"sequence_id","alias","species","description","type"
"100293","No alias","Selaginella moellendorffii ","temperature sensing protein-related","protein_coding"
"103517","No alias","Selaginella moellendorffii ","ent-kaurenoic acid hydroxylase 2","protein_coding"
"105971","No alias","Selaginella moellendorffii ","OBP3-responsive gene 1","protein_coding"
"107503","No alias","Selaginella moellendorffii ","heat shock transcription factor A1D","protein_coding"
"114118","No alias","Selaginella moellendorffii ","RAN GTPase activating protein 1","protein_coding"
"11486","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"117448","No alias","Selaginella moellendorffii ","Protein kinase family protein","protein_coding"
"117919","No alias","Selaginella moellendorffii ","hexokinase 2","protein_coding"
"118961","No alias","Selaginella moellendorffii ","Cation efflux family protein","protein_coding"
"121207","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"126936","No alias","Selaginella moellendorffii ","Cytochrome P450 superfamily protein","protein_coding"
"136585","No alias","Selaginella moellendorffii ","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"141539","No alias","Selaginella moellendorffii ","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"142486","No alias","Selaginella moellendorffii ","plant intracellular ras group-related LRR 4","protein_coding"
"142654","No alias","Selaginella moellendorffii ","glutathione S-transferase PHI 9","protein_coding"
"142659","No alias","Selaginella moellendorffii ","ARP protein (REF)","protein_coding"
"144185","No alias","Selaginella moellendorffii ","type one serine/threonine protein phosphatase 4","protein_coding"
"149626","No alias","Selaginella moellendorffii ","D-3-phosphoglycerate dehydrogenase","protein_coding"
"149765","No alias","Selaginella moellendorffii ","Ribosomal protein L10 family protein","protein_coding"
"159100","No alias","Selaginella moellendorffii ","Cytochrome P450 superfamily protein","protein_coding"
"162354","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"163679","No alias","Selaginella moellendorffii ","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"163708","No alias","Selaginella moellendorffii ","Na+/H+ antiporter 6","protein_coding"
"164302","No alias","Selaginella moellendorffii ","MATE efflux family protein","protein_coding"
"164618","No alias","Selaginella moellendorffii ","glutamate decarboxylase","protein_coding"
"165600","No alias","Selaginella moellendorffii ","HXXXD-type acyl-transferase family protein","protein_coding"
"171046","No alias","Selaginella moellendorffii ","dynamin-like protein 6","protein_coding"
"171246","No alias","Selaginella moellendorffii ","Pyruvate kinase family protein","protein_coding"
"172755","No alias","Selaginella moellendorffii ","calmodulin-binding receptor-like cytoplasmic kinase 2","protein_coding"
"174189","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"175502","No alias","Selaginella moellendorffii ","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"177263","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"177978","No alias","Selaginella moellendorffii ","PHD finger protein-related","protein_coding"
"179572","No alias","Selaginella moellendorffii ","cell division cycle 5","protein_coding"
"18312","No alias","Selaginella moellendorffii ","high mobility group B1","protein_coding"
"228264","No alias","Selaginella moellendorffii ","Protein of unknown function, DUF599","protein_coding"
"229071","No alias","Selaginella moellendorffii ","BURP domain-containing protein","protein_coding"
"229182","No alias","Selaginella moellendorffii ","BURP domain-containing protein","protein_coding"
"231525","No alias","Selaginella moellendorffii ","tonoplast monosaccharide transporter2","protein_coding"
"232454","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"233652","No alias","Selaginella moellendorffii ","cell division cycle 5","protein_coding"
"267030","No alias","Selaginella moellendorffii ","regulatory particle AAA-ATPase 2A","protein_coding"
"270705","No alias","Selaginella moellendorffii ","cytochrome c biogenesis protein family","protein_coding"
"271104","No alias","Selaginella moellendorffii ","serine carboxypeptidase-like 22","protein_coding"
"402546","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404409","No alias","Selaginella moellendorffii ","peptide transporter 2","protein_coding"
"408755","No alias","Selaginella moellendorffii ","P-glycoprotein 18","protein_coding"
"409941","No alias","Selaginella moellendorffii ","Plant protein 1589 of unknown function","protein_coding"
"411467","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414587","No alias","Selaginella moellendorffii ","TIFY domain protein 8","protein_coding"
"414663","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414666","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416857","No alias","Selaginella moellendorffii ","Serine carboxypeptidase S28 family protein","protein_coding"
"417803","No alias","Selaginella moellendorffii ","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"421525","No alias","Selaginella moellendorffii ","peroxidase 2","protein_coding"
"429299","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF581)","protein_coding"
"437527","No alias","Selaginella moellendorffii ","Ribosomal protein L16p/L10e family protein","protein_coding"
"437818","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"438080","No alias","Selaginella moellendorffii ","peptide transporter 2","protein_coding"
"439146","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1162)","protein_coding"
"441660","No alias","Selaginella moellendorffii ","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding"
"442088","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"443450","No alias","Selaginella moellendorffii ","rotamase FKBP 1","protein_coding"
"444790","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"445430","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"445668","No alias","Selaginella moellendorffii ","Exostosin family protein","protein_coding"
"446289","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"446995","No alias","Selaginella moellendorffii ","RmlC-like cupins superfamily protein","protein_coding"
"57632","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF579)","protein_coding"
"65804","No alias","Selaginella moellendorffii ","RNA binding","protein_coding"
"69021","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"73844","No alias","Selaginella moellendorffii ","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"76253","No alias","Selaginella moellendorffii ","ubiquitin-protein ligase 1","protein_coding"
"84658","No alias","Selaginella moellendorffii ","histone acetyltransferase of the MYST family 1","protein_coding"
"84921","No alias","Selaginella moellendorffii ","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"85032","No alias","Selaginella moellendorffii ","Melibiase family protein","protein_coding"
"85072","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"90623","No alias","Selaginella moellendorffii ","acyl-CoA oxidase 4","protein_coding"
"90888","No alias","Selaginella moellendorffii ","purple acid phosphatase 15","protein_coding"
"92669","No alias","Selaginella moellendorffii ","carboxypeptidase D, putative","protein_coding"
"96082","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"97239","No alias","Selaginella moellendorffii ","peptide transporter 2","protein_coding"
"97911","No alias","Selaginella moellendorffii ","GTP-binding family protein","protein_coding"
"A4A49_01422","No alias","Nicotiana attenuata","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit","protein_coding"
"A4A49_13401","No alias","Nicotiana attenuata","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit","protein_coding"
"At1g05350","No alias","Arabidopsis thaliana","Ubiquitin-like modifier-activating enzyme 5 [Source:UniProtKB/Swiss-Prot;Acc:O23034]","protein_coding"
"At1g09220","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q680Z7]","protein_coding"
"At1g11930","No alias","Arabidopsis thaliana","Pyridoxal phosphate homeostasis protein [Source:UniProtKB/TrEMBL;Acc:Q944L8]","protein_coding"
"At1g12770","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W4E1]","protein_coding"
"At1g13330","No alias","Arabidopsis thaliana","Homologous-pairing protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FX64]","protein_coding"
"At1g15810","No alias","Arabidopsis thaliana","At1g15810/F7H2_23 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ3]","protein_coding"
"At1g19290","No alias","Arabidopsis thaliana","Putative pentatricopeptide repeat-containing protein At1g19290 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN69]","protein_coding"
"At1g22800","No alias","Arabidopsis thaliana","Putative methyltransferase At1g22800, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80543]","protein_coding"
"At1g74600","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g74600, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA56]","protein_coding"
"At1g76260","No alias","Arabidopsis thaliana","WD repeat-containing protein DWA2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPN9]","protein_coding"
"At1g79080","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A3KPF8]","protein_coding"
"At1g79500","No alias","Arabidopsis thaliana","2-dehydro-3-deoxyphosphooctonate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9AV97]","protein_coding"
"At1g79560","No alias","Arabidopsis thaliana","AT1G79560 protein [Source:UniProtKB/TrEMBL;Acc:B9DHQ6]","protein_coding"
"At2g01720","No alias","Arabidopsis thaliana","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUA0]","protein_coding"
"At2g25650","No alias","Arabidopsis thaliana","GLABROUS1 enhancer-binding protein-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYD2]","protein_coding"
"At2g25830","No alias","Arabidopsis thaliana","Probable transcriptional regulatory protein At2g25830 [Source:UniProtKB/Swiss-Prot;Acc:O82314]","protein_coding"
"At2g25870","No alias","Arabidopsis thaliana","Endoribonuclease YBEY, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Z4]","protein_coding"
"At2g31800","No alias","Arabidopsis thaliana","At2g31800 [Source:UniProtKB/TrEMBL;Acc:Q1JPN7]","protein_coding"
"At2g31890","No alias","Arabidopsis thaliana","RAP domain-containing protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZE7]","protein_coding"
"At2g36580","No alias","Arabidopsis thaliana","Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178VX82]","protein_coding"
"At2g37270","No alias","Arabidopsis thaliana","40S ribosomal protein S5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUT9]","protein_coding"
"At2g38270","No alias","Arabidopsis thaliana","Bifunctional monothiol glutaredoxin-S16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H7F6]","protein_coding"
"At3g01720","No alias","Arabidopsis thaliana","Peptidyl serine alpha-galactosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF9]","protein_coding"
"At3g03630","No alias","Arabidopsis thaliana","Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]","protein_coding"
"At3g07670","No alias","Arabidopsis thaliana","Putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Source:UniProtKB/TrEMBL;Acc:Q9S7D2]","protein_coding"
"At3g08010","No alias","Arabidopsis thaliana","ATAB2 [Source:UniProtKB/TrEMBL;Acc:A0A178V658]","protein_coding"
"At3g12530","No alias","Arabidopsis thaliana","DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7A8]","protein_coding"
"At3g13380","No alias","Arabidopsis thaliana","Receptor-like protein kinase BRI1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJF3]","protein_coding"
"At3g14120","No alias","Arabidopsis thaliana","Nuclear pore complex protein NUP107 [Source:UniProtKB/Swiss-Prot;Acc:Q8L748]","protein_coding"
"At3g46790","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STF3]","protein_coding"
"At3g52640","No alias","Arabidopsis thaliana","Zn-dependent exopeptidases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J819]","protein_coding"
"At3g60160","No alias","Arabidopsis thaliana","ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]","protein_coding"
"At4g33500","No alias","Arabidopsis thaliana","Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]","protein_coding"
"At4g33760","No alias","Arabidopsis thaliana","Aspartate--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JJT9]","protein_coding"
"At5g01230","No alias","Arabidopsis thaliana","Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:Q8GUN8]","protein_coding"
"At5g62050","No alias","Arabidopsis thaliana","Mitochondrial inner membrane protein OXA1 [Source:UniProtKB/Swiss-Prot;Acc:Q42191]","protein_coding"
"At5g63840","No alias","Arabidopsis thaliana","Glycosyl hydrolases family 31  protein [Source:TAIR;Acc:AT5G63840]","protein_coding"
"At5g66680","No alias","Arabidopsis thaliana","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q944K2]","protein_coding"
"Bradi1g02940","No alias","Brachypodium distachyon","calreticulin 1a","protein_coding"
"Bradi1g07400","No alias","Brachypodium distachyon","D-3-phosphoglycerate dehydrogenase","protein_coding"
"Bradi1g09680","No alias","Brachypodium distachyon","endoplasmic reticulum oxidoreductins 1","protein_coding"
"Bradi1g18800","No alias","Brachypodium distachyon","Glycosyl transferase family 4 protein","protein_coding"
"Bradi1g30130","No alias","Brachypodium distachyon","Chaperone protein htpG family protein","protein_coding"
"Bradi1g37070","No alias","Brachypodium distachyon","UDP-galactose transporter 3","protein_coding"
"Bradi1g43120","No alias","Brachypodium distachyon","decoy","protein_coding"
"Bradi1g45370","No alias","Brachypodium distachyon","glutaredoxin-related","protein_coding"
"Bradi1g48440","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi1g50810","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g51807","No alias","Brachypodium distachyon","cation-chloride co-transporter 1","protein_coding"
"Bradi1g52650","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g54200","No alias","Brachypodium distachyon","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Bradi1g61040","No alias","Brachypodium distachyon","HSP20-like chaperones superfamily protein","protein_coding"
"Bradi1g67790","No alias","Brachypodium distachyon","chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative","protein_coding"
"Bradi1g68750","No alias","Brachypodium distachyon","Endomembrane protein 70 protein family","protein_coding"
"Bradi1g70160","No alias","Brachypodium distachyon","SecY protein transport family protein","protein_coding"
"Bradi2g01430","No alias","Brachypodium distachyon","calnexin 1","protein_coding"
"Bradi2g01440","No alias","Brachypodium distachyon","calnexin 1","protein_coding"
"Bradi2g10910","No alias","Brachypodium distachyon","Coatomer, beta subunit","protein_coding"
"Bradi2g19400","No alias","Brachypodium distachyon","hexokinase 1","protein_coding"
"Bradi2g19510","No alias","Brachypodium distachyon","staurosporin and temperature sensitive 3-like A","protein_coding"
"Bradi2g19572","No alias","Brachypodium distachyon","AAA-type ATPase family protein","protein_coding"
"Bradi2g27080","No alias","Brachypodium distachyon","Peptidase S24/S26A/S26B/S26C family protein","protein_coding"
"Bradi2g33360","No alias","Brachypodium distachyon","DERLIN-1","protein_coding"
"Bradi2g34950","No alias","Brachypodium distachyon","DNAJ heat shock family protein","protein_coding"
"Bradi2g45070","No alias","Brachypodium distachyon","Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding"
"Bradi2g62730","No alias","Brachypodium distachyon","homolog of mamallian P58IPK","protein_coding"
"Bradi3g01590","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g05490","No alias","Brachypodium distachyon","aldehyde dehydrogenase 5F1","protein_coding"
"Bradi3g11120","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g14790","No alias","Brachypodium distachyon","PapD-like superfamily protein","protein_coding"
"Bradi3g21710","No alias","Brachypodium distachyon","golgi nucleotide sugar transporter 4","protein_coding"
"Bradi3g30790","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi3g47157","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g48760","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi3g51730","No alias","Brachypodium distachyon","Peptidase family M48 family protein","protein_coding"
"Bradi3g53100","No alias","Brachypodium distachyon","heat shock protein 70 (Hsp 70) family protein","protein_coding"
"Bradi3g56610","No alias","Brachypodium distachyon","Endomembrane protein 70 protein family","protein_coding"
"Bradi4g08907","No alias","Brachypodium distachyon","hydrolases, acting on ester bonds","protein_coding"
