"probe","sequence_id","alias","description" "evm.model.tig00000042.63","evm.model.tig00000042.63","No alias"," no hits & (original description: no original description)" "evm.model.tig00000057.102","evm.model.tig00000057.102","No alias"," no hits & (original description: no original description)" "evm.model.tig00000057.48","evm.model.tig00000057.48","No alias","(at2g41500 : 309.0) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (p93107|pf20_chlre : 97.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 618.0) & (original description: no original description)" "evm.model.tig00000076.140","evm.model.tig00000076.140","No alias"," no hits & (original description: no original description)" "evm.model.tig00000076.151","evm.model.tig00000076.151","No alias","(at4g38260 : 128.0) Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)" "evm.model.tig00000076.2","evm.model.tig00000076.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.205","evm.model.tig00000093.205","No alias"," no hits & (original description: no original description)" "evm.model.tig00000093.6","evm.model.tig00000093.6","No alias","(at1g66750 : 206.0) CDK-activating kinase 4 (CAK4); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, kinase activity; INVOLVED IN: regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 124001 Blast hits to 122583 proteins in 4490 species: Archae - 94; Bacteria - 13930; Metazoa - 46186; Fungi - 12564; Plants - 30685; Viruses - 410; Other Eukaryotes - 20132 (source: NCBI BLink). & (p29620|kc47_orysa : 200.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 412.0) & (original description: no original description)" "evm.model.tig00000093.85","evm.model.tig00000093.85","No alias","(p16868|h2b4_volca : 140.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at5g59910 : 135.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)" "evm.model.tig00000133.41","evm.model.tig00000133.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00000135.2","evm.model.tig00000135.2","No alias","(at2g45990 : 133.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) & (original description: no original description)" "evm.model.tig00000144.175","evm.model.tig00000144.175","No alias","(at1g35190 : 153.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (q8rvf5|gaox2_orysa : 100.0) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description)" "evm.model.tig00000144.69","evm.model.tig00000144.69","No alias"," no hits & (original description: no original description)" "evm.model.tig00000144.78","evm.model.tig00000144.78","No alias"," no hits & (original description: no original description)" "evm.model.tig00000169.35","evm.model.tig00000169.35","No alias","(at3g20810 : 93.6) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description)" "evm.model.tig00000190.28","evm.model.tig00000190.28","No alias"," no hits & (original description: no original description)" "evm.model.tig00000204.113","evm.model.tig00000204.113","No alias"," no hits & (original description: no original description)" "evm.model.tig00000219.95","evm.model.tig00000219.95","No alias"," no hits & (original description: no original description)" "evm.model.tig00000237.49","evm.model.tig00000237.49","No alias","(at3g15290 : 155.0) 3-hydroxyacyl-CoA dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase (InterPro:IPR022694); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 14531 Blast hits to 13544 proteins in 1840 species: Archae - 475; Bacteria - 9128; Metazoa - 588; Fungi - 237; Plants - 152; Viruses - 0; Other Eukaryotes - 3951 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)" "evm.model.tig00000241.185","evm.model.tig00000241.185","No alias"," no hits & (original description: no original description)" "evm.model.tig00000241.196","evm.model.tig00000241.196","No alias"," no hits & (original description: no original description)" "evm.model.tig00000269.118","evm.model.tig00000269.118","No alias"," no hits & (original description: no original description)" "evm.model.tig00000293.13","evm.model.tig00000293.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00000317.5","evm.model.tig00000317.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00000342.21","evm.model.tig00000342.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00000350.12","evm.model.tig00000350.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00000382.36","evm.model.tig00000382.36","No alias"," no hits & (original description: no original description)" "evm.model.tig00000383.100","evm.model.tig00000383.100","No alias"," no hits & (original description: no original description)" "evm.model.tig00000383.86","evm.model.tig00000383.86","No alias"," no hits & (original description: no original description)" "evm.model.tig00000383.95","evm.model.tig00000383.95","No alias"," no hits & (original description: no original description)" "evm.model.tig00000388.64","evm.model.tig00000388.64","No alias"," no hits & (original description: no original description)" "evm.model.tig00000402.48","evm.model.tig00000402.48","No alias"," no hits & (original description: no original description)" "evm.model.tig00000448.90","evm.model.tig00000448.90","No alias","(at5g46840 : 96.