"sequence_id","alias","species","description","type"
"110708","No alias","Selaginella moellendorffii ","thioredoxin F2","protein_coding"
"115886","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A7","protein_coding"
"117904","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"118803","No alias","Selaginella moellendorffii ","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding"
"121598","No alias","Selaginella moellendorffii ","tonoplast dicarboxylate transporter","protein_coding"
"137886","No alias","Selaginella moellendorffii ","maturase K","protein_coding"
"141946","No alias","Selaginella moellendorffii ","outer plastid envelope protein 16-1","protein_coding"
"144086","No alias","Selaginella moellendorffii ","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"145611","No alias","Selaginella moellendorffii ","glutamate:glyoxylate aminotransferase","protein_coding"
"148692","No alias","Selaginella moellendorffii ","Translation initiation factor 2, small GTP-binding protein","protein_coding"
"149244","No alias","Selaginella moellendorffii ","K+ uptake permease 11","protein_coding"
"149847","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"149856","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"153433","No alias","Selaginella moellendorffii ","Transketolase family protein","protein_coding"
"153563","No alias","Selaginella moellendorffii ","glycine decarboxylase P-protein 2","protein_coding"
"153581","No alias","Selaginella moellendorffii ","phospholipase D delta","protein_coding"
"154869","No alias","Selaginella moellendorffii ","cold shock domain protein 1","protein_coding"
"155351","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"159420","No alias","Selaginella moellendorffii ","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding"
"163526","No alias","Selaginella moellendorffii ","RNI-like superfamily protein","protein_coding"
"165987","No alias","Selaginella moellendorffii ","UDP-GLUCOSE PYROPHOSPHORYLASE 1","protein_coding"
"166350","No alias","Selaginella moellendorffii ","beta-ketoacyl reductase 1","protein_coding"
"171031","No alias","Selaginella moellendorffii ","Glutamyl-tRNA reductase family protein","protein_coding"
"172464","No alias","Selaginella moellendorffii ","Phosphate-responsive 1 family protein","protein_coding"
"172950","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"174630","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"178158","No alias","Selaginella moellendorffii ","lipoxygenase 3","protein_coding"
"184811","No alias","Selaginella moellendorffii ","trehalose-6-phosphate synthase","protein_coding"
"229902","No alias","Selaginella moellendorffii ","Glutaredoxin family protein","protein_coding"
"231708","No alias","Selaginella moellendorffii ","magnesium (Mg) transporter 10","protein_coding"
"231921","No alias","Selaginella moellendorffii ","Calcium-dependent phosphotriesterase superfamily protein","protein_coding"
"233607","No alias","Selaginella moellendorffii ","Inositol monophosphatase family protein","protein_coding"
"236581","No alias","Selaginella moellendorffii ","2Fe-2S ferredoxin-like superfamily protein","protein_coding"
"236787","No alias","Selaginella moellendorffii ","tubulin alpha-2 chain","protein_coding"
"24001","No alias","Selaginella moellendorffii ","xylem bark cysteine peptidase 3","protein_coding"
"267533","No alias","Selaginella moellendorffii ","Phosphoglycerate kinase family protein","protein_coding"
"268623","No alias","Selaginella moellendorffii ","rubisco activase","protein_coding"
"270375","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 11A3","protein_coding"
"270698","No alias","Selaginella moellendorffii ","Aldolase superfamily protein","protein_coding"
"270825","No alias","Selaginella moellendorffii ","glyceraldehyde 3-phosphate dehydrogenase A subunit 2","protein_coding"
"271030","No alias","Selaginella moellendorffii ","Pyridine nucleotide-disulphide oxidoreductase family protein","protein_coding"
"271586","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417176","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"422939","No alias","Selaginella moellendorffii ","hydroxyproline-rich glycoprotein family protein","protein_coding"
"437606","No alias","Selaginella moellendorffii ","AAA-type ATPase family protein / ankyrin repeat family protein","protein_coding"
"439341","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"440439","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"441002","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"444108","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"445683","No alias","Selaginella moellendorffii ","ferric reduction oxidase 6","protein_coding"
"448423","No alias","Selaginella moellendorffii ","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding"
"448753","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"448933","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"63565","No alias","Selaginella moellendorffii ","phosphoglycerate/bisphosphoglycerate mutase family protein","protein_coding"
"74684","No alias","Selaginella moellendorffii ","PLC-like phosphodiesterases superfamily protein","protein_coding"
"74687","No alias","Selaginella moellendorffii ","mitogen-activated protein kinase 16","protein_coding"
"78366","No alias","Selaginella moellendorffii ","ABC2 homolog 13","protein_coding"
"79971","No alias","Selaginella moellendorffii ","Endonuclease/exonuclease/phosphatase family protein","protein_coding"
"82367","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"82517","No alias","Selaginella moellendorffii ","Leucine-rich repeat protein kinase family protein","protein_coding"
"83798","No alias","Selaginella moellendorffii ","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding"
"84467","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"88460","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1118)","protein_coding"
"89924","No alias","Selaginella moellendorffii ","cycling DOF factor 1","protein_coding"
"91391","No alias","Selaginella moellendorffii ","Protein of unknown function, DUF617","protein_coding"
"91594","No alias","Selaginella moellendorffii ","Uncharacterised protein family (UPF0114)","protein_coding"
"94384","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"96134","No alias","Selaginella moellendorffii ","thioredoxin M-type 4","protein_coding"
"96287","No alias","Selaginella moellendorffii ","Rubredoxin-like superfamily protein","protein_coding"
"96997","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"A4A49_01880","No alias","Nicotiana attenuata","magnesium-chelatase subunit chlh, chloroplastic","protein_coding"
"AC202564.3_FG006","No alias","Zea mays","Function unknown","protein_coding"
"AC203240.3_FG009","No alias","Zea mays","Function unknown","protein_coding"
"AC214244.4_FG003","No alias","Zea mays","Function unknown","protein_coding"
"At1g02205","No alias","Arabidopsis thaliana","Fatty acid hydroxylase superfamily [Source:TAIR;Acc:AT1G02205]","protein_coding"
"At1g03130","No alias","Arabidopsis thaliana","Photosystem I reaction center subunit II-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SA56]","protein_coding"
"At1g06040","No alias","Arabidopsis thaliana","B-box zinc finger protein 24 [Source:UniProtKB/Swiss-Prot;Acc:Q96288]","protein_coding"
"At1g07370","No alias","Arabidopsis thaliana","Proliferating cellular nuclear antigen 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q7]","protein_coding"
"At1g08580","No alias","Arabidopsis thaliana","At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]","protein_coding"
"At1g10490","No alias","Arabidopsis thaliana","RNA cytidine acetyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIK4]","protein_coding"
"At1g11190","No alias","Arabidopsis thaliana","ENDO1 [Source:UniProtKB/TrEMBL;Acc:A0A178WKD4]","protein_coding"
"At1g13650","No alias","Arabidopsis thaliana","At1g13650 [Source:UniProtKB/TrEMBL;Acc:A2RVL9]","protein_coding"
"At1g15250","No alias","Arabidopsis thaliana","60S ribosomal protein L37-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFH7]","protein_coding"
"At1g15820","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q9LMQ2]","protein_coding"
"At1g18060","No alias","Arabidopsis thaliana","AT1g18060/T10F20.23 [Source:UniProtKB/TrEMBL;Acc:Q9LM40]","protein_coding"
"At1g18150","No alias","Arabidopsis thaliana","Mitogen-activated protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM33]","protein_coding"
"At1g18360","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]","protein_coding"
"At1g18850","No alias","Arabidopsis thaliana","F6A14.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9V4]","protein_coding"
"At1g20950","No alias","Arabidopsis thaliana","Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178WMV9]","protein_coding"
"At1g21500","No alias","Arabidopsis thaliana","F24J8.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPK9]","protein_coding"
"At1g23410","No alias","Arabidopsis thaliana","Ubiquitin-40S ribosomal protein S27a-1 [Source:UniProtKB/Swiss-Prot;Acc:P59271]","protein_coding"
"At1g29910","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ87]","protein_coding"
"At1g29940","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178W5B4]","protein_coding"
"At1g32450","No alias","Arabidopsis thaliana","Protein NRT1/ PTR FAMILY 7.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQL2]","protein_coding"
"At1g42540","No alias","Arabidopsis thaliana","Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]","protein_coding"
"At1g44446","No alias","Arabidopsis thaliana","CH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]","protein_coding"
"At1g48100","No alias","Arabidopsis thaliana","Polygalacturonase At1g48100 [Source:UniProtKB/Swiss-Prot;Acc:Q949Z1]","protein_coding"
"At1g48830","No alias","Arabidopsis thaliana","40S ribosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF0]","protein_coding"
"At1g48920","No alias","Arabidopsis thaliana","Nucleolin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ1]","protein_coding"
"At1g49540","No alias","Arabidopsis thaliana","Elongator protein 2 [Source:UniProtKB/TrEMBL;Acc:F4I1S8]","protein_coding"
"At1g52230","No alias","Arabidopsis thaliana","Photosystem I reaction center subunit VI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SUI6]","protein_coding"
"At1g53670","No alias","Arabidopsis thaliana","Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]","protein_coding"
"At1g58290","No alias","Arabidopsis thaliana","Glutamyl-tRNA reductase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42804]","protein_coding"
"At1g60800","No alias","Arabidopsis thaliana","Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]","protein_coding"
"At1g62150","No alias","Arabidopsis thaliana","Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWB0]","protein_coding"
"At1g62560","No alias","Arabidopsis thaliana","Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]","protein_coding"
"At1g63050","No alias","Arabidopsis thaliana","LPLAT2 [Source:UniProtKB/TrEMBL;Acc:A0A178WEX3]","protein_coding"
"At1g64900","No alias","Arabidopsis thaliana","Cytochrome P450 89A2 [Source:UniProtKB/Swiss-Prot;Acc:Q42602]","protein_coding"
"At1g70210","No alias","Arabidopsis thaliana","Cyclin-D1-1 [Source:UniProtKB/Swiss-Prot;Acc:P42751]","protein_coding"
"At1g70610","No alias","Arabidopsis thaliana","ABC transporter B family member 26, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RY46]","protein_coding"
"At1g77470","No alias","Arabidopsis thaliana","Replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAQ8]","protein_coding"
"At2g01890","No alias","Arabidopsis thaliana","Purple acid phosphatase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ2]","protein_coding"
"At2g03090","No alias","Arabidopsis thaliana","EXPA15 [Source:UniProtKB/TrEMBL;Acc:A0A178VZP8]","protein_coding"
"At2g05070","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein 2.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J7]","protein_coding"
"At2g07050","No alias","Arabidopsis thaliana","Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]","protein_coding"
"At2g18900","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IRI1]","protein_coding"
"At2g20610","No alias","Arabidopsis thaliana","S-alkyl-thiohydroximate lyase SUR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIV0]","protein_coding"
"At2g21320","No alias","Arabidopsis thaliana","B-box zinc finger protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU5]","protein_coding"
"At2g21860","No alias","Arabidopsis thaliana","At2g21860/F7D8.18 [Source:UniProtKB/TrEMBL;Acc:Q9SJ13]","protein_coding"
"At2g22240","No alias","Arabidopsis thaliana","Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]","protein_coding"
"At2g23150","No alias","Arabidopsis thaliana","Metal transporter Nramp3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNV9]","protein_coding"
"At2g25080","No alias","Arabidopsis thaliana","Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]","protein_coding"
"At2g25900","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O82307]","protein_coding"
"At2g29650","No alias","Arabidopsis thaliana","Sodium-dependent phosphate transport protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82390]","protein_coding"
"At2g31230","No alias","Arabidopsis thaliana","Ethylene-responsive transcription factor 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYM0]","protein_coding"
"At2g31530","No alias","Arabidopsis thaliana","Preprotein translocase subunit SCY2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IQV7]","protein_coding"
"At2g32150","No alias","Arabidopsis thaliana","At2g32150/F22D22.10 [Source:UniProtKB/TrEMBL;Acc:Q9SKY5]","protein_coding"
"At2g33590","No alias","Arabidopsis thaliana","CRL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE7]","protein_coding"
"At2g34050","No alias","Arabidopsis thaliana","ATP synthase F1 complex assembly factor [Source:UniProtKB/TrEMBL;Acc:O22958]","protein_coding"
"At2g34260","No alias","Arabidopsis thaliana","WD repeat-containing protein 55 [Source:UniProtKB/Swiss-Prot;Acc:O80775]","protein_coding"
"At2g34430","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q39142]","protein_coding"
"At2g35060","No alias","Arabidopsis thaliana","Potassium transporter [Source:UniProtKB/TrEMBL;Acc:F4IIZ3]","protein_coding"
"At2g36620","No alias","Arabidopsis thaliana","60S ribosomal protein L24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42347]","protein_coding"
"At2g37860","No alias","Arabidopsis thaliana","Protein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]","protein_coding"
"At2g40400","No alias","Arabidopsis thaliana","Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]","protein_coding"
"At2g40435","No alias","Arabidopsis thaliana","Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]","protein_coding"
"At2g40550","No alias","Arabidopsis thaliana","Mini-chromosome maintenance complex-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q501D5]","protein_coding"
"At2g40710","No alias","Arabidopsis thaliana","Hemolysin-III related integral membrane protein [Source:UniProtKB/TrEMBL;Acc:F4II26]","protein_coding"
"At2g41190","No alias","Arabidopsis thaliana","Amino acid transporter AVT1A [Source:UniProtKB/Swiss-Prot;Acc:O80668]","protein_coding"
"At2g42220","No alias","Arabidopsis thaliana","Rhodanese-like domain-containing protein 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48529]","protein_coding"
"At2g43630","No alias","Arabidopsis thaliana","Nucleusenvelope protein [Source:UniProtKB/TrEMBL;Acc:Q8VYY8]","protein_coding"
"At3g01060","No alias","Arabidopsis thaliana","Lysine-tRNA ligase [Source:UniProtKB/TrEMBL;Acc:Q8RWI4]","protein_coding"
"At3g02530","No alias","Arabidopsis thaliana","T-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]","protein_coding"
"At3g03060","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]","protein_coding"
"At3g05030","No alias","Arabidopsis thaliana","Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]","protein_coding"
"At3g06470","No alias","Arabidopsis thaliana","F24P17.3 protein [Source:UniProtKB/TrEMBL;Acc:Q9SQV0]","protein_coding"
"At3g06530","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP28]","protein_coding"
"At3g06980","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUG7]","protein_coding"
"At3g07360","No alias","Arabidopsis thaliana","RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJC7]","protein_coding"
"At3g07770","No alias","Arabidopsis thaliana","Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]","protein_coding"
"At3g08640","No alias","Arabidopsis thaliana","Protein RETICULATA-RELATED 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z2]","protein_coding"
"At3g08940","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein CP29.2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XF88]","protein_coding"
"At3g09630","No alias","Arabidopsis thaliana","60S ribosomal protein L4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF40]","protein_coding"
"At3g11900","No alias","Arabidopsis thaliana","Amino acid transporter ANT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF09]","protein_coding"
"At3g12270","No alias","Arabidopsis thaliana","Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]","protein_coding"
"At3g13230","No alias","Arabidopsis thaliana","At3g13230 [Source:UniProtKB/TrEMBL;Acc:Q9LTU6]","protein_coding"
"At3g14200","No alias","Arabidopsis thaliana","Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJG5]","protein_coding"
"At3g15680","No alias","Arabidopsis thaliana","At3g15680 [Source:UniProtKB/TrEMBL;Acc:Q9LW11]","protein_coding"
"At3g16080","No alias","Arabidopsis thaliana","60S ribosomal protein L37-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LEM8]","protein_coding"
"At3g16780","No alias","Arabidopsis thaliana","60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]","protein_coding"
"At3g23580","No alias","Arabidopsis thaliana","Ribonucleoside-diphosphate reductase small chain A [Source:UniProtKB/Swiss-Prot;Acc:P50651]","protein_coding"
"At3g24840","No alias","Arabidopsis thaliana","Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]","protein_coding"
"At3g26410","No alias","Arabidopsis thaliana","tRNA modification 11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LIN4]","protein_coding"
"At3g26520","No alias","Arabidopsis thaliana","Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]","protein_coding"
"At3g27690","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMB4]","protein_coding"
"At3g42660","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4JF14]","protein_coding"
"At3g44750","No alias","Arabidopsis thaliana","Histone deacetylase HDT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVE6]","protein_coding"
"At3g46210","No alias","Arabidopsis thaliana","Exosome complex exonuclease RRP46 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LX74]","protein_coding"
"At3g46560","No alias","Arabidopsis thaliana","Mitochondrial import inner membrane translocase subunit TIM9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGX9]","protein_coding"
"At3g47470","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VEE6]","protein_coding"
"At3g53700","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFF1]","protein_coding"
"At3g54660","No alias","Arabidopsis thaliana","At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]","protein_coding"
"At3g54900","No alias","Arabidopsis thaliana","Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]","protein_coding"
"At3g55280","No alias","Arabidopsis thaliana","60S ribosomal protein L23a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3C3]","protein_coding"
"At3g55610","No alias","Arabidopsis thaliana","Delta-1-pyrroline-5-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VF78]","protein_coding"
"At3g56940","No alias","Arabidopsis thaliana","Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]","protein_coding"
"At3g57940","No alias","Arabidopsis thaliana","RNA cytidine acetyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Q4]","protein_coding"
"At3g59060","No alias","Arabidopsis thaliana","Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]","protein_coding"
"At3g62700","No alias","Arabidopsis thaliana","ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]","protein_coding"
"At4g01050","No alias","Arabidopsis thaliana","thylakoid rhodanese-like [Source:TAIR;Acc:AT4G01050]","protein_coding"
"At4g02060","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM7 [Source:UniProtKB/Swiss-Prot;Acc:P43299]","protein_coding"
"At4g02850","No alias","Arabidopsis thaliana","At4g02850 [Source:UniProtKB/TrEMBL;Acc:Q66GM9]","protein_coding"
"At4g05410","No alias","Arabidopsis thaliana","U3 snoRNP-associated protein-like YAO [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V4]","protein_coding"
"At4g10480","No alias","Arabidopsis thaliana","Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]","protein_coding"
"At4g11330","No alias","Arabidopsis thaliana","Mitogen-activated protein kinase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q39025]","protein_coding"
"At4g13010","No alias","Arabidopsis thaliana","Chloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]","protein_coding"
"At4g17550","No alias","Arabidopsis thaliana","Putative glycerol-3-phosphate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:O23596]","protein_coding"
"At4g23290","No alias","Arabidopsis thaliana","Cysteine-rich receptor-like protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9X6]","protein_coding"
"At4g24780","No alias","Arabidopsis thaliana","Probable pectate lyase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M8]","protein_coding"
"At4g26970","No alias","Arabidopsis thaliana","Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UVE5]","protein_coding"
"At4g33110","No alias","Arabidopsis thaliana","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L788]","protein_coding"
"At4g33550","No alias","Arabidopsis thaliana","At4g33550 [Source:UniProtKB/TrEMBL;Acc:Q6NLG8]","protein_coding"
"At4g34730","No alias","Arabidopsis thaliana","Probable ribosome-binding factor A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O65693]","protein_coding"
"At4g34910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW44]","protein_coding"
"At4g36040","No alias","Arabidopsis thaliana","At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]","protein_coding"
"At4g38100","No alias","Arabidopsis thaliana","Protein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]","protein_coding"
"At4g38850","No alias","Arabidopsis thaliana","Auxin-responsive protein SAUR15 [Source:UniProtKB/Swiss-Prot;Acc:Q41220]","protein_coding"
"At5g01880","No alias","Arabidopsis thaliana","RING-H2 finger protein ATL74 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV8]","protein_coding"
"At5g02050","No alias","Arabidopsis thaliana","At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6]","protein_coding"
"At5g02430","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ59]","protein_coding"
"At5g03230","No alias","Arabidopsis thaliana","Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 [Source:UniProtKB/TrEMBL;Acc:Q9LYW2]","protein_coding"
"At5g03340","No alias","Arabidopsis thaliana","Cell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]","protein_coding"
"At5g04980","No alias","Arabidopsis thaliana","Type I inositol polyphosphate 5-phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:A8MR21]","protein_coding"
"At5g06970","No alias","Arabidopsis thaliana","Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]","protein_coding"
"At5g07270","No alias","Arabidopsis thaliana","XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]","protein_coding"
"At5g08330","No alias","Arabidopsis thaliana","Transcription factor TCP21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA2]","protein_coding"
"At5g10690","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g10690 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYD6]","protein_coding"
"At5g12470","No alias","Arabidopsis thaliana","Protein RETICULATA-RELATED 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94CJ5]","protein_coding"
"At5g13630","No alias","Arabidopsis thaliana","Magnesium-chelatase subunit ChlH, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB0]","protein_coding"
"At5g15160","No alias","Arabidopsis thaliana","Transcription factor PRE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG5]","protein_coding"
"At5g15910","No alias","Arabidopsis thaliana","NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q949S7]","protein_coding"
"At5g15980","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]","protein_coding"
"At5g16140","No alias","Arabidopsis thaliana","Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF14]","protein_coding"
"At5g19940","No alias","Arabidopsis thaliana","Probable plastid-lipid-associated protein 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q941D3]","protein_coding"
"At5g20380","No alias","Arabidopsis thaliana","phosphate transporter 4;5 [Source:TAIR;Acc:AT5G20380]","protein_coding"
"At5g24330","No alias","Arabidopsis thaliana","Histone-lysine N-methyltransferase ATXR6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNE9]","protein_coding"
"At5g35460","No alias","Arabidopsis thaliana","AT5g35460/MOK9_4 [Source:UniProtKB/TrEMBL;Acc:Q9FJB4]","protein_coding"
"At5g35970","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K1G7]","protein_coding"
"At5g37360","No alias","Arabidopsis thaliana","AT5g37360/MNJ8_150 [Source:UniProtKB/TrEMBL;Acc:Q93Z11]","protein_coding"
"At5g40390","No alias","Arabidopsis thaliana","Probable galactinol--sucrose galactosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FND9]","protein_coding"
"At5g41880","No alias","Arabidopsis thaliana","DNA primase [Source:UniProtKB/TrEMBL;Acc:F4JZZ1]","protein_coding"
"At5g43150","No alias","Arabidopsis thaliana","At5g43150 [Source:UniProtKB/TrEMBL;Acc:Q9FMG8]","protein_coding"
"At5g45410","No alias","Arabidopsis thaliana","AT5G45410 protein [Source:UniProtKB/TrEMBL;Acc:Q9FHJ5]","protein_coding"
"At5g45950","No alias","Arabidopsis thaliana","GDSL esterase/lipase At5g45950 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ41]","protein_coding"
"At5g51720","No alias","Arabidopsis thaliana","NEET [Source:UniProtKB/TrEMBL;Acc:A0A178UGQ5]","protein_coding"
"At5g54270","No alias","Arabidopsis thaliana","Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7M0]","protein_coding"
"At5g57040","No alias","Arabidopsis thaliana","At5g57040 [Source:UniProtKB/TrEMBL;Acc:Q9LTR8]","protein_coding"
"At5g57345","No alias","Arabidopsis thaliana","At5g57345 [Source:UniProtKB/TrEMBL;Acc:Q8LAD4]","protein_coding"
"At5g57660","No alias","Arabidopsis thaliana","Zinc finger protein CONSTANS-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH8]","protein_coding"
"At5g59400","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G1196 /.../Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT5G59400]","protein_coding"
"At5g63380","No alias","Arabidopsis thaliana","4-coumarate--CoA ligase-like 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84P23]","protein_coding"
"At5g64040","No alias","Arabidopsis thaliana","Photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) [Source:UniProtKB/TrEMBL;Acc:F4KC80]","protein_coding"
"At5g64080","No alias","Arabidopsis thaliana","Non-specific lipid-transfer protein-like protein At5g64080 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI9]","protein_coding"
"At5g64140","No alias","Arabidopsis thaliana","RPS28 [Source:UniProtKB/TrEMBL;Acc:A0A178UA91]","protein_coding"
"At5g65860","No alias","Arabidopsis thaliana","Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q2V2U9]","protein_coding"
"At5g66540","No alias","Arabidopsis thaliana","U3 small nucleolar ribonucleoprotein protein MPP10 [Source:UniProtKB/TrEMBL;Acc:Q9FJY5]","protein_coding"
"At5g67030","No alias","Arabidopsis thaliana","Zeaxanthin epoxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FGC7]","protein_coding"
"Bradi1g09840","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi1g15290","No alias","Brachypodium distachyon","photosystem II light harvesting complex gene 2.3","protein_coding"
"Bradi1g19220","No alias","Brachypodium distachyon","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Bradi1g23610","No alias","Brachypodium distachyon","photosystem I light harvesting complex gene 2","protein_coding"
"Bradi1g24760","No alias","Brachypodium distachyon","light-harvesting chlorophyll B-binding protein 3","protein_coding"
"Bradi1g38090","No alias","Brachypodium distachyon","Protein of unknown function (DUF1677)","protein_coding"
"Bradi1g44043","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g60600","No alias","Brachypodium distachyon","serine carboxypeptidase-like 51","protein_coding"
"Bradi1g60970","No alias","Brachypodium distachyon","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Bradi1g62400","No alias","Brachypodium distachyon","beta-amylase 3","protein_coding"
"Bradi1g65501","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g69070","No alias","Brachypodium distachyon","Erythronate-4-phosphate dehydrogenase family protein","protein_coding"
"Bradi1g76330","No alias","Brachypodium distachyon","catalase 2","protein_coding"