"Bradi4g13720","No alias","Brachypodium distachyon","DNA binding;DNA-directed RNA polymerases","protein_coding"
"Bradi4g23180","No alias","Brachypodium distachyon","PDI-like 1-1","protein_coding"
"Bradi4g35087","No alias","Brachypodium distachyon","FAD-dependent oxidoreductase family protein","protein_coding"
"Bradi4g40517","No alias","Brachypodium distachyon","XS domain-containing protein / XS zinc finger domain-containing protein-related","protein_coding"
"Bradi4g40990","No alias","Brachypodium distachyon","leucine-rich repeat transmembrane protein kinase family protein","protein_coding"
"Bradi4g43730","No alias","Brachypodium distachyon","Nucleotide-sugar transporter family protein","protein_coding"
"Brara.A00478.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00919.1","No alias","Brassica rapa","AHL clade-B transcription factor","protein_coding"
"Brara.A01049.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02078.1","No alias","Brassica rapa","primexine deposition factor *(NPU)","protein_coding"
"Brara.A02147.1","No alias","Brassica rapa","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A02206.1","No alias","Brassica rapa","component *(p24-delta) of GPI-anchor protein cargo receptor complex","protein_coding"
"Brara.A02227.1","No alias","Brassica rapa","SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex","protein_coding"
"Brara.A02503.1","No alias","Brassica rapa","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A02512.1","No alias","Brassica rapa","component *(CPSF73/Ysh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & nuclease CPSF73-I","protein_coding"
"Brara.A02551.1","No alias","Brassica rapa","regulatory E3 ubiquitin ligase *(CSU1) of COP1 activity","protein_coding"
"Brara.A03558.1","No alias","Brassica rapa","component *(MUN/SPC24) of NDC80 outer kinetochore complex","protein_coding"
"Brara.B00490.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding"
"Brara.B00503.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01156.1","No alias","Brassica rapa","regulatory component *(RPT3) of 26S proteasome","protein_coding"
"Brara.B01526.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01569.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02694.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03136.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03556.1","No alias","Brassica rapa","component *(eL22) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.B03745.1","No alias","Brassica rapa","class-II histone deacetylase","protein_coding"
"Brara.C00239.1","No alias","Brassica rapa","component *(SF3A3) of splicing factor 3A complex","protein_coding"
"Brara.C00613.1","No alias","Brassica rapa","LRR-VI-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C01407.1","No alias","Brassica rapa","RNA splicing factor *(PTB)","protein_coding"
"Brara.C01553.1","No alias","Brassica rapa","transcriptional co-regulator *(OFP)","protein_coding"
"Brara.C02243.1","No alias","Brassica rapa","component *(uL2m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.C02365.1","No alias","Brassica rapa","rRNA adenosine dimethylase *(DIM1A)","protein_coding"
"Brara.C03087.1","No alias","Brassica rapa","acyl carrier protein *(ptACP))","protein_coding"
"Brara.C03203.1","No alias","Brassica rapa","1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase","protein_coding"
"Brara.C03360.1","No alias","Brassica rapa","nucleotide sugar transporter *(UUAT)","protein_coding"
"Brara.C03416.1","No alias","Brassica rapa","component *(PSF2) of GINS DNA replication fork maintenance complex","protein_coding"
"Brara.C03509.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03545.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04021.1","No alias","Brassica rapa","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"Brara.C04453.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00303.1","No alias","Brassica rapa","UDP-N-acetylglucosamine-phosphate transferase *(ALG7)","protein_coding"
"Brara.D00706.1","No alias","Brassica rapa","MyoB class-IIIb myosin receptor","protein_coding"
"Brara.D00740.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00785.1","No alias","Brassica rapa","manganese/calcium cation transporter *(BICAT)","protein_coding"
"Brara.D01210.1","No alias","Brassica rapa","GRAS-type transcription factor","protein_coding"
"Brara.D01532.1","No alias","Brassica rapa","deubiquitinase","protein_coding"
"Brara.D01691.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01728.1","No alias","Brassica rapa","E3 ubiquitin ligase","protein_coding"
"Brara.D02220.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02705.1","No alias","Brassica rapa","regulatory protein *(CYCP(CYCU) of cell cycle","protein_coding"
"Brara.E00850.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01260.1","No alias","Brassica rapa","GSK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E01476.1","No alias","Brassica rapa","beta-1,3-galactosyltransferase *(B3GALT)","protein_coding"
"Brara.E01872.1","No alias","Brassica rapa","E2 ubiquitin-conjugating enzyme *(UBC15)","protein_coding"
"Brara.E02199.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02258.1","No alias","Brassica rapa","mitochondrial RNA pseudouridine synthase *(PUS3/4)","protein_coding"
"Brara.E02600.1","No alias","Brassica rapa","choline transporter *(CHER/CTL1)","protein_coding"
"Brara.E02738.1","No alias","Brassica rapa","cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2 glycosylase","protein_coding"
"Brara.E02914.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02953.1","No alias","Brassica rapa","methylation reader Alfin of PRC1 complex","protein_coding"
"Brara.E03230.1","No alias","Brassica rapa","component *(PIG-S) of GPI transamidase complex","protein_coding"
"Brara.E03282.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00058.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00296.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00591.1","No alias","Brassica rapa","component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex","protein_coding"
"Brara.F00802.1","No alias","Brassica rapa","galacturonosyltransferase","protein_coding"
"Brara.F01533.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01567.1","No alias","Brassica rapa","oxoguanine DNA glycosylase *(OGG1)","protein_coding"
"Brara.F01614.1","No alias","Brassica rapa","component *(DMS3) of DNA methylation accessory complex","protein_coding"
"Brara.F01654.1","No alias","Brassica rapa","sugar efflux transporter *(SWEET)","protein_coding"
"Brara.F01806.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02573.1","No alias","Brassica rapa","component *(PFD5) of Prefoldin co-chaperone complex","protein_coding"
"Brara.F02847.1","No alias","Brassica rapa","component *(RFC3) of PCNA sliding clamp loader complex","protein_coding"
"Brara.F02940.1","No alias","Brassica rapa","transcription factor *(A/B-GATA)","protein_coding"
"Brara.F03121.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03516.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00026.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00315.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01102.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01239.1","No alias","Brassica rapa","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"Brara.G02100.1","No alias","Brassica rapa","component *(NQO9/TYKY) of NADH dehydrogenase electron output (module Q)","protein_coding"
"Brara.G02120.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02176.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02298.1","No alias","Brassica rapa","component *(ESP1) of Cleavage Stimulatory Factor (CstF) complex","protein_coding"
"Brara.G03048.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03211.1","No alias","Brassica rapa","component *(eL6) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G03262.1","No alias","Brassica rapa","DYRK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G03365.1","No alias","Brassica rapa","LRR-VII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H00192.1","No alias","Brassica rapa","transcriptional repressor *(IAA/AUX)","protein_coding"
"Brara.H00357.1","No alias","Brassica rapa","accessory component *(RHL1) of meiotic topoisomerase-VI complex","protein_coding"
"Brara.H00546.1","No alias","Brassica rapa","serine decarboxylase","protein_coding"
"Brara.H00569.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00588.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00650.1","No alias","Brassica rapa","TruA-type tRNA pseudouridine synthase","protein_coding"
"Brara.H01017.1","No alias","Brassica rapa","ribosome recycling factor *(RLI/ABCE)","protein_coding"
"Brara.H01074.1","No alias","Brassica rapa","adrenodoxin of mitochondrial ISC system assembly phase","protein_coding"
"Brara.H01105.1","No alias","Brassica rapa","component *(SHL/EBS) of PRC1 complex","protein_coding"
"Brara.H02124.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02128.1","No alias","Brassica rapa","ceramide synthase","protein_coding"
"Brara.H02386.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00035.1","No alias","Brassica rapa","component *(NDUFC1/KFYI) of NADH dehydrogenase complex","protein_coding"
"Brara.I00388.1","No alias","Brassica rapa","component *(LSm5) of U6-associated LSm accessory ribonucleoprotein complex","protein_coding"
"Brara.I00462.1","No alias","Brassica rapa","regulatory protein *(CYCH) of cell cycle & regulatory subunit *(CYCH) of CAK kinase module & regulatory component *(CYCH) of CAK kinase module","protein_coding"
"Brara.I00892.1","No alias","Brassica rapa","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"Brara.I01365.1","No alias","Brassica rapa","GDP1 LSU processome maturation factor","protein_coding"
"Brara.I01679.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01794.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01917.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03322.1","No alias","Brassica rapa","regulatory protein *(CYCD) of cell cycle","protein_coding"
"Brara.I03888.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04447.1","No alias","Brassica rapa","component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex","protein_coding"
"Brara.J00450.1","No alias","Brassica rapa","fission factor *(PMD) & lysine-rich arabinogalactan protein","protein_coding"
"Brara.J00463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00967.1","No alias","Brassica rapa","component *(uL30m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.J01068.1","No alias","Brassica rapa","subunit beta of class-II glucosidase II complex","protein_coding"
"Brara.J01663.1","No alias","Brassica rapa","rhamnogalacturonan-I O-acetyltransferase *(TBL)","protein_coding"
"Brara.J01893.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02916.1","No alias","Brassica rapa","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Brara.K00292.1","No alias","Brassica rapa","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"Brara.K00881.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01876.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g001100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g018050","No alias","Chlamydomonas reinhardtii","no exine formation 1","protein_coding"
"Cre01.g033550","No alias","Chlamydomonas reinhardtii","thioredoxin family protein","protein_coding"
"Cre01.g037650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g076500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g078000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g088200","No alias","Chlamydomonas reinhardtii","PDI-like 1-4","protein_coding"
"Cre02.g097650","No alias","Chlamydomonas reinhardtii","non-ATPase subunit 9","protein_coding"
"Cre02.g102450","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre02.g104350","No alias","Chlamydomonas reinhardtii","PDI-like 5-4","protein_coding"
"Cre02.g108400","No alias","Chlamydomonas reinhardtii","Defender against death (DAD family) protein","protein_coding"
"Cre02.g116000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g141500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g141506","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre03.g145547","No alias","Chlamydomonas reinhardtii","NADH:cytochrome B5 reductase 1","protein_coding"
"Cre03.g150700","No alias","Chlamydomonas reinhardtii","stress-inducible protein, putative","protein_coding"
"Cre03.g152850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g165350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g193700","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre03.g199983","No alias","Chlamydomonas reinhardtii","protein phosphatase 2A-2","protein_coding"
"Cre03.g204100","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre03.g208000","No alias","Chlamydomonas reinhardtii","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Cre03.g208161","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g214502","No alias","Chlamydomonas reinhardtii","UDP-D-glucose/UDP-D-galactose 4-epimerase 5","protein_coding"
"Cre04.g218450","No alias","Chlamydomonas reinhardtii","elongation defective 1 protein / ELD1 protein","protein_coding"
"Cre05.g233303","No alias","Chlamydomonas reinhardtii","UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups","protein_coding"
"Cre05.g234300","No alias","Chlamydomonas reinhardtii","26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain","protein_coding"
"Cre05.g241640","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g241850","No alias","Chlamydomonas reinhardtii","ATP-citrate lyase A-1","protein_coding"
"Cre05.g244950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g252850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g258300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g258850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g262300","No alias","Chlamydomonas reinhardtii","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Cre06.g267500","No alias","Chlamydomonas reinhardtii","20S proteasome beta subunit C2","protein_coding"
"Cre06.g278185","No alias","Chlamydomonas reinhardtii","UDP-glucose dehydrogenase 1","protein_coding"
"Cre06.g284900","No alias","Chlamydomonas reinhardtii","cyclophilin 5","protein_coding"
"Cre06.g296983","No alias","Chlamydomonas reinhardtii","SUMO-activating enzyme 2","protein_coding"
"Cre06.g302500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g321350","No alias","Chlamydomonas reinhardtii","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"Cre07.g330100","No alias","Chlamydomonas reinhardtii","staurosporin and temperature sensitive 3-like b","protein_coding"
"Cre07.g332500","No alias","Chlamydomonas reinhardtii","xyloglucanase 113","protein_coding"
"Cre07.g356150","No alias","Chlamydomonas reinhardtii","Peptidase family M48 family protein","protein_coding"
"Cre08.g358568","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g368450","No alias","Chlamydomonas reinhardtii","ribophorin II (RPN2) family protein","protein_coding"
"Cre09.g386137","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g386143","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g386650","No alias","Chlamydomonas reinhardtii","ADP/ATP carrier 3","protein_coding"
"Cre09.g390604","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g391282","No alias","Chlamydomonas reinhardtii","beta-1,2-xylosyltransferase","protein_coding"
"Cre09.g392430","No alias","Chlamydomonas reinhardtii","beta-ketoacyl reductase 2","protein_coding"
"Cre09.g398350","No alias","Chlamydomonas reinhardtii","U-box domain-containing protein","protein_coding"
"Cre09.g400960","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g406800","No alias","Chlamydomonas reinhardtii","Peptidase S24/S26A/S26B/S26C family protein","protein_coding"
"Cre09.g408550","No alias","Chlamydomonas reinhardtii","SUMO activating enzyme 1B","protein_coding"
"Cre10.g418100","No alias","Chlamydomonas reinhardtii","20S proteasome alpha subunit C1","protein_coding"
"Cre10.g424400","No alias","Chlamydomonas reinhardtii","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein","protein_coding"
"Cre10.g430250","No alias","Chlamydomonas reinhardtii","Exostosin family protein","protein_coding"
"Cre10.g439850","No alias","Chlamydomonas reinhardtii","transmembrane nine 7","protein_coding"
"Cre10.g443100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g444900","No alias","Chlamydomonas reinhardtii","MATE efflux family protein","protein_coding"
"Cre10.g446700","No alias","Chlamydomonas reinhardtii","Ankyrin repeat family protein with DHHC zinc finger domain","protein_coding"
"Cre10.g455190","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g457600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g478240","No alias","Chlamydomonas reinhardtii","Proteasome component (PCI) domain protein","protein_coding"
