"sequence_id","alias","species","description","type"
"2225","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 2","protein_coding"
"2719","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 8","protein_coding"
"420048","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 19","protein_coding"
"A4A49_00134","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 20","protein_coding"
"A4A49_01885","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 25","protein_coding"
"A4A49_07781","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 16","protein_coding"
"A4A49_12839","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 15","protein_coding"
"A4A49_13453","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 19","protein_coding"
"A4A49_34889","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 20","protein_coding"
"A4A49_40487","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 23","protein_coding"
"At1g17110","No alias","Arabidopsis thaliana","Ubiquitin-specific protease 15 [Source:UniProtKB/TrEMBL;Acc:F4I642]","protein_coding"
"At2g24640","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA1]","protein_coding"
"At3g14400","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS2]","protein_coding"
"At4g17895","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS7]","protein_coding"
"At4g24560","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB51]","protein_coding"
"At4g31670","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q67XW5]","protein_coding"
"At5g46740","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]","protein_coding"
"At5g57990","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS4]","protein_coding"
"At5g65450","No alias","Arabidopsis thaliana","ubiquitin-specific protease 17 [Source:TAIR;Acc:AT5G65450]","protein_coding"
"Bradi1g31187","No alias","Brachypodium distachyon","ubiquitin-specific protease 19","protein_coding"
"Bradi1g47320","No alias","Brachypodium distachyon","ubiquitin-specific protease 23","protein_coding"
"Bradi2g20280","No alias","Brachypodium distachyon","ubiquitin-specific protease 25","protein_coding"
"Bradi3g09260","No alias","Brachypodium distachyon","ubiquitin-specific protease 15","protein_coding"
"Bradi3g34174","No alias","Brachypodium distachyon","ubiquitin-specific protease 23","protein_coding"
"Bradi3g34176","No alias","Brachypodium distachyon","ubiquitin-specific protease 23","protein_coding"
"Bradi3g38400","No alias","Brachypodium distachyon","ubiquitin-specific protease 17","protein_coding"
"Bradi3g52210","No alias","Brachypodium distachyon","ubiquitin-specific protease 21","protein_coding"
"Bradi3g54040","No alias","Brachypodium distachyon","ubiquitin-specific protease 23","protein_coding"
"Bradi4g32500","No alias","Brachypodium distachyon","ubiquitin-specific protease 16","protein_coding"
"Brara.A00606.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.A01462.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.B01178.1","No alias","Brassica rapa","deubiquitinase *(UBP23)","protein_coding"
"Brara.C01163.1","No alias","Brassica rapa","deubiquitinase *(UBP23)","protein_coding"
"Brara.D01485.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.E02682.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01198.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.F02412.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.F03603.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00910.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02485.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.I04463.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.J01197.1","No alias","Brassica rapa","deubiquitinase *(UBP23)","protein_coding"
"Brara.K00479.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01494.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.K01859.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre06.g248950","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 18","protein_coding"
"Cre06.g265150","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 8","protein_coding"
"Cre14.g629300","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 23","protein_coding"
"evm.model.contig_2104.16","No alias","Porphyridium purpureum","(at5g57990 : 199.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000403.102","No alias","Cyanophora paradoxa","(at5g10790 : 120.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 22 (UBP22); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000663.67","No alias","Cyanophora paradoxa","(at1g17110 : 279.0) Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.; ubiquitin-specific protease 15 (UBP15); CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.8","No alias","Cyanophora paradoxa","(at5g57990 : 175.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000734.7","No alias","Cyanophora paradoxa","(at5g57990 : 155.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000808.46","No alias","Cyanophora paradoxa","(at2g14120 : 241.0) Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.; dynamin related protein (DRP3B); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: post-embryonic development, peroxisome fission, mitochondrial fission; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin-related protein 3A (TAIR:AT4G33650.1); Has 2998 Blast hits to 2775 proteins in 332 species: Archae - 0; Bacteria - 6; Metazoa - 1280; Fungi - 797; Plants - 522; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020918.7","No alias","Cyanophora paradoxa","(at4g17895 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Glyma.01G018300","No alias","Glycine max","ubiquitin-specific protease 20","protein_coding"
