Coexpression cluster: Cluster_23 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 3.8% (6/158) 5.65 0.0 0.0
GO:0015979 photosynthesis 3.8% (6/158) 5.72 0.0 0.0
GO:0009521 photosystem 3.16% (5/158) 5.54 0.0 8e-06
GO:0051188 cofactor biosynthetic process 3.8% (6/158) 4.39 0.0 4.1e-05
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.53% (4/158) 5.69 1e-06 6.7e-05
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.53% (4/158) 5.14 4e-06 0.000251
GO:0009108 coenzyme biosynthetic process 3.16% (5/158) 4.39 4e-06 0.000262
GO:0019359 nicotinamide nucleotide biosynthetic process 2.53% (4/158) 4.8 1.2e-05 0.000471
GO:0019363 pyridine nucleotide biosynthetic process 2.53% (4/158) 4.8 1.2e-05 0.000471
GO:0051186 cofactor metabolic process 3.8% (6/158) 3.61 1e-05 0.000494
GO:0072525 pyridine-containing compound biosynthetic process 2.53% (4/158) 4.74 1.4e-05 0.000507
GO:0072524 pyridine-containing compound metabolic process 2.53% (4/158) 4.53 2.6e-05 0.000571
GO:1901566 organonitrogen compound biosynthetic process 6.33% (10/158) 2.38 2.5e-05 0.000578
GO:0046496 nicotinamide nucleotide metabolic process 2.53% (4/158) 4.58 2.2e-05 0.000594
GO:0006733 oxidoreduction coenzyme metabolic process 2.53% (4/158) 4.58 2.2e-05 0.000594
GO:0019362 pyridine nucleotide metabolic process 2.53% (4/158) 4.58 2.2e-05 0.000594
GO:0009654 photosystem II oxygen evolving complex 1.9% (3/158) 5.65 2.4e-05 0.000603
GO:0006732 coenzyme metabolic process 3.16% (5/158) 3.8 3e-05 0.000625
GO:0009523 photosystem II 1.9% (3/158) 5.51 3.3e-05 0.000661
GO:0008152 metabolic process 29.11% (46/158) 0.87 2.1e-05 0.000696
GO:1990204 oxidoreductase complex 1.9% (3/158) 5.16 7.3e-05 0.00137
GO:0044283 small molecule biosynthetic process 3.8% (6/158) 3.06 8.6e-05 0.001554
GO:0071949 FAD binding 1.9% (3/158) 4.97 0.000111 0.001907
GO:1901293 nucleoside phosphate biosynthetic process 2.53% (4/158) 3.89 0.000151 0.002395
GO:0009165 nucleotide biosynthetic process 2.53% (4/158) 3.89 0.000151 0.002395
GO:0006096 glycolytic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0006757 ATP generation from ADP 1.9% (3/158) 4.58 0.000257 0.002613
GO:0009179 purine ribonucleoside diphosphate metabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0009166 nucleotide catabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0006165 nucleoside diphosphate phosphorylation 1.9% (3/158) 4.58 0.000257 0.002613
GO:0046031 ADP metabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0009132 nucleoside diphosphate metabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0042866 pyruvate biosynthetic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0009135 purine nucleoside diphosphate metabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0046939 nucleotide phosphorylation 1.9% (3/158) 4.58 0.000257 0.002613
GO:0009185 ribonucleoside diphosphate metabolic process 1.9% (3/158) 4.58 0.000257 0.002613
GO:0016053 organic acid biosynthetic process 3.16% (5/158) 3.12 0.000282 0.002727
GO:0046394 carboxylic acid biosynthetic process 3.16% (5/158) 3.12 0.000282 0.002727
GO:0018130 heterocycle biosynthetic process 3.8% (6/158) 2.74 0.000292 0.002751
GO:0019438 aromatic compound biosynthetic process 3.8% (6/158) 2.72 0.000313 0.002885
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 1.27% (2/158) 6.06 0.000351 0.002955
GO:0004618 phosphoglycerate kinase activity 1.27% (2/158) 6.06 0.000351 0.002955
GO:0017144 drug metabolic process 3.16% (5/158) 3.06 0.000341 0.003002
GO:0006090 pyruvate metabolic process 1.9% (3/158) 4.45 0.00034 0.003058
GO:0044281 small molecule metabolic process 5.06% (8/158) 2.33 0.000208 0.00316
GO:0016491 oxidoreductase activity 12.66% (20/158) 1.28 0.000225 0.003304
GO:0055114 oxidation-reduction process 12.03% (19/158) 1.25 0.000416 0.003432
GO:0098796 membrane protein complex 3.16% (5/158) 3.17 0.000243 0.003444
GO:1901292 nucleoside phosphate catabolic process 1.9% (3/158) 4.33 0.000437 0.003534
GO:0034404 nucleobase-containing small molecule biosynthetic process 1.9% (3/158) 4.27 0.000492 0.003899
GO:0006082 organic acid metabolic process 3.8% (6/158) 2.55 0.000585 0.004215
GO:0043436 oxoacid metabolic process 3.8% (6/158) 2.56 0.000568 0.004241
GO:0008150 biological_process 35.44% (56/158) 0.58 0.000557 0.004241