"Cre12.g502050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g502450","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre12.g503000","No alias","Chlamydomonas reinhardtii","phosphate starvation-induced gene 3","protein_coding"
"Cre12.g515150","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF543)","protein_coding"
"Cre12.g520450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g521350","No alias","Chlamydomonas reinhardtii","Sec1/munc18-like (SM) proteins superfamily","protein_coding"
"Cre12.g522050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g523300","No alias","Chlamydomonas reinhardtii","Ribophorin I","protein_coding"
"Cre12.g531450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g541800","No alias","Chlamydomonas reinhardtii","Prolyl oligopeptidase family protein","protein_coding"
"Cre12.g557250","No alias","Chlamydomonas reinhardtii","EPS15 homology domain 2","protein_coding"
"Cre13.g562475","No alias","Chlamydomonas reinhardtii","ER lumen protein retaining receptor family protein","protein_coding"
"Cre13.g565850","No alias","Chlamydomonas reinhardtii","Coatomer, alpha subunit","protein_coding"
"Cre13.g571251","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g571750","No alias","Chlamydomonas reinhardtii","stromal cell-derived factor 2-like protein precursor","protein_coding"
"Cre14.g614100","No alias","Chlamydomonas reinhardtii","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Cre14.g619550","No alias","Chlamydomonas reinhardtii","20S proteasome alpha subunit G1","protein_coding"
"Cre14.g620200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g629000","No alias","Chlamydomonas reinhardtii","xyloglucanase 113","protein_coding"
"Cre15.g637282","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g641266","No alias","Chlamydomonas reinhardtii","Nucleotide/sugar transporter family protein","protein_coding"
"Cre16.g672800","No alias","Chlamydomonas reinhardtii","Glucose-1-phosphate adenylyltransferase family protein","protein_coding"
"Cre16.g675602","No alias","Chlamydomonas reinhardtii","Oligosaccharyltransferase complex/magnesium transporter family protein","protein_coding"
"Cre16.g678600","No alias","Chlamydomonas reinhardtii","Glycosyltransferase family 61 protein","protein_coding"
"Cre16.g685400","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre17.g697650","No alias","Chlamydomonas reinhardtii","Prolyl oligopeptidase family protein","protein_coding"
"Cre17.g705400","No alias","Chlamydomonas reinhardtii","proteasome alpha subunit A1","protein_coding"
"Cre17.g706850","No alias","Chlamydomonas reinhardtii","rhomboid protein-related","protein_coding"
"Cre17.g711450","No alias","Chlamydomonas reinhardtii","syntaxin of plants 81","protein_coding"
"Cre17.g715750","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre17.g724350","No alias","Chlamydomonas reinhardtii","20S proteasome alpha subunit E1","protein_coding"
"Cre17.g731750","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 707, subfamily A, polypeptide 3","protein_coding"
"Cre17.g741000","No alias","Chlamydomonas reinhardtii","Translocon-associated protein (TRAP), alpha subunit","protein_coding"
"Cre17.g742300","No alias","Chlamydomonas reinhardtii","glutathione S-transferase PHI 10","protein_coding"
"Cre17.g746997","No alias","Chlamydomonas reinhardtii","aldehyde dehydrogenase 2C4","protein_coding"
"Cre26.g756797","No alias","Chlamydomonas reinhardtii","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein","protein_coding"
"evm.model.contig_2020.29","No alias","Porphyridium purpureum","(at3g07300 : 196.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.64","No alias","Porphyridium purpureum","(at3g26570 : 229.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2034.9","No alias","Porphyridium purpureum","(at5g42970 : 231.0) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.; CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8); FUNCTIONS IN: protein binding; INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis; LOCATED IN: signalosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2043.1","No alias","Porphyridium purpureum","(at5g14460 : 104.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2044.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2044.31","No alias","Porphyridium purpureum","(at1g74910 : 323.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2070.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2070.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2079.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2079.2","No alias","Porphyridium purpureum","(at1g21370 : 243.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF218 (InterPro:IPR003848); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2094.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2102.3","No alias","Porphyridium purpureum","(at3g44850 : 209.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G22840.1); Has 38681 Blast hits to 29843 proteins in 1092 species: Archae - 4; Bacteria - 1517; Metazoa - 15700; Fungi - 7143; Plants - 6601; Viruses - 16; Other Eukaryotes - 7700 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2165.8","No alias","Porphyridium purpureum","(at5g23290 : 81.6) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2180.2","No alias","Porphyridium purpureum","(at2g37790 : 227.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink). & (p28475|s6pd_maldo : 185.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2190.5","No alias","Porphyridium purpureum","(at4g31120 : 317.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2275.1","No alias","Porphyridium purpureum","(at3g54660 : 433.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (p80461|gshrp_tobac : 431.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (reliability: 866.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2279.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2281.8","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2282.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.8","No alias","Porphyridium purpureum","(at1g14240 : 109.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80595|apy_soltu : 109.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2421.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.31","No alias","Porphyridium purpureum","(at1g70480 : 105.0) Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3385.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3385.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.34","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3426.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3427.8","No alias","Porphyridium purpureum","(at4g34450 : 528.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 1056.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3464.2","No alias","Porphyridium purpureum","(at4g17300 : 185.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3468.2","No alias","Porphyridium purpureum","(at3g25230 : 92.8) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family.  It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41649|fkb15_vicfa : 87.4) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_3487.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3491.3","No alias","Porphyridium purpureum","(at4g38220 : 255.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3491.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3661.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3698.1","No alias","Porphyridium purpureum","(at4g33110 : 385.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_439.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.21","No alias","Porphyridium purpureum","(at1g13120 : 102.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_441.27","No alias","Porphyridium purpureum","(at4g31860 : 186.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_441.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4418.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4418.24","No alias","Porphyridium purpureum","(at1g08940 : 156.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4419.3","No alias","Porphyridium purpureum","(at1g27980 : 331.0) dihydrosphingosine phosphate lyase (DPL1); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: sphingolipid catabolic process, cellular amino acid metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 6215 Blast hits to 6205 proteins in 1686 species: Archae - 244; Bacteria - 4383; Metazoa - 292; Fungi - 491; Plants - 296; Viruses - 3; Other Eukaryotes - 506 (source: NCBI BLink). & (q52rg7|sgpl_orysa : 316.0) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4428.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4429.3","No alias","Porphyridium purpureum","(at5g40280 : 192.0) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.; ENHANCED RESPONSE TO ABA 1 (ERA1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 2257 Blast hits to 1610 proteins in 263 species: Archae - 4; Bacteria - 30; Metazoa - 707; Fungi - 630; Plants - 303; Viruses - 4; Other Eukaryotes - 579 (source: NCBI BLink). & (q04903|pftb_pea : 176.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.23","No alias","Porphyridium purpureum","(at3g58750 : 318.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 2 (CSY2); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 3 (TAIR:AT2G42790.1); Has 13448 Blast hits to 13446 proteins in 3190 species: Archae - 173; Bacteria - 8550; Metazoa - 303; Fungi - 319; Plants - 178; Viruses - 0; Other Eukaryotes - 3925 (source: NCBI BLink). & (p49299|cysz_cucma : 314.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.14","No alias","Porphyridium purpureum","(at3g13772 : 464.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein.  Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.  Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_446.7","No alias","Porphyridium purpureum","(at1g34130 : 659.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1318.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4462.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4469.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4501.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4516.1","No alias","Porphyridium purpureum","(at1g79990 : 963.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (p93107|pf20_chlre : 92.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1926.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4516.3","No alias","Porphyridium purpureum","(at5g43940 : 440.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 438.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4543.2","No alias","Porphyridium purpureum","(at5g57300 : 104.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G23360.1). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_456.1","No alias","Porphyridium purpureum","(at2g33040 : 140.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (p26360|atpg3_ipoba : 139.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4619.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_476.3","No alias","Porphyridium purpureum","(at1g73020 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_482.11","No alias","Porphyridium purpureum","(at5g66680 : 223.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_491.2","No alias","Porphyridium purpureum","(at1g67730 : 152.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_508.2","No alias","Porphyridium purpureum","(at1g55090 : 680.0) carbon-nitrogen hydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: nitrogen compound metabolic process, NAD biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), NAD synthase (InterPro:IPR003694), Glutamine-dependent NAD(+) synthetase, GAT domain-containing (InterPro:IPR014445), NAD/GMP synthase (InterPro:IPR022310); Has 5923 Blast hits to 5903 proteins in 2409 species: Archae - 233; Bacteria - 4478; Metazoa - 145; Fungi - 142; Plants - 70; Viruses - 0; Other Eukaryotes - 855 (source: NCBI BLink). & (reliability: 1360.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_558.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_579.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_603.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_667.4","No alias","Porphyridium purpureum","(at2g21250 : 236.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 205.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_681.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_699.9","No alias","Porphyridium purpureum","(q41651|cypb_vicfa : 198.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (at5g13120 : 191.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.43","No alias","Cyanophora paradoxa","(p31251|ube12_wheat : 840.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 820.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 1640.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.109","No alias","Cyanophora paradoxa","(at1g74910 : 242.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 484.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000113.32","No alias","Cyanophora paradoxa","(at1g10510 : 97.4) embryo defective 2004 (emb2004); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 21704 Blast hits to 6781 proteins in 315 species: Archae - 0; Bacteria - 982; Metazoa - 9646; Fungi - 490; Plants - 1111; Viruses - 0; Other Eukaryotes - 9475 (source: NCBI BLink). & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000128.3","No alias","Cyanophora paradoxa","(at5g41770 : 806.0) crooked neck protein, putative / cell cycle protein, putative; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 5514 Blast hits to 2293 proteins in 250 species: Archae - 19; Bacteria - 57; Metazoa - 1995; Fungi - 1739; Plants - 986; Viruses - 0; Other Eukaryotes - 718 (source: NCBI BLink). & (reliability: 1612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.166","No alias","Cyanophora paradoxa","(at3g12380 : 184.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.; actin-related protein 5 (ARP5); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1). & (p02581|act1_soybn : 93.6) Actin-1 - Glycine max (Soybean) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.95","No alias","Cyanophora paradoxa","(at1g34130 : 910.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1820.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.110","No alias","Cyanophora paradoxa","(at5g46210 : 484.0) Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development.  This CUL4-based E3 ligase is essential for the repression of photomorphogenesis.  The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.; cullin4 (CUL4); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 968.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.20","No alias","Cyanophora paradoxa","(at3g03960 : 548.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (p40412|tcpe1_avesa : 187.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1096.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000198.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.11","No alias","Cyanophora paradoxa","(at5g66680 : 405.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000217.35","No alias","Cyanophora paradoxa","(at3g07740 : 94.4) encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1; homolog of yeast ADA2 2A (ADA2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2B (TAIR:AT4G16420.2). & (reliability: 188.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.9","No alias","Cyanophora paradoxa","(at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 183.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000385.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000525.9","No alias","Cyanophora paradoxa","(at1g04200 : 300.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000571.47","No alias","Cyanophora paradoxa","(at1g24510 : 734.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, epsilon subunit (InterPro:IPR012718), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p40412|tcpe1_avesa : 721.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.78","No alias","Cyanophora paradoxa","(at1g29150 : 404.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.79","No alias","Cyanophora paradoxa","(at5g26360 : 697.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p54411|tcpe2_avesa : 295.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1394.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.52","No alias","Cyanophora paradoxa","(at2g32920 : 121.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-3 (PDIL2-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 34824 Blast hits to 18409 proteins in 2879 species: Archae - 382; Bacteria - 17291; Metazoa - 5423; Fungi - 1895; Plants - 2648; Viruses - 40; Other Eukaryotes - 7145 (source: NCBI BLink). & (p38661|pdia6_medsa : 97.4) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000802.47","No alias","Cyanophora paradoxa","(at4g19006 : 151.