"Glyma.01G023900","No alias","Glycine max","ubiquitin-specific protease 17","protein_coding"
"Glyma.02G040900","No alias","Glycine max","ubiquitin-specific protease 17","protein_coding"
"Glyma.02G203500","No alias","Glycine max","ubiquitin-specific protease 23","protein_coding"
"Glyma.02G213400","No alias","Glycine max","ubiquitin-specific protease 17","protein_coding"
"Glyma.04G058300","No alias","Glycine max","ubiquitin-specific protease 19","protein_coding"
"Glyma.04G091700","No alias","Glycine max","ubiquitin-specific protease 16","protein_coding"
"Glyma.06G059000","No alias","Glycine max","ubiquitin-specific protease 19","protein_coding"
"Glyma.06G093500","No alias","Glycine max","ubiquitin-specific protease 16","protein_coding"
"Glyma.06G286400","No alias","Glycine max","ubiquitin-specific protease 15","protein_coding"
"Glyma.08G175500","No alias","Glycine max","ubiquitin-specific protease 25","protein_coding"
"Glyma.09G204600","No alias","Glycine max","ubiquitin-specific protease 20","protein_coding"
"Glyma.13G259700","No alias","Glycine max","ubiquitin-specific protease 15","protein_coding"
"Glyma.14G105700","No alias","Glycine max","ubiquitin-specific protease 19","protein_coding"
"Glyma.14G181100","No alias","Glycine max","ubiquitin-specific protease 17","protein_coding"
"Glyma.15G248200","No alias","Glycine max","ubiquitin-specific protease 15","protein_coding"
"Glyma.15G251100","No alias","Glycine max","ubiquitin-specific protease 25","protein_coding"
"Glyma.17G074200","No alias","Glycine max","ubiquitin-specific protease 23","protein_coding"
"Glyma.17G220700","No alias","Glycine max","ubiquitin-specific protease 19","protein_coding"
"GRMZM2G000404","No alias","Zea mays","ubiquitin-specific protease 16","protein_coding"
"GRMZM2G003576","No alias","Zea mays","ubiquitin-specific protease 16","protein_coding"
"GRMZM2G007156","No alias","Zea mays","ubiquitin-specific protease 17","protein_coding"
"GRMZM2G016323","No alias","Zea mays","ubiquitin-specific protease 23","protein_coding"
"GRMZM2G060327","No alias","Zea mays","ubiquitin-specific protease 25","protein_coding"
"GRMZM2G091069","No alias","Zea mays","ubiquitin-specific protease 21","protein_coding"
"GRMZM2G116314","No alias","Zea mays","ubiquitin-specific protease 15","protein_coding"
"GRMZM2G120076","No alias","Zea mays","ubiquitin-specific protease 21","protein_coding"
"GRMZM2G126447","No alias","Zea mays","ubiquitin-specific protease 15","protein_coding"
"GRMZM2G136443","No alias","Zea mays","ubiquitin-specific protease 17","protein_coding"
"GRMZM2G305271","No alias","Zea mays","ubiquitin-specific protease 16","protein_coding"
"GRMZM2G305426","No alias","Zea mays","ubiquitin-specific protease 16","protein_coding"
"GRMZM2G319998","No alias","Zea mays","ubiquitin-specific protease 25","protein_coding"
"GRMZM2G386851","No alias","Zea mays","ubiquitin-specific protease 25","protein_coding"
"GRMZM2G388987","No alias","Zea mays","ubiquitin-specific protease 19","protein_coding"
"GRMZM2G447056","No alias","Zea mays","ubiquitin-specific protease 23","protein_coding"
"HORVU1Hr1G050530.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G077630.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G069620.26","No alias","Hordeum vulgare","deubiquitinase *(UBP15-21)","protein_coding"
"HORVU6Hr1G043690.16","No alias","Hordeum vulgare","regulatory deubiquitinase *(UBP15) & deubiquitinase *(UBP15-21)","protein_coding"
"HORVU6Hr1G067180.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G030300.1","No alias","Hordeum vulgare","deubiquitinase *(UBP23)","protein_coding"
"HORVU7Hr1G064340.3","No alias","Hordeum vulgare","deubiquitinase *(UBP15-21)","protein_coding"
"HORVU7Hr1G111430.5","No alias","Hordeum vulgare","deubiquitinase *(UBP15-21)","protein_coding"
"Kfl00030_0470","kfl00030_0470_v1.1","Klebsormidium nitens","(at3g14400 : 269.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 25 (UBP25); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0; Bacteria - 9; Metazoa - 4447; Fungi - 1449; Plants - 1041; Viruses - 9; Other Eukaryotes - 1704 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"Kfl00042_0090","kfl00042_0090_v1.1, kfl00042_0090_v1.1","Klebsormidium nitens","(at1g32850 : 120.0) ubiquitin-specific protease 11 (UBP11); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase,  DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1); Has 11311 Blast hits to 7509 proteins in 254 species: Archae - 0; Bacteria - 6; Metazoa - 5825; Fungi - 2000; Plants - 1417; Viruses - 8; Other Eukaryotes - 2055 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"Kfl00068_0060","kfl00068_0060_v1.1","Klebsormidium nitens","(at2g24640 : 462.0) ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"Kfl00390_0020","kfl00390_0020_v1.1","Klebsormidium nitens","(at5g57990 : 320.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"LOC_Os02g14730","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase family protein, expressed","protein_coding"
"LOC_Os02g46650","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os02g55180","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os05g43480","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os06g08530","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os06g44380","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase family protein, expressed","protein_coding"
