"sequence_id","alias","species","description","type" "129197","No alias","Selaginella moellendorffii ","nitroreductase family protein","protein_coding" "130483","No alias","Selaginella moellendorffii ","Protein phosphatase 2A, regulatory subunit PR55","protein_coding" "145414","No alias","Selaginella moellendorffii ","hydrolases, acting on ester bonds","protein_coding" "164824","No alias","Selaginella moellendorffii ","ARM repeat protein interacting with ABF2","protein_coding" "230624","No alias","Selaginella moellendorffii ","Adaptor protein complex AP-2, alpha subunit","protein_coding" "30648","No alias","Selaginella moellendorffii ","Leucine-rich repeat transmembrane protein kinase","protein_coding" "402470","No alias","Selaginella moellendorffii ","embryo defective 1745","protein_coding" "411220","No alias","Selaginella moellendorffii ","non-intrinsic ABC protein 12","protein_coding" "440330","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "442417","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "446484","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "62955","No alias","Selaginella moellendorffii ","RHO guanyl-nucleotide exchange factor 7","protein_coding" "74938","No alias","Selaginella moellendorffii ","nodulin MtN21 /EamA-like transporter family protein","protein_coding" "85837","No alias","Selaginella moellendorffii ","SITE-1 protease","protein_coding" "86110","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding" "87955","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "A4A49_05111","No alias","Nicotiana attenuata","protein gle1","protein_coding" "A4A49_23450","No alias","Nicotiana attenuata","protein gle1","protein_coding" "AC210013.4_FG008","No alias","Zea mays","embryo defective 1745","protein_coding" "AC234154.1_FG008","No alias","Zea mays","lecithin:cholesterol acyltransferase 3","protein_coding" "At1g01960","No alias","Arabidopsis thaliana","Brefeldin A-inhibited guanine nucleotide-exchange protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC5]","protein_coding" "At1g02330","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - /.../ource: NCBI BLink). [Source:TAIR;Acc:AT1G02330]","protein_coding" "At1g04080","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I448]","protein_coding" "At1g08260","No alias","Arabidopsis thaliana","DNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]","protein_coding" "At1g08600","No alias","Arabidopsis thaliana","CHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]","protein_coding" "At1g11660","No alias","Arabidopsis thaliana","Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]","protein_coding" "At1g13120","No alias","Arabidopsis thaliana","Protein GLE1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPZ7]","protein_coding" "At1g13220","No alias","Arabidopsis thaliana","nuclear matrix constituent protein-related [Source:TAIR;Acc:AT1G13220]","protein_coding" "At1g14460","No alias","Arabidopsis thaliana","Protein STICHEL-like 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HW65]","protein_coding" "At1g17070","No alias","Arabidopsis thaliana","Septin and tuftelin-interacting protein 1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHG6]","protein_coding" "At1g18840","No alias","Arabidopsis thaliana","At1g18840 [Source:UniProtKB/TrEMBL;Acc:Q501D2]","protein_coding" "At1g23230","No alias","Arabidopsis thaliana","Mediator of RNA polymerase II transcription subunit 23 [Source:UniProtKB/Swiss-Prot;Acc:F4I4P3]","protein_coding" "At1g24510","No alias","Arabidopsis thaliana","T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O04450]","protein_coding" "At1g29350","No alias","Arabidopsis thaliana","Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]","protein_coding" "At1g34355","No alias","Arabidopsis thaliana","FHA domain-containing protein PS1 [Source:UniProtKB/Swiss-Prot;Acc:B7SY83]","protein_coding" "At1g49040","No alias","Arabidopsis thaliana","SCD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WQS8]","protein_coding" "At1g62020","No alias","Arabidopsis thaliana","Coatomer subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178WAY4]","protein_coding" "At1g67140","No alias","Arabidopsis thaliana","HEAT repeat-containing protein [Source:TAIR;Acc:AT1G67140]","protein_coding" "At1g70320","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase UPL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T4]","protein_coding" "At1g71720","No alias","Arabidopsis thaliana","F14O23.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9H4]","protein_coding" "At1g73460","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HQ88]","protein_coding" "At1g74030","No alias","Arabidopsis thaliana","Enolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9C4]","protein_coding" "At1g76310","No alias","Arabidopsis thaliana","CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]","protein_coding" "At1g76320","No alias","Arabidopsis thaliana","Protein FAR1-RELATED SEQUENCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQJ7]","protein_coding" "At1g77140","No alias","Arabidopsis thaliana","VPS45 [Source:UniProtKB/TrEMBL;Acc:A0A178WPE4]","protein_coding" "At1g80070","No alias","Arabidopsis thaliana","SUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]","protein_coding" "At1g80930","No alias","Arabidopsis thaliana","At1g80930/F23A5_23 [Source:UniProtKB/TrEMBL;Acc:Q9SAG7]","protein_coding" "At2g14680","No alias","Arabidopsis thaliana","Myosin heavy chain-like protein [Source:UniProtKB/TrEMBL;Acc:F4IGF6]","protein_coding" "At2g16920","No alias","Arabidopsis thaliana","Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]","protein_coding" "At2g20240","No alias","Arabidopsis thaliana","GPI-anchored adhesin-like protein, putative (DUF3741) [Source:UniProtKB/TrEMBL;Acc:Q9SK77]","protein_coding" "At2g20850","No alias","Arabidopsis thaliana","Protein STRUBBELIG-RECEPTOR FAMILY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06BH3]","protein_coding" "At2g31320","No alias","Arabidopsis thaliana","Poly [ADP-ribose] polymerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP54]","protein_coding" "At2g35630","No alias","Arabidopsis thaliana","Protein MOR1 [Source:UniProtKB/Swiss-Prot;Acc:Q94FN2]","protein_coding" "At2g39260","No alias","Arabidopsis thaliana","Regulator of nonsense transcripts UPF2 [Source:UniProtKB/Swiss-Prot;Acc:F4IUX6]","protein_coding" "At2g40130","No alias","Arabidopsis thaliana","Protein SMAX1-LIKE 8 [Source:UniProtKB/Swiss-Prot;Acc:F4IGZ2]","protein_coding" "At2g46020","No alias","Arabidopsis thaliana","ATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]","protein_coding" "At3g04340","No alias","Arabidopsis thaliana","Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4J3N2]","protein_coding" "At3g06400","No alias","Arabidopsis thaliana","Chromatin-remodeling complex ATPase [Source:UniProtKB/TrEMBL;Acc:F4JAV9]","protein_coding" "At3g10140","No alias","Arabidopsis thaliana","DNA repair protein recA homolog 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RY99]","protein_coding" "At3g10380","No alias","Arabidopsis thaliana","SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]","protein_coding" "At3g14330","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g14330 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUL5]","protein_coding" "At3g18790","No alias","Arabidopsis thaliana","AT3G18790 protein [Source:UniProtKB/TrEMBL;Acc:Q9LS97]","protein_coding" "At3g20150","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-12F [Source:UniProtKB/Swiss-Prot;Acc:F4JDI6]","protein_coding" "At3g23070","No alias","Arabidopsis thaliana","CRM-domain containing factor CFM3A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4J2U9]","protein_coding" "At3g23890","No alias","Arabidopsis thaliana","DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:P30182]","protein_coding" "At3g24080","No alias","Arabidopsis thaliana","KRR1 family protein [Source:UniProtKB/TrEMBL;Acc:F4J5D3]","protein_coding" "At3g24320","No alias","Arabidopsis thaliana","DNA mismatch repair protein MSH1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84LK0]","protein_coding" "At3g43600","No alias","Arabidopsis thaliana","Indole-3-acetaldehyde oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q7G192]","protein_coding" "At3g45450","No alias","Arabidopsis thaliana","ClpC-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M1G2]","protein_coding" "At3g46220","No alias","Arabidopsis thaliana","E3 UFM1-protein ligase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J7Z6]","protein_coding" "At3g46960","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH11 [Source:UniProtKB/Swiss-Prot;Acc:F4JAA5]","protein_coding" "At3g47910","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase-related protein [Source:UniProtKB/TrEMBL;Acc:F4JCR3]","protein_coding" "At3g50380","No alias","Arabidopsis thaliana","Vacuolar protein sorting-associated protein, putative (DUF1162) [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ65]","protein_coding" "At3g50590","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]","protein_coding" "At3g54010","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]","protein_coding" "At3g54670","No alias","Arabidopsis thaliana","Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q1P4]","protein_coding" "At4g02030","No alias","Arabidopsis thaliana","Vps51/Vps67 family (Components of vesicular transport) protein [Source:UniProtKB/TrEMBL;Acc:F4JH69]","protein_coding" "At4g02720","No alias","Arabidopsis thaliana","AT4g02720/T10P11_1 [Source:UniProtKB/TrEMBL;Acc:Q8S9I4]","protein_coding" "At4g11130","No alias","Arabidopsis thaliana","RNA-dependent RNA polymerase 2 [Source:UniProtKB/Swiss-Prot;Acc:O82504]","protein_coding" "At4g26190","No alias","Arabidopsis thaliana","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JU71]","protein_coding" "At4g32010","No alias","Arabidopsis thaliana","B3 domain-containing transcription repressor VAL2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CCK4]","protein_coding" "At4g36690","No alias","Arabidopsis thaliana","U2 snRNP auxiliary factor large subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UYD2]","protein_coding" "At4g37210","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94K88]","protein_coding" "At4g38350","No alias","Arabidopsis thaliana","Patched family protein [Source:UniProtKB/TrEMBL;Acc:F4JTN1]","protein_coding" "At5g01400","No alias","Arabidopsis thaliana","HEAT repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M033]","protein_coding" "At5g10630","No alias","Arabidopsis thaliana","Translation elongation factor EF1A/initiation factor IF2gamma family protein [Source:TAIR;Acc:AT5G10630]","protein_coding" "At5g15810","No alias","Arabidopsis thaliana","Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFU5]","protein_coding" "At5g16280","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT5G16280]","protein_coding" "At5g16610","No alias","Arabidopsis thaliana","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G16610]","protein_coding" "At5g17910","No alias","Arabidopsis thaliana","Cardiomyopathy-associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FKN5]","protein_coding" "At5g18570","No alias","Arabidopsis thaliana","EMB3138 [Source:UniProtKB/TrEMBL;Acc:A0A178UG16]","protein_coding" "At5g19310","No alias","Arabidopsis thaliana","Probable ATP-dependent DNA helicase CHR23 [Source:UniProtKB/Swiss-Prot;Acc:F4K128]","protein_coding" "At5g24350","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). [Source:TAIR;Acc:AT5G24350]","protein_coding" "At5g24620","No alias","Arabidopsis thaliana","Pathogenesis-related thaumatin superfamily protein [Source:TAIR;Acc:AT5G24620]","protein_coding" "At5g40520","No alias","Arabidopsis thaliana","unknown protein; Has 3679 Blast hits to 2474 proteins in 390 species: Archae - 10; Bacteria - 571; Metazoa - 1012; Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes - 1270 (source: NCBI BLink). [Source:TAIR;Acc:AT5G40520]","protein_coding" "At5g46070","No alias","Arabidopsis thaliana","Guanylate-binding family protein [Source:UniProtKB/TrEMBL;Acc:F4KG14]","protein_coding" "At5g52520","No alias","Arabidopsis thaliana","Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]","protein_coding" "At5g54670","No alias","Arabidopsis thaliana","Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF4]","protein_coding" "At5g58040","No alias","Arabidopsis thaliana","FIP1[V]-like protein [Source:UniProtKB/Swiss-Prot;Acc:F4KDH9]","protein_coding" "Bradi1g01090","No alias","Brachypodium distachyon","ARF-GAP domain 9","protein_coding" "Bradi1g01507","No alias","Brachypodium distachyon","gametophytic factor 2","protein_coding" "Bradi1g04850","No alias","Brachypodium distachyon","protein phosphatase 2A-4","protein_coding" "Bradi1g06387","No alias","Brachypodium distachyon","cullin4","protein_coding" "Bradi1g07717","No alias","Brachypodium distachyon","ubiquitin-specific protease 26","protein_coding" "Bradi1g10007","No alias","Brachypodium distachyon","GTP-binding protein, HflX","protein_coding" "Bradi1g12330","No alias","Brachypodium distachyon","ZIM-like 1","protein_coding" "Bradi1g14660","No alias","Brachypodium distachyon","DNA/RNA polymerases superfamily protein","protein_coding" "Bradi1g16097","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g16470","No alias","Brachypodium distachyon","Kinase interacting (KIP1-like) family protein","protein_coding" "Bradi1g20067","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi1g20510","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g20830","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding" "Bradi1g21080","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding" "Bradi1g22170","No alias","Brachypodium distachyon","GPI transamidase subunit PIG-U","protein_coding" "Bradi1g26820","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi1g26960","No