"probe","sequence_id","alias","description"
"evm.model.tig00000093.144","evm.model.tig00000093.144","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000147.73","evm.model.tig00000147.73","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000197.8","evm.model.tig00000197.8","No alias","(at5g63110 : 161.0) RPD3-like histone deacetylase.  HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (p56521|hdac_maize : 134.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 322.0) &  (original description: no original description)"
"evm.model.tig00000241.133","evm.model.tig00000241.133","No alias","(at3g20290 : 117.0) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)"
"evm.model.tig00000241.25","evm.model.tig00000241.25","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000254.14","evm.model.tig00000254.14","No alias","(at4g32420 : 90.1) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3). & (reliability: 180.2) &  (original description: no original description)"
"evm.model.tig00000361.6","evm.model.tig00000361.6","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000402.68","evm.model.tig00000402.68","No alias","(at5g44740 : 94.7) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)"
"evm.model.tig00000430.21","evm.model.tig00000430.21","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000430.70","evm.model.tig00000430.70","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000459.65","evm.model.tig00000459.65","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000459.96","evm.model.tig00000459.96","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000470.3","evm.model.tig00000470.3","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000640.17","evm.model.tig00000640.17","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000711.36","evm.model.tig00000711.36","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000880.3","evm.model.tig00000880.3","No alias"," no hits & (original description: no original description)"
"evm.model.tig00000981.33","evm.model.tig00000981.33","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001049.11","evm.model.tig00001049.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001208.20","evm.model.tig00001208.20","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001229.4","evm.model.tig00001229.4","No alias","(at5g09860 : 97.1) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors.  Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: production of ta-siRNAs involved in RNA interference, gene silencing by RNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunit THOC1 (InterPro:IPR021861). & (reliability: 194.2) &  (original description: no original description)"
"evm.model.tig00001299.1","evm.model.tig00001299.1","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001302.2","evm.model.tig00001302.2","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001310.3","evm.model.tig00001310.3","No alias","(at3g49650 : 143.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18550.1); Has 11521 Blast hits to 10970 proteins in 399 species: Archae - 16; Bacteria - 121; Metazoa - 4988; Fungi - 1461; Plants - 1855; Viruses - 76; Other Eukaryotes - 3004 (source: NCBI BLink). & (p46869|fla10_chlre : 107.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 286.0) &  (original description: no original description)"
"evm.model.tig00001343.3","evm.model.tig00001343.3","No alias","(at4g17140 : 125.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 250.0) &  (original description: no original description)"
"evm.model.tig00001366.8","evm.model.tig00001366.8","No alias"," no hits & (original description: no original description)"
"evm.model.tig00001537.13","evm.model.tig00001537.13","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020515.6","evm.model.tig00020515.6","No alias","(at4g24160 : 114.0) Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels.; alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)"
"evm.model.tig00020537.44","evm.model.tig00020537.44","No alias","(at2g47210 : 140.0) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)"
"evm.model.tig00020537.47","evm.model.tig00020537.47","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020537.66","evm.model.tig00020537.66","No alias","(at5g40820 : 318.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 304.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 636.0) &  (original description: no original description)"
"evm.model.tig00020538.7","evm.model.tig00020538.7","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020563.88","evm.model.tig00020563.88","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020572.41","evm.model.tig00020572.41","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020610.130","evm.model.tig00020610.130","No alias","(at1g43190 : 385.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (reliability: 770.0) &  (original description: no original description)"
"evm.model.tig00020616.21","evm.model.tig00020616.21","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020616.22","evm.model.tig00020616.22","No alias","(at1g27320 : 135.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o49230|etr1_braol : 129.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 270.0) &  (original description: no original description)"
"evm.model.tig00020629.108","evm.model.tig00020629.108","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020734.20","evm.model.tig00020734.20","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020800.16","evm.model.tig00020800.16","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020902.22","evm.model.tig00020902.22","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020911.47","evm.model.tig00020911.47","No alias","(at1g04080 : 141.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (reliability: 282.0) &  (original description: no original description)"
"evm.model.tig00020927.32","evm.model.tig00020927.32","No alias","(at2g47590 : 108.0) photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,; photolyase/blue-light receptor 2 (PHR2); FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 4854 Blast hits to 4851 proteins in 1205 species: Archae - 82; Bacteria - 2283; Metazoa - 348; Fungi - 105; Plants - 417; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (q651u1|cryd_orysa : 87.4) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 216.0) &  (original description: no original description)"
"evm.model.tig00020943.51","evm.model.tig00020943.51","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020943.88","evm.model.tig00020943.88","No alias","(q9mbf8|dyh1b_chlre : 669.0) Dynein-1-beta heavy chain, flagellar inner arm I1 complex (1-beta DHC) (Dynein-1, subspecies f) - Chlamydomonas reinhardtii & (at2g40570 : 194.0) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)"
"evm.model.tig00020943.89","evm.model.tig00020943.89","No alias"," (original description: no original description)"
"evm.model.tig00020944.19","evm.model.tig00020944.19","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020944.27","evm.model.tig00020944.27","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020951.34","evm.model.tig00020951.34","No alias"," no hits & (original description: no original description)"
"evm.model.tig00020961.141","evm.model.tig00020961.141","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021012.11","evm.model.tig00021012.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021017.9","evm.model.tig00021017.9","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021036.1","evm.model.tig00021036.1","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021043.11","evm.model.tig00021043.11","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021070.66","evm.model.tig00021070.66","No alias","(at5g60930 : 249.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46869|fla10_chlre : 191.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 498.0) &  (original description: no original description)"
"evm.model.tig00021122.8","evm.model.tig00021122.8","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021127.19","evm.model.tig00021127.19","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021312.62","evm.model.tig00021312.62","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021314.16","evm.model.tig00021314.16","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021433.9","evm.model.tig00021433.9","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021493.59","evm.model.tig00021493.59","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021589.38","evm.model.tig00021589.38","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021623.7","evm.model.tig00021623.7","No alias"," no hits & (original description: no original description)"
"evm.model.tig00021680.18","evm.model.tig00021680.18","No alias"," no hits & (original description: no original description)"
"evm.model.tig00022075.94","evm.model.tig00022075.94","No alias"," no hits & (original description: no original description)"