"LOC_Os08g37350","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase family protein, expressed","protein_coding"
"LOC_Os09g28940","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"MA_10429414g0020","No alias","Picea abies","(at4g31670 : 528.0) ubiquitin-specific protease 18 (UBP18); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.1); Has 9064 Blast hits to 8065 proteins in 324 species: Archae - 2; Bacteria - 451; Metazoa - 4433; Fungi - 1481; Plants - 999; Viruses - 9; Other Eukaryotes - 1689 (source: NCBI BLink). & (reliability: 1056.0) &  (original description: no original description)","protein_coding"
"MA_10431488g0010","No alias","Picea abies","(at5g57990 : 470.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 940.0) &  (original description: no original description)","protein_coding"
"MA_127745g0010","No alias","Picea abies","(at5g57990 : 238.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"MA_132593g0020","No alias","Picea abies","(at5g57990 : 134.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"MA_223125g0010","No alias","Picea abies","(at1g17110 : 190.0) Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.; ubiquitin-specific protease 15 (UBP15); CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"MA_2660871g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_53569g0010","No alias","Picea abies","(at5g57990 : 312.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 624.0) &  (original description: no original description)","protein_coding"
"MA_834843g0010","No alias","Picea abies","(at4g17895 : 166.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"MA_842793g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"Mp1g03220.1","No alias","Marchantia polymorpha","Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana (sp|q9fps2|ubp25_arath : 331.0)","protein_coding"
"Mp2g05560.1","No alias","Marchantia polymorpha","deubiquitinase (UBP15-21)","protein_coding"
"Mp3g16110.1","No alias","Marchantia polymorpha","deubiquitinase (UBP23)","protein_coding"
"Mp7g13030.1","No alias","Marchantia polymorpha","deubiquitinase (UBP5|8-11)","protein_coding"
"Potri.001G142000","No alias","Populus trichocarpa","ubiquitin-specific protease 21","protein_coding"
"Potri.001G378900","No alias","Populus trichocarpa","ubiquitin-specific protease 15","protein_coding"
"Potri.001G394600","No alias","Populus trichocarpa","ubiquitin-specific protease 25","protein_coding"
"Potri.002G104800","No alias","Populus trichocarpa","ubiquitin-specific protease 16","protein_coding"
"Potri.003G092400","No alias","Populus trichocarpa","ubiquitin-specific protease 21","protein_coding"
"Potri.005G156900","No alias","Populus trichocarpa","ubiquitin-specific protease 16","protein_coding"
"Potri.006G185200","No alias","Populus trichocarpa","ubiquitin-specific protease 23","protein_coding"
"Potri.006G270600","No alias","Populus trichocarpa","ubiquitin-specific protease 19","protein_coding"
"Potri.011G095200","No alias","Populus trichocarpa","ubiquitin-specific protease 15","protein_coding"
"Potri.011G112800","No alias","Populus trichocarpa","ubiquitin-specific protease 25","protein_coding"
"Potri.018G009500","No alias","Populus trichocarpa","ubiquitin-specific protease 19","protein_coding"
"Potri.018G011200","No alias","Populus trichocarpa","ubiquitin-specific protease 19","protein_coding"
"Potri.018G107500","No alias","Populus trichocarpa","ubiquitin-specific protease 23","protein_coding"
"Pp1s136_13V6","No alias","Physcomitrella patens","F28M20.140; ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s154_12V6","No alias","Physcomitrella patens","F28M20.140; ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s180_64V6","No alias","Physcomitrella patens","F28M20.140; ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s235_73V6","No alias","Physcomitrella patens","ubiquitin specific peptidase 42","protein_coding"
"Pp1s31_245V6","No alias","Physcomitrella patens","F28M20.140; ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s37_238V6","No alias","Physcomitrella patens","ubiquitin specific peptidase 42","protein_coding"
"Pp1s42_21V6","No alias","Physcomitrella patens","ubiquitin specific peptidase 36","protein_coding"
"PSME_00004268-RA","No alias","Pseudotsuga menziesii","(at4g17895 : 259.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00004345-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 289.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"PSME_00004619-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 105.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"PSME_00006638-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 170.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00012734-RA","No alias","Pseudotsuga menziesii","(at2g24640 : 170.0) ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00023662-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 292.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 584.0) &  (original description: no original description)","protein_coding"
"PSME_00025066-RA","No alias","Pseudotsuga menziesii","(at4g02050 : 355.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (q10710|sta_ricco : 348.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"PSME_00027792-RA","No alias","Pseudotsuga menziesii","(at2g24640 : 536.0) ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1). & (reliability: 1072.0) &  (original description: no original description)","protein_coding"