alias","Brachypodium distachyon","FAR1-related sequence 6","protein_coding" "Bradi1g27710","No alias","Brachypodium distachyon","RPM1 interacting protein 2","protein_coding" "Bradi1g32500","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g36810","No alias","Brachypodium distachyon","embryo defective 1745","protein_coding" "Bradi1g41860","No alias","Brachypodium distachyon","mitogen-activated protein kinase kinase 3","protein_coding" "Bradi1g42257","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi1g44047","No alias","Brachypodium distachyon","FORMS APLOID AND BINUCLEATE CELLS 1C","protein_coding" "Bradi1g44290","No alias","Brachypodium distachyon","microtubule-associated proteins 70-2","protein_coding" "Bradi1g45250","No alias","Brachypodium distachyon","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding" "Bradi1g46550","No alias","Brachypodium distachyon","CTC-interacting domain 7","protein_coding" "Bradi1g49497","No alias","Brachypodium distachyon","SEUSS-like 3","protein_coding" "Bradi1g51507","No alias","Brachypodium distachyon","armadillo repeat kinesin 3","protein_coding" "Bradi1g52400","No alias","Brachypodium distachyon","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Bradi1g54880","No alias","Brachypodium distachyon","Forkhead-associated (FHA) domain-containing protein","protein_coding" "Bradi1g55530","No alias","Brachypodium distachyon","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "Bradi1g55947","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g57222","No alias","Brachypodium distachyon","Cyclin/Brf1-like TBP-binding protein","protein_coding" "Bradi1g62030","No alias","Brachypodium distachyon","Rho GTPase activation protein (RhoGAP) with PH domain","protein_coding" "Bradi1g62320","No alias","Brachypodium distachyon","INO80 ortholog","protein_coding" "Bradi1g62640","No alias","Brachypodium distachyon","Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase","protein_coding" "Bradi1g63360","No alias","Brachypodium distachyon","WWE protein-protein interaction domain protein family","protein_coding" "Bradi1g63530","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi1g64100","No alias","Brachypodium distachyon","evolutionarily conserved C-terminal region 7","protein_coding" "Bradi1g65800","No alias","Brachypodium distachyon","arogenate dehydratase 2","protein_coding" "Bradi1g70460","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi1g70620","No alias","Brachypodium distachyon","ADP-glucose pyrophosphorylase family protein","protein_coding" "Bradi1g74827","No alias","Brachypodium distachyon","armadillo repeat kinesin 2","protein_coding" "Bradi1g77630","No alias","Brachypodium distachyon","Integral membrane protein hemolysin-III homolog","protein_coding" "Bradi2g04280","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding" "Bradi2g05990","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding" "Bradi2g08410","No alias","Brachypodium distachyon","myosin heavy chain-related","protein_coding" "Bradi2g10027","No alias","Brachypodium distachyon","zinc induced facilitator-like 2","protein_coding" "Bradi2g10780","No alias","Brachypodium distachyon","proteasome family protein","protein_coding" "Bradi2g11370","No alias","Brachypodium distachyon","shaggy-related kinase 11","protein_coding" "Bradi2g11627","No alias","Brachypodium distachyon","embryo defective 1745","protein_coding" "Bradi2g12950","No alias","Brachypodium distachyon","chromatin-remodeling protein 11","protein_coding" "Bradi2g17947","No alias","Brachypodium distachyon","SMAD/FHA domain-containing protein","protein_coding" "Bradi2g22466","No alias","Brachypodium distachyon","Protein of unknown function (DUF399 and DUF3411)","protein_coding" "Bradi2g23310","No alias","Brachypodium distachyon","myb domain protein 3r-5","protein_coding" "Bradi2g24957","No alias","Brachypodium distachyon","wound-responsive family protein","protein_coding" "Bradi2g25580","No alias","Brachypodium distachyon","squamosa promoter binding protein-like 7","protein_coding" "Bradi2g26300","No alias","Brachypodium distachyon","LETM1-like protein","protein_coding" "Bradi2g26807","No alias","Brachypodium distachyon","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding" "Bradi2g31887","No alias","Brachypodium distachyon","Homeodomain-like protein","protein_coding" "Bradi2g33180","No alias","Brachypodium distachyon","membrane bound O-acyl transferase (MBOAT) family protein","protein_coding" "Bradi2g33230","No alias","Brachypodium distachyon","histone mono-ubiquitination 2","protein_coding" "Bradi2g33550","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g35800","No alias","Brachypodium distachyon","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Bradi2g41600","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g43740","No alias","Brachypodium distachyon","FTSH protease 11","protein_coding" "Bradi2g44340","No alias","Brachypodium distachyon","SCP1-like small phosphatase 4","protein_coding" "Bradi2g46340","No alias","Brachypodium distachyon","Mitogen activated protein kinase kinase kinase-related","protein_coding" "Bradi2g46850","No alias","Brachypodium distachyon","F-box family protein","protein_coding" "Bradi2g48150","No alias","Brachypodium distachyon","alpha-amylase-like 3","protein_coding" "Bradi2g48830","No alias","Brachypodium distachyon","SNF1 kinase homolog 10","protein_coding" "Bradi2g49790","No alias","Brachypodium distachyon","Integrin-linked protein kinase family","protein_coding" "Bradi2g52450","No alias","Brachypodium distachyon","Disease resistance protein (CC-NBS-LRR class) family","protein_coding" "Bradi2g54230","No alias","Brachypodium distachyon","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding" "Bradi2g60350","No alias","Brachypodium distachyon","G protein alpha subunit 1","protein_coding" "Bradi3g01730","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g06260","No alias","Brachypodium distachyon","Myosin heavy chain-related protein","protein_coding" "Bradi3g06620","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi3g09760","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g10190","No alias","Brachypodium distachyon","Tesmin/TSO1-like CXC domain-containing protein","protein_coding" "Bradi3g10450","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding" "Bradi3g11197","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "Bradi3g12250","No alias","Brachypodium distachyon","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding" "Bradi3g13610","No alias","Brachypodium distachyon","EMBRYO DEFECTIVE 140","protein_coding" "Bradi3g14221","No alias","Brachypodium distachyon","Protein of unknown function (DUF3537)","protein_coding" "Bradi3g15594","No alias","Brachypodium distachyon","HOPZ-ACTIVATED RESISTANCE 1","protein_coding" "Bradi3g16350","No alias","Brachypodium distachyon","Tho complex subunit 7/Mft1p","protein_coding" "Bradi3g18190","No alias","Brachypodium distachyon","evolutionarily conserved C-terminal region 5","protein_coding" "Bradi3g18700","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g18930","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding" "Bradi3g19850","No alias","Brachypodium distachyon","adenylate kinase family protein","protein_coding" "Bradi3g20060","No alias","Brachypodium distachyon","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding" "Bradi3g20460","No alias","Brachypodium distachyon","poly(A) binding protein 2","protein_coding" "Bradi3g22570","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Bradi3g22750","No alias","Brachypodium distachyon","compromised recognition of TCV 1","protein_coding" "Bradi3g26800","No alias","Brachypodium distachyon","histone acetyltransferase of the GNAT family 1","protein_coding" "Bradi3g28320","No alias","Brachypodium distachyon","peroxin-12","protein_coding" "Bradi3g30830","No alias","Brachypodium distachyon","long-chain base (LCB) kinase 1","protein_coding" "Bradi3g32840","No alias","Brachypodium distachyon","Protein of unknown function (DUF3741)","protein_coding" "Bradi3g33240","No alias","Brachypodium distachyon","G2484-1 protein","protein_coding" "Bradi3g35740","No alias","Brachypodium distachyon","plant adhesion molecule 1","protein_coding" "Bradi3g37350","No alias","Brachypodium distachyon","phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding" "Bradi3g43587","No alias","Brachypodium distachyon","phragmoplast-associated kinesin-related protein 1","protein_coding" "Bradi3g43900","No alias","Brachypodium distachyon","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding" "Bradi3g47867","No alias","Brachypodium distachyon","embryo defective 2423","protein_coding" "Bradi3g49100","No alias","Brachypodium distachyon","casein kinase I","protein_coding" "Bradi3g49447","No alias","Brachypodium distachyon","ARF-GAP domain 2","protein_coding" "Bradi3g50310","No alias","Brachypodium distachyon","FUS3-complementing gene 1","protein_coding" "Bradi3g50590","No alias","Brachypodium distachyon","Diacylglycerol kinase family protein","protein_coding" "Bradi3g52980","No alias","Brachypodium distachyon","histidinol phosphate aminotransferase 1","protein_coding" "Bradi3g55060","No alias","Brachypodium distachyon","LEUNIG_homolog","protein_coding" "Bradi3g57300","No alias","Brachypodium distachyon","TRF-like 6","protein_coding" "Bradi3g57667","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Bradi4g02740","No alias","Brachypodium distachyon","calcineurin B-like 3","protein_coding" "Bradi4g19497","No alias","Brachypodium distachyon","Protein of unknown function (DUF760)","protein_coding" "Bradi4g19650","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding" "Bradi4g19990","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding" "Bradi4g26227","No alias","Brachypodium distachyon","ENTH/VHS family protein","protein_coding" "Bradi4g26487","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Bradi4g29190","No alias","Brachypodium distachyon","CD2-binding protein-related","protein_coding" "Bradi4g30260","No alias","Brachypodium distachyon","phosphofructokinase 5","protein_coding" "Bradi4g35720","No alias","Brachypodium distachyon","Ubiquitin-like superfamily protein","protein_coding" "Bradi4g39278","No alias","Brachypodium distachyon","Cyclin/Brf1-like TBP-binding protein","protein_coding" "Bradi4g42050","No alias","Brachypodium distachyon","E2F transcription factor 3","protein_coding" "Bradi5g04567","No alias","Brachypodium distachyon","HEAT repeat ;HECT-domain (ubiquitin-transferase)","protein_coding" "Bradi5g04777","No alias","Brachypodium distachyon","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding" "Bradi5g05230","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Bradi5g07690","No alias","Brachypodium distachyon","dynamin-related protein 3A","protein_coding" "Bradi5g08920","No alias","Brachypodium distachyon","Clp ATPase","protein_coding" "Bradi5g09880","No alias","Brachypodium distachyon","U-box domain-containing protein kinase family protein","protein_coding" "Bradi5g10260","No alias","Brachypodium distachyon","F-box protein 7","protein_coding" "Bradi5g10477","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Bradi5g14097","No alias","Brachypodium distachyon","lipase class 3 family protein","protein_coding" "Bradi5g17160","No alias","Brachypodium distachyon","long-chain base (LCB) kinase 1","protein_coding" "Bradi5g18230","No alias","Brachypodium distachyon","ARM-repeat/Tetratricopeptide repeat (TPR)-like protein","protein_coding" "Bradi5g18610","No alias","Brachypodium distachyon","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding" "Bradi5g20240","No alias","Brachypodium distachyon","Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "Bradi5g20787","No alias","Brachypodium distachyon","yeast YAK1-related gene 1","protein_coding" "Bradi5g22430","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g23320","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g24120","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi5g25540","No alias","Brachypodium distachyon","Alternative oxidase family protein","protein_coding" "Brara.A00924.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01168.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01282.1","No alias","Brassica rapa","AHL clade-B transcription factor","protein_coding" "Brara.A01828.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02082.1","No alias","Brassica rapa","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.A03853.1","No alias","Brassica rapa","transcriptional regulator *(HsfA1) & HSF-type transcription factor","protein_coding" "Brara.A03887.1","No alias","Brassica rapa","rhamnosyltransferase *(RRT)","protein_coding" "Brara.B00793.1","No alias","Brassica rapa","prolyl hydroxylase","protein_coding" "Brara.B02179.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding" "Brara.B03009.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03184.1","No alias","Brassica rapa","aminoalcohol phosphotransferase & aminoalcohol phosphotransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.B03829.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02028.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02089.1","No alias","Brassica rapa","O-acetyltransferase *(RWA)","protein_coding" "Brara.D02329.1","No alias","Brassica rapa","auxin transporter *(AUX/LAX)","protein_coding" "Brara.D02717.1","No alias","Brassica rapa","HD-ZIP I/II-type transcription factor","protein_coding" "Brara.E00276.1","No alias","Brassica rapa","component *(NDUFB11/ESSS) of NADH dehydrogenase beta subcomplex","protein_coding" "Brara.E00851.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F00334.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01163.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F02865.