"sequence_id","alias","species","description","type" "Brara.A02378.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02258.1","No alias","Brassica rapa","Unknown function","protein_coding" "LOC_Os04g06870","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os10g39070","No alias","Oryza sativa","retrotransposon protein, putative, LINE subclass, expressed","protein_coding" "MA_10426903g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10427783g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_878966g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "Potri.004G128200","No alias","Populus trichocarpa","zinc ion binding;nucleic acid binding","protein_coding" "PSME_00000199-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00000515-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00001109-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00001111-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00001667-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00002175-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00002881-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00003057-RA","No alias","Pseudotsuga menziesii","(at3g09510 : 81.3) Ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 1469 Blast hits to 1446 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1468; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)","protein_coding" "PSME_00003160-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00004013-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00004768-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005063-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005261-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005404-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005455-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005539-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005929-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006016-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006087-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006552-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006611-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006850-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00007871-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00007981-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00008027-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00008167-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00008611-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00008841-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00009430-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00009966-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00010696-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00010881-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00011182-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00011615-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012027-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012135-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012242-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012695-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012765-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00013049-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00013778-RA","No alias","Pseudotsuga menziesii","(at4g29090 : 122.0) Ribonuclease H-like superfamily protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding; INVOLVED IN: RNA-dependent DNA replication; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G34320.1); Has 2218 Blast hits to 2138 proteins in 33 species: Archae - 2; Bacteria - 6; Metazoa - 6; Fungi - 0; Plants - 2203; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)","protein_coding" "PSME_00014612-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00014942-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00014951-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00015206-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00017208-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00017898-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00017978-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00018776-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00019329-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00020002-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00020785-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00021820-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00021943-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022097-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022156-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022369-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022554-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022903-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00023261-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00023567-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00024201-RA","No alias","Pseudotsuga menziesii","(at3g12860 : 88.2) NOP56-like pre RNA processing ribonucleoprotein; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: homolog of nucleolar protein NOP56 (TAIR:AT1G56110.1); Has 9295 Blast hits to 5418 proteins in 524 species: Archae - 248; Bacteria - 207; Metazoa - 3152; Fungi - 1154; Plants - 664; Viruses - 16; Other Eukaryotes - 3854 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "PSME_00024505-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00024980-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00025464-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00026163-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00026657-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00027284-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00028278-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00028336-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00029767-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00031604-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00031605-RA","No alias","Pseudotsuga menziesii","(at3g08720 : 90.9) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description)","protein_coding" "PSME_00031943-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00032345-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00032475-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00034499-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00035328-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00036326-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00036430-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00036464-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00037006-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00037719-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00039008-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00039009-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00040685-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00040715-RA","No alias","Pseudotsuga menziesii","(at4g21760 : 94.4) beta-glucosidase 47 (BGLU47); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-glucosidase 45 (TAIR:AT1G61810.1); Has 11354 Blast hits to 11023 proteins in 1477 species: Archae - 142; Bacteria - 7853; Metazoa - 716; Fungi - 199; Plants - 1433; Viruses - 0; Other Eukaryotes - 1011 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description)","protein_coding" "PSME_00040743-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00042119-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00043156-RA","No alias","Pseudotsuga menziesii","(at5g12870 : 144.0) Member of the R2R3 factor gene family.; myb domain protein 46 (MYB46); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 83 (TAIR:AT3G08500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20027|myb3_horvu : 137.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 288.0) & (original description: no original description)","protein_coding" "PSME_00043285-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00043957-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00045326-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00045946-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00045951-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00046393-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00048074-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00048319-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00048403-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00049339-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00049991-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00051363-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00053540-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00054799-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00055032-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00055940-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "Sopen00g009380","No alias","Solanum pennellii","Reverse transcriptase (RNA-dependent DNA polymerase)","protein_coding"