"PSME_00028951-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 150.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00031848-RA","No alias","Pseudotsuga menziesii","(at4g17895 : 107.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00034135-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 441.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 882.0) &  (original description: no original description)","protein_coding"
"PSME_00036644-RA","No alias","Pseudotsuga menziesii","(at5g65450 : 389.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 17 (UBP17); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 16 (TAIR:AT4G24560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"PSME_00043331-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 140.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00051684-RA","No alias","Pseudotsuga menziesii","(at4g17895 : 154.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"Seita.1G020500.1","No alias","Setaria italica ","regulatory deubiquitinase *(UBP15) & deubiquitinase *(UBP15-21)","protein_coding"
"Seita.1G280200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G350200.1","No alias","Setaria italica ","deubiquitinase *(UBP23)","protein_coding"
"Seita.2G235700.1","No alias","Setaria italica ","deubiquitinase *(UBP15-21)","protein_coding"
"Seita.3G183900.1","No alias","Setaria italica ","deubiquitinase *(UBP25)","protein_coding"
"Seita.4G049200.1","No alias","Setaria italica ","deubiquitinase *(UBP23)","protein_coding"
"Seita.4G192800.1","No alias","Setaria italica ","deubiquitinase *(UBP15-21)","protein_coding"
"Seita.6G185200.1","No alias","Setaria italica ","deubiquitinase *(UBP15-21)","protein_coding"
"Seita.9G310900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G287900.6","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G230400.3","No alias","Sorghum bicolor ","deubiquitinase *(UBP15-21)","protein_coding"
"Sobic.004G107200.2","No alias","Sorghum bicolor ","regulatory deubiquitinase *(UBP15) & deubiquitinase *(UBP15-21)","protein_coding"
"Sobic.004G274900.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G159900.2","No alias","Sorghum bicolor ","deubiquitinase *(UBP15-21)","protein_coding"
"Sobic.009G115000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G192300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G065800.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP23)","protein_coding"
"Sobic.010G213500.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP15-21)","protein_coding"
"Solyc02g005600","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U6X5_MEDTR)","protein_coding"
"Solyc04g076210","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 16 (AHRD V3.3 *** A0A0B2PIM3_GLYSO)","protein_coding"
"Solyc07g005530","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** A0A061GR07_THECC)","protein_coding"
"Solyc07g056520","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A072V9D1_MEDTR)","protein_coding"
"Solyc07g061780","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 15-like protein (AHRD V3.3 *** A0A0B0MG64_GOSAR)","protein_coding"
"Solyc08g005080","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* G7KF27_MEDTR)","protein_coding"
"Solyc08g021790","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* G7KF27_MEDTR)","protein_coding"
"Solyc08g021830","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* G7KF27_MEDTR)","protein_coding"
"Solyc08g023360","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** A0A072UHZ2_MEDTR)","protein_coding"
"Solyc08g048310","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U7S3_MEDTR)","protein_coding"
"Solyc08g048410","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U7S3_MEDTR)","protein_coding"
"Solyc08g069050","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** D7LIB1_ARALL)","protein_coding"
"Solyc08g076910","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** G7KF27_MEDTR)","protein_coding"
"Solyc09g015580","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc09g015600","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U7S3_MEDTR)","protein_coding"
"Solyc09g015610","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U7S3_MEDTR)","protein_coding"
"Solyc09g017980","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072UHZ2_MEDTR)","protein_coding"
"Solyc09g017990","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* A0A072U6X5_MEDTR)","protein_coding"
"Solyc10g047480","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *-* G7KF27_MEDTR)","protein_coding"
"Solyc12g096430","No alias","Solanum lycopersicum","LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** D7MB42_ARALL)","protein_coding"
"Sopen00g005850","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen02g001010","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen04g029990","No alias","Solanum pennellii","MYND finger","protein_coding"
"Sopen07g001630","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen07g029880","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen07g030100","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen08g001100","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen08g015660","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen08g022700","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen08g025480","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen09g010320","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen10g017710","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen12g032270","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"