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000829.3","No alias","Cyanophora paradoxa","(at3g44340 : 410.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.30","No alias","Cyanophora paradoxa","(at5g18700 : 628.0) Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo.  Required for cell plate expansion in cytokinesis.; Protein kinase family protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33940.2); Has 133671 Blast hits to 131461 proteins in 4761 species: Archae - 230; Bacteria - 15366; Metazoa - 49337; Fungi - 13216; Plants - 32681; Viruses - 728; Other Eukaryotes - 22113 (source: NCBI BLink). & (q7y0b9|sapk8_orysa : 131.0) Serine/threonine-protein kinase SAPK8 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 8) - Oryza sativa (Rice) & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.25","No alias","Cyanophora paradoxa","(at3g18190 : 640.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (p40412|tcpe1_avesa : 285.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000851.24","No alias","Cyanophora paradoxa","(at4g05420 : 684.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1368.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000912.27","No alias","Cyanophora paradoxa","(at1g73450 : 451.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 91653 Blast hits to 89873 proteins in 2996 species: Archae - 91; Bacteria - 10272; Metazoa - 34556; Fungi - 12029; Plants - 16764; Viruses - 383; Other Eukaryotes - 17558 (source: NCBI BLink). & (q5zci1|mpk10_orysa : 127.0) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.28","No alias","Cyanophora paradoxa","(at1g20540 : 258.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (TAIR:AT1G76260.1); Has 8926 Blast hits to 7393 proteins in 418 species: Archae - 0; Bacteria - 876; Metazoa - 3687; Fungi - 2097; Plants - 1353; Viruses - 0; Other Eukaryotes - 913 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001314.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001376.20","No alias","Cyanophora paradoxa","(at5g11170 : 543.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40471|if4a9_tobac : 218.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (reliability: 1086.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001376.21","No alias","Cyanophora paradoxa","(at5g11200 : 84.7) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11170.1); Has 43305 Blast hits to 42684 proteins in 3065 species: Archae - 845; Bacteria - 22038; Metazoa - 6141; Fungi - 4560; Plants - 2670; Viruses - 60; Other Eukaryotes - 6991 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001384.5","No alias","Cyanophora paradoxa","(q9sbw3|pp2a4_orysa : 503.0) Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (at1g10430 : 498.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001501.4","No alias","Cyanophora paradoxa","(at1g04510 : 111.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19.  Associated with the MOS4-Associated Complex (MAC).  Involved in plant innate immunity.; MOS4-associated  complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated  complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.156","No alias","Cyanophora paradoxa","(at4g31480 : 943.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (reliability: 1886.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.138","No alias","Cyanophora paradoxa","(at1g07705 : 132.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.80","No alias","Cyanophora paradoxa","(at4g14800 : 210.0) Encodes 20S proteasome beta subunit PBD2 (PBD2).; 20S proteasome beta subunit D2 (PBD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit D1 (TAIR:AT3G22630.1). & (q9lst6|psb2_orysa : 199.0) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4) - Oryza sativa (Rice) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.5","No alias","Cyanophora paradoxa","(p93768|psmd3_tobac : 370.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g75990 : 352.0) PAM domain (PCI/PINT associated module) protein; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G20200.1); Has 740 Blast hits to 739 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 146; Plants - 168; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020703.19","No alias","Cyanophora paradoxa","(at1g50200 : 1004.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (reliability: 2008.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020851.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020903.33","No alias","Cyanophora paradoxa","(at1g79990 : 1008.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (p49178|gbb_maize : 87.8) Guanine nucleotide-binding protein subunit beta - Zea mays (Maize) & (reliability: 2016.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.55","No alias","Cyanophora paradoxa","(at1g76400 : 327.0) Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT2G01720.1); Has 398 Blast hits to 398 proteins in 180 species: Archae - 2; Bacteria - 2; Metazoa - 149; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.69","No alias","Cyanophora paradoxa","(at1g06220 : 825.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 388.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1650.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020918.12","No alias","Cyanophora paradoxa","(at1g67890 : 126.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (o82039|spy_pethy : 100.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020930.28","No alias","Cyanophora paradoxa","(at2g34040 : 183.0) Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: anti-apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT1G29030.1); Has 227 Blast hits to 217 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021135.36","No alias","Cyanophora paradoxa","(at3g23810 : 517.0) S-adenosyl-l-homocysteine (SAH) hydrolase 2 (SAHH2); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: one-carbon metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-homocysteine hydrolase (TAIR:AT4G13940.1); Has 7939 Blast hits to 7933 proteins in 1466 species: Archae - 229; Bacteria - 2315; Metazoa - 640; Fungi - 145; Plants - 247; Viruses - 0; Other Eukaryotes - 4363 (source: NCBI BLink). & (q01781|sahh_petcr : 510.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1034.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021168.12","No alias","Cyanophora paradoxa","(at5g56280 : 89.4) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00021293.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021350.16","No alias","Cyanophora paradoxa","(at3g20050 : 727.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (p54411|tcpe2_avesa : 242.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1454.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.38","No alias","Cyanophora paradoxa","(at3g24090 : 644.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021434.20","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021435.13","No alias","Cyanophora paradoxa","(at2g26990 : 239.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021501.12","No alias","Cyanophora paradoxa","(at1g14650 : 246.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 492.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021590.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021680.16","No alias","Cyanophora paradoxa","(at5g42970 : 409.0) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.; CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8); FUNCTIONS IN: protein binding; INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis; LOCATED IN: signalosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021680.25","No alias","Cyanophora paradoxa","(at5g67320 : 318.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.51","No alias","Cyanophora paradoxa","(q9sc88|gcp4_medtr : 315.0) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (at3g53760 : 290.0) Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.; GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1249 Blast hits to 1181 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 551; Fungi - 320; Plants - 155; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"Glyma.01G006400","No alias","Glycine max","Arginyl-tRNA synthetase, class Ic","protein_coding"
"Glyma.01G009300","No alias","Glycine max","staurosporin and temperature sensitive 3-like A","protein_coding"
"Glyma.01G016900","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.01G032500","No alias","Glycine max","Threonyl-tRNA synthetase","protein_coding"
"Glyma.01G063000","No alias","Glycine max","reversibly glycosylated polypeptide 3","protein_coding"
"Glyma.01G068000","No alias","Glycine max","Chaperone protein htpG family protein","protein_coding"
"Glyma.01G207400","No alias","Glycine max","ubiquitin-protein ligases","protein_coding"
"Glyma.02G047800","No alias","Glycine max","Ribosomal protein S4 (RPS4A) family protein","protein_coding"
"Glyma.02G116000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.02G137100","No alias","Glycine max","Sas10/U3 ribonucleoprotein (Utp) family protein","protein_coding"
"Glyma.03G002400","No alias","Glycine max","translation initiation factor 3B1","protein_coding"
"Glyma.03G004400","No alias","Glycine max","proteasome family protein","protein_coding"
"Glyma.03G005900","No alias","Glycine max","Co-chaperone GrpE family protein","protein_coding"
"Glyma.03G024000","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.03G050300","No alias","Glycine max","Ribosomal protein S4 (RPS4A) family protein","protein_coding"
"Glyma.03G122400","No alias","Glycine max","ubiquitin-specific protease 5","protein_coding"
"Glyma.03G155900","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.03G206400","No alias","Glycine max","eukaryotic translation initiation factor 3C","protein_coding"
"Glyma.03G232200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G234900","No alias","Glycine max","pescadillo-related","protein_coding"
"Glyma.04G026100","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Glyma.04G036000","No alias","Glycine max","Peptidase S24/S26A/S26B/S26C family protein","protein_coding"
"Glyma.04G056400","No alias","Glycine max","myosin, putative","protein_coding"
"Glyma.04G060700","No alias","Glycine max","Endomembrane protein 70 protein family","protein_coding"
"Glyma.04G064900","No alias","Glycine max","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.04G174800","No alias","Glycine max","H(+)-ATPase 11","protein_coding"
"Glyma.04G204600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G204800","No alias","Glycine max","phosphate deficiency response 2","protein_coding"
"Glyma.04G234800","No alias","Glycine max","Ribonuclease P protein subunit P38-related","protein_coding"
"Glyma.04G253600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G023000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G074400","No alias","Glycine max","Cytochrome C1 family","protein_coding"
"Glyma.05G245900","No alias","Glycine max","WUSCHEL related homeobox 1","protein_coding"
"Glyma.06G013100","No alias","Glycine max","coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative","protein_coding"
"Glyma.06G083700","No alias","Glycine max","catalytics","protein_coding"
"Glyma.06G183900","No alias","Glycine max","aldehyde dehydrogenase 2B4","protein_coding"
"Glyma.06G186000","No alias","Glycine max","alpha-N-acetylglucosaminidase family / NAGLU family","protein_coding"
"Glyma.06G186800","No alias","Glycine max","DP-E2F-like 1","protein_coding"
"Glyma.07G012300","No alias","Glycine max","ubiquitin-specific protease 6","protein_coding"
"Glyma.07G014400","No alias","Glycine max","Insulinase (Peptidase family M16) protein","protein_coding"
"Glyma.07G034300","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.07G036600","No alias","Glycine max","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Glyma.07G053500","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.07G074800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G102600","No alias","Glycine max","homolog of nucleolar protein NOP56","protein_coding"
"Glyma.07G107800","No alias","Glycine max","3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2","protein_coding"
"Glyma.07G118700","No alias","Glycine max","methyl-CPG-binding domain 7","protein_coding"
"Glyma.07G125400","No alias","Glycine max","Arginyl-tRNA synthetase, class Ic","protein_coding"
"Glyma.07G178400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.07G274200","No alias","Glycine max","phosphate transporter 4;6","protein_coding"
"Glyma.08G018400","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.08G139600","No alias","Glycine max","ENTH/VHS family protein","protein_coding"
"Glyma.08G152400","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.08G176900","No alias","Glycine max","homologue of NAP57","protein_coding"
"Glyma.08G191700","No alias","Glycine max","Survival protein SurE-like phosphatase/nucleotidase","protein_coding"
"Glyma.08G335300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G361900","No alias","Glycine max","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Glyma.09G004700","No alias","Glycine max","Glycine cleavage T-protein family","protein_coding"
"Glyma.09G024800","No alias","Glycine max","GTP binding","protein_coding"
"Glyma.09G029000","No alias","Glycine max","Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein","protein_coding"
"Glyma.09G164700","No alias","Glycine max","paralog of ARC6","protein_coding"
"Glyma.09G166100","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.09G228300","No alias","Glycine max","Uncharacterized protein","protein_coding"
"Glyma.09G285300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.10G017700","No alias","Glycine max","poly(ADP-ribose) polymerase","protein_coding"
"Glyma.10G035800","No alias","Glycine max","autophagy 9 (APG9)","protein_coding"
"Glyma.10G104900","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.10G148800","No alias","Glycine max","importin alpha isoform 1","protein_coding"
"Glyma.10G151900","No alias","Glycine max","regulatory particle triple-A ATPase 5A","protein_coding"
"Glyma.10G171500","No alias","Glycine max","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.10G193000","No alias","Glycine max","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)","protein_coding"
"Glyma.10G217600","No alias","Glycine max","PDI-like 5-2","protein_coding"
"Glyma.10G289800","No alias","Glycine max","IKI3 family protein","protein_coding"
"Glyma.11G006900","No alias","Glycine max","TESMIN/TSO1-like CXC 2","protein_coding"
"Glyma.11G007800","No alias","Glycine max","CVP2 like 1","protein_coding"
"Glyma.11G015600","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.11G117800","No alias","Glycine max","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding"
"Glyma.11G120300","No alias","Glycine max","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Glyma.11G128300","No alias","Glycine max","cell division cycle protein 48-related / CDC48-related","protein_coding"
"Glyma.11G145854","No alias","Glycine max","NOT2 / NOT3 / NOT5 family","protein_coding"
"Glyma.11G147317","No alias","Glycine max","nuclear RNA polymerase C1","protein_coding"
"Glyma.11G181400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G237400","No alias","Glycine max","ENTH/VHS family protein","protein_coding"
"Glyma.12G011800","No alias","Glycine max","ubiquitin-specific protease 24","protein_coding"
"Glyma.12G044200","No alias","Glycine max","DNA-binding family protein","protein_coding"
"Glyma.12G045400","No alias","Glycine max","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Glyma.12G054400","No alias","Glycine max","beta glucosidase 15","protein_coding"
"Glyma.12G180700","No alias","Glycine max","PHD finger family protein","protein_coding"
"Glyma.12G194200","No alias","Glycine max","glutamate receptor 3.4","protein_coding"
"Glyma.12G235000","No alias","Glycine max","Nucleoporin autopeptidase","protein_coding"
"Glyma.13G032300","No alias","Glycine max","nucleotide binding;nucleic acid binding;RNA binding","protein_coding"
"Glyma.13G053100","No alias","Glycine max","N2,N2-dimethylguanosine tRNA methyltransferase","protein_coding"
"Glyma.13G097000","No alias","Glycine max","vernalization5/VIN3-like","protein_coding"
"Glyma.13G115800","No alias","Glycine max","HOPM interactor 7","protein_coding"
"Glyma.13G172200","No alias","Glycine max","Apoptosis inhibitory protein 5 (API5)","protein_coding"
"Glyma.13G278500","No alias","Glycine max","GTP-binding family protein","protein_coding"
"Glyma.13G309700","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding"
"Glyma.13G323200","No alias","Glycine max","ABC transporter family protein","protein_coding"