GO:0009058 biosynthetic process 7.59% (12/158) 1.62 0.000581 0.004259
GO:0019752 carboxylic acid metabolic process 3.8% (6/158) 2.57 0.00055 0.004273
GO:0046434 organophosphate catabolic process 1.9% (3/158) 4.16 0.000615 0.004348
GO:0090407 organophosphate biosynthetic process 2.53% (4/158) 3.3 0.000743 0.004903
GO:0009522 photosystem I 1.27% (2/158) 5.58 0.000731 0.004905
GO:0009064 glutamine family amino acid metabolic process 1.27% (2/158) 5.58 0.000731 0.004905
GO:0009084 glutamine family amino acid biosynthetic process 1.27% (2/158) 5.58 0.000731 0.004905
GO:0009117 nucleotide metabolic process 2.53% (4/158) 3.28 0.000785 0.005096
GO:1901362 organic cyclic compound biosynthetic process 3.8% (6/158) 2.46 0.000811 0.005179
GO:0009152 purine ribonucleotide biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009144 purine nucleoside triphosphate metabolic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0016052 carbohydrate catabolic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009260 ribonucleotide biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0046390 ribose phosphate biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009124 nucleoside monophosphate biosynthetic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0009199 ribonucleoside triphosphate metabolic process 1.9% (3/158) 3.88 0.001094 0.005219
GO:0006091 generation of precursor metabolites and energy 1.9% (3/158) 4.02 0.000833 0.005233
GO:0009142 nucleoside triphosphate biosynthetic process 1.9% (3/158) 3.97 0.000915 0.005327
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.9% (3/158) 3.97 0.000915 0.005327
GO:0006754 ATP biosynthetic process 1.9% (3/158) 3.97 0.000915 0.005327
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.9% (3/158) 3.97 0.000915 0.005327
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.9% (3/158) 3.97 0.000915 0.005327
GO:0009123 nucleoside monophosphate metabolic process 1.9% (3/158) 3.84 0.001191 0.005422
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.9% (3/158) 3.84 0.001191 0.005422
GO:0009126 purine nucleoside monophosphate metabolic process 1.9% (3/158) 3.84 0.001191 0.005422
GO:0009161 ribonucleoside monophosphate metabolic process 1.9% (3/158) 3.84 0.001191 0.005422
GO:0006753 nucleoside phosphate metabolic process 2.53% (4/158) 3.2 0.00097 0.005568
GO:0034655 nucleobase-containing compound catabolic process 1.9% (3/158) 3.93 0.001002 0.005587
GO:0046034 ATP metabolic process 1.9% (3/158) 3.93 0.001002 0.005587
GO:0044271 cellular nitrogen compound biosynthetic process 5.06% (8/158) 1.97 0.001065 0.005858
GO:0019439 aromatic compound catabolic process 1.9% (3/158) 3.72 0.001515 0.006523
GO:0046700 heterocycle catabolic process 1.9% (3/158) 3.72 0.001515 0.006523
GO:0009141 nucleoside triphosphate metabolic process 1.9% (3/158) 3.72 0.001515 0.006523
GO:1901361 organic cyclic compound catabolic process 1.9% (3/158) 3.72 0.001515 0.006523
GO:0044270 cellular nitrogen compound catabolic process 1.9% (3/158) 3.72 0.001515 0.006523
GO:0006164 purine nucleotide biosynthetic process 1.9% (3/158) 3.69 0.001635 0.006886
GO:1901137 carbohydrate derivative biosynthetic process 1.9% (3/158) 3.69 0.001635 0.006886
GO:0072522 purine-containing compound biosynthetic process 1.9% (3/158) 3.65 0.001759 0.007334
GO:0055086 nucleobase-containing small molecule metabolic process 2.53% (4/158) 2.94 0.00186 0.007594
GO:0044237 cellular metabolic process 15.82% (25/158) 0.9 0.00185 0.007631
GO:0044249 cellular biosynthetic process 6.33% (10/158) 1.58 0.001999 0.008076
GO:0050662 coenzyme binding 4.43% (7/158) 1.93 0.002599 0.010396
GO:0043168 anion binding 12.66% (20/158) 0.97 0.003092 0.012244
GO:1901576 organic substance biosynthetic process 6.33% (10/158) 1.49 0.003167 0.012418
GO:0072330 monocarboxylic acid biosynthetic process 1.9% (3/158) 3.33 0.003342 0.012973
GO:0036094 small molecule binding 12.66% (20/158) 0.95 0.003571 0.013728
GO:0003824 catalytic activity 29.11% (46/158) 0.54 0.003831 0.014586
GO:0016836 hydro-lyase activity 1.27% (2/158) 4.39 0.004031 0.015203
GO:0009150 purine ribonucleotide metabolic process 1.9% (3/158) 3.22 0.004156 0.01538
GO:0009259 ribonucleotide metabolic process 1.9% (3/158) 3.22 0.004156 0.01538