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)" "evm.model.tig00000449.5","evm.model.tig00000449.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00000514.12","evm.model.tig00000514.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00000545.29","evm.model.tig00000545.29","No alias","(at3g55800 : 127.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (p46285|s17p_wheat : 120.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Triticum aestivum (Wheat) & (reliability: 254.0) & (original description: no original description)" "evm.model.tig00000551.11","evm.model.tig00000551.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00000553.43","evm.model.tig00000553.43","No alias"," no hits & (original description: no original description)" "evm.model.tig00000571.41","evm.model.tig00000571.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00000600.7","evm.model.tig00000600.7","No alias"," no hits & (original description: no original description)" "evm.model.tig00000615.32","evm.model.tig00000615.32","No alias"," no hits & (original description: no original description)" "evm.model.tig00000626.6","evm.model.tig00000626.6","No alias","(at5g47810 : 137.0) phosphofructokinase 2 (PFK2); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)" "evm.model.tig00000655.58","evm.model.tig00000655.58","No alias","(at4g09980 : 124.0) EMBRYO DEFECTIVE 1691 (EMB1691); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); BEST Arabidopsis thaliana protein match is: mRNAadenosine methylase (TAIR:AT4G10760.1); Has 29929 Blast hits to 18009 proteins in 1024 species: Archae - 39; Bacteria - 4517; Metazoa - 16101; Fungi - 2453; Plants - 1900; Viruses - 259; Other Eukaryotes - 4660 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)" "evm.model.tig00000655.59","evm.model.tig00000655.59","No alias"," no hits & (original description: no original description)" "evm.model.tig00000743.35","evm.model.tig00000743.35","No alias","(p36841|nia_volca : 243.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Volvox carteri & (at1g77760 : 232.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 464.0) & (original description: no original description)" "evm.model.tig00000792.22","evm.model.tig00000792.22","No alias"," no hits & (original description: no original description)" "evm.model.tig00000792.60","evm.model.tig00000792.60","No alias"," no hits & (original description: no original description)" "evm.model.tig00000802.49","evm.model.tig00000802.49","No alias"," no hits & (original description: no original description)" "evm.model.tig00000806.54","evm.model.tig00000806.54","No alias"," no hits & (original description: no original description)" "evm.model.tig00000857.13","evm.model.tig00000857.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00000903.2","evm.model.tig00000903.2","No alias","(at2g15290 : 80.1) Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.; translocon at inner membrane of chloroplasts 21 (TIC21); FUNCTIONS IN: copper uptake transmembrane transporter activity, protein homodimerization activity, iron ion transmembrane transporter activity; INVOLVED IN: protein import into chloroplast stroma, cellular metal ion homeostasis; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3611 (InterPro:IPR022051); Has 312 Blast hits to 312 proteins in 84 species: Archae - 0; Bacteria - 154; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)" "evm.model.tig00000949.39","evm.model.tig00000949.39","No alias"," no hits & (original description: no original description)" "evm.model.tig00000989.14","evm.model.tig00000989.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00000989.28","evm.model.tig00000989.28","No alias"," no hits & (original description: no original description)" "evm.model.tig00001000.6","evm.model.tig00001000.6","No alias"," no hits & (original description: no original description)" "evm.model.tig00001029.22","evm.model.tig00001029.22","No alias"," no hits & (original description: no original description)" "evm.model.tig00001033.13","evm.model.tig00001033.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00001094.24","evm.model.tig00001094.24","No alias"," no hits & (original description: no original description)" "evm.model.tig00001095.27","evm.model.tig00001095.27","No alias"," no hits & (original description: no original description)" "evm.model.tig00001095.31","evm.model.tig00001095.31","No alias"," no hits & (original description: no original description)" "evm.model.tig00001095.4","evm.model.tig00001095.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00001126.13","evm.model.tig00001126.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00001126.19","evm.model.tig00001126.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00001154.34","evm.model.tig00001154.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00001181.12","evm.model.tig00001181.12","No alias"," no hits & (original description: no original description)" "evm.model.tig00001215.3","evm.model.tig00001215.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00001229.5","evm.model.tig00001229.5","No alias"," no hits & (original description: no original description)" "evm.model.tig00001234.14","evm.model.tig00001234.