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F02999.1","No alias","Brassica rapa","regulatory protein (CIB) of blue light perception & bHLH-type transcription factor","protein_coding" "Brara.G00265.1","No alias","Brassica rapa","anion channel *(QUAC/ALMT)","protein_coding" "Brara.G02057.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02346.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01417.1","No alias","Brassica rapa","P3A-type proton-translocating ATPase *(AHA)","protein_coding" "Brara.H01425.1","No alias","Brassica rapa","subunit f of ATP synthase membrane MF0 subcomplex","protein_coding" "Brara.H01577.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding" "Brara.H02658.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00872.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I01427.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I01621.1","No alias","Brassica rapa","GPI lipid remodeling O-acyl transferase","protein_coding" "Brara.I02416.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03076.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding" "Brara.I05041.1","No alias","Brassica rapa","regulatory protein *(GLE1) of LOS4 helicase","protein_coding" "Brara.I05487.1","No alias","Brassica rapa","transcriptional repressor *(IAA/AUX)","protein_coding" "Brara.J00733.1","No alias","Brassica rapa","component *(TASH3) of TPLATE AP-2 co-adaptor complex","protein_coding" "Brara.K01408.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K01833.1","No alias","Brassica rapa","histone demethylase *(KDM3)","protein_coding" "Cre01.g007651","No alias","Chlamydomonas reinhardtii","Pseudouridine synthase family protein","protein_coding" "Cre01.g009150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g049400","No alias","Chlamydomonas reinhardtii","HIT-type Zinc finger family protein","protein_coding" "Cre01.g050850","No alias","Chlamydomonas reinhardtii","BRI1 suppressor 1 (BSU1)-like 3","protein_coding" "Cre02.g082600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g088750","No alias","Chlamydomonas reinhardtii","phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases","protein_coding" "Cre02.g089200","No alias","Chlamydomonas reinhardtii","SU(VAR)3-9 homolog 6","protein_coding" "Cre02.g090750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g092500","No alias","Chlamydomonas reinhardtii","RNA helicase, putative","protein_coding" "Cre02.g093700","No alias","Chlamydomonas reinhardtii","phosphate deficiency response 2","protein_coding" "Cre02.g095114","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g096450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g096455","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g104550","No alias","Chlamydomonas reinhardtii","PLANT HOMOLOGOUS TO PARAFIBROMIN","protein_coding" "Cre02.g111150","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding" "Cre03.g150251","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g152450","No alias","Chlamydomonas reinhardtii","SMAD/FHA domain-containing protein","protein_coding" "Cre03.g174500","No alias","Chlamydomonas reinhardtii","Homeodomain-like transcriptional regulator","protein_coding" "Cre03.g180600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g182600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g194800","No alias","Chlamydomonas reinhardtii","CLP-similar protein 3","protein_coding" "Cre04.g217750","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cre04.g221650","No alias","Chlamydomonas reinhardtii","DNA GYRASE A","protein_coding" "Cre04.g222600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g225900","No alias","Chlamydomonas reinhardtii","vesicle-associated membrane protein 727","protein_coding" "Cre04.g231418","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g242602","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g268450","No alias","Chlamydomonas reinhardtii","Transducin family protein / WD-40 repeat family protein","protein_coding" "Cre06.g278191","No alias","Chlamydomonas reinhardtii","PQ-loop repeat family protein / transmembrane family protein","protein_coding" "Cre06.g278258","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g278900","No alias","Chlamydomonas reinhardtii","nuclear pore complex protein-related","protein_coding" "Cre06.g281100","No alias","Chlamydomonas reinhardtii","Protein kinase family protein","protein_coding" "Cre06.g300900","No alias","Chlamydomonas reinhardtii","embryo defective 1745","protein_coding" "Cre07.g312500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g318651","No alias","Chlamydomonas reinhardtii","LSD1-like2","protein_coding" "Cre07.g340950","No alias","Chlamydomonas reinhardtii","xyloglucanase 113","protein_coding" "Cre07.g355400","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre09.g398650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g409801","No alias","Chlamydomonas reinhardtii","HD domain-containing metal-dependent phosphohydrolase family protein","protein_coding" "Cre10.g420400","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding" "Cre10.g424850","No alias","Chlamydomonas reinhardtii","pre-mRNA processing ribonucleoprotein binding region-containing protein","protein_coding" "Cre10.g453900","No alias","Chlamydomonas reinhardtii","cyclophilin71","protein_coding" "Cre11.g467699","No alias","Chlamydomonas reinhardtii","Sec1/munc18-like (SM) proteins superfamily","protein_coding" "Cre12.g508150","No alias","Chlamydomonas reinhardtii","chromatin-remodeling protein 11","protein_coding" "Cre12.g515700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g531050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g547700","No alias","Chlamydomonas reinhardtii","tubulin-tyrosine ligases;tubulin-tyrosine ligases","protein_coding" "Cre12.g556905","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre15.g636650","No alias","Chlamydomonas reinhardtii","snRNA activating complex family protein","protein_coding" "Cre15.g641000","No alias","Chlamydomonas reinhardtii","NUP50 (Nucleoporin 50 kDa) protein","protein_coding" "Cre16.g647602","No alias","Chlamydomonas reinhardtii","chromatin remodeling 1","protein_coding" "Cre16.g654350","No alias","Chlamydomonas reinhardtii","DNA/RNA-binding protein Kin17, conserved region","protein_coding" "Cre16.g655850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g667750","No alias","Chlamydomonas reinhardtii","DNA-directed RNA polymerase II","protein_coding" "Cre16.g671713","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g674739","No alias","Chlamydomonas reinhardtii","GPCR-type G protein 2","protein_coding" "Cre16.g681050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g692400","No alias","Chlamydomonas reinhardtii","MRG family protein","protein_coding" "Cre17.g703200","No alias","Chlamydomonas reinhardtii","SEC14-like 12","protein_coding" "Cre17.g707050","No alias","Chlamydomonas reinhardtii","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Cre17.g713900","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cre17.g715850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "evm.model.contig_2016.13","No alias","Porphyridium purpureum","(at1g02880 : 139.0) Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.; thiamin pyrophosphokinase1 (TPK1); FUNCTIONS IN: thiamin diphosphokinase activity; INVOLVED IN: thiamin metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase 2 (TAIR:AT2G44750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "evm.model.contig_2020.29","No alias","Porphyridium purpureum","(at3g07300 : 196.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)","protein_coding" "evm.model.contig_2043.1","No alias","Porphyridium purpureum","(at5g14460 : 104.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.contig_2044.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2044.34","No alias","Porphyridium purpureum","(at3g10540 : 123.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (p53681|crk_dauca : 103.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 246.0) & (original description: no original description)","protein_coding" "evm.model.contig_2053.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2057.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2058.6","No alias","Porphyridium purpureum",""(at2g42850 : 105.0) member of CYP718; ""cytochrome P450, family 718"" (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (q9axh9|kao1_horvu : 83.2) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 210.0) & (original description: no original description)"","protein_coding" "evm.model.contig_2059.34","No alias","Porphyridium purpureum","(at2g20060 : 100.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "evm.model.contig_2070.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2070.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2079.2","No alias","Porphyridium purpureum","(at1g21370 : 243.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)","protein_coding" "evm.model.contig_2100.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2121.27","No alias","Porphyridium purpureum","(at5g23880 : 382.0) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.; cleavage and polyadenylation specificity factor 100 (CPSF100); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: mRNA cleavage, mRNA polyadenylation, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: mRNA cleavage and polyadenylation specificity factor complex, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 280.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: no original description)","protein_coding" "evm.model.contig_2139.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2141.3","No alias","Porphyridium purpureum","(at2g40570 : 80.1) initiator tRNA phosphoribosyl transferase family protein; FUNCTIONS IN: transferase activity, transferring pentosyl groups; INVOLVED IN: regulation of translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl transferase (InterPro:IPR007306), tRNA A64-2'-O-ribosylphosphate transferase, RIT1 (InterPro:IPR016519); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)","protein_coding" "evm.model.contig_2165.8","No alias","Porphyridium purpureum","(at5g23290 : 81.6) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)","protein_coding" "evm.model.contig_2282.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2348.5","No alias","Porphyridium purpureum","(at3g09320 : 104.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G04270.1); Has 5137 Blast hits to 5129 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2212; Fungi - 755; Plants - 839; Viruses - 0; Other Eukaryotes - 1331 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.contig_2468.6","No alias","Porphyridium purpureum","(at1g19580 : 203.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (reliability: 406.0) & (original description: no original description)","protein_coding" "evm.model.contig_2480.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3385.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3399.11","No alias","Porphyridium purpureum","(at1g65650 : 249.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "evm.model.contig_3413.4","No alias","Porphyridium purpureum","(at5g53850 : 166.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)","protein_coding" "evm.model.contig_3428.1","No alias","Porphyridium purpureum","(at5g61970 : 213.0) signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)","protein_coding" "evm.model.contig_3432.6","No alias","Porphyridium purpureum","(at3g47390 : 201.0) Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.; PHOTOSENSITIVE 1 (PHS1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02464 (InterPro:IPR012816), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin-specific deaminase, C-terminal (InterPro:IPR011549), Bacterial bifunctional deaminase-reductase, C-terminal (InterPro:IPR002734), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G20960.1). & (reliability: 402.0) & (original description: no original description)","protein_coding" "evm.model.contig_3446.10","No alias","Porphyridium purpureum","(o24304|pfta_pea : 120.0) Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferas & (at3g59380 : 110.0) Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.; farnesyltransferase A (FTA); CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1351 Blast hits to 1070 proteins in 249 species: Archae - 32; Bacteria - 58; Metazoa - 584; Fungi - 296; Plants - 191; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "evm.model.contig_3464.2","No alias","Porphyridium purpureum","(at4g17300 : 185.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)","protein_coding" "evm.model.contig_3487.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3491.10","No alias","Porphyridium purpureum","(at4g22720 : 450.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 900.0) & (original description: no original description)","protein_coding" "evm.model.contig_3495.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3527.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3661.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3698.1","No alias","Porphyridium purpureum","(at4g33110 : 385.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (reliability: 770.0) & (original description: no original description)","protein_coding" "evm.model.contig_439.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4403.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.21","No alias","Porphyridium purpureum","(at1g13120 : 102.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_4418.24","No alias","Porphyridium purpureum","(at1g08940 : 156.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.contig_4429.3","No alias","Porphyridium purpureum","(at5g40280 : 192.0) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.; ENHANCED RESPONSE TO ABA 1 (ERA1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 2257 Blast hits to 1610 proteins in 263 species: Archae - 4; Bacteria - 30; Metazoa - 707; Fungi - 630; Plants - 303; Viruses - 4; Other Eukaryotes - 579 (source: NCBI BLink). & (q04903|pftb_pea : 176.