"Glyma.14G012200","No alias","Glycine max","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Glyma.14G089042","No alias","Glycine max","Transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.14G094600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G096000","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.14G102000","No alias","Glycine max","Endomembrane protein 70 protein family","protein_coding"
"Glyma.14G154500","No alias","Glycine max","nucleotide binding;nucleic acid binding;RNA binding","protein_coding"
"Glyma.14G217900","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding"
"Glyma.15G015700","No alias","Glycine max","PDI-like 1-6","protein_coding"
"Glyma.15G039500","No alias","Glycine max","Noc2p family","protein_coding"
"Glyma.15G095400","No alias","Glycine max","Ribosomal protein L18ae/LX family protein","protein_coding"
"Glyma.15G113900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G177400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G206200","No alias","Glycine max","response regulator 12","protein_coding"
"Glyma.15G250500","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.15G251100","No alias","Glycine max","ubiquitin-specific protease 25","protein_coding"
"Glyma.15G271800","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.16G003700","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.16G006000","No alias","Glycine max","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Glyma.16G077300","No alias","Glycine max","staurosporin and temperature sensitive 3-like A","protein_coding"
"Glyma.16G207300","No alias","Glycine max","Ribosomal protein S3 family protein","protein_coding"
"Glyma.16G208700","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.17G009700","No alias","Glycine max","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.17G026500","No alias","Glycine max","protein arginine methyltransferase 4A","protein_coding"
"Glyma.17G045100","No alias","Glycine max","sec34-like family protein","protein_coding"
"Glyma.17G045500","No alias","Glycine max","eukaryotic translation initiation factor 3K","protein_coding"
"Glyma.17G053800","No alias","Glycine max","nucleosome assembly protein 1;2","protein_coding"
"Glyma.17G076700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G080100","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.17G116200","No alias","Glycine max","CCCH-type zinc finger family protein","protein_coding"
"Glyma.17G232700","No alias","Glycine max","growth-regulating factor 1","protein_coding"
"Glyma.17G240400","No alias","Glycine max","poly(A) binding protein 2","protein_coding"
"Glyma.18G048900","No alias","Glycine max","RECQ helicase SIM","protein_coding"
"Glyma.18G057100","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.18G196000","No alias","Glycine max","acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit","protein_coding"
"Glyma.18G219900","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.18G250100","No alias","Glycine max","Subtilisin-like serine endopeptidase family protein","protein_coding"
"Glyma.18G250700","No alias","Glycine max","Subtilisin-like serine endopeptidase family protein","protein_coding"
"Glyma.18G282800","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.19G001700","No alias","Glycine max","methionine aminopeptidase 2B","protein_coding"
"Glyma.19G033700","No alias","Glycine max","N2,N2-dimethylguanosine tRNA methyltransferase","protein_coding"
"Glyma.19G166100","No alias","Glycine max","casein kinase I-like 6","protein_coding"
"Glyma.19G232500","No alias","Glycine max","pescadillo-related","protein_coding"
"Glyma.20G000700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.20G025500","No alias","Glycine max","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain","protein_coding"
"Glyma.20G093000","No alias","Glycine max","Carbohydrate-binding X8 domain superfamily protein","protein_coding"
"Glyma.20G191700","No alias","Glycine max","binding to TOMV RNA 1L (long form)","protein_coding"
"Glyma.20G223300","No alias","Glycine max","cell division cycle 5","protein_coding"
"Glyma.20G229100","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"GRMZM2G019340","No alias","Zea mays","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"GRMZM2G051367","No alias","Zea mays","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"HORVU0Hr1G014170.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G016430.1","No alias","Hordeum vulgare","arabinogalactan protein *(Xylogen)","protein_coding"
"HORVU0Hr1G026500.1","No alias","Hordeum vulgare","component *(Tim13) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"HORVU0Hr1G039470.1","No alias","Hordeum vulgare","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"HORVU1Hr1G003270.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G020620.7","No alias","Hordeum vulgare","component *(ELP2) of ELONGATOR transcription elongation complex","protein_coding"
"HORVU1Hr1G042520.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G045720.1","No alias","Hordeum vulgare","mitochondrial NAD-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU1Hr1G081790.1","No alias","Hordeum vulgare","component *(bL20m) of large mitoribosomal-subunit proteome","protein_coding"
"HORVU1Hr1G091090.9","No alias","Hordeum vulgare","sterol delta14 reductase & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"HORVU2Hr1G015360.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G015410.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G032910.2","No alias","Hordeum vulgare","component *(mL104) of large mitoribosomal-subunit proteome & regulatory protein *(PNM1) of mitochondrial translation machinery","protein_coding"
"HORVU2Hr1G036000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G059750.1","No alias","Hordeum vulgare","deubiquitinase *(UBP5/8-11)","protein_coding"
"HORVU2Hr1G060440.6","No alias","Hordeum vulgare","regulatory protein of DNA methylation pathway *(IDN/IDP)","protein_coding"
"HORVU2Hr1G066950.2","No alias","Hordeum vulgare","prolyl hydroxylase","protein_coding"
"HORVU2Hr1G068970.1","No alias","Hordeum vulgare","SMARCD component *(SWP73) of chromatin remodeling complex","protein_coding"
"HORVU2Hr1G071180.1","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding"
"HORVU2Hr1G079960.4","No alias","Hordeum vulgare","gamma-glutamyl transpeptidase *(GGT)","protein_coding"
"HORVU2Hr1G090310.1","No alias","Hordeum vulgare","iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)","protein_coding"
"HORVU2Hr1G099460.4","No alias","Hordeum vulgare","subunit epsilon of coat protein complex","protein_coding"
"HORVU2Hr1G103520.7","No alias","Hordeum vulgare","regulatory protein *(NCL) of rRNA transcription","protein_coding"
"HORVU2Hr1G104110.1","No alias","Hordeum vulgare","UDP-D-xylose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"HORVU2Hr1G119960.1","No alias","Hordeum vulgare","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"HORVU3Hr1G057320.1","No alias","Hordeum vulgare","nucleocytoplasmic export karyopherin *(XPO2)","protein_coding"
"HORVU3Hr1G068500.2","No alias","Hordeum vulgare","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"HORVU3Hr1G069520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G082580.2","No alias","Hordeum vulgare","anion transporter *(NRT1/PTR)","protein_coding"
"HORVU3Hr1G096430.2","No alias","Hordeum vulgare","bHLH-type transcription factor","protein_coding"
"HORVU3Hr1G112590.1","No alias","Hordeum vulgare","plastidial UMP kinase *(PUMPKIN)","protein_coding"
"HORVU4Hr1G016440.1","No alias","Hordeum vulgare","RNA editing factor *(MORF)","protein_coding"
"HORVU4Hr1G018230.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G043910.1","No alias","Hordeum vulgare","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"HORVU4Hr1G052920.2","No alias","Hordeum vulgare","RNA polymerase-II nuclear import factor *(GPN1)","protein_coding"
"HORVU4Hr1G057080.2","No alias","Hordeum vulgare","substrate adaptor *(ABD1)","protein_coding"
"HORVU4Hr1G064020.1","No alias","Hordeum vulgare","component *(Snu13) of snoRNP rRNA methylation complex & component *(SNU13) of spliceosomal U4/U6 snRNP","protein_coding"
"HORVU4Hr1G078580.2","No alias","Hordeum vulgare","pre-60S ribosomal subunit assembly factor *(EBP2)","protein_coding"
"HORVU4Hr1G080000.1","No alias","Hordeum vulgare","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"HORVU4Hr1G080140.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G086330.5","No alias","Hordeum vulgare","membrane insertase (Oxa1) of cytochrome c oxidase assembly & insertase component *(Oxa1) of inner mitochondrion membrane presequence-dependent insertion system","protein_coding"
"HORVU5Hr1G008300.1","No alias","Hordeum vulgare","component *(uS10) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU5Hr1G009740.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G046220.1","No alias","Hordeum vulgare","gibberellin modification enzyme *(ELA) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU5Hr1G058270.1","No alias","Hordeum vulgare","subgroup ERF-I transcription factor","protein_coding"
"HORVU5Hr1G071840.1","No alias","Hordeum vulgare","pre-40S ribosomal-subunit proteome nuclear export factor *(Ltv1)","protein_coding"
"HORVU5Hr1G075490.3","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2)","protein_coding"
"HORVU5Hr1G125130.1","No alias","Hordeum vulgare","subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)","protein_coding"
"HORVU6Hr1G026800.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G046420.25","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G059550.2","No alias","Hordeum vulgare","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU6Hr1G063300.2","No alias","Hordeum vulgare","chaperone component *(PEX19) of PEX19 insertion system","protein_coding"
"HORVU6Hr1G066160.1","No alias","Hordeum vulgare","component *(Tim13) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"HORVU6Hr1G073590.1","No alias","Hordeum vulgare","organelle RNA splicing factor *(APO)","protein_coding"
"HORVU7Hr1G051570.2","No alias","Hordeum vulgare","EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"HORVU7Hr1G056910.1","No alias","Hordeum vulgare","RNA splicing regulator *(NSR)","protein_coding"
"HORVU7Hr1G058850.2","No alias","Hordeum vulgare","apocytochrome c1 component of cytochrome c reductase complex","protein_coding"
"HORVU7Hr1G072710.9","No alias","Hordeum vulgare","component *(RRP42) of exosome EXO9 core complex","protein_coding"
"HORVU7Hr1G074820.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G080310.1","No alias","Hordeum vulgare","subunit gamma *(CCT3) of CCT chaperonin folding complex","protein_coding"
"HORVU7Hr1G084900.14","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00001_0300","kfl00001_0300_v1.1","Klebsormidium nitens","(at2g34660 : 1442.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 132.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2884.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0310","kfl00013_0310_v1.1","Klebsormidium nitens","(at4g31480 : 1299.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (reliability: 2598.0) &  (original description: no original description)","protein_coding"
"Kfl00018_0430","kfl00018_0430_v1.1","Klebsormidium nitens","(at2g38020 : 768.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 1536.0) &  (original description: no original description)","protein_coding"
"Kfl00019_0370","kfl00019_0370_v1.1","Klebsormidium nitens","(at2g45280 : 300.0) Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay.  Required for female meiosis but not critical for mitosis under normal conditions.; RAS associated with diabetes protein 51C (RAD51C); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1). & (p37384|dmc1_lillo : 110.0) Meiotic recombination protein DMC1 homolog - Lilium longiflorum (Trumpet lily) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0380","kfl00022_0380_v1.1","Klebsormidium nitens","(at1g50120 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0380","kfl00026_0380_v1.1","Klebsormidium nitens","(at1g67930 : 735.0) Golgi transport complex protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit  5 (InterPro:IPR019465); Has 4471 Blast hits to 590 proteins in 146 species: Archae - 0; Bacteria - 79; Metazoa - 393; Fungi - 221; Plants - 65; Viruses - 7; Other Eukaryotes - 3706 (source: NCBI BLink). & (reliability: 1470.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0180","kfl00030_0180_v1.1","Klebsormidium nitens","(p36444|maoc_flapr : 769.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Flaveria pringlei & (at1g79750 : 746.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (reliability: 1492.0) &  (original description: no original description)","protein_coding"
"Kfl00035_0050","kfl00035_0050_v1.1","Klebsormidium nitens","(at4g02030 : 530.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00044_0130","kfl00044_0130_v1.1","Klebsormidium nitens","(at3g58800 : 217.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0050","kfl00045_0050_v1.1","Klebsormidium nitens","(at1g29310 : 814.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1628.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0430","kfl00045_0430_v1.1","Klebsormidium nitens","(at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 95.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2452.0) &  (original description: no original description)","protein_coding"
"Kfl00047_0100","kfl00047_0100_v1.1","Klebsormidium nitens","(at4g21150 : 243.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"Kfl00048_0480","kfl00048_0480_v1.1","Klebsormidium nitens","(at3g02090 : 607.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (p29677|mppa_soltu : 197.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"Kfl00050_0230","kfl00050_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00055_0050","kfl00055_0050_v1.1","Klebsormidium nitens","(at1g47640 : 259.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"Kfl00055_0060","kfl00055_0060_v1.1","Klebsormidium nitens","(at1g30230 : 185.0) Glutathione S-transferase, C-terminal-like;Translation elongation  factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation  factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation  factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40680|ef1d1_orysa : 179.0) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation factor 1B-beta 1) (eEF-1B beta 1) - Oryza sativa (Rice) & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0040","kfl00060_0040_v1.1","Klebsormidium nitens","(at1g08980 : 241.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro.  This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0030","kfl00061_0030_v1.1","Klebsormidium nitens","(q6f2u9|syk_orysa : 700.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (at3g11710 : 677.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (reliability: 1354.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0040","kfl00061_0040_v1.1","Klebsormidium nitens","(at2g30970 : 453.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p28011|aat1_medsa : 359.0) Aspartate aminotransferase 1 (EC 2.6.1.1) (Transaminase A) - Medicago sativa (Alfalfa) & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"Kfl00067_0170","kfl00067_0170_v1.1","Klebsormidium nitens","(at4g24840 : 573.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"Kfl00079_0090","kfl00079_0090_v1.1","Klebsormidium nitens","(at1g72550 : 716.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1432.0) &  (original description: no original description)","protein_coding"
"Kfl00083_0250","kfl00083_0250_v1.1","Klebsormidium nitens","(at5g66680 : 484.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 968.0) &  (original description: no original description)","protein_coding"
"Kfl00085_0210","kfl00085_0210_v1.1","Klebsormidium nitens","(p00693|amy1_horvu : 343.0) Alpha-amylase type A isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY1) (Low pI alpha-amylase) - Hordeum vulgare (Barley) & (at1g69830 : 326.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation.  Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0040","kfl00121_0040_v1.1","Klebsormidium nitens","(at5g63840 : 969.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q653v7|aglu_orysa : 313.0) Probable alpha-glucosidase Os06g0675700 precursor (EC 3.2.1.20) (Maltase) - Oryza sativa (Rice) & (reliability: 1938.0) &  (original description: no original description)","protein_coding"