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00001264.13","evm.model.tig00001264.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00001286.14","evm.model.tig00001286.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00001339.7","evm.model.tig00001339.7","No alias","(q84ui5|mpk1_orysa : 181.0) Mitogen-activated protein kinase 1 (EC 2.7.11.24) (MAP kinase 1) (MAP kinase 6) (OsMAPK6) (OsSIPK) - Oryza sativa (Rice) & (at3g45640 : 170.0) Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.; mitogen-activated protein kinase 3 (MPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 6 (TAIR:AT2G43790.1); Has 124285 Blast hits to 122929 proteins in 4636 species: Archae - 100; Bacteria - 13249; Metazoa - 47024; Fungi - 12588; Plants - 30092; Viruses - 485; Other Eukaryotes - 20747 (source: NCBI BLink). & (reliability: 340.0) & (original description: no original description)" "evm.model.tig00001371.21","evm.model.tig00001371.21","No alias","(at4g22720 : 240.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)" "evm.model.tig00001376.15","evm.model.tig00001376.15","No alias"," no hits & (original description: no original description)" "evm.model.tig00001471.8","evm.model.tig00001471.8","No alias","(at3g55070 : 234.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 813 Blast hits to 810 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 347; Fungi - 254; Plants - 147; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 468.0) & (original description: no original description)" "evm.model.tig00001527.2","evm.model.tig00001527.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00001600.4","evm.model.tig00001600.4","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.174","evm.model.tig00020553.174","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.175","evm.model.tig00020553.175","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.194","evm.model.tig00020553.194","No alias"," no hits & (original description: no original description)" "evm.model.tig00020553.280","evm.model.tig00020553.280","No alias","(at4g27745 : 145.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8s5m8|yipl_orysa : 142.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (reliability: 268.0) & (original description: no original description)" "evm.model.tig00020554.149","evm.model.tig00020554.149","No alias"," no hits & (original description: no original description)" "evm.model.tig00020554.93","evm.model.tig00020554.93","No alias"," no hits & (original description: no original description)" "evm.model.tig00020560.14","evm.model.tig00020560.14","No alias"," no hits & (original description: no original description)" "evm.model.tig00020560.32","evm.model.tig00020560.32","No alias"," no hits & (original description: no original description)" "evm.model.tig00020572.21","evm.model.tig00020572.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00020603.74","evm.model.tig00020603.74","No alias"," no hits & (original description: no original description)" "evm.model.tig00020610.122","evm.model.tig00020610.122","No alias"," no hits & (original description: no original description)" "evm.model.tig00020614.67","evm.model.tig00020614.67","No alias","(at5g10050 : 92.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description)" "evm.model.tig00020614.83","evm.model.tig00020614.83","No alias"," no hits & (original description: no original description)" "evm.model.tig00020685.11","evm.model.tig00020685.11","No alias"," no hits & (original description: no original description)" "evm.model.tig00020693.32","evm.model.tig00020693.32","No alias"," no hits & (original description: no original description)" "evm.model.tig00020704.19","evm.model.tig00020704.19","No alias"," no hits & (original description: no original description)" "evm.model.tig00020710.66","evm.model.tig00020710.66","No alias"," no hits & (original description: no original description)" "evm.model.tig00020830.29","evm.model.tig00020830.29","No alias"," no hits & (original description: no original description)" "evm.model.tig00020875.7","evm.model.tig00020875.7","No alias"," no hits & (original description: no original description)" "evm.model.tig00020902.111","evm.model.tig00020902.111","No alias"," no hits & (original description: no original description)" "evm.model.tig00020930.16","evm.model.tig00020930.16","No alias","(at5g63290 : 176.0) Radical SAM superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity; INVOLVED IN: oxidation reduction, porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Putative oxygen-independent coproporphyrinogen III oxidase (InterPro:IPR004559), HemN, C-terminal (InterPro:IPR010723), Radical SAM (InterPro:IPR007197); Has 10146 Blast hits to 10146 proteins in 2456 species: Archae - 113; Bacteria - 8401; Metazoa - 78; Fungi - 4; Plants - 37; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)" "evm.model.tig00020952.45","evm.model.tig00020952.45","No alias"," no hits & (original description: no original description)" "evm.model.tig00020961.36","evm.model.tig00020961.36","No alias","(at4g32770 : 309.0) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.; VITAMIN E DEFICIENT 