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 384.0) & (original description: no original description)","protein_coding" "evm.model.contig_4443.3","No alias","Porphyridium purpureum","(at1g19120 : 102.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G14080.2); Has 1149 Blast hits to 1149 proteins in 232 species: Archae - 65; Bacteria - 0; Metazoa - 426; Fungi - 329; Plants - 203; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_4449.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4457.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_446.7","No alias","Porphyridium purpureum","(at1g34130 : 659.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1318.0) & (original description: no original description)","protein_coding" "evm.model.contig_449.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4501.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_456.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4619.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_467.3","No alias","Porphyridium purpureum","(at4g25120 : 144.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)","protein_coding" "evm.model.contig_472.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_473.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_482.11","No alias","Porphyridium purpureum","(at5g66680 : 223.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description)","protein_coding" "evm.model.contig_491.2","No alias","Porphyridium purpureum","(at1g67730 : 152.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "evm.model.contig_515.3","No alias","Porphyridium purpureum","(at2g03120 : 178.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description)","protein_coding" "evm.model.contig_532.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_541.3","No alias","Porphyridium purpureum","(at3g56190 : 184.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93798|snaa_vitvi : 177.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Vitis vinifera (Grape) & (reliability: 368.0) & (original description: no original description)","protein_coding" "evm.model.contig_550.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_560.12","No alias","Porphyridium purpureum","(at1g10580 : 333.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description)","protein_coding" "evm.model.contig_566.8","No alias","Porphyridium purpureum","(at1g27970 : 130.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 122.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.tig00000093.37","No alias","Cyanophora paradoxa","(at5g45820 : 125.0) Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.; CBL-interacting protein kinase 20 (CIPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 1 (TAIR:AT5G58380.1); Has 132772 Blast hits to 130743 proteins in 4620 species: Archae - 210; Bacteria - 15587; Metazoa - 48907; Fungi - 13398; Plants - 32037; Viruses - 531; Other Eukaryotes - 22102 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 114.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 232.0) & (original description: no original description)","protein_coding" "evm.model.tig00000178.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000203.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000217.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000217.42","No alias","Cyanophora paradoxa","(at1g65660 : 353.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 706.0) & (original description: no original description)","protein_coding" "evm.model.tig00000342.29","No alias","Cyanophora paradoxa","(at3g06910 : 121.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity.; UB-like protease 1A (ULP1A); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1394 Blast hits to 1393 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 593; Fungi - 272; Plants - 373; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "evm.model.tig00000350.27","No alias","Cyanophora paradoxa","(at4g24490 : 149.0) RAB geranylgeranyl transferase alpha subunit 1; FUNCTIONS IN: protein prenyltransferase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112 proteins in 396 species: Archae - 22; Bacteria - 493; Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2; Other Eukaryotes - 588 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "evm.model.tig00000361.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000402.40","No alias","Cyanophora paradoxa","(at1g13120 : 81.3) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)","protein_coding" "evm.model.tig00000404.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000480.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000498.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000523.43","No alias","Cyanophora paradoxa","(at2g39770 : 481.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (reliability: 962.0) & (original description: no original description)","protein_coding" "evm.model.tig00000615.36","No alias","Cyanophora paradoxa","(p50362|g3pa_chlre : 150.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Chlamydomonas reinhardtii & (at3g26650 : 139.0) Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).; glyceraldehyde 3-phosphate dehydrogenase A subunit (GAPA); FUNCTIONS IN: protein binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (TAIR:AT1G12900.1); Has 24893 Blast hits to 24884 proteins in 6192 species: Archae - 47; Bacteria - 10870; Metazoa - 2226; Fungi - 2780; Plants - 3758; Viruses - 0; Other Eukaryotes - 5212 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "evm.model.tig00000615.64","No alias","Cyanophora paradoxa","(at5g43720 : 111.0) Protein of unknown function (DUF2361); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2361 (InterPro:IPR019310); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2361) (TAIR:AT1G04230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "evm.model.tig00000704.21","No alias","Cyanophora paradoxa","(at4g02730 : 164.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (p93107|pf20_chlre : 141.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.tig00000704.35","No alias","Cyanophora paradoxa","(at5g19680 : 188.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G22320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description)","protein_coding" "evm.model.tig00000704.49","No alias","Cyanophora paradoxa","(at3g52090 : 141.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (reliability: 282.0) & (original description: no original description)","protein_coding" "evm.model.tig00000718.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000734.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000754.23","No alias","Cyanophora paradoxa","(at3g07590 : 167.0) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT4G02840.1). & (reliability: 334.0) & (original description: no original description)","protein_coding" "evm.model.tig00000842.2","No alias","Cyanophora paradoxa","(at3g26560 : 568.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1136.0) & (original description: no original description)","protein_coding" "evm.model.tig00000863.17","No alias","Cyanophora paradoxa","(at1g73720 : 679.0) Encodes SMU1, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 1 (SMU1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 78641 Blast hits to 32338 proteins in 893 species: Archae - 70; Bacteria - 10419; Metazoa - 31204; Fungi - 16808; Plants - 9656; Viruses - 6; Other Eukaryotes - 10478 (source: NCBI BLink). & (o24076|gblp_medsa : 90.5) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 1358.0) & (original description: no original description)","protein_coding" "evm.model.tig00000863.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000912.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000912.17","No alias","Cyanophora paradoxa","(at5g06160 : 337.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 674.0) & (original description: no original description)","protein_coding" "evm.model.tig00000944.41","No alias","Cyanophora paradoxa","(at5g59420 : 231.0) OSBP(oxysterol binding protein)-related protein 3C (ORP3C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)","protein_coding" "evm.model.tig00001003.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001029.19","No alias","Cyanophora paradoxa","(at2g18510 : 282.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description)","protein_coding" "evm.model.tig00001107.11","No alias","Cyanophora paradoxa","(at4g34640 : 234.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 468.0) & (original description: no original description)","protein_coding" "evm.model.tig00001107.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001206.15","No alias","Cyanophora paradoxa","(at5g28740 : 754.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 1508.0) & (original description: no original description)","protein_coding" "evm.model.tig00001234.10","No alias","Cyanophora paradoxa","(at2g43790 : 294.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (q6z437|mpk3_orysa : 293.0) Mitogen-activated protein kinase 3 (EC 2.7.11.24) (MAP kinase 3) (OsMAP3) (MAP kinase 2) (OsMAPK2) - Oryza sativa (Rice) & (reliability: 534.0) & (original description: no original description)","protein_coding" "evm.model.tig00001372.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001542.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020531.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020539.41","No alias","Cyanophora paradoxa","(at4g08580 : 124.0) microfibrillar-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT5G17900.1); Has 41823 Blast hits to 26074 proteins in 1611 species: Archae - 271; Bacteria - 4310; Metazoa - 18112; Fungi - 3731; Plants - 1727; Viruses - 240; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)","protein_coding" "evm.model.tig00020544.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.144","No alias","Cyanophora paradoxa","(q8li34|myst1_orysa : 436.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (at5g64610 : 435.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 870.0) & (original description: no original description)","protein_coding" "evm.model.tig00020553.160","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.177","No alias","Cyanophora paradoxa",""(at3g19980 : 448.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.; ""flower-specific, phytochrome-associated protein phosphatase 3"" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgh7|pp2a_tobac : 338.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 896.0) & (original description: no original description)"","protein_coding" "evm.model.tig00020563.179","No alias","Cyanophora paradoxa",""(at3g19980 : 471.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.; ""flower-specific, phytochrome-associated protein phosphatase 3"" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgh7|pp2a_tobac : 362.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 942.0) & (original description: no original description)"","protein_coding" "evm.model.tig00020614.99","No alias","Cyanophora paradoxa","(at4g21800 : 311.0) Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).; quatre-quart2 (QQT2); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division; LOCATED IN: microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) & (original description: no original description)","protein_coding" "evm.model.tig00020918.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.101","No alias","Cyanophora paradoxa","(at5g58030 : 219.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)","protein_coding" "evm.model.tig00021254.24","No alias","Cyanophora paradoxa","(at1g48900 : 458.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (p49969|sr542_horvu : 456.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 866.0) & (original description: no original description)","protein_coding" "evm.model.tig00021312.50","No alias","Cyanophora paradoxa","(at5g37370 : 136.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00021357.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021463.20","No alias","Cyanophora paradoxa","(p93798|snaa_vitvi : 281.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Vitis vinifera (Grape) & (at3g56190 : 274.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 548.0) & (original description: no original description)","protein_coding" "evm.model.tig00021464.17","No alias","Cyanophora paradoxa","(at1g53500 : 393.0) encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development.; MUCILAGE-MODIFIED 4 (MUM4); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, catalytic activity, UDP-glucose 4,6-dehydratase activity, UDP-L-rhamnose synthase activity; INVOLVED IN: seed coat development, UDP-rhamnose biosynthetic process, mucilage biosynthetic process, metabolic process; LOCATED IN: soluble fraction; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 53909 Blast hits to 53717 proteins in 3029 species: Archae - 941; Bacteria - 31079; Metazoa - 1146; Fungi - 539; Plants - 1500; Viruses - 107; Other Eukaryotes - 18597 (source: NCBI BLink). & (q43070|gale1_pea : 100.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 786.0) & (original description: no original description)","protein_coding" "evm.model.tig00021464.