"Bradi2g05070","No alias","Brachypodium distachyon","Serinc-domain containing serine and sphingolipid biosynthesis protein","protein_coding"
"Bradi2g05927","No alias","Brachypodium distachyon","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Bradi2g11940","No alias","Brachypodium distachyon","senescence-associated gene 21","protein_coding"
"Bradi2g12047","No alias","Brachypodium distachyon","Pectinacetylesterase family protein","protein_coding"
"Bradi2g32900","No alias","Brachypodium distachyon","light-regulated zinc finger protein 1","protein_coding"
"Bradi2g38750","No alias","Brachypodium distachyon","outer plastid envelope protein 16-1","protein_coding"
"Bradi2g47540","No alias","Brachypodium distachyon","Nodulin MtN3 family protein","protein_coding"
"Bradi2g54177","No alias","Brachypodium distachyon","ROP interactive partner 3","protein_coding"
"Bradi3g07190","No alias","Brachypodium distachyon","photosystem I light harvesting complex gene 3","protein_coding"
"Bradi3g24760","No alias","Brachypodium distachyon","phytochrome kinase substrate-related","protein_coding"
"Bradi3g33170","No alias","Brachypodium distachyon","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Bradi3g36760","No alias","Brachypodium distachyon","light-harvesting chlorophyll-protein complex I subunit A4","protein_coding"
"Bradi3g37940","No alias","Brachypodium distachyon","nitrate reductase 1","protein_coding"
"Bradi3g40370","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi3g44370","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding"
"Bradi3g46480","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding"
"Bradi3g48180","No alias","Brachypodium distachyon","salt tolerance homologue","protein_coding"
"Bradi3g49360","No alias","Brachypodium distachyon","plasma membrane intrinsic protein 2","protein_coding"
"Bradi3g52358","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g52505","No alias","Brachypodium distachyon","alternative oxidase 1A","protein_coding"
"Bradi3g52660","No alias","Brachypodium distachyon","cytochrome P450, family 707, subfamily A, polypeptide 1","protein_coding"
"Bradi3g52680","No alias","Brachypodium distachyon","nine-cis-epoxycarotenoid dioxygenase 4","protein_coding"
"Bradi3g53370","No alias","Brachypodium distachyon","fatty acid desaturase 2","protein_coding"
"Bradi3g55890","No alias","Brachypodium distachyon","O-methyltransferase family protein","protein_coding"
"Bradi4g11420","No alias","Brachypodium distachyon","Uncharacterised protein family (UPF0497)","protein_coding"
"Bradi4g21170","No alias","Brachypodium distachyon","light harvesting complex of photosystem II 5","protein_coding"
"Bradi4g21830","No alias","Brachypodium distachyon","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Bradi4g25900","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding"
"Bradi4g28340","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g31140","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g37210","No alias","Brachypodium distachyon","photosystem II light harvesting complex gene B1B2","protein_coding"
"Bradi4g42240","No alias","Brachypodium distachyon","Protein of unknown function (DUF3049)","protein_coding"
"Bradi5g00750","No alias","Brachypodium distachyon","HXXXD-type acyl-transferase family protein","protein_coding"
"Bradi5g04130","No alias","Brachypodium distachyon","cinnamyl alcohol dehydrogenase 9","protein_coding"
"Bradi5g14490","No alias","Brachypodium distachyon","Cytochrome b561/ferric reductase transmembrane with DOMON related domain","protein_coding"
"Bradi5g15750","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g15970","No alias","Brachypodium distachyon","plasma membrane intrinsic protein 2","protein_coding"
"Bradi5g17200","No alias","Brachypodium distachyon","Protein of unknown function, DUF584","protein_coding"
"Bradi5g19130","No alias","Brachypodium distachyon","beta-hydroxylase 1","protein_coding"
"Bradi5g21531","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g27602","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Brara.A00007.1","No alias","Brassica rapa","regulatory subunit *(IDS12) of geranyl diphosphate synthase complex & isoprenyl diphosphate synthase *(IDS) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.A00632.1","No alias","Brassica rapa","regulatory protein *(PGR6) of plastoquinone homeostasis & ABC1 atypical protein kinase","protein_coding"
"Brara.A00666.1","No alias","Brassica rapa","M17-class leucyl aminopeptidase *(LAP) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.A01413.1","No alias","Brassica rapa","MAPKKK-kinase protein kinase & MAP4K accessory protein kinase *(TOI4/5) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A01466.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01955.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02067.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.A02372.1","No alias","Brassica rapa","glutamyl-tRNA reductase *(HEMA) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.A02717.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00152.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00467.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & callose synthase","protein_coding"
"Brara.B00730.1","No alias","Brassica rapa","NADH","protein_coding"
"Brara.B00839.1","No alias","Brassica rapa","pectin methylesterase","protein_coding"
"Brara.B01572.1","No alias","Brassica rapa","succinate dehydrogenase flavinylation factor *(SDHAF2)","protein_coding"
"Brara.B01919.1","No alias","Brassica rapa","tryptophan aminotransferase","protein_coding"
"Brara.B02126.1","No alias","Brassica rapa","geranylgeranyl reductase *(CHLP)","protein_coding"
"Brara.B02567.1","No alias","Brassica rapa","basal Sigma-type transcription factor","protein_coding"
"Brara.B03201.1","No alias","Brassica rapa","component *(TMO5) of TMO5-LHW cytokinin control complex & bHLH-type transcription factor","protein_coding"
"Brara.B03467.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03549.1","No alias","Brassica rapa","acyl-CoA-binding protein *(ACBP4/5)","protein_coding"
"Brara.C00575.1","No alias","Brassica rapa","abscisic acid perception modulator *(ABAR) & component *(CHLH) of magnesium-chelatase complex","protein_coding"
"Brara.C01025.1","No alias","Brassica rapa","component *(VPS24) of ESCRT-III complex","protein_coding"
"Brara.C01424.1","No alias","Brassica rapa","circadian clock factor *(REVEILLE) & transcription factor *(REVEILLE)","protein_coding"
"Brara.C01519.1","No alias","Brassica rapa","SBP-type transcription factor","protein_coding"
"Brara.C01620.1","No alias","Brassica rapa","assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly","protein_coding"
"Brara.C02476.1","No alias","Brassica rapa","monooxygenase *(MAX1) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.C02638.1","No alias","Brassica rapa","component *(LHCb5) of LHC-II complex","protein_coding"
"Brara.C02663.1","No alias","Brassica rapa","GDP-D-mannose pyrophosphorylase *(VTC1) & EC_2.7 transferase transferring phosphorus-containing group & GDP-D-mannose pyrophosphorylase *(VTC1)","protein_coding"
"Brara.C02782.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03128.1","No alias","Brassica rapa","pectin acetylesterase *(PAE)","protein_coding"
"Brara.C03345.1","No alias","Brassica rapa","endo-beta-1,4-mannanase","protein_coding"
"Brara.C03433.1","No alias","Brassica rapa","phosphoglycerate kinase & phosphoglycerate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C04139.1","No alias","Brassica rapa","substrate adaptor of SCF E3 ubiquitin ligase *(PCH)","protein_coding"
"Brara.C04232.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04358.1","No alias","Brassica rapa","flavanone 3-hydroxylase *(F3H) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.C04411.1","No alias","Brassica rapa","subunit d of ATP synthase membrane MF0 subcomplex","protein_coding"
"Brara.C04650.1","No alias","Brassica rapa","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D00027.1","No alias","Brassica rapa","Ran-activating protein of nucleocytoplasmic transport","protein_coding"
"Brara.D00073.1","No alias","Brassica rapa","pectin acetylesterase *(PAE)","protein_coding"
"Brara.D00160.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00201.1","No alias","Brassica rapa","O-acetylserine sulfydrylase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.D00512.1","No alias","Brassica rapa","actin filament protein","protein_coding"
"Brara.D00599.1","No alias","Brassica rapa","subunit d of ATP synthase membrane MF0 subcomplex","protein_coding"
"Brara.D01033.1","No alias","Brassica rapa","U-Box-group-II E3 ubiquitin ligase","protein_coding"
"Brara.D01239.1","No alias","Brassica rapa","receptor component *(Tom20) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Brara.D01289.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01297.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01931.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding"
"Brara.D02093.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00086.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding"
"Brara.E00142.1","No alias","Brassica rapa","regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & component *(SPA) of substrate adaptor module of CUL4-based ubiquitin ligase complex","protein_coding"
"Brara.E00895.1","No alias","Brassica rapa","Fibrillin plastoglobule core protein *(FBN1/2)","protein_coding"
"Brara.E00905.1","No alias","Brassica rapa","lipoamide-containing component *(H-protein) of glycine cleavage system","protein_coding"
"Brara.E00913.1","No alias","Brassica rapa","regulatory protein *(BCM) of chlorophyll homeostasis","protein_coding"
"Brara.E01462.1","No alias","Brassica rapa","protein involved in PS-II assembly *(MET1)","protein_coding"
"Brara.E01743.1","No alias","Brassica rapa","glycerate","protein_coding"
"Brara.E02474.1","No alias","Brassica rapa","plastidial transcript stability factor *(HCF107)","protein_coding"
"Brara.E02550.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02638.1","No alias","Brassica rapa","component *(IDM1) of ROS1-recruitment complex","protein_coding"
"Brara.E03096.1","No alias","Brassica rapa","LHC-related protein *(OHP1)","protein_coding"
"Brara.E03203.1","No alias","Brassica rapa","component *(C1-Fd) of NADH dehydrogenase complex","protein_coding"
"Brara.E03313.1","No alias","Brassica rapa","type-2 peroxiredoxin *(PrxII)","protein_coding"
"Brara.E03368.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03422.1","No alias","Brassica rapa","ribose 5-phosphate isomerase & ribose 5-phosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.E03564.1","No alias","Brassica rapa","F-type thioredoxin *(Trx-F)","protein_coding"
"Brara.F00205.1","No alias","Brassica rapa","component *(PsaH) of PS-I complex","protein_coding"
"Brara.F00211.1","No alias","Brassica rapa","HD-ZIP III-type transcription factor","protein_coding"
"Brara.F00234.1","No alias","Brassica rapa","SD-2 protein kinase & Thaumatin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F00879.1","No alias","Brassica rapa","fumarylacetoacetate hydrolase *(FAH)","protein_coding"
"Brara.F01151.1","No alias","Brassica rapa","ER body formation factor *(NAIP)","protein_coding"
"Brara.F01586.1","No alias","Brassica rapa","substrate adaptor *(FBP7) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.F01660.1","No alias","Brassica rapa","phospholipase-C *(nPLC))","protein_coding"
"Brara.F01982.1","No alias","Brassica rapa","fatty acid transporter *(FAX)","protein_coding"
"Brara.F01991.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02271.1","No alias","Brassica rapa","histidinol dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.F02608.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02981.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03062.1","No alias","Brassica rapa","solute transporter *(AAAP)","protein_coding"
"Brara.F03773.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00213.1","No alias","Brassica rapa","NAC-type transcription factor","protein_coding"
"Brara.G00452.1","No alias","Brassica rapa","methylthioribose-1-phosphate isomerase *(MTI) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.G01804.1","No alias","Brassica rapa","deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Brara.G01815.1","No alias","Brassica rapa","subunit D of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Brara.G01845.1","No alias","Brassica rapa","accessory component *(GUN4) of magnesium-chelatase complex","protein_coding"
"Brara.G02065.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02178.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02436.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding"
"Brara.G02697.1","No alias","Brassica rapa","lactoyl-glutathione lyase *(GLX1) & EC_4.4 carbon-sulfur lyase","protein_coding"
"Brara.G03027.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03109.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03173.1","No alias","Brassica rapa","geranylgeranyl reductase *(CHLP)","protein_coding"
"Brara.G03487.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03491.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03632.1","No alias","Brassica rapa","component *(PsbR) of PS-II complex","protein_coding"
"Brara.H00177.1","No alias","Brassica rapa","component *(PsaH) of PS-I complex","protein_coding"
"Brara.H00664.1","No alias","Brassica rapa","adenylate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H00805.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding"
"Brara.H00830.1","No alias","Brassica rapa","sugar efflux transporter *(SWEET)","protein_coding"
"Brara.H01891.1","No alias","Brassica rapa","component *(PsaK) of PS-I complex","protein_coding"
"Brara.H01935.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00563.1","No alias","Brassica rapa","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding"
"Brara.I00582.1","No alias","Brassica rapa","basal Sigma-type transcription factor","protein_coding"
"Brara.I00732.1","No alias","Brassica rapa","pectate lyase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.I00904.1","No alias","Brassica rapa","endo-beta-1,4-mannanase","protein_coding"
"Brara.I00922.1","No alias","Brassica rapa","3-dehydroquinate synthase *(DHQS)","protein_coding"
"Brara.I01016.1","No alias","Brassica rapa","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I01322.1","No alias","Brassica rapa","UDP-D-glucose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"Brara.I02107.1","No alias","Brassica rapa","EC_2.8 transferase transferring sulfur-containing group","protein_coding"
"Brara.I02200.1","No alias","Brassica rapa","proton","protein_coding"
"Brara.I02368.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02734.1","No alias","Brassica rapa","bifunctional homoserine dehydrogenase and aspartate kinase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.I02999.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03456.1","No alias","Brassica rapa","flavanone 3-hydroxylase *(F3H) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.I03580.1","No alias","Brassica rapa","component *(FtsZ2) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Brara.I03677.1","No alias","Brassica rapa","fructose-1,6-bisphosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.I03723.1","No alias","Brassica rapa","glutathione reductase *(GR) & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Brara.I03920.1","No alias","Brassica rapa","catalytic component *(CRD1) of Mg-protoporphyrin IX monomethylester cyclase complex","protein_coding"
"Brara.I03999.1","No alias","Brassica rapa","E2 SUMO ubiquitin-conjugating enzyme *(SCE1)","protein_coding"
"Brara.I04371.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04717.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04764.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding"
"Brara.I04897.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05156.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & aminomethyltransferase component *(T-protein) of glycine cleavage system","protein_coding"
"Brara.J00276.1","No alias","Brassica rapa","component *(NDUFA13/B16.6) of NADH dehydrogenase alpha subcomplex","protein_coding"
"Brara.J00282.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00660.1","No alias","Brassica rapa","quinolinate synthase & cysteine desulfurase activator component of plastidial SUF system assembly phase","protein_coding"
"Brara.J01003.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01282.1","No alias","Brassica rapa","mitochondrial uncoupling protein *(PUMP) & solute transporter *(MTCC)","protein_coding"
"Brara.J01287.1","No alias","Brassica rapa","hexose transporter *(VGT)","protein_coding"
"Brara.J01299.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01316.1","No alias","Brassica rapa","regulatory protein *(PGRL2) of cyclic electron flow","protein_coding"
"Brara.J02279.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding"
"Brara.J02280.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding"
"Brara.J02281.1","No alias","Brassica rapa","A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.J02304.1","No alias","Brassica rapa","mechanosensitive ion channel *(MSL)","protein_coding"
"Brara.J02379.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.K00015.1","No alias","Brassica rapa","UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.K00046.1","No alias","Brassica rapa","component *(COX6b) of cytochrome c oxidase complex","protein_coding"
"Brara.K00208.1","No alias","Brassica rapa","glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.K01240.1","No alias","Brassica rapa","HD-ZIP I/II-type transcription factor","protein_coding"
"Brara.K01252.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01808.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Cre01.g003550","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre01.g010900","No alias","Chlamydomonas reinhardtii","glyceraldehyde-3-phosphate dehydrogenase B subunit","protein_coding"
"Cre01.g015350","No alias","Chlamydomonas reinhardtii","protochlorophyllide oxidoreductase A","protein_coding"
"Cre01.g015600","No alias","Chlamydomonas reinhardtii","ILITYHIA","protein_coding"
"Cre01.g021050","No alias","Chlamydomonas reinhardtii","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein","protein_coding"
"Cre01.g022700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g029950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g030250","No alias","Chlamydomonas reinhardtii","Inositol monophosphatase family protein","protein_coding"
"Cre01.g040450","No alias","Chlamydomonas reinhardtii","histidine-containing phosphotransfer factor 5","protein_coding"
"Cre01.g042800","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre01.g052250","No alias","Chlamydomonas reinhardtii","thioredoxin X","protein_coding"
"Cre01.g064727","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding"
"Cre02.g081250","No alias","Chlamydomonas reinhardtii","plastid transcriptionally active 16","protein_coding"
"Cre02.g083550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095070","No alias","Chlamydomonas reinhardtii","signal recognition particle 19 kDa protein, putative / SRP19, putative","protein_coding"
"Cre02.g095450","No alias","Chlamydomonas reinhardtii","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Cre02.g109600","No alias","Chlamydomonas reinhardtii","myo-inositol monophosphatase like 1","protein_coding"
"Cre02.g109650","No alias","Chlamydomonas reinhardtii","BEL1-like homeodomain 10","protein_coding"
"Cre02.g112701","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g115150","No alias","Chlamydomonas reinhardtii","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"Cre02.g120100","No alias","Chlamydomonas reinhardtii","ribulose bisphosphate carboxylase small chain 1A","protein_coding"
"Cre02.g142352","No alias","Chlamydomonas reinhardtii","Class II aaRS and biotin synthetases superfamily protein","protein_coding"
"Cre02.g142353","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g145628","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g144627","No alias","Chlamydomonas reinhardtii","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Cre03.g144827","No alias","Chlamydomonas reinhardtii","GCK domain-containing protein","protein_coding"
"Cre03.g146567","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g151650","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre03.g156600","No alias","Chlamydomonas reinhardtii","proton gradient regulation 7","protein_coding"
"Cre03.g174750","No alias","Chlamydomonas reinhardtii","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Cre03.g180450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g181250","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre03.g181400","No alias","Chlamydomonas reinhardtii","para-aminobenzoate (PABA) synthase family protein","protein_coding"
"Cre03.g182500","No alias","Chlamydomonas reinhardtii","SRP72 RNA-binding domain","protein_coding"
"Cre03.g185550","No alias","Chlamydomonas reinhardtii","sedoheptulose-bisphosphatase","protein_coding"
"Cre03.g190100","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 3B-2","protein_coding"
"Cre03.g194450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g196250","No alias","Chlamydomonas reinhardtii","Cysteine proteinases superfamily protein","protein_coding"
"Cre03.g200350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g205050","No alias","Chlamydomonas reinhardtii","diacylglycerol acyltransferase family","protein_coding"
"Cre04.g212500","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF1995)","protein_coding"
"Cre04.g215900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g223300","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding"
"Cre05.g234550","No alias","Chlamydomonas reinhardtii","fructose-bisphosphate aldolase 2","protein_coding"
"Cre05.g243050","No alias","Chlamydomonas reinhardtii","thioredoxin F-type 1","protein_coding"
"Cre05.g247450","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre06.g252200","No alias","Chlamydomonas reinhardtii","translocon at the outer envelope membrane of chloroplasts 34","protein_coding"
"Cre06.g255500","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre06.g259401","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre06.g264250","No alias","Chlamydomonas reinhardtii","Lycopene beta/epsilon cyclase protein","protein_coding"
"Cre06.g265900","No alias","Chlamydomonas reinhardtii","Metal-dependent phosphohydrolase","protein_coding"
"Cre06.g267100","No alias","Chlamydomonas reinhardtii","signal recognition particle-related / SRP-related","protein_coding"
"Cre06.g268600","No alias","Chlamydomonas reinhardtii","glycine-rich protein 2B","protein_coding"
"Cre06.g269050","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre06.g269100","No alias","Chlamydomonas reinhardtii","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Cre06.g278162","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278245","No alias","Chlamydomonas reinhardtii","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding"
"Cre06.g291150","No alias","Chlamydomonas reinhardtii","DEAD box RNA helicase family protein","protein_coding"
"Cre07.g323700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g325500","No alias","Chlamydomonas reinhardtii","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Cre07.g325736","No alias","Chlamydomonas reinhardtii","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding"
"Cre07.g331850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g342150","No alias","Chlamydomonas reinhardtii","Glutamyl-tRNA reductase family protein","protein_coding"
"Cre07.g346400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g346950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g360950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g365632","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2C family protein","protein_coding"
"Cre08.g366050","No alias","Chlamydomonas reinhardtii","nudix hydrolase homolog 3","protein_coding"
"Cre08.g376850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g393200","No alias","Chlamydomonas reinhardtii","mitochondrial HSO70 2","protein_coding"
"Cre09.g393913","No alias","Chlamydomonas reinhardtii","GTP cyclohydrolase I","protein_coding"
"Cre09.g394547","No alias","Chlamydomonas reinhardtii","Carbohydrate-binding-like fold","protein_coding"
"Cre09.g396300","No alias","Chlamydomonas reinhardtii","Flavin containing amine oxidoreductase family","protein_coding"
"Cre09.g407550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g424100","No alias","Chlamydomonas reinhardtii","pyrophosphorylase 6","protein_coding"
"Cre10.g431850","No alias","Chlamydomonas reinhardtii","Phosphoglycerate mutase family protein","protein_coding"
"Cre10.g443500","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF220)","protein_coding"
"Cre10.g451900","No alias","Chlamydomonas reinhardtii","Pyridoxal-5\'-phosphate-dependent enzyme family protein","protein_coding"
"Cre10.g456100","No alias","Chlamydomonas reinhardtii","flavodoxin-like quinone reductase 1","protein_coding"
"Cre10.g456150","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre10.g457700","No alias","Chlamydomonas reinhardtii","calmodulin-domain protein kinase cdpk isoform 2","protein_coding"
"Cre11.g467450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467553","No alias","Chlamydomonas reinhardtii","Translation elongation factor EFG/EF2 protein","protein_coding"
"Cre11.g467689","No alias","Chlamydomonas reinhardtii","photosynthetic electron transfer C","protein_coding"
"Cre11.g467770","No alias","Chlamydomonas reinhardtii","Phosphoglycerate kinase family protein","protein_coding"
"Cre11.g469400","No alias","Chlamydomonas reinhardtii","pseudo-response regulator 3","protein_coding"
"Cre11.g476750","No alias","Chlamydomonas reinhardtii","root FNR 1","protein_coding"
"Cre11.g477625","No alias","Chlamydomonas reinhardtii","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Cre11.g479150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g489002","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g495959","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g496700","No alias","Chlamydomonas reinhardtii","thioredoxin F-type 1","protein_coding"
"Cre12.g498700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g500200","No alias","Chlamydomonas reinhardtii","purple acid phosphatase 27","protein_coding"
"Cre12.g500450","No alias","Chlamydomonas reinhardtii","DNAse I-like superfamily protein","protein_coding"
"Cre12.g508350","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre12.g509050","No alias","Chlamydomonas reinhardtii","PsbP-like protein 1","protein_coding"
"Cre12.g510050","No alias","Chlamydomonas reinhardtii","dicarboxylate diiron protein, putative (Crd1)","protein_coding"
"Cre12.g510400","No alias","Chlamydomonas reinhardtii","rubredoxin family protein","protein_coding"
"Cre12.g510650","No alias","Chlamydomonas reinhardtii","high cyclic electron flow 1","protein_coding"
"Cre12.g514200","No alias","Chlamydomonas reinhardtii","Glucose-methanol-choline (GMC) oxidoreductase family protein","protein_coding"
"Cre12.g531900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g534250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g537641","No alias","Chlamydomonas reinhardtii","MBOAT (membrane bound O-acyl transferase) family protein","protein_coding"
"Cre12.g554800","No alias","Chlamydomonas reinhardtii","phosphoribulokinase","protein_coding"
"Cre12.g557700","No alias","Chlamydomonas reinhardtii","glyoxalase 2-4","protein_coding"
"Cre12.g558900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g569651","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g585500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g602650","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre14.g608350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g611051","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g614800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g615450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g637100","No alias","Chlamydomonas reinhardtii","ubiquitin family protein","protein_coding"
"Cre15.g639503","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre16.g650050","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre16.g659800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g669450","No alias","Chlamydomonas reinhardtii","ATP-dependent protease La (LON) domain protein","protein_coding"
"Cre16.g669452","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g674300","No alias","Chlamydomonas reinhardtii","ankyrin repeat-containing protein 2","protein_coding"
"Cre16.g675000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g677800","No alias","Chlamydomonas reinhardtii","TraB family protein","protein_coding"
"Cre16.g677850","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF1997)","protein_coding"
"Cre16.g679669","No alias","Chlamydomonas reinhardtii","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"Cre16.g683550","No alias","Chlamydomonas reinhardtii","P450 reductase 1","protein_coding"
"Cre17.g696350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g699950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g715500","No alias","Chlamydomonas reinhardtii","Thioredoxin superfamily protein","protein_coding"