GO:0034654 nucleobase-containing compound biosynthetic process 2.53% (4/158) 2.58 0.004627 0.016966
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.63% (1/158) 7.39 0.005976 0.018346
GO:0016851 magnesium chelatase activity 0.63% (1/158) 7.39 0.005976 0.018346
GO:0042651 thylakoid membrane 0.63% (1/158) 7.39 0.005976 0.018346
GO:0015995 chlorophyll biosynthetic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0051002 ligase activity, forming nitrogen-metal bonds 0.63% (1/158) 7.39 0.005976 0.018346
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 0.63% (1/158) 7.39 0.005976 0.018346
GO:0034357 photosynthetic membrane 0.63% (1/158) 7.39 0.005976 0.018346
GO:0034312 diol biosynthetic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0006729 tetrahydrobiopterin biosynthetic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 0.63% (1/158) 7.39 0.005976 0.018346
GO:0046146 tetrahydrobiopterin metabolic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0006741 NADP biosynthetic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0009512 cytochrome b6f complex 0.63% (1/158) 7.39 0.005976 0.018346
GO:0034311 diol metabolic process 0.63% (1/158) 7.39 0.005976 0.018346
GO:0003951 NAD+ kinase activity 0.63% (1/158) 7.39 0.005976 0.018346
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 0.63% (1/158) 7.39 0.005976 0.018346
GO:0006163 purine nucleotide metabolic process 1.9% (3/158) 3.09 0.00533 0.019014
GO:0016874 ligase activity 1.9% (3/158) 3.09 0.00533 0.019014
GO:0019637 organophosphate metabolic process 2.53% (4/158) 2.53 0.005238 0.019028
GO:0072521 purine-containing compound metabolic process 1.9% (3/158) 3.06 0.005586 0.019575
GO:0019693 ribose phosphate metabolic process 1.9% (3/158) 3.06 0.005586 0.019575
GO:0009987 cellular process 17.09% (27/158) 0.72 0.006579 0.02004
GO:1902494 catalytic complex 1.9% (3/158) 2.95 0.006977 0.021091
GO:0032787 monocarboxylic acid metabolic process 1.9% (3/158) 2.91 0.007586 0.022758
GO:0034641 cellular nitrogen compound metabolic process 5.7% (9/158) 1.37 0.00859 0.025576
GO:0046483 heterocycle metabolic process 4.43% (7/158) 1.6 0.008728 0.025794
GO:0044425 membrane part 5.7% (9/158) 1.35 0.009147 0.026832
GO:0006725 cellular aromatic compound metabolic process 4.43% (7/158) 1.58 0.00945 0.027517
GO:0048037 cofactor binding 7.59% (12/158) 1.12 0.009566 0.027651
GO:0000166 nucleotide binding 11.39% (18/158) 0.86 0.010174 0.028983
GO:1901265 nucleoside phosphate binding 11.39% (18/158) 0.86 0.010174 0.028983
GO:1901360 organic cyclic compound metabolic process 4.43% (7/158) 1.53 0.011304 0.031974
GO:0070069 cytochrome complex 0.63% (1/158) 6.39 0.011917 0.032104
GO:0006536 glutamate metabolic process 0.63% (1/158) 6.39 0.011917 0.032104
GO:0015930 glutamate synthase activity 0.63% (1/158) 6.39 0.011917 0.032104
GO:0006537 glutamate biosynthetic process 0.63% (1/158) 6.39 0.011917 0.032104
GO:0046422 violaxanthin de-epoxidase activity 0.63% (1/158) 6.39 0.011917 0.032104
GO:0043650 dicarboxylic acid biosynthetic process 0.63% (1/158) 6.39 0.011917 0.032104
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 0.63% (1/158) 6.39 0.011917 0.032104
GO:0006520 cellular amino acid metabolic process 1.9% (3/158) 2.61 0.013144 0.035169
GO:0008144 drug binding 8.86% (14/158) 0.95 0.014488 0.038248
GO:0016829 lyase activity 2.53% (4/158) 2.1 0.014468 0.038452
GO:0003674 molecular_function 45.57% (72/158) 0.31 0.01508 0.039548
GO:0046165 alcohol biosynthetic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0043648 dicarboxylic acid metabolic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0004089 carbonate dehydratase activity 0.63% (1/158) 5.8 0.017823 0.04439
GO:0042559 pteridine-containing compound biosynthetic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0006542 glutamine biosynthetic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0006541 glutamine metabolic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0046173 polyol biosynthetic process 0.63% (1/158) 5.8 0.017823 0.04439
GO:0016854 racemase and epimerase activity 0.63% (1/158) 5.8 0.017823 0.04439
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (158) (download table)

InterPro Domains

GO Terms

Family Terms