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "Glyma.01G064400","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding" "Glyma.02G158100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G267300","No alias","Glycine max","histone mono-ubiquitination 2","protein_coding" "Glyma.03G178500","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.03G219700","No alias","Glycine max","TRICHOME BIREFRINGENCE-LIKE 6","protein_coding" "Glyma.04G091700","No alias","Glycine max","ubiquitin-specific protease 16","protein_coding" "Glyma.04G184600","No alias","Glycine max","Phox (PX) domain-containing protein","protein_coding" "Glyma.04G245400","No alias","Glycine max","histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)","protein_coding" "Glyma.05G006700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.05G054900","No alias","Glycine max","nudix hydrolase homolog 14","protein_coding" "Glyma.05G080100","No alias","Glycine max","histidine acid phosphatase family protein","protein_coding" "Glyma.05G135000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.05G202900","No alias","Glycine max","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding" "Glyma.05G209700","No alias","Glycine max","homolog of xeroderma pigmentosum complementation group B 1","protein_coding" "Glyma.06G081600","No alias","Glycine max","adaptin family protein","protein_coding" "Glyma.06G089000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G112300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G127500","No alias","Glycine max","splicing factor-related","protein_coding" "Glyma.06G127800","No alias","Glycine max","SET domain protein 16","protein_coding" "Glyma.07G089600","No alias","Glycine max","CCAAT-displacement protein alternatively spliced product","protein_coding" "Glyma.08G014500","No alias","Glycine max","bromo-adjacent homology (BAH) domain-containing protein","protein_coding" "Glyma.08G023800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G209500","No alias","Glycine max","mRNA capping enzyme family protein","protein_coding" "Glyma.08G276400","No alias","Glycine max","aldehyde dehydrogenase 6B2","protein_coding" "Glyma.09G234500","No alias","Glycine max","shoot gravitropism 2 (SGR2)","protein_coding" "Glyma.10G032400","No alias","Glycine max","galacturonosyltransferase 6","protein_coding" "Glyma.10G127000","No alias","Glycine max","Uncharacterized protein family (UPF0016)","protein_coding" "Glyma.10G181500","No alias","Glycine max","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding" "Glyma.10G193000","No alias","Glycine max","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)","protein_coding" "Glyma.10G282000","No alias","Glycine max","ubiquitin-conjugating enzyme 23","protein_coding" "Glyma.11G011700","No alias","Glycine max","exportin 1A","protein_coding" "Glyma.11G145854","No alias","Glycine max","NOT2 / NOT3 / NOT5 family","protein_coding" "Glyma.11G197900","No alias","Glycine max","high-level expression of sugar-inducible gene 2","protein_coding" "Glyma.11G237400","No alias","Glycine max","ENTH/VHS family protein","protein_coding" "Glyma.11G244100","No alias","Glycine max","embryo defective 1745","protein_coding" "Glyma.12G052400","No alias","Glycine max","protein kinase family protein","protein_coding" "Glyma.12G077400","No alias","Glycine max","ATP-dependent helicase family protein","protein_coding" "Glyma.12G084300","No alias","Glycine max","PHD finger family protein","protein_coding" "Glyma.13G091700","No alias","Glycine max","Alg9-like mannosyltransferase family","protein_coding" "Glyma.13G110100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G187300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G196800","No alias","Glycine max","Polymerase/histidinol phosphatase-like","protein_coding" "Glyma.13G313500","No alias","Glycine max","NIMA (never in mitosis, gene A)-related 6","protein_coding" "Glyma.14G021200","No alias","Glycine max","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein","protein_coding" "Glyma.14G161200","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Glyma.14G196400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G187700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.16G015100","No alias","Glycine max","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "Glyma.16G077500","No alias","Glycine max","golgin candidate 1","protein_coding" "Glyma.16G101100","No alias","Glycine max","GPI transamidase component Gpi16 subunit family protein","protein_coding" "Glyma.17G029400","No alias","Glycine max","Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3","protein_coding" "Glyma.17G122200","No alias","Glycine max","BED zinc finger ;hAT family dimerisation domain","protein_coding" "Glyma.18G013000","No alias","Glycine max","embryo defective 1745","protein_coding" "Glyma.18G046800","No alias","Glycine max","auxin response factor 8","protein_coding" "Glyma.19G069800","No alias","Glycine max","like SEX4 1","protein_coding" "Glyma.19G129000","No alias","Glycine max","general transcription factor II H2","protein_coding" "Glyma.19G153900","No alias","Glycine max","Tudor/PWWP/MBT domain-containing protein","protein_coding" "Glyma.19G158900","No alias","Glycine max","Kinase interacting (KIP1-like) family protein","protein_coding" "Glyma.19G179300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.20G055700","No alias","Glycine max","Plant transposase (Ptta/En/Spm family)","protein_coding" "Glyma.20G089700","No alias","Glycine max","Protein of unknown function (DUF300)","protein_coding" "GRMZM2G002493","No alias","Zea mays","isocitrate dehydrogenase","protein_coding" "GRMZM2G014341","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G014558","No alias","Zea mays","cellulose synthase like E1","protein_coding" "GRMZM2G015869","No alias","Zea mays","PQ-loop repeat family protein / transmembrane family protein","protein_coding" "GRMZM2G031837","No alias","Zea mays","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "GRMZM2G039385","No alias","Zea mays","phosphatidyl serine synthase family protein","protein_coding" "GRMZM2G062495","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G090149","No alias","Zea mays","Na+/H+ antiporter 6","protein_coding" "GRMZM2G091276","No alias","Zea mays","Auxin-responsive GH3 family protein","protein_coding" "GRMZM2G097854","No alias","Zea mays","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "GRMZM2G099056","No alias","Zea mays","exocyst complex component sec3A","protein_coding" "GRMZM2G107120","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G113453","No alias","Zea mays","Calmodulin-binding protein","protein_coding" "GRMZM2G115766","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G118479","No alias","Zea mays","Integrase-type DNA-binding superfamily protein","protein_coding" "GRMZM2G138566","No alias","Zea mays","calcium-binding EF hand family protein","protein_coding" "GRMZM2G159307","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G160273","No alias","Zea mays","Drought-responsive family protein","protein_coding" "GRMZM2G354053","No alias","Zea mays","Plant protein of unknown function (DUF827)","protein_coding" "GRMZM2G356198","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G377115","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "GRMZM2G391936","No alias","Zea mays","ADP glucose pyrophosphorylase large subunit 1","protein_coding" "GRMZM2G417217","No alias","Zea mays","embryo defective 1745","protein_coding" "GRMZM2G434317","No alias","Zea mays","Protein of unknown function (DUF707)","protein_coding" "GRMZM2G536668","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G824600","No alias","Zea mays","GroES-like zinc-binding dehydrogenase family protein","protein_coding" "GRMZM5G848733","No alias","Zea mays","AGC kinase 1.5","protein_coding" "GRMZM5G851409","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G855200","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "Kfl00005_0650","kfl00005_0650_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00006_0550","kfl00006_0550_v1.1","Klebsormidium nitens","(at3g20050 : 798.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (p40412|tcpe1_avesa : 236.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1596.0) & (original description: no original description)","protein_coding" "Kfl00008_0150","kfl00008_0150_v1.1","Klebsormidium nitens","(at4g03100 : 268.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 3907 Blast hits to 3903 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 2865; Fungi - 460; Plants - 187; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)","protein_coding" "Kfl00048_0170","kfl00048_0170_v1.1","Klebsormidium nitens","(at3g12380 : 538.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.; actin-related protein 5 (ARP5); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1). & (p20904|act_volca : 107.0) Actin - Volvox carteri & (reliability: 1076.0) & (original description: no original description)","protein_coding" "Kfl00052_0180","kfl00052_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00104_0260","kfl00104_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00110_0140","kfl00110_0140_v1.1","Klebsormidium nitens","(at5g43500 : 327.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 9 (ARP9); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) & (original description: no original description)","protein_coding" "Kfl00114_0060","kfl00114_0060_v1.1","Klebsormidium nitens","(at1g43860 : 349.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (reliability: 698.0) & (original description: no original description)","protein_coding" "Kfl00117_0150","kfl00117_0150_v1.1","Klebsormidium nitens","(at4g21800 : 394.0) Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).; quatre-quart2 (QQT2); FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: embryo development, cell division; LOCATED IN: microtubule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G12790.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 788.0) & (original description: no original description)","protein_coding" "Kfl00133_0190","kfl00133_0190_v1.1","Klebsormidium nitens","(at1g09770 : 814.0) Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.; cell division cycle 5 (CDC5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, defense response signaling pathway, resistance gene-dependent, defense response to bacterium, defense response to fungus, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3351 (InterPro:IPR021786), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 13137 Blast hits to 10813 proteins in 768 species: Archae - 14; Bacteria - 356; Metazoa - 3570; Fungi - 914; Plants - 4936; Viruses - 8; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 1628.0) & (original description: no original description)","protein_coding" "Kfl00134_0030","kfl00134_0030_v1.1","Klebsormidium nitens","(at1g48380 : 207.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description)","protein_coding" "Kfl00138_0170","kfl00138_0170_v1.1","Klebsormidium nitens","(at1g32750 : 489.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (reliability: 978.0) & (original description: no original description)","protein_coding" "Kfl00246_0070","kfl00246_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00352_0010","kfl00352_0010_v1.1","Klebsormidium nitens","(at3g60300 : 162.0) RWD domain-containing protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575). & (reliability: 324.0) & (original description: no original description)","protein_coding" "Kfl00372_0110","kfl00372_0110_v1.1","Klebsormidium nitens","(at3g18480 : 701.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 1402.0) & (original description: no original description)","protein_coding" "Kfl00390_0080","kfl00390_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00406_0050","kfl00406_0050_v1.1","Klebsormidium nitens","(at4g11860 : 213.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G22960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)","protein_coding" "Kfl00439_0070","kfl00439_0070_v1.1","Klebsormidium nitens","(at5g67270 : 96.7) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)","protein_coding" "Kfl00450_0060","kfl00450_0060_v1.1","Klebsormidium nitens","(at3g50530 : 558.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (p53681|crk_dauca : 547.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 1044.0) & (original description: no original description)","protein_coding" "Kfl00470_0120","kfl00470_0120_v1.1","Klebsormidium nitens","(at1g09280 : 335.0) CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "Kfl00472_0050","kfl00472_0050_v1.1","Klebsormidium nitens","(at1g13120 : 121.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "Kfl00499_0080","kfl00499_0080_v1.1","Klebsormidium nitens","(at1g26520 : 189.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 8517 Blast hits to 8427 proteins in 1716 species: Archae - 88; Bacteria - 6047; Metazoa - 151; Fungi - 280; Plants - 232; Viruses - 0; Other Eukaryotes - 1719 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)","protein_coding" "Kfl00689_0040","kfl00689_0040_v1.1","Klebsormidium nitens","(at3g12140 : 100.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT5G06780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "Kfl00714_0060","kfl00714_0060_v1.1","Klebsormidium nitens","(at1g18370 : 639.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (p46869|fla10_chlre : 233.