1 (VTE1); FUNCTIONS IN: tocopherol cyclase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, plastoglobule, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q94fy8|tocc_maize : 268.0) Probable tocopherol cyclase, chloroplast precursor (Sucrose export defective 1) - Zea mays (Maize) & (reliability: 618.0) & (original description: no original description)" "evm.model.tig00020961.41","evm.model.tig00020961.41","No alias"," no hits & (original description: no original description)" "evm.model.tig00020961.49","evm.model.tig00020961.49","No alias"," no hits & (original description: no original description)" "evm.model.tig00021015.21","evm.model.tig00021015.21","No alias"," no hits & (original description: no original description)" "evm.model.tig00021070.20","evm.model.tig00021070.20","No alias"," no hits & (original description: no original description)" "evm.model.tig00021098.29","evm.model.tig00021098.29","No alias","(at1g08410 : 109.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)" "evm.model.tig00021105.48","evm.model.tig00021105.48","No alias"," no hits & (original description: no original description)" "evm.model.tig00021127.130","evm.model.tig00021127.130","No alias"," no hits & (original description: no original description)" "evm.model.tig00021127.70","evm.model.tig00021127.70","No alias","(at5g39040 : 163.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 150.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 326.0) & (original description: no original description)" "evm.model.tig00021127.93","evm.model.tig00021127.93","No alias","(at5g47430 : 197.0) DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891); BEST Arabidopsis thaliana protein match is: DWNN domain, a CCHC-type zinc finger (TAIR:AT4G17410.1). & (reliability: 394.0) & (original description: no original description)" "evm.model.tig00021135.13","evm.model.tig00021135.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00021168.59","evm.model.tig00021168.59","No alias","(at3g19970 : 81.3) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)" "evm.model.tig00021181.3","evm.model.tig00021181.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00021238.22","evm.model.tig00021238.22","No alias"," no hits & (original description: no original description)" "evm.model.tig00021244.34","evm.model.tig00021244.34","No alias"," no hits & (original description: no original description)" "evm.model.tig00021312.57","evm.model.tig00021312.57","No alias"," no hits & (original description: no original description)" "evm.model.tig00021339.50","evm.model.tig00021339.50","No alias"," no hits & (original description: no original description)" "evm.model.tig00021489.17","evm.model.tig00021489.17","No alias","(at1g09300 : 166.0) Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)" "evm.model.tig00021489.33","evm.model.tig00021489.33","No alias"," no hits & (original description: no original description)" "evm.model.tig00021493.32","evm.model.tig00021493.32","No alias","(at5g60230 : 88.2) putative subunit of tRNA splicing endonuclease; splicing endonuclease 2 (SEN2); CONTAINS InterPro DOMAIN/s: tRNA intron endonuclease, catalytic domain-like (InterPro:IPR006677), tRNA-intron endonuclease (InterPro:IPR006676), Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal (InterPro:IPR011856), tRNA intron endonuclease, N-terminal (InterPro:IPR006678); BEST Arabidopsis thaliana protein match is: splicing endonuclease 1 (TAIR:AT3G45590.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z6b1|sen2_orysa : 84.7) Probable tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9) (tRNA-intron endonuclease Sen2) - Oryza sativa (Rice) & (reliability: 176.4) & (original description: no original description)" "evm.model.tig00021493.33","evm.model.tig00021493.33","No alias"," no hits & (original description: no original description)" "evm.model.tig00021531.2","evm.model.tig00021531.2","No alias"," no hits & (original description: no original description)" "evm.model.tig00021571.13","evm.model.tig00021571.13","No alias"," no hits & (original description: no original description)" "evm.model.tig00021582.25","evm.model.tig00021582.25","No alias"," no hits & (original description: no original description)" "evm.model.tig00021589.8","evm.model.tig00021589.8","No alias","(at5g17990 : 229.0) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.; tryptophan biosynthesis 1 (TRP1); FUNCTIONS IN: anthranilate phosphoribosyltransferase activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Anthranilate phosphoribosyl transferase (InterPro:IPR005940), Glycosyl transferase, family 3 (InterPro:IPR000312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)" "evm.model.tig00021687.3","evm.model.tig00021687.3","No alias"," no hits & (original description: no original description)" "evm.model.tig00021728.10","evm.model.tig00021728.10","No alias"," no hits & (original description: no original description)" "evm.model.tig00022075.37","evm.model.tig00022075.37","No alias"," no hits & (original description: no original description)" "evm.model.tig00022075.43","evm.model.tig00022075.43","No alias"," no hits & (original description: no original description)"