"Kfl00122_0070","kfl00122_0070_v1.1","Klebsormidium nitens","(at5g49020 : 540.0) Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 4A (PRMT4A); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4B (TAIR:AT3G06930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"Kfl00126_0190","kfl00126_0190_v1.1","Klebsormidium nitens","(at1g60070 : 871.0) Adaptor protein complex AP-1, gamma subunit; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). & (reliability: 1742.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0340","kfl00144_0340_v1.1","Klebsormidium nitens","(at5g20990 : 432.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"Kfl00154_0220","kfl00154_0220_v1.1","Klebsormidium nitens","(at1g04510 : 621.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19.  Associated with the MOS4-Associated Complex (MAC).  Involved in plant innate immunity.; MOS4-associated  complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated  complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93107|pf20_chlre : 91.3) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"Kfl00174_0030","kfl00174_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00178_0050","kfl00178_0050_v1.1","Klebsormidium nitens","(at5g19690 : 554.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"Kfl00186_0220","kfl00186_0220_v1.1","Klebsormidium nitens","(at4g29680 : 423.0) Alkaline-phosphatase-like family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process, nucleotide metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT4G29690.1); Has 2446 Blast hits to 2426 proteins in 629 species: Archae - 13; Bacteria - 1090; Metazoa - 671; Fungi - 207; Plants - 107; Viruses - 6; Other Eukaryotes - 352 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"Kfl00187_0130","kfl00187_0130_v1.1","Klebsormidium nitens","(at1g63770 : 1127.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (reliability: 2254.0) &  (original description: no original description)","protein_coding"
"Kfl00203_0030","kfl00203_0030_v1.1","Klebsormidium nitens","(q6vaf9|tba4_goshi : 753.0) Tubulin alpha-4 chain (Alpha-4 tubulin) - Gossypium hirsutum (Upland cotton) & (at1g50010 : 748.0) Encodes alpha-2,4 tubulin.  TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1496.0) &  (original description: no original description)","protein_coding"
"Kfl00215_0220","kfl00215_0220_v1.1","Klebsormidium nitens","(p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain - Chlamydomonas reinhardtii & (at5g62700 : 813.0) encodes tubulin beta-2/beta-3 chain; tubulin beta chain 3 (TUB3); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to cold; LOCATED IN: tubulin complex, cell wall; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 2 (TAIR:AT5G62690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1626.0) &  (original description: no original description)","protein_coding"
"Kfl00222_0140","kfl00222_0140_v1.1","Klebsormidium nitens","(at4g04955 : 416.0) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.; allantoinase (ALN); CONTAINS InterPro DOMAIN/s: Amidohydrolase 1 (InterPro:IPR006680), Allantoinase (InterPro:IPR017593), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: pyrimidine 2 (TAIR:AT5G12200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"Kfl00229_0080","kfl00229_0080_v1.1","Klebsormidium nitens","(at1g13750 : 309.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 165.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"Kfl00232_0160","kfl00232_0160_v1.1","Klebsormidium nitens","(at5g22350 : 369.0) ELONGATED MITOCHONDRIA 1 (ELM1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1022 (InterPro:IPR009367); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1022) (TAIR:AT5G06180.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"Kfl00232_0200","kfl00232_0200_v1.1","Klebsormidium nitens","(at3g51050 : 613.0) FG-GAP repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell-matrix adhesion; LOCATED IN: integrin complex, integral to membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 99 Blast hits to 94 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1226.0) &  (original description: no original description)","protein_coding"
"Kfl00234_0130","kfl00234_0130_v1.1","Klebsormidium nitens","(at3g15840 : 239.0) Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.; post-illumination chlorophyll fluorescence increase (PIFI); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlororespiration; LOCATED IN: chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl00244_0010","kfl00244_0010_v1.1","Klebsormidium nitens","(at5g05200 : 551.0) Protein kinase superfamily protein; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1102.0) &  (original description: no original description)","protein_coding"
"Kfl00246_0090","kfl00246_0090_v1.1","Klebsormidium nitens","(at5g13390 : 594.0) Required for normal pollen development and lipid accumulation within the tapetum; NO EXINE FORMATION 1 (NEF1); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1188.0) &  (original description: no original description)","protein_coding"
"Kfl00259_0040","kfl00259_0040_v1.1","Klebsormidium nitens","(q84zc0|vath_orysa : 451.0) Probable vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) - Oryza sativa (Rice) & (at3g42050 : 440.0) vacuolar ATP synthase subunit H family protein; FUNCTIONS IN: binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit H (InterPro:IPR004908), ATPase, V1 complex, subunit H, C-terminal (InterPro:IPR011987), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 505 Blast hits to 479 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 202; Fungi - 135; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"Kfl00263_0210","kfl00263_0210_v1.1","Klebsormidium nitens","(at3g22290 : 334.0) Endoplasmic reticulum vesicle transporter protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1158 Blast hits to 1071 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 384; Fungi - 263; Plants - 270; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"Kfl00286_0090","kfl00286_0090_v1.1","Klebsormidium nitens","(q7xhl3|tydc1_orysa : 587.0) Tyrosine decarboxylase 1 (EC 4.1.1.25) - Oryza sativa (Rice) & (at2g20340 : 582.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, tyrosine decarboxylase activity; INVOLVED IN: response to wounding, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aromatic-L-amino-acid decarboxylase (InterPro:IPR010977), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Pyridoxal-phosphate binding site (InterPro:IPR021115), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: L-tyrosine decarboxylase (TAIR:AT4G28680.1); Has 5452 Blast hits to 5431 proteins in 1792 species: Archae - 99; Bacteria - 1888; Metazoa - 2300; Fungi - 264; Plants - 262; Viruses - 5; Other Eukaryotes - 634 (source: NCBI BLink). & (reliability: 1164.0) &  (original description: no original description)","protein_coding"
"Kfl00307_0060","kfl00307_0060_v1.1","Klebsormidium nitens","(at5g27970 : 963.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: HOPM interactor 7 (TAIR:AT3G43300.1). & (reliability: 1926.0) &  (original description: no original description)","protein_coding"
"Kfl00309_0060","kfl00309_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00309_0140","kfl00309_0140_v1.1","Klebsormidium nitens","(at1g34780 : 82.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.  This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APR-like 4 (APRL4); LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APR-like 6 (TAIR:AT4G08930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"Kfl00312_0090","kfl00312_0090_v1.1","Klebsormidium nitens","(at5g49950 : 321.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G34340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00319_0050","kfl00319_0050_v1.1","Klebsormidium nitens","(at1g30580 : 635.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP-binding protein-related (TAIR:AT1G56050.1); Has 19150 Blast hits to 19146 proteins in 3028 species: Archae - 362; Bacteria - 11244; Metazoa - 716; Fungi - 612; Plants - 292; Viruses - 0; Other Eukaryotes - 5924 (source: NCBI BLink). & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"Kfl00320_0010","kfl00320_0010_v1.1","Klebsormidium nitens","(at1g31860 : 281.0) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"Kfl00326_0130","kfl00326_0130_v1.1","Klebsormidium nitens","(at5g17630 : 356.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p21727|tpt_pea : 253.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"Kfl00343_0140","kfl00343_0140_v1.1","Klebsormidium nitens","(at4g38220 : 482.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 964.0) &  (original description: no original description)","protein_coding"
"Kfl00351_0120","kfl00351_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00373_0110","kfl00373_0110_v1.1","Klebsormidium nitens","(at1g06220 : 1359.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 538.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2718.0) &  (original description: no original description)","protein_coding"
"Kfl00373_0140","kfl00373_0140_v1.1","Klebsormidium nitens","(at1g63160 : 486.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00385_0100","kfl00385_0100_v1.1","Klebsormidium nitens","(p34923|g3pc_phypa : 512.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Physcomitrella patens (Moss) & (at1g79530 : 496.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (reliability: 992.0) &  (original description: no original description)","protein_coding"
"Kfl00387_0040","kfl00387_0040_v1.1","Klebsormidium nitens","(at4g20130 : 193.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00404_0130","kfl00404_0130_v1.1","Klebsormidium nitens","(at4g30510 : 248.0) ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATATG18B); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.3); Has 1236 Blast hits to 1191 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 531; Fungi - 404; Plants - 152; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"Kfl00422_0130","kfl00422_0130_v1.1","Klebsormidium nitens","(at3g46970 : 855.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (p53537|phsh_vicfa : 846.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Vicia faba (Broad bean) & (reliability: 1710.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0010","kfl00425_0010_v1.1","Klebsormidium nitens","(at2g39350 : 164.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink). & (q8gu89|pdr4_orysa : 125.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"Kfl00441_0060","kfl00441_0060_v1.1","Klebsormidium nitens","(at1g65820 : 87.8) microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"Kfl00461_0080","kfl00461_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00468_0080","kfl00468_0080_v1.1","Klebsormidium nitens","(at5g11560 : 621.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1242.0) &  (original description: no original description)","protein_coding"
"Kfl00475_0080","kfl00475_0080_v1.1","Klebsormidium nitens","(at4g38510 : 808.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 807.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0130","kfl00481_0130_v1.1","Klebsormidium nitens","(at3g13930 : 474.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (reliability: 948.0) &  (original description: no original description)","protein_coding"
"Kfl00487_0040","kfl00487_0040_v1.1","Klebsormidium nitens","(at2g41700 : 197.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00495_0030","kfl00495_0030_v1.1","Klebsormidium nitens","(at1g14620 : 125.0) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"Kfl00527_0020","kfl00527_0020_v1.1","Klebsormidium nitens","(at5g62600 : 657.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G12930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1314.0) &  (original description: no original description)","protein_coding"
"Kfl00538_0040","kfl00538_0040_v1.1","Klebsormidium nitens","(at2g05120 : 259.0) Nucleoporin, Nup133/Nup155-like; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"Kfl00593_0070","kfl00593_0070_v1.1","Klebsormidium nitens","(at5g13520 : 527.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1054.0) &  (original description: no original description)","protein_coding"
"Kfl00602_0030","kfl00602_0030_v1.1","Klebsormidium nitens","(at2g42770 : 196.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT5G43140.1); Has 1184 Blast hits to 1184 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 462; Fungi - 330; Plants - 259; Viruses - 11; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"Kfl00643_0090","kfl00643_0090_v1.1","Klebsormidium nitens","(at5g49460 : 988.0) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL); ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zl94|suca_orysa : 97.4) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 1976.0) &  (original description: no original description)","protein_coding"
"Kfl00700_0040","kfl00700_0040_v1.1","Klebsormidium nitens","(at1g76260 : 316.0) DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (DWA2); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G20540.1); Has 7905 Blast hits to 6688 proteins in 412 species: Archae - 0; Bacteria - 764; Metazoa - 3555; Fungi - 1654; Plants - 1112; Viruses - 0; Other Eukaryotes - 820 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"Kfl00706_0020","kfl00706_0020_v1.1","Klebsormidium nitens","(at1g74910 : 576.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 1152.0) &  (original description: no original description)","protein_coding"
"Kfl00768_0030","kfl00768_0030_v1.1","Klebsormidium nitens","(at4g17610 : 561.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (reliability: 1122.0) &  (original description: no original description)","protein_coding"
"Kfl00774_0040","kfl00774_0040_v1.1","Klebsormidium nitens","(at3g54250 : 426.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"Kfl00802_0070","kfl00802_0070_v1.1","Klebsormidium nitens","(at3g47060 : 201.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). & (o82150|ftsh_tobac : 199.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00807_0050","kfl00807_0050_v1.1","Klebsormidium nitens","(p52903|odpa_soltu : 517.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (at1g59900 : 505.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (reliability: 1010.0) &  (original description: no original description)","protein_coding"
"Kfl00820_0010","kfl00820_0010_v1.1","Klebsormidium nitens","(at3g25620 : 304.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1). & (q8gu89|pdr4_orysa : 138.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"Kfl00873_0040","kfl00873_0040_v1.1","Klebsormidium nitens","(q9mut9|rk2_mesvi : 260.0) Chloroplast 50S ribosomal protein L2 - Mesostigma viride & (atcg01310 : 240.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Kfl00925_0040","kfl00925_0040_v1.1","Klebsormidium nitens","(at1g72660 : 651.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1302.0) &  (original description: no original description)","protein_coding"
"Kfl01038_0010","kfl01038_0010_v1.1","Klebsormidium nitens","(p19023|atpbm_maize : 822.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Zea mays (Maize) & (at5g08680 : 786.0) Encodes the mitochondrial ATP synthase beta-subunit.  This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1572.0) &  (original description: no original description)","protein_coding"
"Kfl01057_0020","kfl01057_0020_v1.1","Klebsormidium nitens","(at5g11980 : 597.0) conserved oligomeric Golgi complex component-related / COG complex component-related; CONTAINS InterPro DOMAIN/s: Conserved oligomeric Golgi complex, subunit 8 (InterPro:IPR016632), Dor1-like protein (InterPro:IPR007255); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1194.0) &  (original description: no original description)","protein_coding"
"Kfl01107_0020","kfl01107_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g05130","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g07620","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g12560","No alias","Oryza sativa","3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed","protein_coding"
"LOC_Os01g12870","No alias","Oryza sativa","eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed","protein_coding"
"LOC_Os01g16210","No alias","Oryza sativa","uncharacterized Cys-rich domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g42030","No alias","Oryza sativa","mitochondrial chaperone BCS1, putative, expressed","protein_coding"
"LOC_Os01g43250","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os01g46070","No alias","Oryza sativa","lactate/malate dehydrogenase, putative, expressed","protein_coding"
"LOC_Os01g54960","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g02360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g10810","No alias","Oryza sativa","protein of unknown function domain containing protein, expressed","protein_coding"
"LOC_Os02g13530","No alias","Oryza sativa","40S ribosomal protein S24, putative, expressed","protein_coding"
"LOC_Os02g13660","No alias","Oryza sativa","meiosis 5, putative, expressed","protein_coding"
"LOC_Os02g14059","No alias","Oryza sativa","ribosomal protein L5, putative, expressed","protein_coding"