"Cre17.g716050","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre17.g724600","No alias","Chlamydomonas reinhardtii","ACD1-like","protein_coding"
"Cre19.g750397","No alias","Chlamydomonas reinhardtii","plastid transcriptionally active 5","protein_coding"
"evm.model.contig_2044.7","No alias","Porphyridium purpureum","(at4g04350 : 993.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (reliability: 1986.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2058.8","No alias","Porphyridium purpureum","(at3g61320 : 106.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2062.18","No alias","Porphyridium purpureum","(at3g18480 : 100.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast.  A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2065.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2065.6","No alias","Porphyridium purpureum","(at2g24270 : 432.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (p81406|gapn_pea : 427.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Pisum sativum (Garden & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2072.5","No alias","Porphyridium purpureum","(at3g06483 : 182.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor.  PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2077.5","No alias","Porphyridium purpureum","(at4g17150 : 194.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G14290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2082.7","No alias","Porphyridium purpureum","(at4g23850 : 345.0) long-chain acyl-CoA synthetase 4 (LACS4); FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G11030.1); Has 52797 Blast hits to 49694 proteins in 3271 species: Archae - 966; Bacteria - 33480; Metazoa - 2301; Fungi - 1946; Plants - 2035; Viruses - 1; Other Eukaryotes - 12068 (source: NCBI BLink). & (q42982|4cl2_orysa : 97.4) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2085.19","No alias","Porphyridium purpureum","(q53n72|mpk15_orysa : 391.0) Mitogen-activated protein kinase 15 (EC 2.7.11.24) (MAP kinase 15) - Oryza sativa (Rice) & (at1g73670 : 384.0) member of MAP Kinase; MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink). & (gnl|cdd|68872 : 121.0) no description available & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2085.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2104.13","No alias","Porphyridium purpureum","(at5g08650 : 781.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o23755|ef2_betvu : 104.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1562.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2122.5","No alias","Porphyridium purpureum","(q42982|4cl2_orysa : 375.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (at3g21240 : 358.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order:  p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 2 (4CL2); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 (TAIR:AT1G51680.1); Has 86092 Blast hits to 78635 proteins in 3758 species: Archae - 1209; Bacteria - 54193; Metazoa - 3597; Fungi - 4717; Plants - 2816; Viruses - 1; Other Eukaryotes - 19559 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2225.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2290.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2293.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2293.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2308.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2324.4","No alias","Porphyridium purpureum","(at4g09620 : 96.3) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); Has 234 Blast hits to 198 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2349.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2350.3","No alias","Porphyridium purpureum","(at2g26540 : 101.0) Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast.  Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype; HEMD; FUNCTIONS IN: uroporphyrinogen-III synthase activity; INVOLVED IN: uroporphyrinogen III biosynthetic process, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase (InterPro:IPR003754); Has 1238 Blast hits to 1238 proteins in 600 species: Archae - 19; Bacteria - 1097; Metazoa - 0; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2353.4","No alias","Porphyridium purpureum","(at1g32080 : 127.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2468.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2538.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3388.7","No alias","Porphyridium purpureum","(at4g01800 : 710.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q36795|seca_spiol : 705.0) Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1420.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3395.9","No alias","Porphyridium purpureum","(at2g35040 : 417.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3415.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3422.5","No alias","Porphyridium purpureum","(at5g41080 : 97.1) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: senescence-related gene 3 (TAIR:AT3G02040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_3426.9","No alias","Porphyridium purpureum","(at1g54350 : 456.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3488.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3490.14","No alias","Porphyridium purpureum","(at4g25080 : 250.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3551.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3835.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_431.16","No alias","Porphyridium purpureum","(at5g13630 : 1748.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 3496.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_436.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4398.11","No alias","Porphyridium purpureum","(at5g22800 : 764.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (reliability: 1528.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4404.13","No alias","Porphyridium purpureum","(at3g63400 : 126.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1). & (q41651|cypb_vicfa : 118.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4406.5","No alias","Porphyridium purpureum","(p43188|kadc_maize : 219.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (at5g35170 : 209.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4435.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4442.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4445.8","No alias","Porphyridium purpureum","(at1g23310 : 498.0) Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.; glutamate:glyoxylate aminotransferase (GGT1); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: alanine-2-oxoglutarate aminotransferase 2 (TAIR:AT1G70580.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52894|ala2_horvu : 424.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 984.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4470.1","No alias","Porphyridium purpureum","(at1g36180 : 717.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qmg2|mcca_orysa : 232.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1434.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4476.26","No alias","Porphyridium purpureum","(at5g54800 : 245.0) Encodes glucose6-Phosphate/phosphate transporter 1.  Essential for pollen maturation and embryo sac development.; glucose 6-phosphate/phosphate translocator 1 (GPT1); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: vacuole organization, pollen maturation, embryo sac development, response to nematode, lipid particle organization; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate/phosphate translocator 2 (TAIR:AT1G61800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49131|tpt_flapr : 235.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Flaveria pringlei & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4490.1","No alias","Porphyridium purpureum","(at1g36180 : 692.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42777|mcca_soybn : 189.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Glycine max (Soybean) & (reliability: 1384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_463.1","No alias","Porphyridium purpureum","(p35055|hem6_soybn : 436.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Glycine max (Soybean) & (at1g03475 : 428.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_494.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_505.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_543.3","No alias","Porphyridium purpureum","(at3g24503 : 140.0) Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase  catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively; aldehyde dehydrogenase 2C4 (ALDH2C4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, coniferyl-aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: phenylpropanoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62142 Blast hits to 61763 proteins in 3025 species: Archae - 475; Bacteria - 35763; Metazoa - 2632; Fungi - 2134; Plants - 1679; Viruses - 0; Other Eukaryotes - 19459 (source: NCBI BLink). & (p28237|badh_betvu : 138.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_555.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_582.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_583.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_592.4","No alias","Porphyridium purpureum","(at3g04790 : 298.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (reliability: 596.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_604.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_604.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_640.5","No alias","Porphyridium purpureum","(at3g10060 : 96.3) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G20810.1); Has 8406 Blast hits to 7908 proteins in 1571 species: Archae - 44; Bacteria - 4267; Metazoa - 1616; Fungi - 433; Plants - 872; Viruses - 0; Other Eukaryotes - 1174 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_640.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_693.1","No alias","Porphyridium purpureum","(at4g35440 : 223.0) Enclodes a choride channel protein that is localized to the thlakoid membrane.; chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_708.1","No alias","Porphyridium purpureum","(at3g61320 : 135.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000025.1","No alias","Cyanophora paradoxa","(at2g47000 : 429.0) Multidrug resistance  P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal  redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.; ATP binding cassette subfamily B4 (ABCB4); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 21 (TAIR:AT3G62150.1); Has 844144 Blast hits to 390751 proteins in 4168 species: Archae - 14748; Bacteria - 659498; Metazoa - 17847; Fungi - 13026; Plants - 10001; Viruses - 45; Other Eukaryotes - 128979 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 353.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.173","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.85","No alias","Cyanophora paradoxa","(at1g03630 : 342.0) Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.; protochlorophyllide oxidoreductase C (POR C); FUNCTIONS IN: oxidoreductase activity, NADPH dehydrogenase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase A (TAIR:AT5G54190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42850|porb_horvu : 337.0) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.256","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000135.1","No alias","Cyanophora paradoxa","(at1g32900 : 423.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (q43092|ssg1_pea : 412.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Pisum sativum (Garden pea) & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.36","No alias","Cyanophora paradoxa","(p09043|g3pa_tobac : 459.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g26650 : 457.0) Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).; glyceraldehyde 3-phosphate dehydrogenase A subunit (GAPA); FUNCTIONS IN: protein binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (TAIR:AT1G12900.1); Has 24893 Blast hits to 24884 proteins in 6192 species: Archae - 47; Bacteria - 10870; Metazoa - 2226; Fungi - 2780; Plants - 3758; Viruses - 0; Other Eukaryotes - 5212 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000178.17","No alias","Cyanophora paradoxa","(o24296|gpx1_pea : 130.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (at4g31870 : 125.0) Encodes glutathione peroxidase.; glutathione peroxidase 7 (GPX7); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 1 (TAIR:AT2G25080.1); Has 8041 Blast hits to 8040 proteins in 1748 species: Archae - 4; Bacteria - 4124; Metazoa - 797; Fungi - 210; Plants - 405; Viruses - 8; Other Eukaryotes - 2493 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.103","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000361.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000367.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000367.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000367.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.32","No alias","Cyanophora paradoxa","(at5g13630 : 185.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000385.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000396.27","No alias","Cyanophora paradoxa",""(o48921|c97b2_soybn : 87.8) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at1g31800 : 87.4) Encodes a protein with β-ring carotenoid hydroxylase activity.; ""cytochrome P450, family 97, subfamily A, polypeptide 3"" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)"","protein_coding"
"evm.model.tig00000545.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000670.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.23","No alias","Cyanophora paradoxa","(at1g50250 : 325.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 323.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000792.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000803.4","No alias","Cyanophora paradoxa","(at3g12520 : 189.0) Encodes a sulfate transporter that in induced under sulfate limitation.; sulfate transporter 4;2 (SULTR4;2); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 4.1 (TAIR:AT5G13550.1). & (q02920|no70_soybn : 113.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000821.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.26","No alias","Cyanophora paradoxa","(at5g10720 : 102.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 97.4) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000889.38","No alias","Cyanophora paradoxa","(at2g29650 : 126.0) Encodes an inorganic phosphate transporter that  is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000903.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.19","No alias","Cyanophora paradoxa","(q9sbn3|ucria_volca : 214.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Volvox carteri & (at4g03280 : 211.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001027.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.27","No alias","Cyanophora paradoxa","(at5g66190 : 347.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase.  It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid.  The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme.  AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.; LEAF FNR 1 (ATLFNR1); FUNCTIONS IN: oxidoreductase activity, electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, poly(U) RNA binding, NADPH dehydrogenase activity, electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: oxidation reduction, photosynthetic electron transport chain, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 7407 Blast hits to 7407 proteins in 1806 species: Archae - 24; Bacteria - 3962; Metazoa - 817; Fungi - 811; Plants - 610; Viruses - 0; Other Eukaryotes - 1183 (source: NCBI BLink). & (p41343|fenr_mescr : 338.0) Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001033.18","No alias","Cyanophora paradoxa","(q9mus9|atpi_mesvi : 233.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Mesostigma viride & (atcg00150 : 214.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001056.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001215.19","No alias","Cyanophora paradoxa","(at1g33290 : 217.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 745 Blast hits to 453 proteins in 163 species: Archae - 0; Bacteria - 369; Metazoa - 12; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001355.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001388.13","No alias","Cyanophora paradoxa","(o22101|hemh_orysa : 414.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (at2g30390 : 413.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis.  FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (reliability: 826.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001471.12","No alias","Cyanophora paradoxa","(at1g51560 : 114.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020537.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.77","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020539.39","No alias","Cyanophora paradoxa","(at5g05200 : 144.0) Protein kinase superfamily protein; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.108","No alias","Cyanophora paradoxa","(at1g04600 : 272.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.112","No alias","Cyanophora paradoxa","(at4g34900 : 201.0) xanthine dehydrogenase  2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink). & (q7xh05|aldo1_orysa : 123.0) Probable aldehyde oxidase 1 (EC 1.2.3.1) (AO-1) - Oryza sativa (Rice) & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.166","No alias","Cyanophora paradoxa","(at5g36880 : 376.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to  fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role  in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in  the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.18","No alias","Cyanophora paradoxa","(at5g13630 : 1562.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 3124.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020557.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.40","No alias","Cyanophora paradoxa","(p42496|phy_adica : 128.0) Phytochrome 1 - Adiantum capillus-veneris (Maidenhair fern) & (at5g35840 : 125.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant  growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020601.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020604.16","No alias","Cyanophora paradoxa","(o82059|g6pi_spiol : 596.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (at5g42740 : 587.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.123","No alias","Cyanophora paradoxa","(at4g04640 : 306.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p05435|atpg_spiol : 306.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Spinacia oleracea (Spinach) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.68","No alias","Cyanophora paradoxa","(at5g47690 : 94.7) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.89","No alias","Cyanophora paradoxa","(at2g44740 : 108.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.92","No alias","Cyanophora paradoxa","(at2g44740 : 140.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.98","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.35","No alias","Cyanophora paradoxa","(at2g38400 : 82.0) alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,; alanine:glyoxylate aminotransferase 3 (AGT3); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020725.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.8","No alias","Cyanophora paradoxa","(at4g18240 : 154.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 119.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020801.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020816.89","No alias","Cyanophora paradoxa","(at1g08540 : 224.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.39","No alias","Cyanophora paradoxa","(at4g11570 : 138.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G10970.1); Has 9886 Blast hits to 9886 proteins in 1971 species: Archae - 106; Bacteria - 8631; Metazoa - 63; Fungi - 26; Plants - 330; Viruses - 0; Other Eukaryotes - 730 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.64","No alias","Cyanophora paradoxa","(at1g07180 : 312.0) Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.; alternative  NAD(P)H dehydrogenase 1 (NDA1); FUNCTIONS IN: NADH dehydrogenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 9792 Blast hits to 9601 proteins in 2135 species: Archae - 248; Bacteria - 7524; Metazoa - 53; Fungi - 647; Plants - 379; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.42","No alias","Cyanophora paradoxa","(p12359|psbo_spiol : 137.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Spinacia oleracea (Spinach) & (at5g66570 : 129.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type.; PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020927.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.67","No alias","Cyanophora paradoxa","(at3g58130 : 127.0) N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyl phosphatidylinositol deacetylase (InterPro:IPR003737); BEST Arabidopsis thaliana protein match is: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (TAIR:AT2G27340.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.95","No alias","Cyanophora paradoxa","(at1g28010 : 144.0) P-glycoprotein 14 (PGP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 13 (TAIR:AT1G27940.1); Has 862231 Blast hits to 397322 proteins in 4187 species: Archae - 14893; Bacteria - 671155; Metazoa - 18443; Fungi - 12341; Plants - 9398; Viruses - 47; Other Eukaryotes - 135954 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 141.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020944.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.26","No alias","Cyanophora paradoxa","(at1g30070 : 117.0) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021015.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021017.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.67","No alias","Cyanophora paradoxa","(at3g49660 : 177.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p49026|gblp_tobac : 144.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana tabacum (Common tobacco) & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.110","No alias","Cyanophora paradoxa","(at5g22140 : 86.7) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT3G44190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00021105.50","No alias","Cyanophora paradoxa","(at5g51820 : 383.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional  PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (q9smm0|pgmp_brana : 382.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Brassica napus (Rape) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021108.19","No alias","Cyanophora paradoxa","(at1g04600 : 533.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021168.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021244.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021312.23","No alias","Cyanophora paradoxa","(at4g33650 : 319.0) Encodes a protein with high sequence similarity to the dynamin superfamily.  Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021326.43","No alias","Cyanophora paradoxa","(at1g54350 : 208.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021352.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.30","No alias","Cyanophora paradoxa","(at1g75210 : 395.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5&apos;-nucleotidase (InterPro:IPR008380), Purine 5&apos;-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021435.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021532.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.28","No alias","Cyanophora paradoxa","(at4g17910 : 122.0) transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021612.40","No alias","Cyanophora paradoxa","(at5g54310 : 154.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.  Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021721.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G063800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G079100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.01G152900","No alias","Glycine max","Long-chain fatty alcohol dehydrogenase family protein","protein_coding"
"Glyma.01G170200","No alias","Glycine max","beta-galactosidase 3","protein_coding"
"Glyma.01G179400","No alias","Glycine max","cytochrome P450, family 71, subfamily B, polypeptide 34","protein_coding"
"Glyma.01G226000","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.02G001000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.02G022300","No alias","Glycine max","homeobox 1","protein_coding"
"Glyma.02G037100","No alias","Glycine max","cysteine-rich RLK (RECEPTOR-like protein kinase) 2","protein_coding"
"Glyma.02G107200","No alias","Glycine max","Protein of unknown function (DUF1666)","protein_coding"
"Glyma.02G108600","No alias","Glycine max","cycling DOF factor 2","protein_coding"
"Glyma.02G153500","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.02G168000","No alias","Glycine max","homogentisate prenyltransferase","protein_coding"
"Glyma.02G218300","No alias","Glycine max","Glutamyl-tRNA reductase family protein","protein_coding"
"Glyma.02G298000","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.03G092500","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.03G119500","No alias","Glycine max","dicarboxylate diiron protein, putative (Crd1)","protein_coding"
"Glyma.03G137000","No alias","Glycine max","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Glyma.03G165200","No alias","Glycine max","Long-chain fatty alcohol dehydrogenase family protein","protein_coding"
"Glyma.03G165400","No alias","Glycine max","no pollen germination related 2","protein_coding"
"Glyma.03G177300","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.03G252200","No alias","Glycine max","Protein of Unknown Function (DUF239)","protein_coding"
"Glyma.03G260300","No alias","Glycine max","3-ketoacyl-CoA synthase 1","protein_coding"
"Glyma.04G013500","No alias","Glycine max","unknown seed protein like 1","protein_coding"
"Glyma.04G065600","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.04G103100","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.04G151600","No alias","Glycine max","fatty acyl-ACP thioesterases B","protein_coding"
"Glyma.04G168300","No alias","Glycine max","cycling DOF factor 3","protein_coding"
"Glyma.04G218900","No alias","Glycine max","general control non-repressible 5","protein_coding"
"Glyma.04G220200","No alias","Glycine max","ABC2 homolog 13","protein_coding"
"Glyma.04G249400","No alias","Glycine max","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding"
"Glyma.04G254700","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Glyma.05G025300","No alias","Glycine max","D-ribulose-5-phosphate-3-epimerase","protein_coding"
"Glyma.05G030900","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.05G051300","No alias","Glycine max","PGR5-LIKE A","protein_coding"
"Glyma.05G056000","No alias","Glycine max","Plant-specific transcription factor YABBY family protein","protein_coding"
"Glyma.05G070600","No alias","Glycine max","nitrate transporter 1.5","protein_coding"
"Glyma.05G090600","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.05G118300","No alias","Glycine max","dentin sialophosphoprotein-related","protein_coding"
"Glyma.05G166800","No alias","Glycine max","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding"
"Glyma.05G178500","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.05G196100","No alias","Glycine max","diacylglycerol kinase 2","protein_coding"
"Glyma.05G208500","No alias","Glycine max","Protein of unknown function (DUF3741)","protein_coding"
"Glyma.05G214900","No alias","Glycine max","SPA1-related 2","protein_coding"
"Glyma.05G246500","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.05G247800","No alias","Glycine max","purple acid phosphatase 3","protein_coding"
"Glyma.06G033700","No alias","Glycine max","J-domain protein required for chloroplast accumulation response 1","protein_coding"
"Glyma.06G105200","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.06G107400","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Glyma.06G118100","No alias","Glycine max","UDP-sugar pyrophosphorylase","protein_coding"
"Glyma.06G119500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G171700","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.06G211300","No alias","Glycine max","fatty acyl-ACP thioesterases B","protein_coding"
"Glyma.06G214700","No alias","Glycine max","SOUL heme-binding family protein","protein_coding"
"Glyma.06G283400","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.07G001400","No alias","Glycine max","Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding"
"Glyma.07G048500","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.07G049900","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.07G091400","No alias","Glycine max","B-box type zinc finger protein with CCT domain","protein_coding"
"Glyma.07G141900","No alias","Glycine max","Protein of unknown function (DUF3527)","protein_coding"
"Glyma.07G165300","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.07G184800","No alias","Glycine max","K+ efflux antiporter 3","protein_coding"