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1278.0) & (original description: no original description)","protein_coding" "Kfl00817_0020","kfl00817_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00845_0010","kfl00845_0010_v1.1","Klebsormidium nitens","(at5g14710 : 81.6) CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)","protein_coding" "LOC_Os01g06050","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g06240","No alias","Oryza sativa","protein kinase, putative, expressed","protein_coding" "LOC_Os01g21630","No alias","Oryza sativa","pectinacetylesterase domain containing protein, expressed","protein_coding" "LOC_Os01g59940","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g19640","No alias","Oryza sativa","IQ calmodulin-binding motif family protein, putative, expressed","protein_coding" "LOC_Os02g37180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g38250","No alias","Oryza sativa","EMB1745, putative, expressed","protein_coding" "LOC_Os02g49850","No alias","Oryza sativa","plastocyanin-like domain containing protein, putative, expressed","protein_coding" "LOC_Os02g53510","No alias","Oryza sativa","oxidoreductase/ transition metal ion binding protein, putative, expressed","protein_coding" "LOC_Os02g58740","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g02860","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding" "LOC_Os04g31430","No alias","Oryza sativa","RALFL30 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed","protein_coding" "LOC_Os04g35080","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding" "LOC_Os04g35780","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g45270","No alias","Oryza sativa","aspartyl protease family protein, putative, expressed","protein_coding" "LOC_Os05g05070","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g28530","No alias","Oryza sativa","glutaredoxin, putative, expressed","protein_coding" "LOC_Os05g46430","No alias","Oryza sativa","60S ribosomal protein L28-1, putative, expressed","protein_coding" "LOC_Os06g01860","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g10890","No alias","Oryza sativa","sterol carrier protein-2, putative, expressed","protein_coding" "LOC_Os06g39050","No alias","Oryza sativa","syntaxin, putative, expressed","protein_coding" "LOC_Os06g44275","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g05110","No alias","Oryza sativa","PLA IIIA/PLP7, putative, expressed","protein_coding" "LOC_Os07g07150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g33690","No alias","Oryza sativa","NBS-LRR type disease resistance protein Hom-F, putative, expressed","protein_coding" "LOC_Os07g38030","No alias","Oryza sativa","GRAS family transcription factor domain containing protein, expressed","protein_coding" "LOC_Os07g38830","No alias","Oryza sativa","hydrolase, alpha/beta fold family domain containing protein, expressed","protein_coding" "LOC_Os07g41350","No alias","Oryza sativa","B12D protein, putative, expressed","protein_coding" "LOC_Os08g20885","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass","protein_coding" "LOC_Os08g24790","No alias","Oryza sativa","AIR12, putative, expressed","protein_coding" "LOC_Os08g38440","No alias","Oryza sativa","GRAM and C2 domains containing protein, putative, expressed","protein_coding" "LOC_Os08g39850","No alias","Oryza sativa","lipoxygenase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os08g41320","No alias","Oryza sativa","BHLH transcription factor, putative, expressed","protein_coding" "LOC_Os09g02750","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g25950","No alias","Oryza sativa","regulator protein, putative, expressed","protein_coding" "LOC_Os09g26330","No alias","Oryza sativa","hypro1, putative, expressed","protein_coding" "LOC_Os09g35680","No alias","Oryza sativa","OsFBX339 - F-box domain containing protein, expressed","protein_coding" "LOC_Os10g01670","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os10g04210","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g26150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g06340","No alias","Oryza sativa","ubiquinol-cytochrome C reductase hinge protein, putative, expressed","protein_coding" "LOC_Os11g06770","No alias","Oryza sativa","ethylene-responsive transcription factor ERF110, putative, expressed","protein_coding" "LOC_Os11g43520","No alias","Oryza sativa","OsGrx_C17 - glutaredoxin subgroup III, expressed","protein_coding" "LOC_Os12g24150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g32250","No alias","Oryza sativa","WRKY96, expressed","protein_coding" "LOC_Os12g33946","No alias","Oryza sativa","cytochrome c oxidase subunit 1, putative, expressed","protein_coding" "MA_10003489g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_1022031g0010","No alias","Picea abies","(at1g26190 : 212.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)","protein_coding" "MA_10323238g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10426106g0010","No alias","Picea abies","(at2g16280 : 194.0) Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 9 (KCS9); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: response to cold, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 4 (TAIR:AT1G19440.1); Has 4705 Blast hits to 4688 proteins in 1155 species: Archae - 0; Bacteria - 1679; Metazoa - 0; Fungi - 8; Plants - 2880; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "MA_10428997g0010","No alias","Picea abies","(at5g59610 : 137.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 23649 Blast hits to 23644 proteins in 3244 species: Archae - 193; Bacteria - 9673; Metazoa - 3994; Fungi - 2050; Plants - 2390; Viruses - 23; Other Eukaryotes - 5326 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "MA_10434433g0010","No alias","Picea abies","(at3g45980 : 175.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.; HTB9; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1); Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0; Bacteria - 64; Metazoa - 2275; Fungi - 213; Plants - 487; Viruses - 0; Other Eukaryotes - 577 (source: NCBI BLink). & (q1s9i9|h2b1_medtr : 172.0) Probable histone H2B.1 - Medicago truncatula (Barrel medic) & (reliability: 350.0) & (original description: no original description)","protein_coding" "MA_10435958g0010","No alias","Picea abies","(at4g18250 : 98.6) receptor serine/threonine kinase, putative; FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, LP.02 two leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 120088 Blast hits to 117149 proteins in 4431 species: Archae - 164; Bacteria - 12523; Metazoa - 44044; Fungi - 10148; Plants - 35501; Viruses - 371; Other Eukaryotes - 17337 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description)","protein_coding" "MA_111050g0020","No alias","Picea abies","(at3g07090 : 80.5) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "MA_137121g0010","No alias","Picea abies","(at5g02540 : 316.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 632.0) & (original description: no original description)","protein_coding" "MA_1498g0010","No alias","Picea abies","(at3g24320 : 128.0) Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.; MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)","protein_coding" "MA_153598g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_161398g0010","No alias","Picea abies","(q9xhg2|fls_maldo : 282.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Malus domestica (Apple) (Malus sylvestris) & (at5g08640 : 278.0) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.; flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1). & (reliability: 556.0) & (original description: no original description)","protein_coding" "MA_16457g0010","No alias","Picea abies","(at2g22070 : 558.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 138.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1028.0) & (original description: no original description)","protein_coding" "MA_171703g0010","No alias","Picea abies","(at1g12680 : 223.0) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 29 (TAIR:AT1G76040.2); Has 127165 Blast hits to 125151 proteins in 3799 species: Archae - 184; Bacteria - 15080; Metazoa - 45775; Fungi - 13042; Plants - 31031; Viruses - 550; Other Eukaryotes - 21503 (source: NCBI BLink). & (p28583|cdpk_soybn : 144.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 446.0) & (original description: no original description)","protein_coding" "MA_181618g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_183840g0010","No alias","Picea abies","(at5g25610 : 205.0) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21745|ea30_vicfa : 105.0) Embryonic abundant protein VF30.1 precursor - Vicia faba (Broad bean) & (reliability: 410.0) & (original description: no original description)","protein_coding" "MA_184439g0010","No alias","Picea abies","(at5g17600 : 109.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)","protein_coding" "MA_185331g0010","No alias","Picea abies","(at4g33300 : 285.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 570.0) & (original description: no original description)","protein_coding" "MA_18706g0010","No alias","Picea abies","(at3g27200 : 84.7) Cupredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: uclacyanin 1 (TAIR:AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species: Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)","protein_coding" "MA_1896487g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_198247g0010","No alias","Picea abies","(at4g21390 : 237.0) B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink). & (q8l4h4|nork_medtr : 145.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 474.0) & (original description: no original description)","protein_coding" "MA_265873g0010","No alias","Picea abies","(at1g66920 : 277.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 164.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 530.0) & (original description: no original description)","protein_coding" "MA_366599g0010","No alias","Picea abies","(at1g23460 : 130.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1); Has 4300 Blast hits to 4283 proteins in 531 species: Archae - 4; Bacteria - 1235; Metazoa - 14; Fungi - 1418; Plants - 1493; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (p35336|pglr_actch : 110.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 260.0) & (original description: no original description)","protein_coding" "MA_400106g0010","No alias","Picea abies","(at1g29520 : 123.0) AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)","protein_coding" "MA_413510g0010","No alias","Picea abies","(at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)","protein_coding" "MA_7882351g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_8590327g0010","No alias","Picea abies","(at3g28380 : 220.0) P-glycoprotein 17 (PGP17); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 18 (TAIR:AT3G28390.1); Has 843041 Blast hits to 392204 proteins in 4166 species: Archae - 14548; Bacteria - 659973; Metazoa - 17582; Fungi - 11884; Plants - 9780; Viruses - 43; Other Eukaryotes - 129231 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 210.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 440.0) & (original description: no original description)","protein_coding" "MA_91618g0010","No alias","Picea abies","(at2g41890 : 523.0) curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein; FUNCTIONS IN: sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 27641 Blast hits to 27042 proteins in 566 species: Archae - 0; Bacteria - 139; Metazoa - 3969; Fungi - 187; Plants - 22616; Viruses - 64; Other Eukaryotes - 666 (source: NCBI BLink). & (p17801|kpro_maize : 268.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1046.0) & (original description: no original description)","protein_coding" "MA_9373163g0010","No alias","Picea abies","(at1g20160 : 579.0) ATSBT5.2; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1158.0) & (original description: no original description)","protein_coding" "MA_947116g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_9490863g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_9987828g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "Mp1g09250.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g26110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g23140.1","No alias","Marchantia polymorpha","ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana (sp|q0wuc5|alb33_arath : 197.0)","protein_coding" "Mp3g14210.1","No alias","Marchantia polymorpha","GLE1 scaffold nucleoporin of nuclear pore complex","protein_coding" "Mp6g03190.1","No alias","Marchantia polymorpha","replication fork tethering component POLA2 of DNA polymerase alpha complex","protein_coding" "Mp6g17320.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Potri.008G183500","No alias","Populus trichocarpa","embryo defective 1745","protein_coding" "Pp1s100_126V6","No alias","Physcomitrella patens","sugar transporter family protein","protein_coding" "Pp1s130_296V6","No alias","Physcomitrella patens","F14F18.130; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s13_387V6","No alias","Physcomitrella patens","pii protein","protein_coding" "Pp1s152_136V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s156_65V6","No alias","Physcomitrella patens","atp binding","protein_coding" "Pp1s15_227V6","No alias","Physcomitrella patens","3-demethylubiquinone-9 3-methyltransferase","protein_coding" "Pp1s173_67V6","No alias","Physcomitrella patens","possible metal-binding domain in rnase l rli family expressed","protein_coding" "Pp1s197_21V6","No alias","Physcomitrella patens","udp-n-acetylglucosamine transferase subunit alg14 homolog","protein_coding" "Pp1s19_190V6","No alias","Physcomitrella patens","Hypothetical protein T28C6.1 [Caenorhabditis elegans]","protein_coding" "Pp1s20_16V6","No alias","Physcomitrella patens","gdp dissociation inhibitor","protein_coding" "Pp1s241_44V6","No alias","Physcomitrella patens","respiratory burst","protein_coding" "Pp1s314_51V6","No alias","Physcomitrella patens","protein binding","protein_coding" "Pp1s316_12V6","No alias","Physcomitrella patens","gle1 rna export mediator-like","protein_coding" "Pp1s34_210V6","No alias","Physcomitrella patens","ribonuclease ii","protein_coding" "Pp1s364_42V6","No alias","Physcomitrella patens","transcription factor e2f","protein_coding" "Pp1s391_28V6","No alias","Physcomitrella patens","gen homolog endonuclease","protein_coding" "Pp1s3_119V6","No alias","Physcomitrella patens","xfb2 gene for F-box protein XFB2","protein_coding" "Pp1s55_203V6","No alias","Physcomitrella patens","vitamin k epoxide reductase","protein_coding" "Pp1s5_383V6","No alias","Physcomitrella patens","adenosine kinase","protein_coding" "Pp1s67_165V6","No alias","Physcomitrella patens","F14F8.90; F-box protein family [Arabidopsis thaliana]","protein_coding" "Pp1s6_341V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s83_237V6","No alias","Physcomitrella patens","cs061 protein","protein_coding" "Pp1s91_57V6","No alias","Physcomitrella patens","nudix hydrolase","protein_coding" "PSME_00000033-RA","No alias","Pseudotsuga menziesii","(at4g29510 : 296.