"sequence_id","alias","species","description","type"
"153173","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 3","protein_coding"
"438411","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 3","protein_coding"
"A4A49_21621","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 3","protein_coding"
"A4A49_65614","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 3","protein_coding"
"At2g22310","No alias","Arabidopsis thaliana","UBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W1M0]","protein_coding"
"At4g39910","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:O24454]","protein_coding"
"Bradi1g71830","No alias","Brachypodium distachyon","ubiquitin-specific protease 3","protein_coding"
"Bradi3g46610","No alias","Brachypodium distachyon","ubiquitin-specific protease 4","protein_coding"
"Bradi5g12000","No alias","Brachypodium distachyon","ubiquitin-specific protease 4","protein_coding"
"Brara.A00080.1","No alias","Brassica rapa","deubiquitinase *(UBP3-4)","protein_coding"
"Brara.H01767.1","No alias","Brassica rapa","deubiquitinase *(UBP3-4)","protein_coding"
"Brara.I04590.1","No alias","Brassica rapa","deubiquitinase *(UBP3-4)","protein_coding"
"Cre06.g250750","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 3","protein_coding"
"evm.model.contig_2094.8","No alias","Porphyridium purpureum","(at4g39910 : 213.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3646.2","No alias","Porphyridium purpureum","(at4g39910 : 324.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.78","No alias","Cyanophora paradoxa","(at2g22310 : 145.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.79","No alias","Cyanophora paradoxa","(at4g39910 : 131.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"Glyma.05G178100","No alias","Glycine max","ubiquitin-specific protease 3","protein_coding"
"Glyma.08G135100","No alias","Glycine max","ubiquitin-specific protease 3","protein_coding"
"Glyma.11G240500","No alias","Glycine max","ubiquitin-specific protease 3","protein_coding"
"Glyma.18G016800","No alias","Glycine max","ubiquitin-specific protease 3","protein_coding"
"GRMZM2G036186","No alias","Zea mays","ubiquitin-specific protease 4","protein_coding"
"GRMZM2G049568","No alias","Zea mays","ubiquitin-specific protease 4","protein_coding"
"GRMZM2G072146","No alias","Zea mays","ubiquitin-specific protease 3","protein_coding"
"GRMZM2G113821","No alias","Zea mays","ubiquitin-specific protease 3","protein_coding"
"HORVU2Hr1G079230.8","No alias","Hordeum vulgare","deubiquitinase *(UBP3-4)","protein_coding"
"HORVU4Hr1G078590.1","No alias","Hordeum vulgare","deubiquitinase *(UBP3-4)","protein_coding"
"HORVU6Hr1G050090.5","No alias","Hordeum vulgare","deubiquitinase *(UBP3-4)","protein_coding"
"Kfl00112_0200","kfl00112_0200_v1.1","Klebsormidium nitens","(at4g39910 : 511.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"LOC_Os02g36400","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os03g09080","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os04g37950","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"MA_10437015g0010","No alias","Picea abies","(at4g39910 : 410.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"MA_19171g0010","No alias","Picea abies","(at4g39910 : 162.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"Mp1g16430.1","No alias","Marchantia polymorpha","deubiquitinase (UBP3-4)","protein_coding"
"Potri.005G074900","No alias","Populus trichocarpa","ubiquitin-specific protease 3","protein_coding"
"Potri.007G093600","No alias","Populus trichocarpa","ubiquitin-specific protease 3","protein_coding"
"Pp1s5_405V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase 4","protein_coding"
"Pp1s74_121V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase 4","protein_coding"
"Pp1s74_129V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase 4","protein_coding"
"PSME_00004309-RA","No alias","Pseudotsuga menziesii","(at4g39910 : 466.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 932.0) &  (original description: no original description)","protein_coding"
"PSME_00046073-RA","No alias","Pseudotsuga menziesii","(at2g22310 : 276.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"PSME_00047408-RA","No alias","Pseudotsuga menziesii","(at4g39910 : 476.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 952.0) &  (original description: no original description)","protein_coding"
"Seita.1G204800.1","No alias","Setaria italica ","deubiquitinase *(UBP3-4)","protein_coding"
"Seita.7G119600.1","No alias","Setaria italica ","deubiquitinase *(UBP3-4)","protein_coding"
"Seita.9G510300.1","No alias","Setaria italica ","deubiquitinase *(UBP3-4)","protein_coding"
"Sobic.001G475300.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP3-4)","protein_coding"
"Sobic.004G188600.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP3-4)","protein_coding"
"Sobic.006G101700.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP3-4)","protein_coding"
"Solyc01g105240","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** B9SZ50_RICCO)","protein_coding"
"Solyc04g056290","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** A0A072TTI7_MEDTR)","protein_coding"
"Sopen01g047750","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"
"Sopen04g025180","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase","protein_coding"