"Glyma.07G229600","No alias","Glycine max","cycling DOF factor 2","protein_coding"
"Glyma.07G230200","No alias","Glycine max","homeobox protein 30","protein_coding"
"Glyma.07G235500","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.07G263300","No alias","Glycine max","ERD (early-responsive to dehydration stress) family protein","protein_coding"
"Glyma.08G056200","No alias","Glycine max","Protein of unknown function (DUF760)","protein_coding"
"Glyma.08G115700","No alias","Glycine max","Hydrolase-like protein family","protein_coding"
"Glyma.08G124900","No alias","Glycine max","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding"
"Glyma.08G137500","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.08G140900","No alias","Glycine max","ABC2 homolog 13","protein_coding"
"Glyma.08G160900","No alias","Glycine max","ABC transporter family protein","protein_coding"
"Glyma.08G164800","No alias","Glycine max","Cation efflux family protein","protein_coding"
"Glyma.08G179400","No alias","Glycine max","dentin sialophosphoprotein-related","protein_coding"
"Glyma.08G190700","No alias","Glycine max","multidrug resistance-associated protein 6","protein_coding"
"Glyma.08G236000","No alias","Glycine max","methionine sulfoxide reductase B 1","protein_coding"
"Glyma.08G281700","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.08G303900","No alias","Glycine max","phytochrome interacting factor 4","protein_coding"
"Glyma.08G326000","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.08G334100","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.09G017900","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.09G073700","No alias","Glycine max","Phosphoinositide phosphatase family protein","protein_coding"
"Glyma.09G184600","No alias","Glycine max","B-box type zinc finger protein with CCT domain","protein_coding"
"Glyma.09G187300","No alias","Glycine max","Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein","protein_coding"
"Glyma.09G198900","No alias","Glycine max","Disease resistance-responsive (dirigent-like protein) family protein","protein_coding"
"Glyma.09G246100","No alias","Glycine max","Thioesterase/thiol ester dehydrase-isomerase superfamily protein","protein_coding"
"Glyma.10G001800","No alias","Glycine max","3-ketoacyl-CoA synthase 11","protein_coding"
"Glyma.10G020800","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.10G060700","No alias","Glycine max","spermidine hydroxycinnamoyl transferase","protein_coding"
"Glyma.10G094900","No alias","Glycine max","Peptidase S41 family protein","protein_coding"
"Glyma.10G097800","No alias","Glycine max","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Glyma.10G221000","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.10G238300","No alias","Glycine max","IQ-domain 24","protein_coding"
"Glyma.10G274400","No alias","Glycine max","3-ketoacyl-CoA synthase 6","protein_coding"
"Glyma.11G078300","No alias","Glycine max","histidine kinase 1","protein_coding"
"Glyma.11G120900","No alias","Glycine max","4-hydroxy-3-methylbut-2-enyl diphosphate reductase","protein_coding"
"Glyma.11G192300","No alias","Glycine max","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding"
"Glyma.11G232600","No alias","Glycine max","ferritin 4","protein_coding"
"Glyma.12G002000","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Glyma.12G013300","No alias","Glycine max","sigma factor A","protein_coding"
"Glyma.12G057400","No alias","Glycine max","aldehyde dehydrogenase 3F1","protein_coding"
"Glyma.12G082100","No alias","Glycine max","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding"
"Glyma.12G103900","No alias","Glycine max","Outer arm dynein light chain 1 protein","protein_coding"
"Glyma.12G148900","No alias","Glycine max","NAC domain containing protein  2","protein_coding"
"Glyma.13G007200","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G096500","No alias","Glycine max","P450 reductase 2","protein_coding"
"Glyma.13G114800","No alias","Glycine max","phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding"
"Glyma.13G122400","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.13G318700","No alias","Glycine max","Plant protein of unknown function (DUF868)","protein_coding"
"Glyma.13G321300","No alias","Glycine max","Ring/U-Box superfamily protein","protein_coding"
"Glyma.13G327000","No alias","Glycine max","beta-galactosidase 8","protein_coding"
"Glyma.13G350000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.14G015700","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.14G099000","No alias","Glycine max","cytokinin oxidase 7","protein_coding"
"Glyma.14G141000","No alias","Glycine max","BURP domain-containing protein","protein_coding"
"Glyma.14G185700","No alias","Glycine max","Glutamyl-tRNA reductase family protein","protein_coding"
"Glyma.14G192100","No alias","Glycine max","FTSH protease 9","protein_coding"
"Glyma.14G216100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.15G038000","No alias","Glycine max","protein kinase 1B","protein_coding"
"Glyma.15G053000","No alias","Glycine max","dentin sialophosphoprotein-related","protein_coding"
"Glyma.15G085500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G103700","No alias","Glycine max","CBS domain-containing protein with a domain of unknown function (DUF21)","protein_coding"
"Glyma.15G108000","No alias","Glycine max","starch synthase 3","protein_coding"
"Glyma.15G116300","No alias","Glycine max","SCARECROW-like 13","protein_coding"
"Glyma.15G177500","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Glyma.15G195700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G213600","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding"
"Glyma.15G229400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G262300","No alias","Glycine max","Cation efflux family protein","protein_coding"
"Glyma.16G017400","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.16G029000","No alias","Glycine max","G-box binding factor 3","protein_coding"
"Glyma.16G038300","No alias","Glycine max","Cobalamin-independent synthase family protein","protein_coding"
"Glyma.16G095000","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding"
"Glyma.16G142300","No alias","Glycine max","PQ-loop repeat family protein / transmembrane family protein","protein_coding"
"Glyma.16G158700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.17G064600","No alias","Glycine max","4-coumarate:CoA ligase 2","protein_coding"
"Glyma.17G069100","No alias","Glycine max","Fatty acid hydroxylase superfamily","protein_coding"
"Glyma.17G090900","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.17G099800","No alias","Glycine max","myb domain protein 94","protein_coding"
"Glyma.17G133200","No alias","Glycine max","PGR5-LIKE A","protein_coding"
"Glyma.17G134100","No alias","Glycine max","cytochrome P450, family 706, subfamily A, polypeptide 4","protein_coding"
"Glyma.17G194300","No alias","Glycine max","Exostosin family protein","protein_coding"
"Glyma.17G225700","No alias","Glycine max","cytokinin oxidase 7","protein_coding"
"Glyma.18G001500","No alias","Glycine max","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Glyma.18G115700","No alias","Glycine max","phytochrome interacting factor 4","protein_coding"
"Glyma.18G206500","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.18G216200","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.18G240500","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.18G242700","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding"
"Glyma.19G005900","No alias","Glycine max","phosphoenolpyruvate (pep)/phosphate translocator 2","protein_coding"
"Glyma.19G017200","No alias","Glycine max","Sugar isomerase (SIS) family protein","protein_coding"
"Glyma.19G045800","No alias","Glycine max","Rhomboid-related intramembrane serine protease family protein","protein_coding"
"Glyma.19G123400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G123800","No alias","Glycine max","dicarboxylate diiron protein, putative (Crd1)","protein_coding"
"Glyma.19G139300","No alias","Glycine max","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Glyma.19G159000","No alias","Glycine max","sulfate transporter 3;1","protein_coding"
"Glyma.19G177600","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding"
"Glyma.19G222500","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.19G261700","No alias","Glycine max","STRUBBELIG-receptor family 6","protein_coding"
"Glyma.20G017100","No alias","Glycine max","sulfate transporter 91","protein_coding"
"Glyma.20G042200","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.20G115500","No alias","Glycine max","3-ketoacyl-CoA synthase 6","protein_coding"
"Glyma.20G136100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G156200","No alias","Glycine max","IQ-domain 24","protein_coding"
"GRMZM2G000118","No alias","Zea mays","diacylglycerol kinase 6","protein_coding"
"GRMZM2G001696","No alias","Zea mays","phosphoenolpyruvate carboxykinase 1","protein_coding"
"GRMZM2G002075","No alias","Zea mays","abscisic acid responsive element-binding factor 1","protein_coding"
"GRMZM2G002391","No alias","Zea mays","equilibrative nucleotide transporter 1","protein_coding"
"GRMZM2G005260","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G006937","No alias","Zea mays","cycloartenol synthase 1","protein_coding"
"GRMZM2G009593","No alias","Zea mays","BRI1 suppressor 1 (BSU1)-like 2","protein_coding"
"GRMZM2G010349","No alias","Zea mays","STT7 homolog STN7","protein_coding"
"GRMZM2G012397","No alias","Zea mays","photosystem I subunit K","protein_coding"
"GRMZM2G016393","No alias","Zea mays","Ribosomal protein S4 (RPS4A) family protein","protein_coding"
"GRMZM2G017865","No alias","Zea mays","SEUSS transcriptional co-regulator","protein_coding"
"GRMZM2G023289","No alias","Zea mays","Phosphoglucomutase/phosphomannomutase family protein","protein_coding"
"GRMZM2G023557","No alias","Zea mays","RAD-like 1","protein_coding"
"GRMZM2G026024","No alias","Zea mays","phosphoribulokinase","protein_coding"
"GRMZM2G028104","No alias","Zea mays","HXXXD-type acyl-transferase family protein","protein_coding"
"GRMZM2G036007","No alias","Zea mays","Inositol monophosphatase family protein","protein_coding"
"GRMZM2G039988","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G049672","No alias","Zea mays","zinc ion binding","protein_coding"
"GRMZM2G051709","No alias","Zea mays","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"GRMZM2G064001","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"GRMZM2G065203","No alias","Zea mays","glycerol-3-phosphate acyltransferase 1","protein_coding"
"GRMZM2G068220","No alias","Zea mays","Xanthine/uracil permease family protein","protein_coding"
"GRMZM2G072205","No alias","Zea mays","fatty acid biosynthesis 1","protein_coding"
"GRMZM2G072280","No alias","Zea mays","photosystem I light harvesting complex gene 2","protein_coding"
"GRMZM2G083915","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G085019","No alias","Zea mays","NADP-malic enzyme 4","protein_coding"
"GRMZM2G085646","No alias","Zea mays","photosystem I subunit F","protein_coding"
"GRMZM2G086258","No alias","Zea mays","dicarboxylate transport 2.1","protein_coding"
"GRMZM2G088064","No alias","Zea mays","alanine aminotransferase 2","protein_coding"
"GRMZM2G097457","No alias","Zea mays","pyruvate orthophosphate dikinase","protein_coding"
"GRMZM2G104419","No alias","Zea mays","Inorganic H pyrophosphatase family protein","protein_coding"
"GRMZM2G108273","No alias","Zea mays","tonoplast intrinsic protein 4;1","protein_coding"
"GRMZM2G113033","No alias","Zea mays","Ribulose bisphosphate carboxylase (small chain) family protein","protein_coding"
"GRMZM2G115805","No alias","Zea mays","FMN-linked oxidoreductases superfamily protein","protein_coding"
"GRMZM2G121237","No alias","Zea mays","glycosyltransferase family protein 47","protein_coding"
"GRMZM2G122413","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G122479","No alias","Zea mays","NADP-malic enzyme 4","protein_coding"
"GRMZM2G132547","No alias","Zea mays","CTP synthase family protein","protein_coding"
"GRMZM2G135283","No alias","Zea mays","serine transhydroxymethyltransferase 1","protein_coding"
"GRMZM2G139647","No alias","Zea mays","Ribosomal protein S4 (RPS4A) family protein","protein_coding"
"GRMZM2G144273","No alias","Zea mays","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"GRMZM2G145133","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G145589","No alias","Zea mays","Subtilase family protein","protein_coding"
"GRMZM2G146118","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G151254","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding"
"GRMZM2G153184","No alias","Zea mays","light-harvesting chlorophyll-protein complex I subunit A4","protein_coding"
"GRMZM2G153611","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G154221","No alias","Zea mays","Plant protein 1589 of unknown function","protein_coding"
"GRMZM2G158097","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G158662","No alias","Zea mays","photolyase/blue-light receptor 2","protein_coding"
"GRMZM2G159008","No alias","Zea mays","DNAse I-like superfamily protein","protein_coding"
"GRMZM2G160268","No alias","Zea mays","light-harvesting chlorophyll-protein complex I subunit A4","protein_coding"
"GRMZM2G162749","No alias","Zea mays","cycling DOF factor 1","protein_coding"
"GRMZM2G172491","No alias","Zea mays","cytochrome P450, family 71, subfamily A, polypeptide 24","protein_coding"
"GRMZM2G172834","No alias","Zea mays","annexin 5","protein_coding"
"GRMZM2G176209","No alias","Zea mays","NOD26-like intrinsic protein 5;1","protein_coding"
"GRMZM2G177150","No alias","Zea mays","glycerol-3-phosphate acyltransferase 1","protein_coding"
"GRMZM2G180389","No alias","Zea mays","ORMDL family protein","protein_coding"
"GRMZM2G306345","No alias","Zea mays","pyruvate orthophosphate dikinase","protein_coding"
"GRMZM2G319357","No alias","Zea mays","protein tyrosine phosphatases;protein tyrosine phosphatases","protein_coding"
"GRMZM2G323024","No alias","Zea mays","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"GRMZM2G338631","No alias","Zea mays","type one serine/threonine protein phosphatase 2","protein_coding"
"GRMZM2G367251","No alias","Zea mays","glucan synthase-like 5","protein_coding"
"GRMZM2G390076","No alias","Zea mays","type one serine/threonine protein phosphatase 4","protein_coding"
"GRMZM2G397242","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G429938","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G868222","No alias","Zea mays","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"GRMZM5G870932","No alias","Zea mays","phosphoenolpyruvate carboxykinase 1","protein_coding"
"GRMZM5G872549","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G876898","No alias","Zea mays","Glycine cleavage T-protein family","protein_coding"
"GRMZM6G910544","No alias","Zea mays","Function unknown","protein_coding"
"HORVU0Hr1G017790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G017960.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G018380.1","No alias","Hordeum vulgare","lipoamide-containing component *(H-protein) of glycine cleavage system","protein_coding"
"HORVU0Hr1G020630.1","No alias","Hordeum vulgare","EC_2.1 transferase transferring one-carbon group","protein_coding"
"HORVU1Hr1G007810.3","No alias","Hordeum vulgare","EC_2.4 glycosyltransferase","protein_coding"
"HORVU1Hr1G035090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G044680.1","No alias","Hordeum vulgare","protochlorophyllide oxidoreductase *(POR) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"HORVU1Hr1G045590.2","No alias","Hordeum vulgare","glutamyl-tRNA reductase *(HEMA) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"HORVU1Hr1G057860.6","No alias","Hordeum vulgare","cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase acting on CH-NH group of donor","protein_coding"
"HORVU1Hr1G071180.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G078380.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU1Hr1G088870.2","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU1Hr1G088900.2","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU1Hr1G088920.3","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU1Hr1G089180.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU2Hr1G019270.2","No alias","Hordeum vulgare","component *(PsbX) of PS-II complex","protein_coding"
"HORVU2Hr1G023540.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G023560.2","No alias","Hordeum vulgare","component *(CHLH) of magnesium-chelatase complex & abscisic acid perception modulator *(ABAR)","protein_coding"
"HORVU2Hr1G026980.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G061190.2","No alias","Hordeum vulgare","amino acid transporter *(AAP)","protein_coding"
"HORVU2Hr1G069440.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G074280.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G079920.4","No alias","Hordeum vulgare","component *(LHCb6) of LHC-II complex","protein_coding"
"HORVU2Hr1G099450.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G014790.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G024400.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G039930.2","No alias","Hordeum vulgare","catalytic component *(CRD1) of Mg-protoporphyrin IX monomethylester cyclase complex","protein_coding"
"HORVU3Hr1G042680.5","No alias","Hordeum vulgare","circadian clock transcriptional co-activator *(LNK)","protein_coding"
"HORVU3Hr1G067620.1","No alias","Hordeum vulgare","alpha amylase","protein_coding"
"HORVU3Hr1G084970.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G116740.1","No alias","Hordeum vulgare","MYB class-R2R3 transcription factor","protein_coding"
"HORVU3Hr1G116790.2","No alias","Hordeum vulgare","tonoplast intrinsic protein *(TIP)","protein_coding"
"HORVU4Hr1G001540.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G003420.5","No alias","Hordeum vulgare","calcium-permeable channel *(OSCA)","protein_coding"
"HORVU4Hr1G039880.1","No alias","Hordeum vulgare","regulatory protein *(LESV) involved in organization of starch granule matrix","protein_coding"
"HORVU4Hr1G067510.4","No alias","Hordeum vulgare","ferric-citrate complex transporter *(FRD) & metal-citrate complex transporter *(FRD)","protein_coding"
"HORVU4Hr1G074810.5","No alias","Hordeum vulgare","phosphopentose epimerase & EC_5.1 racemase or epimerase","protein_coding"
"HORVU4Hr1G074990.1","No alias","Hordeum vulgare","transcription factor *(DOF)","protein_coding"
"HORVU5Hr1G025560.1","No alias","Hordeum vulgare","glutaredoxin","protein_coding"
"HORVU5Hr1G041530.9","No alias","Hordeum vulgare","transport protein *(TSUP)","protein_coding"
"HORVU5Hr1G046260.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G071920.1","No alias","Hordeum vulgare","component *(PsaG) of PS-I complex","protein_coding"
"HORVU5Hr1G082420.2","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU5Hr1G093310.11","No alias","Hordeum vulgare","regulatory protein *(PIF) of red/far-red light perception & bHLH-type transcription factor","protein_coding"
"HORVU5Hr1G098980.12","No alias","Hordeum vulgare","IMP/GMP-specific phosphohydrolase","protein_coding"
"HORVU5Hr1G102240.2","No alias","Hordeum vulgare","bHLH-type transcription factor","protein_coding"
"HORVU5Hr1G104080.8","No alias","Hordeum vulgare","LRR-VI-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G109360.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU6Hr1G001980.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G016850.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU6Hr1G016880.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU6Hr1G016890.6","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU6Hr1G016940.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU6Hr1G031650.5","No alias","Hordeum vulgare","carotenoid hydroxylase & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU6Hr1G050440.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G069190.15","No alias","Hordeum vulgare","EC_1.6 oxidoreductase acting on NADH or NADPH & monodehydroascorbate reductase *(MDAR)","protein_coding"
"HORVU6Hr1G075950.13","No alias","Hordeum vulgare","starch synthase *(SS2) & EC_2.4 glycosyltransferase","protein_coding"
"HORVU6Hr1G089190.3","No alias","Hordeum vulgare","phosphate transporter *(PHO) & phosphate transporter *(PHO1)","protein_coding"
"HORVU6Hr1G091660.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU7Hr1G002600.1","No alias","Hordeum vulgare","solute transporter *(UmamiT)","protein_coding"
"HORVU7Hr1G037000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G037180.1","No alias","Hordeum vulgare","subgroup ERF-I transcription factor","protein_coding"
"HORVU7Hr1G040370.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU7Hr1G040380.5","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU7Hr1G046040.1","No alias","Hordeum vulgare","carboxy-terminal processing peptidase *(CtpA)","protein_coding"
"HORVU7Hr1G046320.1","No alias","Hordeum vulgare","component *(LHCa1) of LHC-I complex","protein_coding"
"HORVU7Hr1G047690.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G058120.1","No alias","Hordeum vulgare","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"HORVU7Hr1G069500.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G069520.2","No alias","Hordeum vulgare","basal Sigma-type transcription factor","protein_coding"
"HORVU7Hr1G098670.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G120660.5","No alias","Hordeum vulgare","phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Kfl00001_0290","kfl00001_0290_v1.1","Klebsormidium nitens","(at5g01100 : 234.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"Kfl00002_0740","kfl00002_0740_v1.1","Klebsormidium nitens","(at1g55860 : 124.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00008_0110","kfl00008_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00009_0500","kfl00009_0500_v1.1","Klebsormidium nitens","(p13869|cb12_pethy : 139.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 138.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0510","kfl00009_0510_v1.1","Klebsormidium nitens","(at3g54890 : 130.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (p13869|cb12_pethy : 125.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0780","kfl00009_0780_v1.1","Klebsormidium nitens","(at5g02860 : 218.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 180.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0380","kfl00010_0380_v1.1","Klebsormidium nitens","(at3g06080 : 143.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"Kfl00014_0480","kfl00014_0480_v1.1","Klebsormidium nitens","(at3g01480 : 448.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49939|tlp40_spiol : 444.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 896.0) &  (original description: no original description)","protein_coding"
"Kfl00025_0070","kfl00025_0070_v1.1","Klebsormidium nitens","(q42967|dcup_tobac : 323.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at3g14930 : 322.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"Kfl00025_0250","kfl00025_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00026_0370","kfl00026_0370_v1.1","Klebsormidium nitens","(at5g51300 : 504.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 1008.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0090","kfl00030_0090_v1.1","Klebsormidium nitens","(p24258|cah2_chlre : 108.0) Carbonic anhydrase 2 precursor (EC 4.2.1.1) (Carbonate dehydratase 2) (CA2) [Contains: Carbonic anhydrase 2 large chain; Carbonic anhydrase 2 small chain] - Chlamydomonas reinhardtii & (at1g08065 : 103.0) alpha carbonic anhydrase 5 (ACA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3351 Blast hits to 3338 proteins in 543 species: Archae - 0; Bacteria - 710; Metazoa - 2051; Fungi - 82; Plants - 328; Viruses - 7; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0120","kfl00032_0120_v1.1","Klebsormidium nitens","(at3g18890 : 252.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"Kfl00034_0050","kfl00034_0050_v1.1","Klebsormidium nitens","(at1g04870 : 439.0) Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro.  Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 10 (PRMT10); FUNCTIONS IN: histone-arginine N-methyltransferase activity, methyltransferase activity, protein-arginine omega-N asymmetric methyltransferase activity, [myelin basic protein]-arginine N-methyltransferase activity, protein-arginine omega-N monomethyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, peptidyl-arginine methylation, to asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast hits to 3335 proteins in 890 species: Archae - 50; Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants - 354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI BLink). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"Kfl00034_0060","kfl00034_0060_v1.1","Klebsormidium nitens","(at1g65980 : 167.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00037_0220","kfl00037_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00037_0410","kfl00037_0410_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00038_0060","kfl00038_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00040_0280","kfl00040_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00043_0300","kfl00043_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00043_0340","kfl00043_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00044_0140","kfl00044_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00046_0270","kfl00046_0270_v1.1","Klebsormidium nitens","(at5g57160 : 786.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 592.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1572.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0340","kfl00054_0340_v1.1","Klebsormidium nitens","(at3g51950 : 181.0) Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G63450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"Kfl00059_0280","kfl00059_0280_v1.1","Klebsormidium nitens","(at3g56940 : 584.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots.  Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (q6sjv8|crd1_goshi : 577.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) - Gossypium hirsutum (Upland cotton) & (reliability: 1168.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0230","kfl00061_0230_v1.1","Klebsormidium nitens","(at1g68810 : 108.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0240","kfl00061_0240_v1.1","Klebsormidium nitens","(at4g25120 : 114.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase.  The Arabidopsis SRS2 is a functional 3í- to 5í-helicase.  Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00062_0150","kfl00062_0150_v1.1","Klebsormidium nitens","(q39817|calx_soybn : 515.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 504.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1008.0) &  (original description: no original description)","protein_coding"
"Kfl00065_0180","kfl00065_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00070_0210","kfl00070_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00081_0020","kfl00081_0020_v1.1","Klebsormidium nitens","(at3g10940 : 80.9) dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"Kfl00085_0310","kfl00085_0310_v1.1","Klebsormidium nitens","(at5g51230 : 92.4) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"Kfl00098_0060","kfl00098_0060_v1.1","Klebsormidium nitens","(q40070|psbr_horvu : 102.0) Photosystem II 10 kDa polypeptide, chloroplast precursor - Hordeum vulgare (Barley) & (at1g79040 : 84.7) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"Kfl00098_0260","kfl00098_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00103_0020","kfl00103_0020_v1.1","Klebsormidium nitens","(at5g10720 : 101.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (o49230|etr1_braol : 94.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"Kfl00103_0180","kfl00103_0180_v1.1","Klebsormidium nitens","(at2g36310 : 333.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase  2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"Kfl00103_0190","kfl00103_0190_v1.1","Klebsormidium nitens","(at5g24930 : 204.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"Kfl00104_0100","kfl00104_0100_v1.1","Klebsormidium nitens",""(at2g34720 : 112.0) ""nuclear factor Y, subunit A4"" (NF-YA4); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A7 (TAIR:AT1G30500.2); Has 682 Blast hits to 682 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 131; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)"","protein_coding"
"Kfl00106_0270","kfl00106_0270_v1.1","Klebsormidium nitens","(at1g06150 : 147.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"Kfl00108_0050","kfl00108_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00108_0260","kfl00108_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00108_0265","kfl00108_0265_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00114_0260","kfl00114_0260_v1.1","Klebsormidium nitens","(at1g74730 : 155.0) Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"Kfl00118_0320","kfl00118_0320_v1.1","Klebsormidium nitens","(at5g13630 : 635.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0240","kfl00137_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00137_0250","kfl00137_0250_v1.1","Klebsormidium nitens","(at5g13630 : 2070.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4140.0) &  (original description: no original description)","protein_coding"