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)","protein_coding" "PSME_00000783-RA","No alias","Pseudotsuga menziesii","(q42967|dcup_tobac : 455.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 439.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 878.0) & (original description: no original description)","protein_coding" "PSME_00000953-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 168.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description)","protein_coding" "PSME_00001334-RA","No alias","Pseudotsuga menziesii","(at1g64060 : 808.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 1616.0) & (original description: no original description)","protein_coding" "PSME_00002193-RA","No alias","Pseudotsuga menziesii","(at2g20560 : 379.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (q04960|dnjh_cucsa : 166.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 758.0) & (original description: no original description)","protein_coding" "PSME_00002414-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding" "PSME_00003116-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00003130-RA","No alias","Pseudotsuga menziesii","(at5g43830 : 290.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p24805|tsjt1_tobac : 128.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 580.0) & (original description: no original description)","protein_coding" "PSME_00003493-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 348.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lkz1|nork_pea : 187.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 696.0) & (original description: no original description)","protein_coding" "PSME_00004775-RA","No alias","Pseudotsuga menziesii","(q9sec2|msra_lacsa : 290.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (at5g07470 : 287.0) ubiquitous enzyme that repairs oxidatively damaged proteins; peptidemethionine sulfoxide reductase 3 (PMSR3); CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description)","protein_coding" "PSME_00004790-RA","No alias","Pseudotsuga menziesii","(at3g47550 : 182.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "PSME_00004856-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 558.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1116.0) & (original description: no original description)","protein_coding" "PSME_00005728-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 421.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 219.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 842.0) & (original description: no original description)","protein_coding" "PSME_00007641-RA","No alias","Pseudotsuga menziesii","(at2g41790 : 105.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "PSME_00007962-RA","No alias","Pseudotsuga menziesii","(at1g68010 : 263.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (p13443|dhgy_cucsa : 259.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 526.0) & (original description: no original description)","protein_coding" "PSME_00008089-RA","No alias","Pseudotsuga menziesii","(p10053|rbs_pinth : 208.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (at1g67090 : 198.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description)","protein_coding" "PSME_00008310-RA","No alias","Pseudotsuga menziesii","(at5g45130 : 120.0) small GTP binding protein; RAB homolog 1 (RHA1); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT4G19640.1); Has 26267 Blast hits to 26237 proteins in 716 species: Archae - 26; Bacteria - 136; Metazoa - 13722; Fungi - 3681; Plants - 2979; Viruses - 20; Other Eukaryotes - 5703 (source: NCBI BLink). & (p31583|rhn1_nicpl : 120.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 240.0) & (original description: no original description)","protein_coding" "PSME_00011679-RA","No alias","Pseudotsuga menziesii","(at5g54290 : 179.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 358.0) & (original description: no original description)","protein_coding" "PSME_00011924-RA","No alias","Pseudotsuga menziesii","(at1g13120 : 107.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "PSME_00012557-RA","No alias","Pseudotsuga menziesii","(at2g43940 : 243.0) HARMLESS TO OZONE LAYER 3 (HOL3); FUNCTIONS IN: methyltransferase activity, thiopurine S-methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Thiopurine S-methyltransferase (InterPro:IPR008854); BEST Arabidopsis thaliana protein match is: HARMLESS TO OZONE LAYER 1 (TAIR:AT2G43910.1); Has 1908 Blast hits to 1904 proteins in 625 species: Archae - 27; Bacteria - 1474; Metazoa - 21; Fungi - 109; Plants - 87; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)","protein_coding" "PSME_00012913-RA","No alias","Pseudotsuga menziesii","(at5g66460 : 172.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)","protein_coding" "PSME_00013115-RA","No alias","Pseudotsuga menziesii","(p31110|tlp_orysa : 205.0) Thaumatin-like protein precursor - Oryza sativa (Rice) & (at4g11650 : 152.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "PSME_00013827-RA","No alias","Pseudotsuga menziesii","(q06942|fl3h_maldo : 284.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (at3g51240 : 259.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (reliability: 518.0) & (original description: no original description)","protein_coding" "PSME_00014468-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00020528-RA","No alias","Pseudotsuga menziesii","(at1g22280 : 369.0) Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.; phytochrome-associated protein phosphatase type 2C (PAPP2C); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G34750.1). & (reliability: 738.0) & (original description: no original description)","protein_coding" "PSME_00020615-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 265.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 194.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 490.0) & (original description: no original description)","protein_coding" "PSME_00020807-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 337.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 214.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 664.0) & (original description: no original description)","protein_coding" "PSME_00021354-RA","No alias","Pseudotsuga menziesii",""(at5g36110 : 431.0) member of CYP716A; ""cytochrome P450, family 716, subfamily A, polypeptide 1"" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 234.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 862.0) & (original description: no original description)"","protein_coding" "PSME_00022410-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00022412-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00023522-RA","No alias","Pseudotsuga menziesii","(at1g29860 : 99.4) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description)","protein_coding" "PSME_00023945-RA","No alias","Pseudotsuga menziesii","(at1g22100 : 178.0) Inositol-pentakisphosphate 2-kinase family protein; FUNCTIONS IN: inositol pentakisphosphate 2-kinase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G59312.1); Has 235 Blast hits to 231 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 18; Plants - 92; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)","protein_coding" "PSME_00024717-RA","No alias","Pseudotsuga menziesii","(at1g49100 : 440.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G21340.1); Has 161236 Blast hits to 124165 proteins in 4737 species: Archae - 101; Bacteria - 13580; Metazoa - 45256; Fungi - 10232; Plants - 72553; Viruses - 452; Other Eukaryotes - 19062 (source: NCBI BLink). & (q8lkz1|nork_pea : 361.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 842.0) & (original description: no original description)","protein_coding" "PSME_00024872-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00025146-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00025743-RA","No alias","Pseudotsuga menziesii","(at3g60580 : 103.0) C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)","protein_coding" "PSME_00025898-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 2125.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4250.0) & (original description: no original description)","protein_coding" "PSME_00026136-RA","No alias","Pseudotsuga menziesii",""(at2g47460 : 219.0) ""MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. "" The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots.; myb domain protein 12 (MYB12); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 11 (TAIR:AT3G62610.1); Has 8833 Blast hits to 8133 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 786; Fungi - 423; Plants - 5965; Viruses - 6; Other Eukaryotes - 1653 (source: NCBI BLink). & (p27898|mybp_maize : 213.0) Myb-related protein P - Zea mays (Maize) & (reliability: 438.0) & (original description: no original description)"","protein_coding" "PSME_00026674-RA","No alias","Pseudotsuga menziesii","(at2g25810 : 272.0) tonoplast intrinsic protein 4;1 (TIP4;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, membrane, central vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10430 Blast hits to 10407 proteins in 2161 species: Archae - 84; Bacteria - 4945; Metazoa - 1471; Fungi - 406; Plants - 2499; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink). & (p33560|tip_antma : 258.0) Probable aquaporin TIP-type (Tonoplast intrinsic protein DiP) (Dark intrinsic protein) - Antirrhinum majus (Garden snapdragon) & (reliability: 544.0) & (original description: no original description)","protein_coding" "PSME_00026707-RA","No alias","Pseudotsuga menziesii","(at4g36470 : 257.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9fyz9|bamt_antma : 232.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 496.0) & (original description: no original description)","protein_coding" "PSME_00026708-RA","No alias","Pseudotsuga menziesii","(at4g36470 : 259.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9fyz9|bamt_antma : 234.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 492.0) & (original description: no original description)","protein_coding" "PSME_00028656-RA","No alias","Pseudotsuga menziesii","(at1g66920 : 211.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 157.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 408.0) & (original description: no original description)","protein_coding" "PSME_00028689-RA","No alias","Pseudotsuga menziesii","(at4g34270 : 171.0) TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)","protein_coding" "PSME_00029764-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 540.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 1080.0) & (original description: no original description)","protein_coding" "PSME_00030176-RA","No alias","Pseudotsuga menziesii","(at1g02150 : 296.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)","protein_coding" "PSME_00030428-RA","No alias","Pseudotsuga menziesii","(at1g06900 : 194.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT2G41790.1); Has 36039 Blast hits to 19499 proteins in 2240 species: Archae - 83; Bacteria - 7236; Metazoa - 10750; Fungi - 4343; Plants - 1987; Viruses - 664; Other Eukaryotes - 10976 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "PSME_00030878-RA","No alias","Pseudotsuga menziesii","(at5g48900 : 447.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40973|pel_lillo : 337.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 894.0) & (original description: no original description)","protein_coding" "PSME_00031090-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 276.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 180.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 536.0) & (original description: no original description)","protein_coding" "PSME_00031495-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 387.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52579|ifrh_tobac : 375.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 774.0) & (original description: no original description)","protein_coding" "PSME_00033748-RA","No alias","Pseudotsuga menziesii","(at5g66460 : 455.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 910.0) & (original description: no original description)","protein_coding" "PSME_00033955-RA","No alias","Pseudotsuga menziesii","(at1g50650 : 95.1) Stigma-specific Stig1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Stigma-specific protein Stig1 (InterPro:IPR006969); BEST Arabidopsis thaliana protein match is: Stigma-specific Stig1 family protein (TAIR:AT1G50720.1); Has 352 Blast hits to 217 proteins in 35 species: Archae - 0; Bacteria - 144; Metazoa - 3; Fungi - 38; Plants - 161; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)","protein_coding" "PSME_00034812-RA","No alias","Pseudotsuga menziesii","(at4g02570 : 308.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (reliability: 616.0) & (original description: no original description)","protein_coding" "PSME_00036179-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00036287-RA","No alias","Pseudotsuga menziesii","(at1g02065 : 120.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o04003|lg1_maize : 112.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 240.0) & (original description: no original description)","protein_coding" "PSME_00036731-RA","No alias","Pseudotsuga menziesii","(at1g14700 : 279.