"LOC_Os02g39060","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os02g39180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g45090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g51420","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g54470","No alias","Oryza sativa","60S ribosomal protein L35a-3, putative, expressed","protein_coding"
"LOC_Os03g49210","No alias","Oryza sativa","BRCA1 C Terminus domain containing protein, expressed","protein_coding"
"LOC_Os03g58204","No alias","Oryza sativa","ribosomal protein L4, putative, expressed","protein_coding"
"LOC_Os03g59550","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os03g61790","No alias","Oryza sativa","RNA 3-terminal phosphate cyclase, putative, expressed","protein_coding"
"LOC_Os03g61960","No alias","Oryza sativa","2Fe-2S iron-sulfur cluster binding domain containing protein, expressed","protein_coding"
"LOC_Os03g63690","No alias","Oryza sativa","BCCIP, putative, expressed","protein_coding"
"LOC_Os04g25360","No alias","Oryza sativa","tRNA methyltransferase complex GCD14 subunit, putative, expressed","protein_coding"
"LOC_Os04g52780","No alias","Oryza sativa","leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed","protein_coding"
"LOC_Os04g53350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g56010","No alias","Oryza sativa","glycine-rich cell wall structural protein 1 precursor, putative, expressed","protein_coding"
"LOC_Os04g57150","No alias","Oryza sativa","tafazzin, putative, expressed","protein_coding"
"LOC_Os04g58830","No alias","Oryza sativa","ribosome biogenesis regulatory protein, putative, expressed","protein_coding"
"LOC_Os05g01090","No alias","Oryza sativa","pex14, putative, expressed","protein_coding"
"LOC_Os05g05280","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os05g06330","No alias","Oryza sativa","nifU, putative, expressed","protein_coding"
"LOC_Os05g32600","No alias","Oryza sativa","cyclin-dependent kinase D-1, putative, expressed","protein_coding"
"LOC_Os05g51140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g08910","No alias","Oryza sativa","glutamate receptor 2.8 precursor, putative, expressed","protein_coding"
"LOC_Os06g34570","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g37150","No alias","Oryza sativa","L-ascorbate oxidase precursor, putative, expressed","protein_coding"
"LOC_Os07g05290","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g06980","No alias","Oryza sativa","histone deacetylase, putative, expressed","protein_coding"
"LOC_Os07g09450","No alias","Oryza sativa","heat shock protein DnaJ, putative, expressed","protein_coding"
"LOC_Os07g10830","No alias","Oryza sativa","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed","protein_coding"
"LOC_Os07g11970","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os07g40930","No alias","Oryza sativa","WD repeat-containing protein 12, putative, expressed","protein_coding"
"LOC_Os07g44230","No alias","Oryza sativa","ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative, expressed","protein_coding"
"LOC_Os07g48300","No alias","Oryza sativa","eukaryotic translation initiation factor 2 subunit beta, putative, expressed","protein_coding"
"LOC_Os08g02380","No alias","Oryza sativa","kinesin motor domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g05880","No alias","Oryza sativa","Brix domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g09900","No alias","Oryza sativa","WRKY118, expressed","protein_coding"
"LOC_Os08g13690","No alias","Oryza sativa","60S ribosomal protein L7, putative, expressed","protein_coding"
"LOC_Os08g19650","No alias","Oryza sativa","homeobox protein knotted-1, putative, expressed","protein_coding"
"LOC_Os09g02530","No alias","Oryza sativa","cyclin-like F-box, putative, expressed","protein_coding"
"LOC_Os09g21770","No alias","Oryza sativa","ES43 protein, putative, expressed","protein_coding"
"LOC_Os09g25070","No alias","Oryza sativa","WRKY62, expressed","protein_coding"
"LOC_Os09g26460","No alias","Oryza sativa","protein binding protein, putative, expressed","protein_coding"
"LOC_Os09g32300","No alias","Oryza sativa","KH domain-containing protein, putative, expressed","protein_coding"
"LOC_Os09g32988","No alias","Oryza sativa","POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed","protein_coding"
"LOC_Os09g34910","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 7, putative, expressed","protein_coding"
"LOC_Os09g35690","No alias","Oryza sativa","zinc RING finger protein, putative, expressed","protein_coding"
"LOC_Os09g37344","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g05530","No alias","Oryza sativa","OsFBX372 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g10434","No alias","Oryza sativa","dimethyladenosine transferase, putative, expressed","protein_coding"
"LOC_Os10g33270","No alias","Oryza sativa","cyanate hydratase, putative, expressed","protein_coding"
"LOC_Os10g35690","No alias","Oryza sativa","ribosomal protein S18 containing protein, expressed","protein_coding"
"LOC_Os10g38930","No alias","Oryza sativa","shikimate/quinate 5-dehydrogenase, putative, expressed","protein_coding"
"LOC_Os10g39680","No alias","Oryza sativa","CHIT14 - Chitinase family protein precursor, expressed","protein_coding"
"LOC_Os10g41510","No alias","Oryza sativa","calcineurin B, putative, expressed","protein_coding"
"LOC_Os11g13800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g37960","No alias","Oryza sativa","WIP4 - Wound-induced protein precursor, expressed","protein_coding"
"LOC_Os12g07060","No alias","Oryza sativa","chaperone protein dnaJ, putative, expressed","protein_coding"
"LOC_Os12g36880","No alias","Oryza sativa","pathogenesis-related Bet v I family protein, putative, expressed","protein_coding"
"MA_10098803g0010","No alias","Picea abies","(at1g28230 : 206.0) Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.; purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"MA_103794g0010","No alias","Picea abies","(at2g33150 : 188.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"MA_103912g0010","No alias","Picea abies","(at1g08230 : 488.0) Transmembrane amino acid transporter family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G41800.1); Has 2686 Blast hits to 2681 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 558; Fungi - 296; Plants - 1464; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (reliability: 976.0) &  (original description: no original description)","protein_coding"
"MA_10426065g0010","No alias","Picea abies",""(at5g36110 : 446.0) member of CYP716A; ""cytochrome P450, family 716, subfamily A, polypeptide 1"" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6f4f5|c724b_orysa : 230.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (reliability: 892.0) &  (original description: no original description)"","protein_coding"
"MA_10426758g0020","No alias","Picea abies","(o23755|ef2_betvu : 816.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (at1g56070 : 814.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (reliability: 1628.0) &  (original description: no original description)","protein_coding"
"MA_10428218g0010","No alias","Picea abies","(at3g04610 : 399.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"MA_10428461g0010","No alias","Picea abies","(q43077|amo_pea : 186.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (at4g14940 : 180.0) atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development.; amine oxidase 1 (AO1); FUNCTIONS IN: primary amine oxidase activity, copper ion binding; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1545 Blast hits to 1541 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 250; Fungi - 453; Plants - 241; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"MA_10428568g0010","No alias","Picea abies","(q9lej0|eno1_hevbr : 731.0) Enolase 1 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 1) (2-phospho-D-glycerate hydro-lyase 1) (Allergen Hev b 9) - Hevea brasiliensis (Para rubber tree) & (at2g36530 : 717.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (reliability: 1434.0) &  (original description: no original description)","protein_coding"
"MA_10428829g0010","No alias","Picea abies","(at2g33150 : 177.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"MA_10429417g0010","No alias","Picea abies","(at1g20510 : 217.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p14913|4cl2_petcr : 94.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"MA_10430268g0010","No alias","Picea abies","(at5g18840 : 503.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41144|stc_ricco : 174.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"MA_10430352g0010","No alias","Picea abies","(at4g14900 : 191.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT3G22440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"MA_10430574g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10431009g0010","No alias","Picea abies","(at3g47520 : 548.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (q42972|mdhg_orysa : 407.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Oryza sativa (Rice) & (reliability: 1096.0) &  (original description: no original description)","protein_coding"
"MA_10431883g0020","No alias","Picea abies","(at1g73880 : 175.0) UDP-glucosyl transferase 89B1 (UGT89B1); FUNCTIONS IN: in 7 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G51210.1); Has 6052 Blast hits to 5982 proteins in 308 species: Archae - 0; Bacteria - 87; Metazoa - 884; Fungi - 31; Plants - 4945; Viruses - 61; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"MA_10432114g0010","No alias","Picea abies","(at2g01410 : 282.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"MA_10433954g0010","No alias","Picea abies","(at5g21040 : 352.0) Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.; F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"MA_10434287g0020","No alias","Picea abies","(p93338|gapn_nicpl : 840.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 817.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (reliability: 1634.0) &  (original description: no original description)","protein_coding"
"MA_10436101g0010","No alias","Picea abies","(p09189|hsp7c_pethy : 466.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 454.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 908.0) &  (original description: no original description)","protein_coding"
"MA_10436362g0020","No alias","Picea abies","(at1g76940 : 140.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleotide binding;nucleic acid binding (TAIR:AT1G21320.1). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"MA_109804g0010","No alias","Picea abies","(at4g27450 : 268.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p24805|tsjt1_tobac : 125.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"MA_119865g0010","No alias","Picea abies","(at1g69510 : 96.3) cAMP-regulated phosphoprotein 19-related protein; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT5G64130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"MA_121856g0010","No alias","Picea abies","(p21616|avp_phaau : 1186.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at1g15690 : 1177.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (reliability: 2354.0) &  (original description: no original description)","protein_coding"
"MA_123267g0010","No alias","Picea abies","(at2g46210 : 561.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 1122.0) &  (original description: no original description)","protein_coding"
"MA_12503g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_14876g0010","No alias","Picea abies","(at4g37900 : 364.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"MA_15580g0010","No alias","Picea abies","(at3g15020 : 416.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (p83373|mdhm_fraan : 412.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"MA_173360g0010","No alias","Picea abies","(at2g42650 : 123.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G58660.1); Has 1164 Blast hits to 1162 proteins in 304 species: Archae - 34; Bacteria - 0; Metazoa - 441; Fungi - 309; Plants - 224; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"MA_1817879g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_18309g0010","No alias","Picea abies","(at5g16510 : 264.0) Alpha-1,4-glucan-protein synthase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, glycogenin glucosyltransferase activity; INVOLVED IN: response to salt stress; LOCATED IN: cell junction, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 1 (TAIR:AT3G02230.1); Has 238 Blast hits to 236 proteins in 43 species: Archae - 22; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o04300|uptg_pea : 258.0) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) - Pisum sativum (Garden pea) & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"MA_20110g0010","No alias","Picea abies","(at3g11830 : 922.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (p40412|tcpe1_avesa : 259.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1844.0) &  (original description: no original description)","protein_coding"
"MA_2212g0010","No alias","Picea abies","(at4g35080 : 276.0) high-affinity nickel-transport family protein; FUNCTIONS IN: nickel ion transmembrane transporter activity, metal ion binding; INVOLVED IN: nickel ion transport, metal ion transport, transmembrane transport; LOCATED IN: integral to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Nickel/cobalt transporter, high-affinity (InterPro:IPR011541); BEST Arabidopsis thaliana protein match is: high-affinity nickel-transport family protein (TAIR:AT2G16800.1). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"MA_226g0020","No alias","Picea abies","(at1g17520 : 92.0) Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G72740.1); Has 882 Blast hits to 875 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 89; Plants - 618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"MA_231790g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_241180g0010","No alias","Picea abies","(at1g17100 : 219.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"MA_251018g0020","No alias","Picea abies","(at3g12580 : 288.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p09189|hsp7c_pethy : 286.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"MA_258707g0010","No alias","Picea abies","(at4g27720 : 738.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1476.0) &  (original description: no original description)","protein_coding"
"MA_26195g0020","No alias","Picea abies","(at5g49890 : 905.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1810.0) &  (original description: no original description)","protein_coding"
"MA_27352g0010","No alias","Picea abies","(at3g17810 : 556.0) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"MA_35736g0010","No alias","Picea abies","(at1g10360 : 194.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (q06398|gstu6_orysa : 188.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"MA_357774g0010","No alias","Picea abies","(at1g20510 : 187.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24146|4cl2_tobac : 146.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco) & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"MA_392344g0010","No alias","Picea abies","(at1g47530 : 339.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"MA_42861g0010","No alias","Picea abies","(p27788|fer3_maize : 179.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 155.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"MA_436312g0010","No alias","Picea abies","(at5g45420 : 181.0) Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"MA_46288g0010","No alias","Picea abies","(at3g24160 : 220.0) Encodes a putative Type 1 membrane protein (PMP).; putative type 1 membrane protein (PMP); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"MA_5111350g0010","No alias","Picea abies","(at4g12650 : 176.0) Endomembrane protein 70 protein family; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G35160.2); Has 1639 Blast hits to 1594 proteins in 317 species: Archae - 0; Bacteria - 7; Metazoa - 635; Fungi - 224; Plants - 501; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"MA_52972g0010","No alias","Picea abies","(o82035|cadh2_picab : 452.0) Cinnamyl alcohol dehydrogenase 2 (EC 1.1.1.195) (CAD 2) - Picea abies (Norway spruce) (Picea excelsa) & (at4g34230 : 310.0) Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.; cinnamyl alcohol dehydrogenase 5 (CAD5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT3G19450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"MA_5791g0010","No alias","Picea abies","(at3g06790 : 262.0) plastid developmental protein DAG, putative; CONTAINS InterPro DOMAIN/s: Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q38732|dag_antma : 170.0) DAG protein, chloroplast precursor - Antirrhinum majus (Garden snapdragon) & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"MA_5g0040","No alias","Picea abies","(at4g05160 : 362.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0,  C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity, fatty-acyl-CoA synthase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 86858 Blast hits to 79133 proteins in 3797 species: Archae - 1159; Bacteria - 54259; Metazoa - 3570; Fungi - 4802; Plants - 2877; Viruses - 1; Other Eukaryotes - 20190 (source: NCBI BLink). & (p31687|4cl2_soybn : 192.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) (Clone 4CL16) - Glycine max (Soybean) & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"MA_7175699g0010","No alias","Picea abies","(at1g53240 : 204.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (q43744|mdhm_brana : 199.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Brassica napus (Rape) & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"MA_74117g0010","No alias","Picea abies","(at2g16630 : 131.0) Pollen Ole e 1 allergen and extensin family protein; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"MA_76199g0010","No alias","Picea abies","(at1g01580 : 403.0) Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface.  It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism.  Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals.  Its transcription is regulated by FIT1.; ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"MA_76962g0010","No alias","Picea abies","(at1g60030 : 674.0) nucleobase-ascorbate transporter 7 (NAT7); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 8 (TAIR:AT1G10540.1); Has 9221 Blast hits to 9205 proteins in 1877 species: Archae - 67; Bacteria - 7547; Metazoa - 349; Fungi - 126; Plants - 456; Viruses - 1; Other Eukaryotes - 675 (source: NCBI BLink). & (reliability: 1348.0) &  (original description: no original description)","protein_coding"