"Kfl00139_0170","kfl00139_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00139_0340","kfl00139_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00147_0170","kfl00147_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00154_0060","kfl00154_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00164_0220","kfl00164_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00182_0140","kfl00182_0140_v1.1","Klebsormidium nitens","(at2g41720 : 351.0) EMBRYO DEFECTIVE 2654 (EMB2654); INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 227.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 702.0) &  (original description: no original description)","protein_coding"
"Kfl00191_0110","kfl00191_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00197_0080","kfl00197_0080_v1.1","Klebsormidium nitens","(at2g36310 : 119.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase  2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"Kfl00208_0120","kfl00208_0120_v1.1","Klebsormidium nitens","(at1g27680 : 632.0) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q00081|glgl1_soltu : 612.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (reliability: 1264.0) &  (original description: no original description)","protein_coding"
"Kfl00214_0120","kfl00214_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00231_0150","kfl00231_0150_v1.1","Klebsormidium nitens","(at4g10020 : 197.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include:   At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463).  Two copies of HSD1 and HSD4 exist due to a gene duplication event.  In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00233_0130","kfl00233_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00236_0070","kfl00236_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00242_0030","kfl00242_0030_v1.1","Klebsormidium nitens","(at1g12800 : 166.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"Kfl00244_0030","kfl00244_0030_v1.1","Klebsormidium nitens","(at2g13360 : 577.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"Kfl00260_0200","kfl00260_0200_v1.1","Klebsormidium nitens","(q39491|ptp3_chleu : 85.1) Dual specificity protein phosphatase (EC 3.1.3.48) (EC 3.1.3.16) - Chlamydomonas eugametos & (at3g23610 : 82.4) Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding.; dual specificity protein phosphatase 1 (DSPTP1); CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase (InterPro:IPR020417), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00275_0040","kfl00275_0040_v1.1","Klebsormidium nitens","(p80030|fabi_brana : 426.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 422.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex.  A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (reliability: 844.0) &  (original description: no original description)","protein_coding"
"Kfl00276_0010","kfl00276_0010_v1.1","Klebsormidium nitens","(at1g15820 : 338.0) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (p36494|cb4_spiol : 335.0) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"Kfl00278_0030","kfl00278_0030_v1.1","Klebsormidium nitens","(at2g35710 : 350.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"Kfl00292_0160","kfl00292_0160_v1.1","Klebsormidium nitens","(at4g14500 : 197.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G23080.1); Has 214 Blast hits to 213 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"Kfl00312_0060","kfl00312_0060_v1.1","Klebsormidium nitens","(at5g38990 : 261.0) Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT5G39000.1); Has 116479 Blast hits to 115116 proteins in 4449 species: Archae - 93; Bacteria - 13074; Metazoa - 43265; Fungi - 9919; Plants - 32974; Viruses - 372; Other Eukaryotes - 16782 (source: NCBI BLink). & (q8lkz1|nork_pea : 247.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"Kfl00328_0090","kfl00328_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00336_0040","kfl00336_0040_v1.1","Klebsormidium nitens","(at5g46290 : 624.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 619.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1248.0) &  (original description: no original description)","protein_coding"
"Kfl00379_0120","kfl00379_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00385_0010","kfl00385_0010_v1.1","Klebsormidium nitens","(at3g21215 : 82.4) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G42240.1); Has 5454 Blast hits to 2765 proteins in 341 species: Archae - 4; Bacteria - 269; Metazoa - 1333; Fungi - 651; Plants - 2326; Viruses - 357; Other Eukaryotes - 514 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00416_0100","kfl00416_0100_v1.1","Klebsormidium nitens","(q03684|bip4_tobac : 984.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 972.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family.  BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (reliability: 1944.0) &  (original description: no original description)","protein_coding"
"Kfl00418_0150","kfl00418_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00428_0100","kfl00428_0100_v1.1","Klebsormidium nitens","(at1g20880 : 155.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1). & (q03878|grp1_dauca : 82.8) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"Kfl00428_g10","kfl00428_g10_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00443_0020","kfl00443_0020_v1.1","Klebsormidium nitens","(at3g22850 : 85.1) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 1324 Blast hits to 1324 proteins in 483 species: Archae - 0; Bacteria - 791; Metazoa - 46; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"Kfl00452_0090","kfl00452_0090_v1.1","Klebsormidium nitens","(at1g64860 : 163.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"Kfl00457_0110","kfl00457_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00465_0110","kfl00465_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00470_g8","kfl00470_g8_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00478_0030","kfl00478_0030_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding"
"Kfl00494_0060","kfl00494_0060_v1.1","Klebsormidium nitens","(at1g27320 : 168.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o49230|etr1_braol : 107.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"Kfl00505_0020","kfl00505_0020_v1.1","Klebsormidium nitens","(at5g05740 : 265.0) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00506_0050","kfl00506_0050_v1.1","Klebsormidium nitens",""(at1g07110 : 588.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; ""fructose-2,6-bisphosphatase"" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 1176.0) &  (original description: no original description)"","protein_coding"
"Kfl00531_0060","kfl00531_0060_v1.1","Klebsormidium nitens","(at3g11670 : 597.0) Responsible for the final assembly of galactolipids in photosynthetic membranes.  Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q6dw74|dgdg1_lotja : 593.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (reliability: 1194.0) &  (original description: no original description)","protein_coding"
"Kfl00539_0080","kfl00539_0080_v1.1","Klebsormidium nitens","(at4g03020 : 319.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"Kfl00548_0020","kfl00548_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00628_0100","kfl00628_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00655_0020","kfl00655_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00692_0020","kfl00692_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00697_0050","kfl00697_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00697_0060","kfl00697_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00701_0030","kfl00701_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00791_0020","kfl00791_0020_v1.1","Klebsormidium nitens","(at1g32220 : 196.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: thylakoid, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 840 Blast hits to 838 proteins in 330 species: Archae - 22; Bacteria - 387; Metazoa - 19; Fungi - 146; Plants - 128; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"Kfl00802_0050","kfl00802_0050_v1.1","Klebsormidium nitens","(at3g51980 : 134.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 632 Blast hits to 632 proteins in 203 species: Archae - 0; Bacteria - 3; Metazoa - 254; Fungi - 162; Plants - 146; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00802_0080","kfl00802_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00895_0020","kfl00895_0020_v1.1","Klebsormidium nitens","(q40412|aba2_nicpl : 582.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g67030 : 558.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (reliability: 1116.0) &  (original description: no original description)","protein_coding"
"Kfl00962_0020","kfl00962_0020_v1.1","Klebsormidium nitens","(at1g01880 : 245.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: single-stranded DNA endonuclease family protein (TAIR:AT3G48900.2). & (q75li2|fen1b_orysa : 89.7) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"Kfl01056_0010","kfl01056_0010_v1.1","Klebsormidium nitens","(at5g38560 : 186.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 172.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"Kfl01057_0030","kfl01057_0030_v1.1","Klebsormidium nitens","(q01297|cata1_ricco : 422.0) Catalase isozyme 1 (EC 1.11.1.6) - Ricinus communis (Castor bean) & (at1g20630 : 417.0) Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.; catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g01160","No alias","Oryza sativa","heat shock protein DnaJ, putative, expressed","protein_coding"
"LOC_Os01g01380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g24440","No alias","Oryza sativa","glycine-rich protein, putative, expressed","protein_coding"
"LOC_Os01g25010","No alias","Oryza sativa","flavonol synthase/flavanone 3-hydroxylase, putative, expressed","protein_coding"
"LOC_Os01g37690","No alias","Oryza sativa","sodium/calcium exchanger protein, putative, expressed","protein_coding"
"LOC_Os01g41900","No alias","Oryza sativa","Myb transcription factor, putative, expressed","protein_coding"
"LOC_Os01g53330","No alias","Oryza sativa","anthocyanidin 5,3-O-glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os01g60830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g66350","No alias","Oryza sativa","DUF647 domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g02980","No alias","Oryza sativa","MATE domain containing protein, expressed","protein_coding"
"LOC_Os02g33580","No alias","Oryza sativa","digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os02g42310","No alias","Oryza sativa","OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed","protein_coding"
"LOC_Os02g49680","No alias","Oryza sativa","arsenate reductase, putative, expressed","protein_coding"
"LOC_Os02g52390","No alias","Oryza sativa","M16 domain containing zinc peptidase, putative, expressed","protein_coding"
"LOC_Os02g56510","No alias","Oryza sativa","phosphate transporter 1, putative, expressed","protein_coding"
"LOC_Os03g05310","No alias","Oryza sativa","pheophorbide a oxygenase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g11734","No alias","Oryza sativa","MATE efflux protein, putative, expressed","protein_coding"
"LOC_Os03g20700","No alias","Oryza sativa","magnesium-chelatase, putative, expressed","protein_coding"
"LOC_Os03g24950","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g31230","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os03g31690","No alias","Oryza sativa","GCN5-related N-acetyltransferase, putative, expressed","protein_coding"
"LOC_Os03g53300","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g55100","No alias","Oryza sativa","cyclic nucleotide-gated ion channel 2, putative, expressed","protein_coding"
"LOC_Os03g56310","No alias","Oryza sativa","5-nucleotidase domain-containing protein, putative, expressed","protein_coding"
"LOC_Os03g58230","No alias","Oryza sativa","plant-specific domain TIGR01615 family protein, expressed","protein_coding"
"LOC_Os04g19960","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g33080","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os04g37580","No alias","Oryza sativa","cation transport regulator-like protein 1, putative, expressed","protein_coding"
"LOC_Os04g38410","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding"
"LOC_Os04g48750","No alias","Oryza sativa","3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed","protein_coding"
"LOC_Os04g50100","No alias","Oryza sativa","RING-H2 finger protein ATL5G, putative, expressed","protein_coding"
"LOC_Os04g51320","No alias","Oryza sativa","transcription factor TF2, putative, expressed","protein_coding"
"LOC_Os04g53180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g55180","No alias","Oryza sativa","hydrolase, alpha/beta fold family domain containing protein, expressed","protein_coding"
"LOC_Os04g56240","No alias","Oryza sativa","lipase, putative, expressed","protein_coding"
"LOC_Os04g57020","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g58200","No alias","Oryza sativa","protochlorophyllide reductase A, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os05g02060","No alias","Oryza sativa","mitochondrial import inner membrane translocase subunit Tim17, putative, expressed","protein_coding"
"LOC_Os05g07870","No alias","Oryza sativa","triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os05g18840","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g25840","No alias","Oryza sativa"," ELMO/CED-12 family protein, putative, expressed","protein_coding"
"LOC_Os05g26820","No alias","Oryza sativa","CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os05g31040","No alias","Oryza sativa","cytokinin dehydrogenase precursor, putative, expressed","protein_coding"
"LOC_Os05g45350","No alias","Oryza sativa","dnaJ domain containing protein, expressed","protein_coding"
"LOC_Os05g50550","No alias","Oryza sativa","polyprenyl synthetase, putative, expressed","protein_coding"
"LOC_Os05g50920","No alias","Oryza sativa","transmembrane amino acid transporter protein, putative, expressed","protein_coding"
"LOC_Os06g04210","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g16420","No alias","Oryza sativa","amino acid transporter, putative, expressed","protein_coding"
"LOC_Os06g21380","No alias","Oryza sativa","OsCttP3 - Putative C-terminal processing peptidase homologue, expressed","protein_coding"
"LOC_Os06g29844","No alias","Oryza sativa","MATE efflux family protein, putative, expressed","protein_coding"
"LOC_Os06g39690","No alias","Oryza sativa","SOUL heme-binding protein, putative, expressed","protein_coding"
"LOC_Os07g01250","No alias","Oryza sativa","tobamovirus multiplication protein, putative, expressed","protein_coding"
"LOC_Os07g01660","No alias","Oryza sativa","dirigent, putative, expressed","protein_coding"
"LOC_Os07g08970","No alias","Oryza sativa","uncharacterized protein ycf45, putative, expressed","protein_coding"
"LOC_Os07g34850","No alias","Oryza sativa","aspartic proteinase nepenthesin, putative, expressed","protein_coding"
"LOC_Os07g36080","No alias","Oryza sativa","oxygen evolving enhancer protein 3 domain containing protein, expressed","protein_coding"
"LOC_Os07g37550","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding"
"LOC_Os07g42200","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g43330","No alias","Oryza sativa","heat shock protein DnaJ, putative, expressed","protein_coding"
"LOC_Os07g48410","No alias","Oryza sativa","RNA-binding zinc finger protein, putative, expressed","protein_coding"
"LOC_Os08g03310","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os08g30020","No alias","Oryza sativa","membrane protein, putative, expressed","protein_coding"
"LOC_Os08g32920","No alias","Oryza sativa","dynamin-2B, putative, expressed","protein_coding"
"LOC_Os09g07660","No alias","Oryza sativa"," ELMO/CED-12 family protein, putative, expressed","protein_coding"
"LOC_Os09g26670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g30340","No alias","Oryza sativa","photosystem I reaction center subunit, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os09g35880","No alias","Oryza sativa","B-box zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os09g39560","No alias","Oryza sativa","genetic modifier, putative, expressed","protein_coding"
"LOC_Os10g10180","No alias","Oryza sativa","methyltransferase domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g14870","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding"
"LOC_Os10g26670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g28050","No alias","Oryza sativa","chitinase 2, putative, expressed","protein_coding"
"LOC_Os10g28360","No alias","Oryza sativa","1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed","protein_coding"
"LOC_Os10g38940","No alias","Oryza sativa","fatty acid hydroxylase, putative, expressed","protein_coding"
"LOC_Os10g40830","No alias","Oryza sativa","metalloendoproteinase 1 precursor, putative, expressed","protein_coding"
"LOC_Os10g41100","No alias","Oryza sativa","CCT motif family protein, expressed","protein_coding"
"LOC_Os11g02610","No alias","Oryza sativa","BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed","protein_coding"
"LOC_Os11g04030","No alias","Oryza sativa","major facilitator superfamily antiporter, putative, expressed","protein_coding"
"LOC_Os11g34870","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g47460","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os12g01530","No alias","Oryza sativa","ferritin-1, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g03070","No alias","Oryza sativa","FHA domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g05050","No alias","Oryza sativa","stem-specific protein TSJT1, putative, expressed","protein_coding"
"LOC_Os12g07190","No alias","Oryza sativa","CBS domain-containing protein, putative, expressed","protein_coding"
"LOC_Os12g12580","No alias","Oryza sativa","NADP-dependent oxidoreductase, putative, expressed","protein_coding"
"LOC_Os12g13940","No alias","Oryza sativa","DNA-binding storekeeper protein-related, putative, expressed","protein_coding"
"LOC_Os12g33080","No alias","Oryza sativa","2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g37970","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"MA_10077253g0010","No alias","Picea abies","(at3g24430 : 104.0) encodes a MRP-like protein with a nucleotide-binding domain.; HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101); FUNCTIONS IN: ATP binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376), Protein of unknown function DUF59 (InterPro:IPR002744), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 16372 Blast hits to 16340 proteins in 2775 species: Archae - 600; Bacteria - 10162; Metazoa - 436; Fungi - 428; Plants - 202; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"MA_10426641g0010","No alias","Picea abies","(at4g25080 : 319.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"MA_10426793g0010","No alias","Picea abies","(at1g52870 : 416.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G03410.2); Has 1371 Blast hits to 1369 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 561; Fungi - 316; Plants - 329; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"MA_10427295g0010","No alias","Picea abies","(at5g22640 : 436.0) EMB1211 is a MORN (multiple membrane  occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.; embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"MA_10427595g0010","No alias","Picea abies","(at1g35420 : 284.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23600.1). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"MA_10428152g0010","No alias","Picea abies","(at2g44830 : 211.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink). & (p15792|kpk1_phavu : 211.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"MA_10428389g0010","No alias","Picea abies","(at5g01920 : 532.0) Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2  and CP43 proteins, and Thr-4 in PsbH  protein of photosystem II. Phosphorylation of Thr-4 in  the wild type required both light and prior  phosphorylation at Thr-2.; STN8; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: photosystem II stabilization; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: STN7 (Stt7 homolog STN7); kinase/ protein kinase (TAIR:AT1G68830.1); Has 33057 Blast hits to 33030 proteins in 1682 species: Archae - 26; Bacteria - 4053; Metazoa - 14243; Fungi - 4538; Plants - 3212; Viruses - 96; Other Eukaryotes - 6889 (source: NCBI BLink). & (q84v18|stt7_chlre : 229.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"MA_10430244g0010","No alias","Picea abies","(at1g67440 : 231.0) embryo defective 1688 (emb1688); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), EngC GTPase (InterPro:IPR010914), GTPase EngC (InterPro:IPR004881); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1); Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18; Bacteria - 4575; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 734 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"MA_10431343g0010","No alias","Picea abies","(at1g27510 : 282.0) FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT4G33630.2); Has 287 Blast hits to 280 proteins in 95 species: Archae - 0; Bacteria - 15; Metazoa - 66; Fungi - 43; Plants - 121; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"MA_10431763g0010","No alias","Picea abies","(at2g31170 : 580.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (reliability: 1160.0) &  (original description: no original description)","protein_coding"
"MA_10432566g0010","No alias","Picea abies","(at2g21710 : 93.2) embryo defective 2219 (EMB2219); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"MA_10432708g0010","No alias","Picea abies","(at3g51895 : 730.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02920|no70_soybn : 319.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 1460.0) &  (original description: no original description)","protein_coding"
"MA_10432911g0010","No alias","Picea abies","(at1g54520 : 90.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"MA_10433440g0030","No alias","Picea abies","(at1g31830 : 353.0) Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"MA_10433575g0010","No alias","Picea abies","(at1g74730 : 174.0) Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"MA_10433694g0010","No alias","Picea abies","(at1g23740 : 448.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 116.0) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 896.0) &  (original description: no original description)","protein_coding"
"MA_10433855g0010","No alias","Picea abies","(p93431|rca_orysa : 732.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (at2g39730 : 707.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 1414.0) &  (original description: no original description)","protein_coding"
"MA_10434753g0010","No alias","Picea abies","(at1g49380 : 613.0) cytochrome c biogenesis protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ResB-like (InterPro:IPR007816); Has 1416 Blast hits to 1414 proteins in 516 species: Archae - 0; Bacteria - 1016; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 1226.0) &  (original description: no original description)","protein_coding"
"MA_10434874g0010","No alias","Picea abies","(at5g42800 : 284.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51104|dfra_diaca : 273.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"MA_10434945g0010","No alias","Picea abies","(q9axe3|dcam_dauca : 384.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Daucus carota (Carrot) & (at3g02470 : 357.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"MA_10435583g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435618g0010","No alias","Picea abies","(q40412|aba2_nicpl : 629.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g67030 : 627.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (reliability: 1254.0) &  (original description: no original description)","protein_coding"
"MA_10435690g0010","No alias","Picea abies","(at4g25290 : 432.0) DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"MA_10436082g0010","No alias","Picea abies","(at4g25650 : 456.0) Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.; ACD1-like (ACD1-LIKE); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding, chlorophyllide a oxygenase [overall] activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Pheophorbide a oxygenase (InterPro:IPR013626); BEST Arabidopsis thaliana protein match is: Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain (TAIR:AT3G44880.1); Has 3440 Blast hits to 3433 proteins in 618 species: Archae - 4; Bacteria - 2370; Metazoa - 19; Fungi - 3; Plants - 426; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink). & (q9zwm5|cao_chlre : 100.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Chlamydomonas reinhardtii & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"MA_10436188g0010","No alias","Picea abies","(q53ni2|nadk2_orysa : 721.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 719.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 1438.0) &  (original description: no original description)","protein_coding"
"MA_10436249g0010","No alias","Picea abies","(at5g22620 : 516.0) phosphoglycerate/bisphosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G50520.1). & (reliability: 1032.0) &  (original description: no original description)","protein_coding"
"MA_10436278g0010","No alias","Picea abies","(at3g01060 : 554.0) unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"MA_10436657g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10436969g0010","No alias","Picea abies","(at3g02060 : 268.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"MA_10437027g0010","No alias","Picea abies","(at5g64840 : 749.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1498.0) &  (original description: no original description)","protein_coding"
"MA_10437148g0010","No alias","Picea abies","(p30567|cata2_goshi : 931.0) Catalase isozyme 2 (EC 1.11.1.6) - Gossypium hirsutum (Upland cotton) & (at4g35090 : 907.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves.  mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2  sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene.  Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1814.0) &  (original description: no original description)","protein_coding"
"MA_10437242g0030","No alias","Picea abies","(q43082|hem3_pea : 487.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 484.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (reliability: 968.0) &  (original description: no original description)","protein_coding"
"MA_10437262g0010","No alias","Picea abies","(at4g00370 : 182.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"MA_104409g0010","No alias","Picea abies","(p14766|f16p2_spiol : 619.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) & (at1g43670 : 609.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"MA_106219g0010","No alias","Picea abies","(at4g01050 : 196.0) hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required  for anchoring the FNR flavoenzyme to the thylakoid membranes  and sustaining high efficiency photosynthetic linear electron flow.; thylakoid rhodanese-like (TROL); FUNCTIONS IN: protein binding; INVOLVED IN: defense response to bacterium, photosynthetic electron transport in photosystem II; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G25480.1); Has 6015 Blast hits to 4196 proteins in 851 species: Archae - 23; Bacteria - 2268; Metazoa - 876; Fungi - 517; Plants - 614; Viruses - 167; Other Eukaryotes - 1550 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"MA_108278g0010","No alias","Picea abies","(at5g13630 : 2195.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4390.0) &  (original description: no original description)","protein_coding"
"MA_108616g0010","No alias","Picea abies","(at1g79550 : 143.0) Encodes cytosolic phosphoglycerate kinase (PGK).; phosphoglycerate kinase (PGK); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: cytosol, apoplast, plasma membrane, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10844 Blast hits to 10818 proteins in 3011 species: Archae - 254; Bacteria - 5218; Metazoa - 451; Fungi - 193; Plants - 517; Viruses - 0; Other Eukaryotes - 4211 (source: NCBI BLink). & (p12783|pgky_wheat : 143.0) Phosphoglycerate kinase, cytosolic (EC 2.7.2.3) - Triticum aestivum (Wheat) & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"MA_129930g0010","No alias","Picea abies","(p46256|alf1_pea : 550.0) Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 (EC 4.1.2.13) - Pisum sativum (Garden pea) & (at2g36460 : 538.0) Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"MA_138810g0010","No alias","Picea abies","(at5g13650 : 642.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (reliability: 1284.0) &  (original description: no original description)","protein_coding"
"MA_139754g0010","No alias","Picea abies","(at3g57520 : 805.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q93xk2|stsyn_pea : 392.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 1610.0) &  (original description: no original description)","protein_coding"
