000581.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00000586.11","evm.model.tig00000586.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00000605.36","evm.model.tig00000605.36","No alias","(at3g13220 : 253.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (q7pc80|pdr1_orysa : 169.0) Probable pleiotropic drug resistance protein 1 - Oryza sativa (Rice) & (reliability: 506.0) & (original description: no original description)" "evm.model.tig00000615.62","evm.model.tig00000615.62","No alias","(at1g30130 : 82.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description)" "evm.model.tig00000704.18","evm.model.tig00000704.18","No alias"," no hits & (original description: no original description)" "evm.model.tig00000711.34","evm.model.tig00000711.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00000711.56","evm.model.tig00000711.56","No alias"," no hits & (original description: no original description)" "evm.model.tig00000737.21","evm.model.tig00000737.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00000769.15","evm.model.tig00000769.15","No alias","(at1g61620 : 103.0) phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Nitric oxide synthase-interacting (InterPro:IPR016818), Zinc finger, RING-type (InterPro:IPR001841); Has 510 Blast hits to 510 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 129; Plants - 138; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)" "evm.model.tig00000788.29","evm.model.tig00000788.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00000792.67","evm.model.tig00000792.67","No alias"," no hits & (original description: no original description)" "evm.model.tig00000802.25","evm.model.tig00000802.25","No alias"," no hits & (original description: no original description)" "evm.model.tig00000829.2","evm.model.tig00000829.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00000903.6","evm.model.tig00000903.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00000912.35","evm.model.tig00000912.35","No alias"," no hits & (original description: no original description)" "evm.model.tig00001001.27","evm.model.tig00001001.27","No alias"," no hits & (original description: no original description)" "evm.model.tig00001027.8","evm.model.tig00001027.8","No alias"," no hits & (original description: no original description)" "evm.model.tig00001029.27","evm.model.tig00001029.27","No alias"," no hits & (original description: no original description)" "evm.model.tig00001056.15","evm.model.tig00001056.15","No alias"," no hits & (original description: no original description)" "evm.model.tig00001085.18","evm.model.tig00001085.18","No alias"," no hits & (original description: no original description)" "evm.model.tig00001098.20","evm.model.tig00001098.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00001130.25","evm.model.tig00001130.25","No alias"," no hits & (original description: no original description)" "evm.model.tig00001181.13","evm.model.tig00001181.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00001181.3","evm.model.tig00001181.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00001214.10","evm.model.tig00001214.10","No alias"," no hits & (original description: no original description)" "evm.model.tig00001214.12","evm.model.tig00001214.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00001264.16","evm.model.tig00001264.16","No alias","(at5g58020 : 125.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)" "evm.model.tig00001265.9","evm.model.tig00001265.9","No alias"," no hits & (original description: no original description)" "evm.model.tig00001284.15","evm.model.tig00001284.15","No alias","(at1g55810 : 215.0) One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.; uridine kinase-like 3 (UKL3); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 4 (TAIR:AT4G26510.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93394|upp_tobac : 81.3) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (reliability: 430.0) & (original description: no original description)" "evm.model.tig00001424.12","evm.model.tig00001424.12","No alias","(at1g02330 : 89.4) CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)" "evm.model.tig00001527.6","evm.model.tig00001527.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00001542.20","evm.model.tig00001542.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00001576.1","evm.model.tig00001576.1","No alias"," no hits & (original description: no original description)" "evm.model.tig00020510.99","evm.model.tig00020510.99","No alias"," no hits & (original description: no original description)" "evm.model.tig00020538.35","evm.model.tig00020538.35","No alias","(at5g13520 : 214.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) & (original description: no original description)" "evm.model.tig00020553.230","evm.model.tig00020553.230","No alias"," no hits & (original description: no original description)" "evm.model.tig00020554.71","evm.model.tig00020554.71","No alias","(at4g02080 : 82.4) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 81.6) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (reliability: 164.8) & (original description: no original description)" "evm.model.tig00020556.91","evm.model.tig00020556.91","No alias","(at1g53390 : 148.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 358264 Blast hits to 329272 proteins in 3990 species: Archae - 6355; Bacteria - 285632; Metazoa - 9572; Fungi - 6250; Plants - 5450; Viruses - 13; Other Eukaryotes - 44992 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 118.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 296.0) & (original description: no original description)" "evm.model.tig00020563.117","evm.model.tig00020563.117","No alias"," no hits & (original description: no original description)" "evm.model.tig00020563.7","evm.model.tig00020563.7","No alias","(at5g35410 : 142.0) encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition; SALT OVERLY SENSITIVE 2 (SOS2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 8 (TAIR:AT4G24400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 131.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 284.0) & (original description: no original description)" "evm.model.tig00020603.17","evm.model.tig00020603.17","No alias"," no hits & (original description: no original description)" "evm.model.tig00020603.76","evm.model.tig00020603.76","No alias"," no hits & (original description: no original description)" "evm.model.tig00020610.14","evm.model.tig00020610.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00020610.142","evm.model.tig00020610.142","No alias"," no hits & (original description: no original description)" "evm.model.tig00020611.2","evm.model.tig00020611.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00020616.36","evm.model.tig00020616.36","No alias"," no hits & (original description: no original description)" "evm.model.tig00020616.42","evm.model.tig00020616.42","No alias"," no hits & (original description: no original description)" "evm.model.tig00020661.3","evm.model.tig00020661.