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description)","protein_coding" "PSME_00037073-RA","No alias","Pseudotsuga menziesii","(at2g17260 : 246.0) Encodes a glutamate receptor. Involved in calcium-programmed stomatal closure.; glutamate receptor 2 (GLR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, stomatal movement; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT4G35290.1); Has 6275 Blast hits to 6137 proteins in 506 species: Archae - 28; Bacteria - 848; Metazoa - 4591; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (q7xp59|glr31_orysa : 230.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: no original description)","protein_coding" "PSME_00037346-RA","No alias","Pseudotsuga menziesii","(at5g55250 : 140.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 122.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 280.0) & (original description: no original description)","protein_coding" "PSME_00037850-RA","No alias","Pseudotsuga menziesii","(at2g28660 : 97.1) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Copper chaperone, chloroplast-targeted, predicted (InterPro:IPR016578); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1); Has 1827 Blast hits to 1203 proteins in 102 species: Archae - 0; Bacteria - 68; Metazoa - 145; Fungi - 15; Plants - 1082; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description)","protein_coding" "PSME_00039847-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00041024-RA","No alias","Pseudotsuga menziesii","(at5g65760 : 111.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "PSME_00041192-RA","No alias","Pseudotsuga menziesii","(at5g17210 : 111.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "PSME_00042580-RA","No alias","Pseudotsuga menziesii","(at3g01480 : 125.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49939|tlp40_spiol : 119.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 250.0) & (original description: no original description)","protein_coding" "PSME_00042993-RA","No alias","Pseudotsuga menziesii","(at5g54160 : 82.8) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28002|comt1_medsa : 81.3) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (reliability: 165.6) & (original description: no original description)","protein_coding" "PSME_00043943-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 139.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "PSME_00044714-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00044895-RA","No alias","Pseudotsuga menziesii","(at5g17660 : 207.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description)","protein_coding" "PSME_00046418-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 279.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description)","protein_coding" "PSME_00046555-RA","No alias","Pseudotsuga menziesii","(at4g24780 : 518.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 378.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1036.0) & (original description: no original description)","protein_coding" "PSME_00047465-RA","No alias","Pseudotsuga menziesii","(at3g50950 : 254.0) HOPZ-ACTIVATED RESISTANCE 1 (ZAR1); FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43470.2); Has 15477 Blast hits to 13963 proteins in 472 species: Archae - 2; Bacteria - 362; Metazoa - 212; Fungi - 129; Plants - 14652; Viruses - 8; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description)","protein_coding" "PSME_00049195-RA","No alias","Pseudotsuga menziesii","(at1g66920 : 261.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 148.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 522.0) & (original description: no original description)","protein_coding" "PSME_00050359-RA","No alias","Pseudotsuga menziesii","(at2g39890 : 131.0) Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.; proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)","protein_coding" "PSME_00050455-RA","No alias","Pseudotsuga menziesii","(at1g13120 : 110.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "PSME_00050658-RA","No alias","Pseudotsuga menziesii","(at3g08710 : 153.0) Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication.; thioredoxin H-type 9 (TH9); INVOLVED IN: cell communication; LOCATED IN: cytosol, nucleus, plasma membrane, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G56420.1); Has 16223 Blast hits to 16135 proteins in 2903 species: Archae - 224; Bacteria - 9339; Metazoa - 1540; Fungi - 676; Plants - 1413; Viruses - 3; Other Eukaryotes - 3028 (source: NCBI BLink). & (p29449|trxh1_tobac : 129.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (reliability: 306.0) & (original description: no original description)","protein_coding" "PSME_00052280-RA","No alias","Pseudotsuga menziesii","(at2g39450 : 310.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn2+ and Cu2+ tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (reliability: 620.0) & (original description: no original description)","protein_coding" "PSME_00054199-RA","No alias","Pseudotsuga menziesii","(at5g61820 : 281.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "PSME_00054297-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00055818-RA","No alias","Pseudotsuga menziesii","(at1g75250 : 88.6) RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 591 Blast hits to 590 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description)","protein_coding" "PSME_00056928-RA","No alias","Pseudotsuga menziesii","(p13240|dr206_pea : 226.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (at1g64160 : 182.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: petal, hypocotyl, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G23690.1); Has 792 Blast hits to 791 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 792; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "Seita.1G170900.1","No alias","Setaria italica ","telomeric dsDNA-binding protein","protein_coding" "Seita.1G219000.1","No alias","Setaria italica ","regulatory protein *(GLE1) of LOS4 helicase","protein_coding" "Seita.2G031000.1","No alias","Setaria italica ","component *(NOT9) of mRNA deadenylation CCR4-NOT complex","protein_coding" "Seita.2G111000.1","No alias","Setaria italica ","spermidine synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Seita.2G131700.1","No alias","Setaria italica ","sterol delta14 reductase & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding" "Seita.2G381400.1","No alias","Setaria italica ","LRR-XV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.4G060400.1","No alias","Setaria italica ","RLCK-XV receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.5G184900.1","No alias","Setaria italica ","protoheme IX farnesyltransferase (COX10) in cytochrome c oxidase assembly","protein_coding" "Seita.5G188200.1","No alias","Setaria italica ","component *(RPP21) of RNA-dependent RNase P complex","protein_coding" "Seita.5G323000.1","No alias","Setaria italica ","regulatory protein *(LARP6) of mRNA quality control","protein_coding" "Seita.5G393900.1","No alias","Setaria italica ","UDP-glucose","protein_coding" "Seita.5G405300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G043400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G079600.1","No alias","Setaria italica ","chaperone component *(ClpC) of chloroplast Clp-type protease complex","protein_coding" "Seita.7G128800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G271800.1","No alias","Setaria italica ","dihydroorotase *(PYR4)","protein_coding" "Seita.8G062900.1","No alias","Setaria italica ","DNA damage checkpoint activation factor *(MEI1)","protein_coding" "Seita.8G091900.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.9G118100.1","No alias","Setaria italica ","threonine dehydratase & EC_4.3 carbon-nitrogen lyase","protein_coding" "Seita.9G291800.1","No alias","Setaria italica ","monoacylglycerol lipase","protein_coding" "Seita.9G317900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Sobic.001G043100.2","No alias","Sorghum bicolor ","regulatory protein *(GLE1) of LOS4 helicase","protein_coding" "Sobic.001G139600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G318800.1","No alias","Sorghum bicolor ","class tau glutathione S-transferase","protein_coding" "Sobic.001G325500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G400601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G445100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G544400.1","No alias","Sorghum bicolor ","Oleosin-type lipid droplet structural protein","protein_coding" "Sobic.002G046150.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G121900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G124100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G133700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G236700.2","No alias","Sorghum bicolor ","regulatory protein *(MPB2C) of plasmodesmata intercellular trafficking","protein_coding" "Sobic.002G238800.1","No alias","Sorghum bicolor ","component *(Magoh) of RNA quality control Exon Junction complex","protein_coding" "Sobic.002G289500.1","No alias","Sorghum bicolor ","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.002G291600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G343800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G020000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G176500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G179700.1","No alias","Sorghum bicolor ","beta-galactosidase *(BGAL7) & EC_3.2 glycosylase","protein_coding" "Sobic.003G286900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G368550.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G191800.1","No alias","Sorghum bicolor ","MYB class-R2R3 subgroup-8 transcription factor","protein_coding" "Sobic.004G202750.1","No alias","Sorghum bicolor ","regulatory protein *(GLE1) of LOS4 helicase","protein_coding" "Sobic.004G210400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G304550.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G317300.1","No alias","Sorghum bicolor ","class XI myosin microfilament-based motor protein","protein_coding" "Sobic.005G105700.1","No alias","Sorghum bicolor ","carotenoid cleavage dioxygenase *(CCD8)","protein_coding" "Sobic.006G022000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G032400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G088400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G016800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G028001.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G036550.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G081701.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G089700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G116150.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G220150.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G178901.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G185000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G005500.1","No alias","Sorghum bicolor ","component *(ADA3) of SAGA transcription co-activator complex","protein_coding" "Sobic.009G087540.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G152300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G170100.1","No alias","Sorghum bicolor ","plant-specific ALOG-type transcription factor","protein_coding" "Sobic.009G179950.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G211500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G218800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.010G229600.1","No alias","Sorghum bicolor ","assembly factor (VMA21) of V-type ATPase complex","protein_coding" "Solyc01g009850","No alias","Solanum lycopersicum","DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* A0A1D1YLP0_9ARAE)","protein_coding" "Solyc01g099860","No alias","Solanum lycopersicum","Serine/threonine-protein phosphatase (AHRD V3.3 *** M1CB27_SOLTU)","protein_coding" "Solyc02g031710","No alias","Solanum lycopersicum","SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** AT3G12920.1)","protein_coding" "Solyc04g008710","No alias","Solanum lycopersicum","tRNA 2-thiocytidine biosynthesis TtcA (AHRD V3.3 *-* A0A0B0N6V1_GOSAR)","protein_coding" "Solyc04g009300","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G57180.1)","protein_coding" "Solyc05g013790","No alias","Solanum lycopersicum","Nucleoporin GLE1 (AHRD V3.3 *** W9RMY7_9ROSA)","protein_coding" "Solyc06g050710","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT5G46400.3)","protein_coding" "Solyc06g051540","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN)","protein_coding" "Solyc08g016170","No alias","Solanum lycopersicum","3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** A0A0V0IG10_SOLCH)","protein_coding" "Solyc08g065230","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc08g082710","No alias","Solanum lycopersicum","Protein ABIL2, putative (AHRD V3.3 *** B9RSD0_RICCO)","protein_coding" "Solyc09g013100","No alias","Solanum lycopersicum","histone-lysine N-methyltransferase ATXR3-like protein (AHRD V3.3 *** AT5G01590.1)","protein_coding" "Solyc09g074180","No alias","Solanum lycopersicum","phytochrome interacting factor 3-like 5 (AHRD V3.3 --* AT2G20180.7)","protein_coding" "Solyc09g090680","No alias","Solanum lycopersicum","Cysteine-rich repeat secretory protein (AHRD V3.3 *** A0A0K9P487_ZOSMR)","protein_coding" "Solyc09g090730","No alias","Solanum lycopersicum","AMT1","protein_coding" "Solyc11g071790","No alias","Solanum lycopersicum","Succinate dehydrogenase subunit 6, mitochondrial (AHRD V3.3 *** SDH6_ARATH)","protein_coding" "Solyc12g015910","No alias","Solanum lycopersicum","SufE-like protein, chloroplastic (AHRD V3.3 *** A0A0B0P063_GOSAR)","protein_coding" "Sopen04g013730","No alias","Solanum pennellii","GLE1-like protein","protein_coding" "Sopen05g008710","No alias","Solanum pennellii","GLE1-like protein","protein_coding"