"MA_1640g0010","No alias","Picea abies","(at5g02160 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"MA_17658g0010","No alias","Picea abies","(at1g34000 : 127.0) Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner.  Ohp2 is associated with PSI under low- or high-light conditions.; one-helix protein 2 (OHP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 171 Blast hits to 159 proteins in 56 species: Archae - 0; Bacteria - 5; Metazoa - 24; Fungi - 6; Plants - 64; Viruses - 16; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"MA_18142g0010","No alias","Picea abies","(at2g13360 : 602.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (p84187|sgat_maize : 100.0) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) - Zea mays (Maize) & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"MA_181890g0010","No alias","Picea abies","(at3g43790 : 130.0) zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"MA_184421g0020","No alias","Picea abies","(at5g28500 : 247.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"MA_185611g0010","No alias","Picea abies","(p23225|gltb_maize : 1120.0) Ferredoxin-dependent glutamate synthase, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT) - Zea mays (Maize) & (at5g04140 : 1119.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (reliability: 2238.0) &  (original description: no original description)","protein_coding"
"MA_187850g0010","No alias","Picea abies","(at4g30825 : 404.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"MA_20909g0010","No alias","Picea abies","(p09342|ilv1_tobac : 877.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 875.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr.  The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (reliability: 1750.0) &  (original description: no original description)","protein_coding"
"MA_210555g0010","No alias","Picea abies","(p26302|kppr_wheat : 551.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 542.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (reliability: 1084.0) &  (original description: no original description)","protein_coding"
"MA_21385g0010","No alias","Picea abies","(at1g16720 : 349.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA.  Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits.  The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 698.0) &  (original description: no original description)","protein_coding"
"MA_22360g0010","No alias","Picea abies","(at2g24370 : 386.0) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT4G31230.1); Has 115907 Blast hits to 112870 proteins in 4808 species: Archae - 117; Bacteria - 15040; Metazoa - 41733; Fungi - 9339; Plants - 32152; Viruses - 245; Other Eukaryotes - 17281 (source: NCBI BLink). & (q8lkz1|nork_pea : 159.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"MA_233997g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_2453g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_33248g0010","No alias","Picea abies","(at5g11880 : 299.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT3G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"MA_364631g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_383044g0010","No alias","Picea abies","(q42910|ppdk_mescr : 504.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 491.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 982.0) &  (original description: no original description)","protein_coding"
"MA_38g0010","No alias","Picea abies","(at5g65670 : 256.0) auxin (indole-3-acetic acid) induced gene; indole-3-acetic acid inducible 9 (IAA9); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2120 Blast hits to 2118 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 3; Plants - 2115; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p0c132|iaa30_orysa : 242.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"MA_41114g0010","No alias","Picea abies","(at3g54050 : 503.0) Encodes HCEF1 (High Cyclic Electron Flow 1).  Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (q07204|f16p1_brana : 501.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"MA_4340g0010","No alias","Picea abies","(at1g17220 : 598.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 595.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"MA_48898g0010","No alias","Picea abies","(at1g78370 : 218.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink). & (q03666|gstx4_tobac : 205.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"MA_491265g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_584406g0010","No alias","Picea abies","(q42910|ppdk_mescr : 726.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 687.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1374.0) &  (original description: no original description)","protein_coding"
"MA_63231g0010","No alias","Picea abies","(p19866|g3pa_spiol : 566.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Spinacia oleracea (Spinach) & (at1g12900 : 553.0) glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1). & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"MA_64083g0010","No alias","Picea abies","(at1g11290 : 632.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1264.0) &  (original description: no original description)","protein_coding"
"MA_6712g0010","No alias","Picea abies","(q41142|plda1_ricco : 949.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at3g15730 : 913.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements.  PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 1826.0) &  (original description: no original description)","protein_coding"
"MA_6771199g0010","No alias","Picea abies","(at1g08550 : 165.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"MA_69727g0010","No alias","Picea abies","(p12859|g3pb_pea : 619.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 596.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (reliability: 1192.0) &  (original description: no original description)","protein_coding"
"MA_71865g0010","No alias","Picea abies","(at5g02860 : 701.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 248.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1402.0) &  (original description: no original description)","protein_coding"
"MA_7732g0010","No alias","Picea abies","(o49939|tlp40_spiol : 582.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (at3g01480 : 577.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"MA_802289g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_86628g0010","No alias","Picea abies","(at1g11290 : 652.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"MA_87479g0010","No alias","Picea abies","(at5g23060 : 303.0) Encodes a  chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+.; calcium sensing receptor (CaS); INVOLVED IN: regulation of stomatal closure, cellular response to calcium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT3G59780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"MA_87937g0010","No alias","Picea abies","(p46488|mdhg_cucsa : 565.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at5g09660 : 549.0) encodes a microbody NAD-dependent malate dehydrogenase  encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 2 (PMDH2); FUNCTIONS IN: malate dehydrogenase activity; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome, microbody; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1098.0) &  (original description: no original description)","protein_coding"
"MA_889802g0010","No alias","Picea abies","(at1g48520 : 242.0) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).; GLU-ADT subunit B (GATB); FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor, ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site (InterPro:IPR017958), Glutamyl-tRNA(Gln) amidotransferase, B subunit (InterPro:IPR004413), Aspartyl/glutamyl-tRNA amidotransferase subunit B-related (InterPro:IPR003789), Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E (InterPro:IPR017959), Asn/Gln amidotransferase (InterPro:IPR018027), Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal (InterPro:IPR006075); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 484.0) &  (original description: no original description)","protein_coding"
"MA_91782g0010","No alias","Picea abies","(q41249|pora_cucsa : 546.0) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Cucumis sativus (Cucumber) & (at5g54190 : 525.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"MA_9199701g0010","No alias","Picea abies","(p52783|glna_pinsy : 594.0) Glutamine synthetase cytosolic isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS1) - Pinus sylvestris (Scots pine) & (at1g66200 : 514.0) encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium; glutamine synthase clone F11 (GSR2); CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1). & (reliability: 1028.0) &  (original description: no original description)","protein_coding"
"MA_9251669g0020","No alias","Picea abies","(q41062|seca_pea : 165.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (at4g01800 : 160.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"MA_926365g0010","No alias","Picea abies","(at5g54180 : 116.0) plastid transcriptionally active 15 (PTAC15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G14605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"MA_92792g0010","No alias","Picea abies","(p52579|ifrh_tobac : 360.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at4g39230 : 357.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"MA_937923g0010","No alias","Picea abies","(at1g16720 : 365.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA.  Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits.  The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"MA_93993g0010","No alias","Picea abies","(at1g17220 : 212.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 197.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"MA_94546g0010","No alias","Picea abies","(at1g11530 : 97.1) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"MA_95157g0010","No alias","Picea abies","(at5g09820 : 211.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q6k439|pap2_orysa : 88.6) Probable plastid-lipid-associated protein 2, chloroplast precursor (Fibrillin-like protein 2) - Oryza sativa (Rice) & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"MA_962052g0010","No alias","Picea abies","(at2g41250 : 337.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"MA_98268g0010","No alias","Picea abies","(at1g78380 : 228.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (q03666|gstx4_tobac : 216.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"MA_99688g0010","No alias","Picea abies","(at3g09580 : 405.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"Mp1g00080.1","No alias","Marchantia polymorpha","uroporphyrinogen III decarboxylase","protein_coding"
"Mp1g02560.1","No alias","Marchantia polymorpha","chaperone component ClpC of chloroplast Clp-type protease complex","protein_coding"
"Mp1g05730.1","No alias","Marchantia polymorpha","component psRPL9 of large ribosomal subunit proteome","protein_coding"
"Mp1g06100.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana (sp|q8vyd6|pp374_arath : 398.0)","protein_coding"
"Mp1g07170.1","No alias","Marchantia polymorpha","component PetM/VII of cytochrome b6/f complex","protein_coding"
"Mp1g09290.1","No alias","Marchantia polymorpha","Peroxidase 29 OS=Arabidopsis thaliana (sp|q9lsp0|per29_arath : 232.0)","protein_coding"
"Mp1g11340.1","No alias","Marchantia polymorpha","PEP carboxylase","protein_coding"
"Mp1g12210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g12520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g12820.1","No alias","Marchantia polymorpha","photosynthetic acclimation APE acclimation factor","protein_coding"
"Mp1g15530.1","No alias","Marchantia polymorpha","ADP-glucose pyrophosphorylase","protein_coding"
"Mp1g15860.1","No alias","Marchantia polymorpha","lipase (LIP)","protein_coding"
"Mp1g17030.1","No alias","Marchantia polymorpha","SEP3 LHC-related protein","protein_coding"
"Mp1g17540.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g22860.1","No alias","Marchantia polymorpha","lysine N-methyltransferase involved in RuBisCo regulation","protein_coding"
"Mp1g23480.1","No alias","Marchantia polymorpha","UDP-D-glucose 4-epimerase","protein_coding"
"Mp1g26440.1","No alias","Marchantia polymorpha","subfamily ABCB transporter","protein_coding"
"Mp1g29620.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp2g00670.1","No alias","Marchantia polymorpha","zeaxanthin epoxidase. zeaxanthin epoxidase (ZEP). zeaxanthin epoxidase (ABA1)","protein_coding"
"Mp2g01030.1","No alias","Marchantia polymorpha","chorismate mutase","protein_coding"
"Mp2g07000.1","No alias","Marchantia polymorpha","protein kinase (ABC1)","protein_coding"
"Mp2g07580.1","No alias","Marchantia polymorpha","hydroxypyruvate reductase","protein_coding"
"Mp2g07880.1","No alias","Marchantia polymorpha","Rieske iron-sulfur component PetC of cytochrome b6/f complex","protein_coding"
"Mp2g08350.1","No alias","Marchantia polymorpha","chaperone (Hsp70)","protein_coding"
"Mp2g09760.1","No alias","Marchantia polymorpha","component cpSRP43 of thylakoid membrane SRP insertion system","protein_coding"
"Mp2g09820.1","No alias","Marchantia polymorpha","L-asparaginase","protein_coding"
"Mp2g15630.1","No alias","Marchantia polymorpha","xylulose-1,5-bisphosphate phosphatase (CbbY)","protein_coding"
"Mp2g21320.1","No alias","Marchantia polymorpha","Cell division protein FtsZ homolog 2-2, chloroplastic OS=Arabidopsis thaliana (sp|q9lxj0|ftz22_arath : 317.0)","protein_coding"
"Mp2g22790.1","No alias","Marchantia polymorpha","phosphoglycerate mutase","protein_coding"
"Mp2g26380.1","No alias","Marchantia polymorpha","gamma-tocopherol methyltransferase (VTE4/TMT)","protein_coding"
"Mp3g05790.1","No alias","Marchantia polymorpha","subunit delta of peripheral CF1 subcomplex of ATP synthase complex","protein_coding"
"Mp3g12160.1","No alias","Marchantia polymorpha","Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana (sp|q94a65|str14_arath : 191.0)","protein_coding"
"Mp3g20070.1","No alias","Marchantia polymorpha","class-II histone deacetylase","protein_coding"
"Mp3g22950.1","No alias","Marchantia polymorpha","ubiquitin-fold protein (UBQ)","protein_coding"
"Mp3g22970.1","No alias","Marchantia polymorpha","Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana (sp|q9fjr0|rent1_arath : 214.0)","protein_coding"
"Mp3g25350.1","No alias","Marchantia polymorpha","starch synthase (SSI)","protein_coding"
"Mp4g00300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g02900.1","No alias","Marchantia polymorpha","Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 230.7) & Cyanate hydratase OS=Physcomitrella patens subsp. patens (sp|a9tnd9|cyns_phypa : 223.0)","protein_coding"
"Mp4g04600.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g05580.1","No alias","Marchantia polymorpha","delta7-sterol C-5 desaturase","protein_coding"
"Mp4g07300.1","No alias","Marchantia polymorpha","component mtRPL10|psRPL10 of large ribosomal subunit proteome. component psRPL10|mtRPL10 of large ribosomal subunit proteome","protein_coding"
"Mp4g07530.1","No alias","Marchantia polymorpha","LCNP non-photochemical quenching regulator lipocalin","protein_coding"
"Mp4g14500.1","No alias","Marchantia polymorpha","Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana (sp|o49629|pap2_arath : 287.0)","protein_coding"
"Mp4g14650.1","No alias","Marchantia polymorpha","anion channel (QUAC/ALMT)","protein_coding"
"Mp4g20130.1","No alias","Marchantia polymorpha","geranylgeranyl reductase (ChlP)","protein_coding"
"Mp4g21140.1","No alias","Marchantia polymorpha","chlorophyllide a oxygenase","protein_coding"
"Mp5g00480.1","No alias","Marchantia polymorpha","glutaredoxin","protein_coding"
"Mp5g00500.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g03060.1","No alias","Marchantia polymorpha","catalytic component CRD1 of Mg-protoporphyrin IX monomethylester cyclase complex","protein_coding"
"Mp5g04160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g08000.1","No alias","Marchantia polymorpha","scaffolding component LCAA of Mg-protoporphyrin IX monomethylester cyclase complex","protein_coding"
"Mp5g09540.1","No alias","Marchantia polymorpha","Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana (sp|f4ihj0|sfh8_arath : 95.1)","protein_coding"
"Mp5g13370.1","No alias","Marchantia polymorpha","CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana (sp|q9c5d0|cbsx2_arath : 227.0)","protein_coding"
"Mp5g19450.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g20670.1","No alias","Marchantia polymorpha","ARC3 plastid division FtsZ assembly factor","protein_coding"
"Mp5g20690.1","No alias","Marchantia polymorpha","divinyl chlorophyllide-a 8-vinyl-reductase","protein_coding"
"Mp5g21680.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)(50.1.12 : 876.3) & Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum (sp|q43190|lox14_soltu : 710.0)","protein_coding"
"Mp5g22220.1","No alias","Marchantia polymorpha","Y-type thioredoxin","protein_coding"
"Mp5g22590.1","No alias","Marchantia polymorpha","Cytochrome P450 716B1 OS=Picea sitchensis (sp|q50ek1|c16b1_picsi : 266.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 133.9)","protein_coding"
"Mp5g22780.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g23950.1","No alias","Marchantia polymorpha","component cpTatC of thylakoid membrane Tat translocation system","protein_coding"
"Mp6g03200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g04740.1","No alias","Marchantia polymorpha","cytosolic phosphoglucose isomerase","protein_coding"
"Mp6g09920.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 174.3) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 122.0)","protein_coding"
"Mp6g12170.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g15090.1","No alias","Marchantia polymorpha","Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar (sp|c3veq4|ccd1_onchc : 260.0)","protein_coding"
"Mp6g16200.1","No alias","Marchantia polymorpha","PTP phosphatase (LMW)","protein_coding"
"Mp6g18510.1","No alias","Marchantia polymorpha","psbJ/psbN-translation activator (LPE1)","protein_coding"
"Mp6g19830.1","No alias","Marchantia polymorpha","chlorophyll synthase (ChlG)","protein_coding"
"Mp6g20800.1","No alias","Marchantia polymorpha","Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana (sp|q8lca1|cut1b_arath : 112.0)","protein_coding"
"Mp7g05890.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp7g06720.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp7g06730.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp7g06750.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp7g06770.1","No alias","Marchantia polymorpha","component LHCb1/2/3 of LHC-II complex","protein_coding"
"Mp7g08280.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g11670.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g12660.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g12990.1","No alias","Marchantia polymorpha","carotenoid cleavage dioxygenase (CCD1)","protein_coding"
"Mp7g17100.1","No alias","Marchantia polymorpha","peptidase (DeSI). peptidase (PPPDE)","protein_coding"
"Mp7g18420.1","No alias","Marchantia polymorpha","subfamily ABCA transporter","protein_coding"
"Mp7g18500.1","No alias","Marchantia polymorpha","fatty acid transporter (ABCA). subfamily ABCA transporter","protein_coding"
"Mp8g00090.1","No alias","Marchantia polymorpha","Heptahelical transmembrane protein 4 OS=Arabidopsis thaliana (sp|q9szg0|hhp4_arath : 389.0)","protein_coding"
"Mp8g01220.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g04680.1","No alias","Marchantia polymorpha","protein kinase (ABC1)","protein_coding"
"Mp8g05860.1","No alias","Marchantia polymorpha","component psRPL17 of large ribosomal subunit proteome","protein_coding"
"Mp8g06050.1","No alias","Marchantia polymorpha","protein kinase (ABC1)","protein_coding"
"Mp8g06810.1","No alias","Marchantia polymorpha","HCF244 protein involved in PS-II assembly","protein_coding"
"Mp8g09280.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g10040.1","No alias","Marchantia polymorpha","PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana (sp|q9s720|ppd3_arath : 172.0)","protein_coding"
"Mp8g10280.1","No alias","Marchantia polymorpha","component CHL-H of magnesium-chelatase complex. ABAR chloroplast envelope-localized abscisic acid receptor","protein_coding"
"Mp8g11030.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 1028.6) & Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana (sp|q9fna9|pdat1_arath : 872.0)","protein_coding"
"Mp8g12090.1","No alias","Marchantia polymorpha","glycerate:glycolate transporter. glycerate:glycolate transporter (PLGG1)","protein_coding"
"Mp8g13380.1","No alias","Marchantia polymorpha","endo-beta-1,4-mannanase","protein_coding"
"Mp8g14710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g17840.1","No alias","Marchantia polymorpha","light-dependent protochlorophyllide oxidoreductase","protein_coding"
"Mp8g18100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g18110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g18400.1","No alias","Marchantia polymorpha","phosphopentose isomerase. ribose 5-phosphate isomerase","protein_coding"
"Potri.006G051100","No alias","Populus trichocarpa","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Potri.007G078966","No alias","Populus trichocarpa","violaxanthin de-epoxidase-related","protein_coding"
"Pp1s100_104V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s109_211V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s12_317V6","No alias","Physcomitrella patens","carotenoid cleavage dioxygenase 1","protein_coding"
"Pp1s139_37V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s161_34V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding"
"Pp1s161_69V6","No alias","Physcomitrella patens","MED24.18; auxin-regulated protein [Arabidopsis thaliana]","protein_coding"
"Pp1s168_73V6","No alias","Physcomitrella patens","F16J14.21; late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s182_81V6","No alias","Physcomitrella patens","chlorophyll a b binding","protein_coding"
"Pp1s184_61V6","No alias","Physcomitrella patens","F25P22.24; Ssu72-like family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s194_15V6","No alias","Physcomitrella patens","18.2 kDa class I heat shock protein (HSP 18.2) [Arabidopsis thaliana]","protein_coding"
"Pp1s1_625V6","No alias","Physcomitrella patens","chlorophyll a b binding","protein_coding"
"Pp1s206_12V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s210_91V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s215_12V6","No alias","Physcomitrella patens","unknown [Glycine max]","protein_coding"
"Pp1s224_107V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s225_73V6","No alias","Physcomitrella patens","chlorophyllide a oxygenase","protein_coding"
"Pp1s22_137V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s22_166V6","No alias","Physcomitrella patens","F20B24.22; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s232_64V6","No alias","Physcomitrella patens","LOC500458; similar to Cylicin-2 (Cylicin II) (Multiple-band polypeptide II) [Rattus norvegicus]","protein_coding"
"Pp1s239_18V6","No alias","Physcomitrella patens","magnesium-protoporphyrin ix monomethyl ester","protein_coding"
"Pp1s247_8V6","No alias","Physcomitrella patens","Receptor-like protein kinase precursor [Ipomoea nil]","protein_coding"
"Pp1s25_110V6","No alias","Physcomitrella patens","chloroplast protein cp12","protein_coding"
"Pp1s26_285V6","No alias","Physcomitrella patens","alpha beta hydrolase fold protein","protein_coding"
"Pp1s27_97V6","No alias","Physcomitrella patens","light-harvesting complex ii protein lhcb2","protein_coding"
"Pp1s286_62V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s287_31V6","No alias","Physcomitrella patens","peptidoglycan-binding","protein_coding"
"Pp1s28_319V6","No alias","Physcomitrella patens","chloroplast light-harvesting complex ii protein","protein_coding"
"Pp1s312_12V6","No alias","Physcomitrella patens","class II RPD3 type histone deacetylase protein","protein_coding"
"Pp1s335_10V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s348_31V6","No alias","Physcomitrella patens","magnesium chelatase h subunit","protein_coding"
"Pp1s348_32V6","No alias","Physcomitrella patens","magnesium chelatase h subunit","protein_coding"
"Pp1s34_41V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s352_9V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s36_134V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s36_342V6","No alias","Physcomitrella patens","cation-chloride cotransporter family","protein_coding"
"Pp1s36_343V6","No alias","Physcomitrella patens","cation-chloride cotransporter family","protein_coding"
"Pp1s43_80V6","No alias","Physcomitrella patens","ascorbate peroxidase","protein_coding"
"Pp1s457_1V6","No alias","Physcomitrella patens","serine threonine protein kinase","protein_coding"
"Pp1s472_15V6","No alias","Physcomitrella patens","chlorophyll a b binding","protein_coding"
"Pp1s497_2V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s51_261V6","No alias","Physcomitrella patens","family protein","protein_coding"
"Pp1s523_12V6","No alias","Physcomitrella patens","spore coat protein","protein_coding"
"Pp1s53_66V6","No alias","Physcomitrella patens","Myosin IJ heavy chain [Dictyostelium discoideum]","protein_coding"
"Pp1s54_167V6","No alias","Physcomitrella patens","photosystem ii 10 kda polypeptide","protein_coding"
"Pp1s60_220V6","No alias","Physcomitrella patens","calmodulin binding","protein_coding"
"Pp1s61_95V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s64_135V6","No alias","Physcomitrella patens","isopentenyl transferase","protein_coding"
"Pp1s69_133V6","No alias","Physcomitrella patens","Putative protein At4g01050 [Arabidopsis thaliana]","protein_coding"
"Pp1s79_128V6","No alias","Physcomitrella patens","cathepsin b-like cysteine proteinase","protein_coding"
"Pp1s79_93V6","No alias","Physcomitrella patens","FCAALL.30; lil3 protein [Arabidopsis thaliana]","protein_coding"
"Pp1s84_242V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s87_141V6","No alias","Physcomitrella patens","phospholipase c","protein_coding"
"Pp1s8_129V6","No alias","Physcomitrella patens","No description available","protein_coding"
"PSME_00000778-RA","No alias","Pseudotsuga menziesii","(at3g10970 : 269.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G11570.2); Has 3249 Blast hits to 3249 proteins in 1169 species: Archae - 14; Bacteria - 2940; Metazoa - 3; Fungi - 1; Plants - 144; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"PSME_00000804-RA","No alias","Pseudotsuga menziesii","(at5g02160 : 108.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00001069-RA","No alias","Pseudotsuga menziesii","(at1g67440 : 129.0) embryo defective 1688 (emb1688); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), EngC GTPase (InterPro:IPR010914), GTPase EngC (InterPro:IPR004881); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1); Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18; Bacteria - 4575; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 734 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00001163-RA","No alias","Pseudotsuga menziesii","(o24301|sus2_pea : 984.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (at4g02280 : 974.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (reliability: 1948.0) &  (original description: no original description)","protein_coding"
"PSME_00001334-RA","No alias","Pseudotsuga menziesii","(at1g64060 : 808.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"PSME_00001337-RA","No alias","Pseudotsuga menziesii","(at4g04350 : 258.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00001495-RA","No alias","Pseudotsuga menziesii","(p46488|mdhg_cucsa : 509.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Cucumis sativus (Cucumber) & (at2g22780 : 495.0) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 1 (PMDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: chloroplast, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2 (TAIR:AT5G09660.1); Has 16991 Blast hits to 16989 proteins in 5457 species: Archae - 237; Bacteria - 11827; Metazoa - 1259; Fungi - 489; Plants - 758; Viruses - 0; Other Eukaryotes - 2421 (source: NCBI BLink). & (reliability: 990.0) &  (original description: no original description)","protein_coding"
"PSME_00001767-RA","No alias","Pseudotsuga menziesii","(at5g66750 : 797.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 436.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1594.0) &  (original description: no original description)","protein_coding"
"PSME_00002407-RA","No alias","Pseudotsuga menziesii","(at5g13710 : 145.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (q6zix2|smt1_orysa : 131.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00002409-RA","No alias","Pseudotsuga menziesii","(at5g42390 : 1155.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2310.0) &  (original description: no original description)","protein_coding"