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00020675.105","evm.model.tig00020675.105","No alias"," no hits & (original description: no original description)" "evm.model.tig00020684.20","evm.model.tig00020684.20","No alias","(at1g60420 : 163.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)" "evm.model.tig00020684.44","evm.model.tig00020684.44","No alias"," no hits & (original description: no original description)" "evm.model.tig00020704.31","evm.model.tig00020704.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00020704.63","evm.model.tig00020704.63","No alias"," no hits & (original description: no original description)" "evm.model.tig00020723.99","evm.model.tig00020723.99","No alias"," no hits & (original description: no original description)" "evm.model.tig00020812.5","evm.model.tig00020812.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00020816.35","evm.model.tig00020816.35","No alias"," no hits & (original description: no original description)" "evm.model.tig00020816.59","evm.model.tig00020816.59","No alias"," no hits & (original description: no original description)" "evm.model.tig00020825.18","evm.model.tig00020825.18","No alias"," no hits & (original description: no original description)" "evm.model.tig00020848.18","evm.model.tig00020848.18","No alias","(at1g28560 : 108.0) Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation.; SHOOT REDIFFERENTIATION DEFECTIVE 2 (SRD2); FUNCTIONS IN: DNA binding; INVOLVED IN: snRNA transcription, organ morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: snRNA-activating protein complex, subunit 3, C-terminal (InterPro:IPR022042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)" "evm.model.tig00020848.24","evm.model.tig00020848.24","No alias"," no hits & (original description: no original description)" "evm.model.tig00020849.14","evm.model.tig00020849.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00020892.20","evm.model.tig00020892.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00020902.57","evm.model.tig00020902.57","No alias"," no hits & (original description: no original description)" "evm.model.tig00020902.78","evm.model.tig00020902.78","No alias","(at3g19490 : 163.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)" "evm.model.tig00020911.39","evm.model.tig00020911.39","No alias"," no hits & (original description: no original description)" "evm.model.tig00020911.66","evm.model.tig00020911.66","No alias","(at3g56960 : 83.2) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidyl inositol monophosphate 5 kinase 4 (PIP5K4); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 27454 Blast hits to 7705 proteins in 602 species: Archae - 2; Bacteria - 4208; Metazoa - 4073; Fungi - 443; Plants - 2320; Viruses - 0; Other Eukaryotes - 16408 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)" "evm.model.tig00020918.1","evm.model.tig00020918.1","No alias","(at5g37290 : 82.4) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)" "evm.model.tig00020918.2","evm.model.tig00020918.2","No alias","(at5g61150 : 95.5) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description)" "evm.model.tig00020927.42","evm.model.tig00020927.42","No alias"," no hits & (original description: no original description)" "evm.model.tig00021015.17","evm.model.tig00021015.17","No alias"," no hits & (original description: no original description)" "evm.model.tig00021036.111","evm.model.tig00021036.111","No alias"," no hits & (original description: no original description)" "evm.model.tig00021036.112","evm.model.tig00021036.112","No alias"," no hits & (original description: no original description)" "evm.model.tig00021070.59","evm.model.tig00021070.59","No alias"," no hits & (original description: no original description)" "evm.model.tig00021072.12","evm.model.tig00021072.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00021073.26","evm.model.tig00021073.26","No alias"," no hits & (original description: no original description)" "evm.model.tig00021073.27","evm.model.tig00021073.27","No alias"," no hits & (original description: no original description)" "evm.model.tig00021073.55","evm.model.tig00021073.55","No alias"," no hits & (original description: no original description)" "evm.model.tig00021123.32","evm.model.tig00021123.32","No alias","(at5g46420 : 101.0) 16S rRNA processing protein RimM family; FUNCTIONS IN: ribosome binding, nucleotidyltransferase activity; INVOLVED IN: metabolic process, rRNA processing, ribosome biogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PRC-barrel (InterPro:IPR007903), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618), RimM protein (InterPro:IPR002676), 16S rRNA processing protein RimM (InterPro:IPR011961); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)" "evm.model.tig00021127.31","evm.model.tig00021127.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00021179.19","evm.model.tig00021179.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00021179.35","evm.model.tig00021179.35","No alias"," no hits & (original description: no original description)" "evm.model.tig00021238.14","evm.model.tig00021238.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00021312.10","evm.model.tig00021312.10","No alias"," no hits & (original description: no original description)" "evm.model.tig00021348.24","evm.model.tig00021348.24","No alias"," no hits & (original description: no original description)" "evm.model.tig00021348.97","evm.model.tig00021348.97","No alias"," no hits & (original description: no original description)" "evm.model.tig00021352.50","evm.model.tig00021352.50","No alias","(at3g28430 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)" "evm.model.tig00021357.39","evm.model.tig00021357.39","No alias"," no hits & (original description: no original description)" "evm.model.tig00021366.14","evm.model.tig00021366.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00021435.7","evm.model.tig00021435.7","No alias"," no hits & (original description: no original description)" "evm.model.tig00021441.4","evm.model.tig00021441.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00021464.14","evm.model.tig00021464.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00021489.4","evm.model.tig00021489.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00021501.5","evm.model.tig00021501.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00021518.33","evm.model.tig00021518.33","No alias"," no hits & (original description: no original description)" "evm.model.tig00021525.5","evm.model.tig00021525.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00021537.13","evm.model.tig00021537.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00021537.61","evm.model.tig00021537.61","No alias","(at4g16440 : 81.3) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)" "evm.model.tig00021537.64","evm.model.tig00021537.64","No alias","(at4g24520 : 84.7) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (reliability: 169.4) & (original description: no original description)" "evm.model.tig00021621.3","evm.model.tig00021621.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00022075.84","evm.model.tig00022075.84","No alias"," no hits & (original description: no original description)"