"PSME_00003059-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00003116-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00003579-RA","No alias","Pseudotsuga menziesii","(at1g50300 : 201.0) TBP-associated factor 15 (TAF15); FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15B (TAIR:AT5G58470.2); Has 11021 Blast hits to 6677 proteins in 384 species: Archae - 8; Bacteria - 254; Metazoa - 5533; Fungi - 1360; Plants - 1875; Viruses - 14; Other Eukaryotes - 1977 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"PSME_00003906-RA","No alias","Pseudotsuga menziesii","(at1g80380 : 145.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00003959-RA","No alias","Pseudotsuga menziesii","(at1g02080 : 107.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00004227-RA","No alias","Pseudotsuga menziesii","(p23225|gltb_maize : 550.0) Ferredoxin-dependent glutamate synthase, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT) - Zea mays (Maize) & (at5g04140 : 540.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"PSME_00004499-RA","No alias","Pseudotsuga menziesii","(at1g09740 : 105.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"PSME_00004756-RA","No alias","Pseudotsuga menziesii","(at4g02070 : 195.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00005728-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 421.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"PSME_00005803-RA","No alias","Pseudotsuga menziesii","(at3g08940 : 324.0) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (q93wd2|cb29_chlre : 234.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00005875-RA","No alias","Pseudotsuga menziesii","(at4g27600 : 432.0) Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5.  Regulates photosynthetic gene expression.; GENES NECESSARY FOR THE  ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5); CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G19600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"PSME_00006184-RA","No alias","Pseudotsuga menziesii","(p93111|hem11_cucsa : 685.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 668.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (reliability: 1336.0) &  (original description: no original description)","protein_coding"
"PSME_00006296-RA","No alias","Pseudotsuga menziesii","(at5g45140 : 691.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (reliability: 1382.0) &  (original description: no original description)","protein_coding"
"PSME_00006297-RA","No alias","Pseudotsuga menziesii","(at5g45140 : 500.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (p60283|rpob_phypa : 113.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Physcomitrella patens (Moss) & (reliability: 1000.0) &  (original description: no original description)","protein_coding"
"PSME_00006807-RA","No alias","Pseudotsuga menziesii","(at3g56040 : 677.0) UDP-glucose pyrophosphorylase 3 (UGP3); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); Has 215 Blast hits to 211 proteins in 91 species: Archae - 0; Bacteria - 18; Metazoa - 12; Fungi - 60; Plants - 85; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 1354.0) &  (original description: no original description)","protein_coding"
"PSME_00007816-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 668.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 1336.0) &  (original description: no original description)","protein_coding"
"PSME_00007880-RA","No alias","Pseudotsuga menziesii","(p26302|kppr_wheat : 623.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 615.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (reliability: 1230.0) &  (original description: no original description)","protein_coding"
"PSME_00008432-RA","No alias","Pseudotsuga menziesii","(at5g06360 : 478.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 956.0) &  (original description: no original description)","protein_coding"
"PSME_00008602-RA","No alias","Pseudotsuga menziesii","(q43467|eftu1_soybn : 699.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Glycine max (Soybean) & (at4g20360 : 678.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1356.0) &  (original description: no original description)","protein_coding"
"PSME_00009474-RA","No alias","Pseudotsuga menziesii","(at5g01920 : 299.0) Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2  and CP43 proteins, and Thr-4 in PsbH  protein of photosystem II. Phosphorylation of Thr-4 in  the wild type required both light and prior  phosphorylation at Thr-2.; STN8; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: photosystem II stabilization; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: STN7 (Stt7 homolog STN7); kinase/ protein kinase (TAIR:AT1G68830.1); Has 33057 Blast hits to 33030 proteins in 1682 species: Archae - 26; Bacteria - 4053; Metazoa - 14243; Fungi - 4538; Plants - 3212; Viruses - 96; Other Eukaryotes - 6889 (source: NCBI BLink). & (q84v18|stt7_chlre : 152.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"PSME_00010091-RA","No alias","Pseudotsuga menziesii","(at2g39450 : 144.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00010420-RA","No alias","Pseudotsuga menziesii","(at1g19660 : 379.0) Wound-responsive family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to wounding, nucleotide-excision repair; EXPRESSED IN: ovule; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: bifunctional nuclease in basal defense response 1 (TAIR:AT1G75380.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00010558-RA","No alias","Pseudotsuga menziesii","(at2g01980 : 177.0) Encodes a plasma membrane-localized Na+/H+ antiporter SOS1.  Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance.  Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.; SALT OVERLY SENSITIVE 1 (SOS1); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Na+/H+ exchanger, isoforms 7/8, conserved region (InterPro:IPR018418); BEST Arabidopsis thaliana protein match is: Na+/H+ exchanger 8 (TAIR:AT1G14660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00010578-RA","No alias","Pseudotsuga menziesii","(at4g28080 : 1306.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 2612.0) &  (original description: no original description)","protein_coding"
"PSME_00010650-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010979-RA","No alias","Pseudotsuga menziesii","(at3g09580 : 453.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"PSME_00011008-RA","No alias","Pseudotsuga menziesii","(at5g48460 : 177.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00011060-RA","No alias","Pseudotsuga menziesii","(at1g23400 : 167.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00011679-RA","No alias","Pseudotsuga menziesii","(at5g54290 : 179.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00012405-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012536-RA","No alias","Pseudotsuga menziesii",""(p18492|gsa_horvu : 674.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Hordeum vulgare (Barley) & (at5g63570 : 653.0) Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.; ""glutamate-1-semialdehyde-2,1-aminomutase"" (GSA1); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity; INVOLVED IN: response to light stimulus, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde 2,1-aminomutase 2 (TAIR:AT3G48730.1); Has 34880 Blast hits to 34874 proteins in 2819 species: Archae - 734; Bacteria - 23560; Metazoa - 547; Fungi - 812; Plants - 385; Viruses - 2; Other Eukaryotes - 8840 (source: NCBI BLink). & (reliability: 1306.0) &  (original description: no original description)"","protein_coding"
"PSME_00013742-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 345.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00013765-RA","No alias","Pseudotsuga menziesii","(at3g48000 : 800.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (p17202|badh_spiol : 367.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1600.0) &  (original description: no original description)","protein_coding"
"PSME_00014258-RA","No alias","Pseudotsuga menziesii","(at3g47570 : 579.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 445.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"PSME_00014301-RA","No alias","Pseudotsuga menziesii","(q53ni2|nadk2_orysa : 791.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 786.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 1572.0) &  (original description: no original description)","protein_coding"
"PSME_00014536-RA","No alias","Pseudotsuga menziesii","(at4g33300 : 158.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"PSME_00014614-RA","No alias","Pseudotsuga menziesii","(p52783|glna_pinsy : 602.0) Glutamine synthetase cytosolic isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS1) - Pinus sylvestris (Scots pine) & (at5g16570 : 524.0) Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthetase 1;4 (GLN1;4); CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"PSME_00015604-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 315.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 177.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00015673-RA","No alias","Pseudotsuga menziesii","(at1g11310 : 477.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in  A. thaliana does not involve the signaling molecules ethylene,  jasmonic acid or salicylic acid, but requires a syntaxin,  glycosyl hydrolase and ABC transporter.; MILDEW RESISTANCE LOCUS O 2 (MLO2); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to fungus, incompatible interaction, cell death, response to fungus, negative regulation of defense response, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G61560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49873|mloh1_horvu : 430.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 954.0) &  (original description: no original description)","protein_coding"
"PSME_00016970-RA","No alias","Pseudotsuga menziesii","(at3g52820 : 533.0) purple acid phosphatase 22 (PAP22); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 21 (TAIR:AT3G52810.1); Has 2151 Blast hits to 2132 proteins in 447 species: Archae - 3; Bacteria - 778; Metazoa - 239; Fungi - 77; Plants - 761; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q09131|ppaf_soybn : 273.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1066.0) &  (original description: no original description)","protein_coding"
"PSME_00017330-RA","No alias","Pseudotsuga menziesii","(q42910|ppdk_mescr : 1442.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 1390.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2780.0) &  (original description: no original description)","protein_coding"
"PSME_00017359-RA","No alias","Pseudotsuga menziesii","(at1g28680 : 191.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G07080.1); Has 2577 Blast hits to 2568 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 64; Plants - 2509; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o24645|hcbt1_diaca : 127.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00018249-RA","No alias","Pseudotsuga menziesii","(o49954|gcsp_soltu : 1622.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at4g33010 : 1620.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3240.0) &  (original description: no original description)","protein_coding"
"PSME_00018464-RA","No alias","Pseudotsuga menziesii","(p17606|mdhp1_sorbi : 645.0) Malate dehydrogenase [NADP] 1, chloroplast precursor (EC 1.1.1.82) (NADP-MDH-1) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g58330 : 619.0) lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NADP-dependent, plants (InterPro:IPR011273), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G56720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00018821-RA","No alias","Pseudotsuga menziesii","(p13046|prr1_tobac : 142.0) Pathogenesis-related protein R major form precursor (Thaumatin-like protein E22) - Nicotiana tabacum (Common tobacco) & (at1g19320 : 136.0) Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1611 Blast hits to 1588 proteins in 180 species: Archae - 0; Bacteria - 48; Metazoa - 52; Fungi - 78; Plants - 1416; Viruses - 5; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00019142-RA","No alias","Pseudotsuga menziesii","(at1g08570 : 197.0) Encodes a member of the thioredoxin family protein.  Located in the chloroplast.  Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate   dehydrogenase.; atypical CYS  HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS  HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00020615-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 265.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 194.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00021354-RA","No alias","Pseudotsuga menziesii",""(at5g36110 : 431.0) member of CYP716A; ""cytochrome P450, family 716, subfamily A, polypeptide 1"" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 234.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 862.0) &  (original description: no original description)"","protein_coding"
"PSME_00021784-RA","No alias","Pseudotsuga menziesii","(at2g39510 : 265.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 4772 Blast hits to 4753 proteins in 819 species: Archae - 36; Bacteria - 2386; Metazoa - 4; Fungi - 0; Plants - 1228; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00022164-RA","No alias","Pseudotsuga menziesii","(o81919|calr_betvu : 213.0) Calreticulin precursor - Beta vulgaris (Sugar beet) & (at1g09210 : 211.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"PSME_00022169-RA","No alias","Pseudotsuga menziesii","(at1g25580 : 283.0) Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.; SUPPRESSOR OF GAMMA RADIATION 1 (SOG1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, response to gamma radiation, DNA damage checkpoint, regulation of meiosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 85 (TAIR:AT5G14490.1); Has 2166 Blast hits to 2160 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 5; Plants - 2134; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"PSME_00022410-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022412-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022885-RA","No alias","Pseudotsuga menziesii","(at5g10070 : 95.5) RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"PSME_00023055-RA","No alias","Pseudotsuga menziesii","(at1g52870 : 412.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G03410.2); Has 1371 Blast hits to 1369 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 561; Fungi - 316; Plants - 329; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 824.0) &  (original description: no original description)","protein_coding"
"PSME_00023602-RA","No alias","Pseudotsuga menziesii","(p14766|f16p2_spiol : 616.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) & (at1g43670 : 598.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"PSME_00023743-RA","No alias","Pseudotsuga menziesii","(p42056|vdac2_soltu : 213.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 196.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00024391-RA","No alias","Pseudotsuga menziesii","(at5g12860 : 766.0) dicarboxylate transporter 1 (DiT1); FUNCTIONS IN: oxoglutarate:malate antiporter activity; INVOLVED IN: N-terminal protein myristoylation, malate transport, response to nematode; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/sulphate symporter (InterPro:IPR001898); BEST Arabidopsis thaliana protein match is: dicarboxylate transport 2.1 (TAIR:AT5G64290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41364|sot1_spiol : 756.0) 2-oxoglutarate/malate translocator, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1532.0) &  (original description: no original description)","protein_coding"
"PSME_00024423-RA","No alias","Pseudotsuga menziesii","(at5g09820 : 214.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q6k439|pap2_orysa : 90.5) Probable plastid-lipid-associated protein 2, chloroplast precursor (Fibrillin-like protein 2) - Oryza sativa (Rice) & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"PSME_00025567-RA","No alias","Pseudotsuga menziesii","(at3g58060 : 321.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.2); Has 4333 Blast hits to 4329 proteins in 1671 species: Archae - 143; Bacteria - 3530; Metazoa - 46; Fungi - 247; Plants - 204; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"PSME_00025898-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 2125.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4250.0) &  (original description: no original description)","protein_coding"
"PSME_00026033-RA","No alias","Pseudotsuga menziesii","(p12859|g3pb_pea : 623.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) - Pisum sativum (Garden pea) & (at1g42970 : 610.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (reliability: 1220.0) &  (original description: no original description)","protein_coding"
"PSME_00026632-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00026803-RA","No alias","Pseudotsuga menziesii","(at3g51730 : 92.0) saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT5G01800.1); Has 951 Blast hits to 460 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 738; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"PSME_00026870-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00026922-RA","No alias","Pseudotsuga menziesii","(at3g03940 : 520.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"PSME_00027169-RA","No alias","Pseudotsuga menziesii","(at5g65140 : 148.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: response to cadmium ion, trehalose biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G10100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"PSME_00027400-RA","No alias","Pseudotsuga menziesii","(at2g39940 : 611.0) Encodes a protein containing Leu-rich repeats  and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 1222.0) &  (original description: no original description)","protein_coding"
"PSME_00027430-RA","No alias","Pseudotsuga menziesii","(at2g03200 : 374.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (q6yny7|asp1_orysa : 99.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"PSME_00027540-RA","No alias","Pseudotsuga menziesii","(o04408|ksa_pea : 627.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (at4g02780 : 619.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00027843-RA","No alias","Pseudotsuga menziesii","(at3g17970 : 339.0) Integral chloroplast outer membrane protein.; translocon at the outer membrane of chloroplasts 64-III (TOC64-III); FUNCTIONS IN: binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; LOCATED IN: integral to chloroplast outer membrane, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 32911 Blast hits to 27744 proteins in 2680 species: Archae - 530; Bacteria - 15888; Metazoa - 4120; Fungi - 2515; Plants - 2100; Viruses - 0; Other Eukaryotes - 7758 (source: NCBI BLink). & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"PSME_00028656-RA","No alias","Pseudotsuga menziesii","(at1g66920 : 211.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 157.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00029471-RA","No alias","Pseudotsuga menziesii","(at5g01020 : 555.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G05940.1); Has 117465 Blast hits to 116000 proteins in 4235 species: Archae - 97; Bacteria - 13843; Metazoa - 43298; Fungi - 9750; Plants - 33095; Viruses - 372; Other Eukaryotes - 17010 (source: NCBI BLink). & (q8l4h4|nork_medtr : 228.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"PSME_00029764-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 540.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"PSME_00030171-RA","No alias","Pseudotsuga menziesii","(at1g02520 : 617.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 381.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"PSME_00030176-RA","No alias","Pseudotsuga menziesii","(at1g02150 : 296.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"PSME_00030331-RA","No alias","Pseudotsuga menziesii","(at1g19715 : 88.2) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"PSME_00030438-RA","No alias","Pseudotsuga menziesii","(at2g16990 : 191.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00030515-RA","No alias","Pseudotsuga menziesii","(at1g67890 : 308.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00030644-RA","No alias","Pseudotsuga menziesii","(at1g54290 : 107.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 846 Blast hits to 843 proteins in 268 species: Archae - 14; Bacteria - 1; Metazoa - 362; Fungi - 162; Plants - 197; Viruses - 5; Other Eukaryotes - 105 (source: NCBI BLink). & (q9sqf4|sui1_braol : 105.0) Protein translation factor SUI1 homolog (Translation initiation factor nps45) - Brassica oleracea (Wild cabbage) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00030715-RA","No alias","Pseudotsuga menziesii","(at1g72660 : 316.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"PSME_00031602-RA","No alias","Pseudotsuga menziesii","(at1g67800 : 317.0) Copine (Calcium-dependent phospholipid-binding protein) family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2); Has 1565 Blast hits to 1560 proteins in 126 species: Archae - 0; Bacteria - 2; Metazoa - 893; Fungi - 2; Plants - 396; Viruses - 12; Other Eukaryotes - 260 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00032055-RA","No alias","Pseudotsuga menziesii","(p19866|g3pa_spiol : 603.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Spinacia oleracea (Spinach) & (at1g12900 : 587.0) glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"PSME_00032099-RA","No alias","Pseudotsuga menziesii","(p30567|cata2_goshi : 835.0) Catalase isozyme 2 (EC 1.11.1.6) - Gossypium hirsutum (Upland cotton) & (at4g35090 : 823.0) Encodes a peroxisomal catalase, highly expressed in bolts and leaves.  mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2  sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene.  Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).; catalase 2 (CAT2); FUNCTIONS IN: protein binding, catalase activity, cobalt ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, cytosolic ribosome, stromule, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1646.0) &  (original description: no original description)","protein_coding"
"PSME_00032462-RA","No alias","Pseudotsuga menziesii","(at2g27170 : 221.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00033057-RA","No alias","Pseudotsuga menziesii","(at1g27510 : 220.0) FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3506 (InterPro:IPR021894), UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3506) (TAIR:AT4G33630.2); Has 287 Blast hits to 280 proteins in 95 species: Archae - 0; Bacteria - 15; Metazoa - 66; Fungi - 43; Plants - 121; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00033291-RA","No alias","Pseudotsuga menziesii","(at2g30950 : 305.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (o82150|ftsh_tobac : 205.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"PSME_00033325-RA","No alias","Pseudotsuga menziesii","(at2g31890 : 333.0) Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance.; RAP; CONTAINS InterPro DOMAIN/s: RAP domain (InterPro:IPR013584); Has 766 Blast hits to 576 proteins in 113 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 18; Plants - 194; Viruses - 0; Other Eukaryotes - 390 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00033877-RA","No alias","Pseudotsuga menziesii","(at2g20570 : 259.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00035511-RA","No alias","Pseudotsuga menziesii","(q41046|phy_pinsy : 1735.0) Phytochrome - Pinus sylvestris (Scots pine) & (at2g18790 : 1340.0) Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.; phytochrome B (PHYB); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome D (TAIR:AT4G16250.1); Has 25059 Blast hits to 24774 proteins in 3701 species: Archae - 266; Bacteria - 19279; Metazoa - 9; Fungi - 493; Plants - 3930; Viruses - 5; Other Eukaryotes - 1077 (source: NCBI BLink). & (reliability: 2680.0) &  (original description: no original description)","protein_coding"
"PSME_00035581-RA","No alias","Pseudotsuga menziesii","(at5g53480 : 1136.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2272.0) &  (original description: no original description)","protein_coding"
"PSME_00035607-RA","No alias","Pseudotsuga menziesii","(at2g15820 : 609.0) Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage.; ORGANELLE TRANSCRIPT PROCESSING 51 (OTP51); FUNCTIONS IN: endonuclease activity; INVOLVED IN: photosystem I assembly, nuclear mRNA cis splicing, via spliceosome, Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), LAGLIDADG DNA endonuclease (InterPro:IPR004860); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G61990.1); Has 8373 Blast hits to 4744 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 65; Plants - 8172; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"PSME_00036348-RA","No alias","Pseudotsuga menziesii","(at2g24130 : 481.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 293.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00036350-RA","No alias","Pseudotsuga menziesii","(at3g06980 : 229.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00036351-RA","No alias","Pseudotsuga menziesii","(at3g06980 : 171.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00038053-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 2193.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4386.0) &  (original description: no original description)","protein_coding"
"PSME_00038471-RA","No alias","Pseudotsuga menziesii","(at5g03940 : 348.0) mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit; chloroplast signal recognition particle 54 kDa subunit (CPSRP54); FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding, signal sequence binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; LOCATED IN: chloroplast stroma, chloroplast, signal recognition particle, chloroplast targeting, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP (InterPro:IPR004780), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49968|sr541_horvu : 115.0) Signal recognition particle 54 kDa protein 1 (SRP54) - Hordeum vulgare (Barley) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00038809-RA","No alias","Pseudotsuga menziesii","(o49813|olee1_betve : 87.0) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g08685 : 85.1) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00038932-RA","No alias","Pseudotsuga menziesii","(at4g38540 : 258.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00038945-RA","No alias","Pseudotsuga menziesii","(at1g54780 : 192.0) Encodes a thylakoid lumen protein regulating photosystem II repair cycle.; TLP18.3; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF477 (InterPro:IPR007621); Has 209 Blast hits to 209 proteins in 92 species: Archae - 0; Bacteria - 130; Metazoa - 2; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00038994-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039147-RA","No alias","Pseudotsuga menziesii","(p93431|rca_orysa : 723.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (at2g39730 : 706.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 1412.0) &  (original description: no original description)","protein_coding"
"PSME_00039331-RA","No alias","Pseudotsuga menziesii","(at3g47110 : 609.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 411.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"PSME_00039623-RA","No alias","Pseudotsuga menziesii","(at5g14260 : 345.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00039977-RA","No alias","Pseudotsuga menziesii",""(at2g45550 : 293.0) member of CYP76C; ""cytochrome P450, family 76, subfamily C, polypeptide 4"" (CYP76C4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 1 (TAIR:AT2G45560.1); Has 35109 Blast hits to 34843 proteins in 1784 species: Archae - 57; Bacteria - 4750; Metazoa - 11986; Fungi - 7467; Plants - 9491; Viruses - 6; Other Eukaryotes - 1352 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 251.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 586.0) &  (original description: no original description)"","protein_coding"
"PSME_00040449-RA","No alias","Pseudotsuga menziesii","(q8s7e1|cao_orysa : 621.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (at1g44446 : 593.0) Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> .  Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1186.0) &  (original description: no original description)","protein_coding"
"PSME_00040988-RA","No alias","Pseudotsuga menziesii","(at1g08730 : 202.0) Class XI myosin gene; XIC; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 57567 Blast hits to 36765 proteins in 2556 species: Archae - 784; Bacteria - 7621; Metazoa - 29049; Fungi - 4176; Plants - 2435; Viruses - 163; Other Eukaryotes - 13339 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"PSME_00041857-RA","No alias","Pseudotsuga menziesii","(p31251|ube12_wheat : 1366.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at5g06460 : 1355.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2710.0) &  (original description: no original description)","protein_coding"
"PSME_00041920-RA","No alias","Pseudotsuga menziesii","(q43802|sps_orysa : 105.0) Probable sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Oryza sativa (Rice) & (at5g11110 : 103.0) Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation.; sucrose phosphate synthase 2F (SPS2F); FUNCTIONS IN: sucrose-phosphate synthase activity; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 7063 Blast hits to 6941 proteins in 1362 species: Archae - 321; Bacteria - 4772; Metazoa - 8; Fungi - 55; Plants - 761; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00042390-RA","No alias","Pseudotsuga menziesii","(at1g05675 : 244.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1). & (q41819|iaag_maize : 197.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00042408-RA","No alias","Pseudotsuga menziesii","(at5g44680 : 264.0) DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"PSME_00042457-RA","No alias","Pseudotsuga menziesii","(p11432|eli_pea : 87.4) Early light-induced protein, chloroplast precursor (ELIP) - Pisum sativum (Garden pea) & (at4g14690 : 84.3) Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was  downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly  of pigment-binding proteins for photosynthesis.; EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT3G22840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"PSME_00042744-RA","No alias","Pseudotsuga menziesii","(q39654|psal_cucsa : 242.0) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Cucumis sativus (Cucumber) & (at4g12800 : 237.0) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"PSME_00042967-RA","No alias","Pseudotsuga menziesii","(at3g52380 : 152.0) chloroplast RNA-binding protein; chloroplast RNA-binding protein 33 (CP33); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B (TAIR:AT5G50250.1); Has 514069 Blast hits to 499112 proteins in 22048 species: Archae - 10752; Bacteria - 302541; Metazoa - 101965; Fungi - 16255; Plants - 33338; Viruses - 35348; Other Eukaryotes - 13870 (source: NCBI BLink). & (p19684|roc5_nicsy : 144.0) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00043522-RA","No alias","Pseudotsuga menziesii",""(at3g52970 : 375.0) member of CYP76G; ""cytochrome P450, family 76, subfamily G, polypeptide 1"" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37120|c75a2_solme : 357.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 704.0) &  (original description: no original description)"","protein_coding"
"PSME_00043886-RA","No alias","Pseudotsuga menziesii","(at1g24190 : 284.0) Enhances AtERF7-mediated  transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19.; SIN3-like 3 (SNL3); FUNCTIONS IN: transcription repressor activity; INVOLVED IN: negative regulation of transcription, regulation of transcription, DNA-dependent, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"PSME_00043945-RA","No alias","Pseudotsuga menziesii","(at5g17540 : 297.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 176.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00043997-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 732.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 719.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1460.0) &  (original description: no original description)","protein_coding"
"PSME_00044379-RA","No alias","Pseudotsuga menziesii","(q43415|lcyb_capan : 736.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Capsicum annuum (Bell pepper) & (at3g10230 : 726.0) Encodes a protein with lycopene &#946;-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the &#949;-cyclase which adds only one ring, the &#946;-cyclase introduces a ring at both ends of lycopene to form the bicyclic &beta;-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"PSME_00044444-RA","No alias","Pseudotsuga menziesii","(at2g39650 : 170.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00044575-RA","No alias","Pseudotsuga menziesii","(at5g13420 : 272.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00045325-RA","No alias","Pseudotsuga menziesii","(at5g14700 : 253.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (p51110|dfra_vitvi : 112.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00045933-RA","No alias","Pseudotsuga menziesii","(at2g34470 : 170.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00046418-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 279.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00046575-RA","No alias","Pseudotsuga menziesii","(at4g29080 : 256.0) phytochrome-associated protein 2 (PAP2); phytochrome-associated protein 2 (PAP2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of translation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2237 Blast hits to 2234 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 2235; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p0c132|iaa30_orysa : 241.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"PSME_00047035-RA","No alias","Pseudotsuga menziesii","(at4g01320 : 317.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00047071-RA","No alias","Pseudotsuga menziesii","(p22337|stad_ricco : 217.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (at3g02630 : 207.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT5G16240.1); Has 934 Blast hits to 926 proteins in 218 species: Archae - 0; Bacteria - 428; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00047563-RA","No alias","Pseudotsuga menziesii","(at2g30070 : 110.0) Encodes a high affinity potassium transporter.; potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q652j4|hak13_orysa : 110.0) Probable potassium transporter 13 (OsHAK13) - Oryza sativa (Rice) & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00048079-RA","No alias","Pseudotsuga menziesii","(at1g48450 : 345.0) Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT3G17800.1). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00048425-RA","No alias","Pseudotsuga menziesii","(at5g35100 : 182.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, peptidyl-cysteine S-nitrosylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.2); Has 4084 Blast hits to 4084 proteins in 692 species: Archae - 13; Bacteria - 526; Metazoa - 1613; Fungi - 701; Plants - 735; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (q41651|cypb_vicfa : 81.3) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00048797-RA","No alias","Pseudotsuga menziesii","(at1g19250 : 219.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00049778-RA","No alias","Pseudotsuga menziesii","(at5g55580 : 259.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00049866-RA","No alias","Pseudotsuga menziesii","(p48977|adh_maldo : 174.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g77120 : 168.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00050031-RA","No alias","Pseudotsuga menziesii",""(at5g36110 : 442.0) member of CYP716A; ""cytochrome P450, family 716, subfamily A, polypeptide 1"" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 226.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 884.0) &  (original description: no original description)"","protein_coding"
"PSME_00050455-RA","No alias","Pseudotsuga menziesii","(at1g13120 : 110.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00051045-RA","No alias","Pseudotsuga menziesii","(at4g31990 : 434.0) Encodes a plastid-localized aspartate aminotransferase.  Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (p37833|aatc_orysa : 300.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"PSME_00052280-RA","No alias","Pseudotsuga menziesii","(at2g39450 : 310.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00052295-RA","No alias","Pseudotsuga menziesii","(at3g12080 : 156.0) embryo defective 2738 (emb2738); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP-binding, EngA (InterPro:IPR016484), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP binding;GTP binding (TAIR:AT5G39960.1); Has 46500 Blast hits to 25681 proteins in 2968 species: Archae - 249; Bacteria - 36237; Metazoa - 387; Fungi - 432; Plants - 421; Viruses - 0; Other Eukaryotes - 8774 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00052642-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053525-RA","No alias","Pseudotsuga menziesii","(at2g03200 : 289.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"PSME_00054524-RA","No alias","Pseudotsuga menziesii","(p10049|cb21_pinth : 468.0) Chlorophyll a-b binding protein type I, chloroplast precursor (CAB) (LHCP) - Pinus thunbergii (Green pine) (Japanese black pine) & (at3g27690 : 436.0) Encodes Lhcb2.4.  Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"PSME_00054630-RA","No alias","Pseudotsuga menziesii","(at3g47110 : 558.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 466.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"PSME_00055387-RA","No alias","Pseudotsuga menziesii","(at3g47110 : 558.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 445.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1030.0) &  (original description: no original description)","protein_coding"
"PSME_00055768-RA","No alias","Pseudotsuga menziesii","(at5g42760 : 331.0) Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027,  methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00056206-RA","No alias","Pseudotsuga menziesii","(at1g31330 : 247.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (p13192|psaf_horvu : 246.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Hordeum vulgare (Barley) & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"PSME_00057138-RA","No alias","Pseudotsuga menziesii","(at3g09650 : 658.0) RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.; HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1); Has 43769 Blast hits to 13527 proteins in 285 species: Archae - 3; Bacteria - 26; Metazoa - 343; Fungi - 654; Plants - 41314; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1316.0) &  (original description: no original description)","protein_coding"
"Sobic.001G020600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G046900.1","No alias","Sorghum bicolor ","component *(PsaD) of PS-I complex","protein_coding"
"Sobic.001G070500.1","No alias","Sorghum bicolor ","component *(PsaF) of PS-I complex","protein_coding"
"Sobic.001G122300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G177000.1","No alias","Sorghum bicolor ","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"Sobic.001G325700.1","No alias","Sorghum bicolor ","N-acetylglutamate synthase","protein_coding"
"Sobic.001G342800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G368600.1","No alias","Sorghum bicolor ","regulatory protein *(ROQH1) of non-photochemical quenching","protein_coding"
"Sobic.001G377300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G382100.1","No alias","Sorghum bicolor ","protein involved in PS-II assembly *(Psb27)","protein_coding"
"Sobic.001G407600.1","No alias","Sorghum bicolor ","delta-12/delta-15 fatty acid desaturase","protein_coding"
"Sobic.001G435600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G027500.1","No alias","Sorghum bicolor ","amino acid transporter *(AAP)","protein_coding"
"Sobic.002G033900.1","No alias","Sorghum bicolor ","component *(PsaK) of PS-I complex","protein_coding"
"Sobic.002G060800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G112400.1","No alias","Sorghum bicolor ","component *(PGRL1) of cyclic electron flow PGR5-PGRL1 complex","protein_coding"
"Sobic.002G119500.3","No alias","Sorghum bicolor ","component *(PsaE) of PS-I complex","protein_coding"
"Sobic.002G233700.1","No alias","Sorghum bicolor ","dicarboxylate","protein_coding"
"Sobic.002G275300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G297300.1","No alias","Sorghum bicolor ","regulatory factor *(CURT) of thylakoid grana stacking","protein_coding"
"Sobic.002G297700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G298800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G338000.1","No alias","Sorghum bicolor ","component *(LHCb4) of LHC-II complex","protein_coding"
"Sobic.002G339200.2","No alias","Sorghum bicolor ","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"Sobic.002G352100.1","No alias","Sorghum bicolor ","component *(LHCa2) of LHC-I complex","protein_coding"
"Sobic.002G394100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G414400.1","No alias","Sorghum bicolor ","component *(PsbX) of PS-II complex","protein_coding"
"Sobic.002G420300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G421900.1","No alias","Sorghum bicolor ","transcription factor *(DOF)","protein_coding"
"Sobic.003G052500.1","No alias","Sorghum bicolor ","component *(PsaL) of PS-I complex","protein_coding"
"Sobic.003G106900.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G150600.1","No alias","Sorghum bicolor ","pectin acetylesterase *(PAE)","protein_coding"
"Sobic.003G209800.1","No alias","Sorghum bicolor ","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"Sobic.003G209900.1","No alias","Sorghum bicolor ","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"Sobic.003G284800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G293900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G387800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G397200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G035500.1","No alias","Sorghum bicolor ","dicarboxylate","protein_coding"
"Sobic.004G056900.1","No alias","Sorghum bicolor ","component *(LHCa1) of LHC-I complex","protein_coding"
"Sobic.004G181600.2","No alias","Sorghum bicolor ","regulatory protein *(CBP60) of systemic acquired resistance","protein_coding"
"Sobic.004G211200.1","No alias","Sorghum bicolor ","floral promoter *(CONSTANS) & BBX class-I transcription factor","protein_coding"
"Sobic.004G231501.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G238500.1","No alias","Sorghum bicolor ","geranylgeranyl reductase *(CHLP)","protein_coding"
"Sobic.004G251500.1","No alias","Sorghum bicolor ","calcium sensor *(CAS)","protein_coding"
"Sobic.004G302500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G319000.1","No alias","Sorghum bicolor ","protease *(SBT1)","protein_coding"
"Sobic.004G343300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G005400.1","No alias","Sorghum bicolor ","metal-citrate complex transporter *(FRD)","protein_coding"
"Sobic.005G087000.1","No alias","Sorghum bicolor ","component *(LHCb5) of LHC-II complex","protein_coding"
"Sobic.005G127000.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.006G008800.1","No alias","Sorghum bicolor ","component *(E2F) of DREAM cell cycle regulatory complex & E2F-type transcription factor","protein_coding"
"Sobic.006G073500.1","No alias","Sorghum bicolor ","component *(PsaO) of PS-I complex","protein_coding"
"Sobic.006G193200.3","No alias","Sorghum bicolor ","ligand-gated cation channel *(GLR)","protein_coding"
"Sobic.006G204000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G234100.1","No alias","Sorghum bicolor ","glutamyl-tRNA reductase *(HEMA) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.006G238200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G264201.1","No alias","Sorghum bicolor ","component *(LHCb6) of LHC-II complex","protein_coding"
"Sobic.006G264900.1","No alias","Sorghum bicolor ","component *(CHLH) of magnesium-chelatase complex & abscisic acid perception modulator *(ABAR)","protein_coding"
"Sobic.007G052700.1","No alias","Sorghum bicolor ","acyl-CoA-binding protein *(ACBP6)","protein_coding"
"Sobic.007G053800.1","No alias","Sorghum bicolor ","basal Sigma-type transcription factor","protein_coding"
"Sobic.007G116950.1","No alias","Sorghum bicolor ","protein involved in PS-II assembly *(CYP38) & peptidyl-prolyl cis-trans isomerase *(CYP37/CYP38) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.007G136900.1","No alias","Sorghum bicolor ","component *(LHCa4) of LHC-I complex","protein_coding"
"Sobic.007G207800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G011600.2","No alias","Sorghum bicolor ","regulatory protein *(PGRL2) of cyclic electron flow","protein_coding"
"Sobic.009G080900.1","No alias","Sorghum bicolor ","sugar efflux transporter *(SWEET)","protein_coding"
"Sobic.009G165200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G191300.1","No alias","Sorghum bicolor ","component *(PsbW) of PS-II complex","protein_coding"
"Sobic.009G218900.1","No alias","Sorghum bicolor ","phospho-base N-methyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.009G219100.1","No alias","Sorghum bicolor ","photosynthetic acclimation STN7 kinase & STN protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.009G229700.1","No alias","Sorghum bicolor ","component *(PsaH) of PS-I complex","protein_coding"
"Sobic.009G234500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G234600.1","No alias","Sorghum bicolor ","component *(LHCb1/2/3) of LHC-II complex","protein_coding"
"Sobic.009G243500.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase & polygalacturonase *(PGX1-like)","protein_coding"
"Sobic.010G000500.1","No alias","Sorghum bicolor ","plastocyanin electron carrier","protein_coding"
"Sobic.010G005500.1","No alias","Sorghum bicolor ","EC_1.18 oxidoreductase acting on iron-sulfur protein as donor & ferredoxin-NADP oxidoreductase","protein_coding"
"Sobic.010G110601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G181300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G189300.1","No alias","Sorghum bicolor ","component *(LHCa3) of LHC-I complex","protein_coding"
"Sobic.010G201700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g007810","No alias","Solanum lycopersicum","LOW QUALITY:ovate family protein 3","protein_coding"
"Solyc01g014320","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative (AHRD V3.3 *** A0A061E9R4_THECC)","protein_coding"
"Solyc01g067890","No alias","Solanum lycopersicum","1-D-deoxyxylulose 5-phosphate synthase","protein_coding"
"Solyc01g088550","No alias","Solanum lycopersicum","Purine permease family protein (AHRD V3.3 *** B9I8W9_POPTR)","protein_coding"
"Solyc01g090970","No alias","Solanum lycopersicum","14 kDa proline-rich protein DC2.15 (AHRD V3.3 *** A0A151QNX1_CAJCA)","protein_coding"
"Solyc01g095430","No alias","Solanum lycopersicum","Protein CURVATURE THYLAKOID 1A, chloroplastic (AHRD V3.3 *** CUT1A_ARATH)","protein_coding"
"Solyc01g096620","No alias","Solanum lycopersicum","MATH and LRR domain-containing protein PFE0570w, putative isoform 2 (AHRD V3.3 *-* A0A061FQQ6_THECC)","protein_coding"
"Solyc01g096630","No alias","Solanum lycopersicum","Dentin sialophosphoprotein-related, putative isoform 1 (AHRD V3.3 --* A0A061E964_THECC)","protein_coding"
"Solyc01g096640","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g096660","No alias","Solanum lycopersicum","PSII-associated proline-rich protein","protein_coding"
"Solyc01g110440","No alias","Solanum lycopersicum","arginine decarboxylase","protein_coding"
"Solyc01g110530","No alias","Solanum lycopersicum","Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** K4B3R6_SOLLC)","protein_coding"
"Solyc01g110570","No alias","Solanum lycopersicum","Small auxin up-regulated RNA4","protein_coding"
"Solyc01g110940","No alias","Solanum lycopersicum","SAUR-like auxin-responsive protein family (AHRD V3.3 *** AT4G38840.1)","protein_coding"
"Solyc01g111750","No alias","Solanum lycopersicum","Chaperone DnaJ (AHRD V3.3 *** A0A0B0PUN1_GOSAR)","protein_coding"
"Solyc02g005180","No alias","Solanum lycopersicum","Sugar facilitator protein 2","protein_coding"
"Solyc02g070910","No alias","Solanum lycopersicum","Ontology_term=GO:0004675","protein_coding"
"Solyc02g070930","No alias","Solanum lycopersicum","Cytochrome b6-f complex subunit 4 (AHRD V3.3 --* PETD_SPIMX)","protein_coding"
"Solyc02g071380","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G17010.1)","protein_coding"
"Solyc02g078140","No alias","Solanum lycopersicum","MAP kinase kinase kinase 18","protein_coding"
"Solyc02g079250","No alias","Solanum lycopersicum","3'(2'),5'-bisphosphate nucleotidase-like protein (AHRD V3.3 *** Q682R6_ARATH)","protein_coding"
"Solyc02g084930","No alias","Solanum lycopersicum","Cytochrome P450 family protein (AHRD V3.3 *** G7LDW2_MEDTR)","protein_coding"
"Solyc02g092530","No alias","Solanum lycopersicum","Acetamidase/Formamidase family protein (AHRD V3.3 *** AT4G37560.1)","protein_coding"
"Solyc02g092720","No alias","Solanum lycopersicum","LOW QUALITY:BnaC09g34590D protein (AHRD V3.3 *** A0A078CYT8_BRANA)","protein_coding"
"Solyc02g093220","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** D7MKT1_ARALL)","protein_coding"
"Solyc03g005730","No alias","Solanum lycopersicum","Aconitate hydratase (AHRD V3.3 *** A0A059LL79_9CHLO)","protein_coding"
"Solyc03g034400","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *** K4BFW0_SOLLC)","protein_coding"
"Solyc03g058430","No alias","Solanum lycopersicum","Fatty acid desaturase (AHRD V3.3 *** M4QSE6_9ERIC)","protein_coding"
"Solyc03g082600","No alias","Solanum lycopersicum","Cytochrome b5 (AHRD V3.3 *** A0A0C5DKP2_CATRO)","protein_coding"
"Solyc03g095510","No alias","Solanum lycopersicum","serine/threonine protein kinase 2 (AHRD V3.3 *** AT3G08720.4)","protein_coding"
"Solyc03g096290","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 1.7","protein_coding"
"Solyc03g096770","No alias","Solanum lycopersicum","Response to low sulfur protein, putative (AHRD V3.3 *** G7J9Q1_MEDTR)","protein_coding"
"Solyc03g111140","No alias","Solanum lycopersicum","Malate synthase (AHRD V3.3 *** K4BJX7_SOLLC)","protein_coding"
"Solyc03g113240","No alias","Solanum lycopersicum","transmembrane protein, putative (DUF1118) (AHRD V3.3 *** AT1G74730.1)","protein_coding"
"Solyc03g115540","No alias","Solanum lycopersicum","bHLH transcription factor 024","protein_coding"
"Solyc03g115980","No alias","Solanum lycopersicum","Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA)","protein_coding"
"Solyc03g116570","No alias","Solanum lycopersicum","Thiol-disulfide oxidoreductase DCC (AHRD V3.3 *** A0A0K9PRB5_ZOSMR)","protein_coding"
"Solyc04g015750","No alias","Solanum lycopersicum","Magnesium chelatase H subunit (AHRD V3.3 *** F8SPG3_CAMSI)","protein_coding"
"Solyc04g049380","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *** AT2G39190.2)","protein_coding"
"Solyc04g049390","No alias","Solanum lycopersicum","Kinase superfamily protein isoform 1 (AHRD V3.3 *-* A0A061FUY1_THECC)","protein_coding"
"Solyc04g071480","No alias","Solanum lycopersicum","LOW QUALITY:Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR)","protein_coding"
"Solyc04g082630","No alias","Solanum lycopersicum","Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** K4BVZ0_SOLLC)","protein_coding"
"Solyc05g005870","No alias","Solanum lycopersicum","nodulin-related MtN21 family protein","protein_coding"
"Solyc05g008950","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7KAJ2_ARALL)","protein_coding"
"Solyc05g009890","No alias","Solanum lycopersicum","LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G25700.1)","protein_coding"
"Solyc05g010080","No alias","Solanum lycopersicum","Chaperone DnaJ-domain superfamily protein (AHRD V3.3 --* AT1G62970.1)","protein_coding"
"Solyc05g010140","No alias","Solanum lycopersicum","Receptor protein kinase (AHRD V3.3 *-* T2C4B6_BRAJU)","protein_coding"
"Solyc05g013680","No alias","Solanum lycopersicum","GDSL esterase/lipase (AHRD V3.3 *** W9RN10_9ROSA)","protein_coding"
"Solyc05g025890","No alias","Solanum lycopersicum","Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** AT2G06025.6)","protein_coding"
"Solyc05g051660","No alias","Solanum lycopersicum","Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A061EKQ6_THECC)","protein_coding"
"Solyc05g056300","No alias","Solanum lycopersicum","Thioredoxin (AHRD V3.3 *** A0A103YEZ4_CYNCS)","protein_coding"
"Solyc06g065970","No alias","Solanum lycopersicum","14 kDa proline-rich protein DC2.15, putative (AHRD V3.3 *** B9RP24_RICCO)","protein_coding"
"Solyc06g066530","No alias","Solanum lycopersicum","LOW QUALITY:DUF1677 family protein (AHRD V3.3 *** G7LFY6_MEDTR)","protein_coding"
"Solyc06g071230","No alias","Solanum lycopersicum","MYB transcription factor (AHRD V3.3 *** A1DR86_CATRO)","protein_coding"
"Solyc06g072710","No alias","Solanum lycopersicum","Sigma factor (AHRD V3.3 *** Q9SLX3_TOBAC)","protein_coding"
"Solyc07g005440","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** K4CB16_SOLLC)","protein_coding"
"Solyc07g006230","No alias","Solanum lycopersicum","LOW QUALITY:NAC domain-containing protein 78 (AHRD V3.3 --* M7YSE5_TRIUA)","protein_coding"
"Solyc07g017800","No alias","Solanum lycopersicum","La-related protein 6 isoform 1 (AHRD V3.3 *** A0A061GR72_THECC)","protein_coding"
"Solyc07g032490","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT2G26690.1)","protein_coding"
"Solyc07g047850","No alias","Solanum lycopersicum","Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** CB23_ORYSI)","protein_coding"
"Solyc07g054290","No alias","Solanum lycopersicum","photosystem II family protein (AHRD V3.3 *** AT1G03600.1)","protein_coding"
"Solyc07g055260","No alias","Solanum lycopersicum","DnaJ (AHRD V3.3 *** A0A126DIH0_ARAHY)","protein_coding"
"Solyc07g056350","No alias","Solanum lycopersicum","mitogen-activated protein kinase 12","protein_coding"
"Solyc07g066600","No alias","Solanum lycopersicum","phosphoglycerate kinase (AHRD V3.3 *** AT1G79550.2)","protein_coding"
"Solyc08g006160","No alias","Solanum lycopersicum","Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** AT5G19940.1)","protein_coding"
"Solyc08g013670","No alias","Solanum lycopersicum","photosystem I reaction center subunit","protein_coding"
"Solyc08g013730","No alias","Solanum lycopersicum","NOD26-like intrinsic protein5.1","protein_coding"
"Solyc08g075020","No alias","Solanum lycopersicum","Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2)","protein_coding"
"Solyc08g076480","No alias","Solanum lycopersicum","Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** AT2G35490.1)","protein_coding"
"Solyc08g077180","No alias","Solanum lycopersicum","Pyruvate kinase (AHRD V3.3 *** K4CN78_SOLLC)","protein_coding"
"Solyc08g077880","No alias","Solanum lycopersicum","High molecular mass early light-inducible HV58, chloroplastic (AHRD V3.3 *** A0A0B0NUU8_GOSAR)","protein_coding"
"Solyc08g078020","No alias","Solanum lycopersicum","LOW QUALITY:Methionine rich arabinogalactan (AHRD V3.3 *** Q52QJ6_SOLLC)","protein_coding"
"Solyc08g079790","No alias","Solanum lycopersicum","Nucleotide-sugar transporter family protein (AHRD V3.3 *** A0A061G5R7_THECC)","protein_coding"
"Solyc08g080050","No alias","Solanum lycopersicum","PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZP2_9ROSI)","protein_coding"
"Solyc09g007760","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 2.10","protein_coding"
"Solyc09g007770","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 2.1","protein_coding"
"Solyc09g009130","No alias","Solanum lycopersicum","Phytosulfokine 3, putative (AHRD V3.3 *** A0A061ESV9_THECC)","protein_coding"
"Solyc09g011140","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT5G06060.1),Pfam:PF13561","protein_coding"
"Solyc09g074050","No alias","Solanum lycopersicum","2OG-Fe(II) oxygenase family oxidoreductase (AHRD V3.3 *** A0A072VPE6_MEDTR)","protein_coding"
"Solyc09g082650","No alias","Solanum lycopersicum","acireductone dioxygenase","protein_coding"
"Solyc09g083290","No alias","Solanum lycopersicum","auxin-regulated IAA14","protein_coding"
"Solyc09g090960","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G60000.1)","protein_coding"
"Solyc10g008020","No alias","Solanum lycopersicum","CMV 1a interacting protein 1 (AHRD V3.3 *** Q5DT22_TOBAC)","protein_coding"
"Solyc10g008660","No alias","Solanum lycopersicum","Anthocyanin 5-aromatic acyltransferase (AHRD V3.3 *-* A0A0B2REP2_GLYSO)","protein_coding"
"Solyc10g055680","No alias","Solanum lycopersicum","Methyltransferase (AHRD V3.3 *** K4D1F8_SOLLC)","protein_coding"
"Solyc10g077040","No alias","Solanum lycopersicum","putative magnesium-protoporphyrin monomethyl ester cyclase","protein_coding"
"Solyc10g077120","No alias","Solanum lycopersicum","Photosystem II core complex proteins psbY (AHRD V3.3 *** A0A061EES6_THECC)","protein_coding"
"Solyc10g078580","No alias","Solanum lycopersicum","Arabinogalactan peptide 14 (AHRD V3.3 *** AGP14_ARATH)","protein_coding"
"Solyc10g081510","No alias","Solanum lycopersicum","ethylene-responsive methionine synthase","protein_coding"
"Solyc10g081720","No alias","Solanum lycopersicum","fasciclin superfamily protein","protein_coding"
"Solyc10g086170","No alias","Solanum lycopersicum","amidase 1 (AHRD V3.3 *** AT1G08980.1)","protein_coding"
"Solyc11g008250","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *-* AT3G10420.2)","protein_coding"
"Solyc12g005660","No alias","Solanum lycopersicum","Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS)","protein_coding"
"Solyc12g010870","No alias","Solanum lycopersicum","ATP synthase I-like protein","protein_coding"
"Solyc12g011280","No alias","Solanum lycopersicum","Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** K4DCL4_SOLLC)","protein_coding"
"Solyc12g019550","No alias","Solanum lycopersicum","Lipase maturation factor 2 (AHRD V3.3 *** A0A1D1ZBR5_9ARAE)","protein_coding"
"Solyc12g021280","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9HIY8_POPTR)","protein_coding"
"Solyc12g042110","No alias","Solanum lycopersicum","Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 --* B4FWF2_MAIZE)","protein_coding"
"Solyc12g042920","No alias","Solanum lycopersicum","Cytochrome c1, heme protein (AHRD V3.3 *** G7KN99_MEDTR)","protein_coding"
"Sopen04g007830","No alias","Solanum pennellii","CobN/Magnesium Chelatase","protein_coding"