"MA_7993g0010","No alias","Picea abies","(at5g46180 : 355.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39566|gsa_chlre : 85.5) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"MA_8414035g0010","No alias","Picea abies","(at1g61800 : 518.0) glucose6-Phosphate/phosphate transporter 2; glucose-6-phosphate/phosphate translocator 2 (GPT2); FUNCTIONS IN: antiporter activity, glucose-6-phosphate transmembrane transporter activity; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2231 Blast hits to 2230 proteins in 287 species: Archae - 2; Bacteria - 36; Metazoa - 463; Fungi - 366; Plants - 1109; Viruses - 0; Other Eukaryotes - 255 (source: NCBI BLink). & (p21727|tpt_pea : 256.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (reliability: 1036.0) &  (original description: no original description)","protein_coding"
"MA_8643g0010","No alias","Picea abies","(at2g44710 : 320.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"MA_87289g0010","No alias","Picea abies","(at2g47900 : 157.0) Member of TLP family; tubby like protein 3 (TLP3); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby-like protein 9 (TAIR:AT3G06380.1). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"MA_91849g0010","No alias","Picea abies","(at2g37970 : 223.0) SOUL-1; FUNCTIONS IN: binding; INVOLVED IN: N-terminal protein myristoylation, red or far-red light signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1); Has 1375 Blast hits to 1375 proteins in 156 species: Archae - 18; Bacteria - 186; Metazoa - 71; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 927 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"MA_9193288g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_92132g0010","No alias","Picea abies","(at3g06720 : 842.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 801.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (reliability: 1684.0) &  (original description: no original description)","protein_coding"
"MA_925263g0010","No alias","Picea abies","(at5g66680 : 241.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"MA_9844312g0010","No alias","Picea abies","(at2g38240 : 217.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to salt stress; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8819 Blast hits to 8740 proteins in 1012 species: Archae - 0; Bacteria - 1137; Metazoa - 112; Fungi - 1067; Plants - 5036; Viruses - 0; Other Eukaryotes - 1467 (source: NCBI BLink). & (q41452|fls_soltu : 191.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Solanum tuberosum (Potato) & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"Mp1g00630.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g00700.1","No alias","Marchantia polymorpha","polyamine oxidase (PAO5)","protein_coding"
"Mp1g00830.1","No alias","Marchantia polymorpha","component DGL1 of oligosaccharyl transferase (OST) complex","protein_coding"
"Mp1g00920.1","No alias","Marchantia polymorpha","Calmodulin-related protein OS=Petunia hybrida (sp|p27164|calm3_pethy : 227.0)","protein_coding"
"Mp1g02060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g04340.1","No alias","Marchantia polymorpha","UAP56-associated component UIEF of TREX/THO mRNP trafficking complex","protein_coding"
"Mp1g07490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g09840.1","No alias","Marchantia polymorpha","alpha-1,2-mannosyltransferase (ALG11)","protein_coding"
"Mp1g11580.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g13760.1","No alias","Marchantia polymorpha","XPO3/XPOT nucleocytoplasmic export karyopherin","protein_coding"
"Mp1g14280.1","No alias","Marchantia polymorpha","golgin (GRIP)","protein_coding"
"Mp1g14390.1","No alias","Marchantia polymorpha","component GID5 of ubiquitin protein ligase complex","protein_coding"
"Mp1g16350.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g16900.1","No alias","Marchantia polymorpha","3-beta hydroxysteroid dehydrogenase. ER-associated protein (Reticulon)","protein_coding"
"Mp1g18860.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 132.7) & Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 OS=Arabidopsis thaliana (sp|q9sxs7|cysd2_arath : 132.0)","protein_coding"
"Mp1g18960.1","No alias","Marchantia polymorpha","membrin group Qb-type SNARE protein","protein_coding"
"Mp1g19170.1","No alias","Marchantia polymorpha","EARP-specific component Syndetin-like of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Mp1g22490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g25000.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26230.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g02540.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g03160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g03200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g06430.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g09040.1","No alias","Marchantia polymorpha","pyrrolidone-carboxylate peptidase","protein_coding"
"Mp2g11050.1","No alias","Marchantia polymorpha","SEC22-type R-type SNARE longin protein","protein_coding"
"Mp2g12550.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g13410.1","No alias","Marchantia polymorpha","sterol delta8-delta7 isomerase","protein_coding"
"Mp2g13900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g15790.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g18930.1","No alias","Marchantia polymorpha","GDP-D-mannose pyrophosphohydrolase","protein_coding"
"Mp2g21730.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g22060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g24180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g01840.1","No alias","Marchantia polymorpha","prolyl hydroxylase","protein_coding"
"Mp3g06190.1","No alias","Marchantia polymorpha","transcription factor (PLATZ)","protein_coding"
"Mp3g08540.1","No alias","Marchantia polymorpha","Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana (sp|q8l751|orp1c_arath : 862.0)","protein_coding"
"Mp3g11520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g19370.1","No alias","Marchantia polymorpha","monosaccharide transporter (STP)","protein_coding"
"Mp4g07550.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g08260.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana (sp|q8w4r3|rh30_arath : 117.0)","protein_coding"
"Mp4g08850.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g11120.1","No alias","Marchantia polymorpha","Probable 2-oxoglutarate-dependent dioxygenase At3g50210 OS=Arabidopsis thaliana (sp|q84mb6|diox2_arath : 325.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 106.5)","protein_coding"
"Mp4g18200.1","No alias","Marchantia polymorpha","component ORC1 of origin recognition complex","protein_coding"
"Mp4g19750.1","No alias","Marchantia polymorpha","chaperone (Hsp90)","protein_coding"
"Mp5g05490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g08630.1","No alias","Marchantia polymorpha","dihydopyrimidine aminohydrolase","protein_coding"
"Mp5g10550.1","No alias","Marchantia polymorpha","O-fucosyltransferase 30 OS=Arabidopsis thaliana (sp|q1jpm5|oft30_arath : 191.0)","protein_coding"
"Mp5g13260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g13500.1","No alias","Marchantia polymorpha","component RRP42 of exosome EXO9 core complex","protein_coding"
"Mp5g14040.1","No alias","Marchantia polymorpha","GPN2 RNA polymerase-II nuclear import factor","protein_coding"
"Mp5g15870.1","No alias","Marchantia polymorpha","phosphatidylinositol synthase","protein_coding"
"Mp5g18080.1","No alias","Marchantia polymorpha","meiotic crossover pachytene checkpoint protein (PCH2/CRC1)","protein_coding"
"Mp5g22520.1","No alias","Marchantia polymorpha","Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 98.6)","protein_coding"
"Mp6g05400.1","No alias","Marchantia polymorpha","component VPS51/UNH of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Mp6g05570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g11350.1","No alias","Marchantia polymorpha","Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 259.4)","protein_coding"
"Mp6g12000.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica (sp|q0e2z7|rh41_orysj : 478.0)","protein_coding"
"Mp6g12970.1","No alias","Marchantia polymorpha","RING-HC-class E3 ligase","protein_coding"
"Mp6g13150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g13800.1","No alias","Marchantia polymorpha","formylglycinamidine RN synthase","protein_coding"
"Mp7g00410.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g11980.1","No alias","Marchantia polymorpha","Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana (sp|q9fln8|iamt1_arath : 240.0) & Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 139.4)","protein_coding"
"Mp7g13590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g14560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g16750.1","No alias","Marchantia polymorpha","18.5 kDa class I heat shock protein OS=Glycine max (sp|p05478|hsp16_soybn : 128.0)","protein_coding"
"Mp7g17770.1","No alias","Marchantia polymorpha","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)","protein_coding"
"Mp7g18380.1","No alias","Marchantia polymorpha","subunit H of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Mp8g01790.1","No alias","Marchantia polymorpha","ssDNA-binding protein (OSB)","protein_coding"
"Mp8g03710.1","No alias","Marchantia polymorpha","nucleotide sugar transporter (CSTLP)","protein_coding"
"Mp8g04250.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07760.1","No alias","Marchantia polymorpha","copper cation channel (COPT). copper transporter (COPT)","protein_coding"
"Mp8g10750.1","No alias","Marchantia polymorpha","F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 199.0)","protein_coding"
"Mp8g16310.1","No alias","Marchantia polymorpha","peroxisomal long-chain acyl-CoA synthetase","protein_coding"
"Potri.003G094600","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Potri.004G157900","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Potri.005G127000","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Potri.006G161300","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Potri.007G031000","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Potri.009G112800","No alias","Populus trichocarpa","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding"
"Pp1s100_63V6","No alias","Physcomitrella patens","protein binding zinc ion binding","protein_coding"
"Pp1s116_157V6","No alias","Physcomitrella patens","glycosyltransferase family 20 protein","protein_coding"
"Pp1s12_41V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s133_56V6","No alias","Physcomitrella patens","auxin response factor 8","protein_coding"
"Pp1s135_121V6","No alias","Physcomitrella patens","K15I22.4; leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s141_73V6","No alias","Physcomitrella patens","leucine-rich repeat transmembrane protein","protein_coding"
"Pp1s141_97V6","No alias","Physcomitrella patens","myb family transcription factor","protein_coding"
"Pp1s144_100V6","No alias","Physcomitrella patens","exocyst complex component expressed","protein_coding"
"Pp1s14_89V6","No alias","Physcomitrella patens","coatomer protein epsilon subunit family protein cope family protein","protein_coding"
"Pp1s150_137V6","No alias","Physcomitrella patens","armadillo beta-catenin repeat family protein","protein_coding"
"Pp1s158_86V6","No alias","Physcomitrella patens","proteophosphoglycan ppg1 [Leishmania major]","protein_coding"
"Pp1s15_298V6","No alias","Physcomitrella patens","coatomer protein gamma-subunit","protein_coding"
"Pp1s164_16V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s171_14V6","No alias","Physcomitrella patens","subfamily member 13","protein_coding"
"Pp1s173_19V6","No alias","Physcomitrella patens","dek1 (defective kernel 1) calcium-dependent cysteine-type endopeptidase cysteine-type endopeptidase","protein_coding"
"Pp1s173_75V6","No alias","Physcomitrella patens","MDF20.29; NOI protein, nitrate-induced [Arabidopsis thaliana]","protein_coding"
"Pp1s186_40V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s18_23V6","No alias","Physcomitrella patens","acetyl- biotin carboxylase","protein_coding"
"Pp1s193_76V6","No alias","Physcomitrella patens","sentrin sumo-specific","protein_coding"
"Pp1s198_16V6","No alias","Physcomitrella patens","contains EST C28646(C61919) similar to Arabidopsis thaliana chromosome1,At1g27340 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s20_351V6","No alias","Physcomitrella patens","phenylalanyl-trnabeta subunit","protein_coding"
"Pp1s212_7V6","No alias","Physcomitrella patens","atp-dependent clpproteolytic subunit","protein_coding"
"Pp1s236_54V6","No alias","Physcomitrella patens","PREDICTED: hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s238_75V6","No alias","Physcomitrella patens","actin related protein","protein_coding"
"Pp1s239_19V6","No alias","Physcomitrella patens","endoplasmic reticulum","protein_coding"
"Pp1s241_91V6","No alias","Physcomitrella patens","beach domain-containing protein","protein_coding"
"Pp1s248_7V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s251_39V6","No alias","Physcomitrella patens","mevalonate kinase","protein_coding"
"Pp1s269_44V6","No alias","Physcomitrella patens","nodal modulator 2","protein_coding"
"Pp1s276_96V6","No alias","Physcomitrella patens","coatomer protein gamma-subunit","protein_coding"
"Pp1s28_161V6","No alias","Physcomitrella patens","cell division control protein 50","protein_coding"
"Pp1s30_191V6","No alias","Physcomitrella patens","F12C20.4; ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s30_61V6","No alias","Physcomitrella patens","LOC490213; similar to Zinc finger protein 265 (Zinc finger, splicing) [Canis familiaris]","protein_coding"
"Pp1s32_330V6","No alias","Physcomitrella patens","ccr4-not transcription complex","protein_coding"
"Pp1s34_208V6","No alias","Physcomitrella patens","fad linked oxidase domain protein","protein_coding"
"Pp1s356_3V6","No alias","Physcomitrella patens","nmda receptor regulated 1","protein_coding"
"Pp1s359_27V6","No alias","Physcomitrella patens","F3C22.10; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s367_3V6","No alias","Physcomitrella patens","exosome complex exonuclease rrp41","protein_coding"
"Pp1s387_51V6","No alias","Physcomitrella patens","aspartic proteinase asp1","protein_coding"
"Pp1s38_187V6","No alias","Physcomitrella patens","T5K6.80; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s38_28V6","No alias","Physcomitrella patens","CG5262; CG5262 gene product from transcript CG5262-RA [Drosophila melanogaster]","protein_coding"
"Pp1s412_13V6","No alias","Physcomitrella patens","MSF19.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s432_19V6","No alias","Physcomitrella patens","zgc:55705 [Danio rerio]","protein_coding"
"Pp1s43_170V6","No alias","Physcomitrella patens","T18B16.90; early-responsive to dehydration stress protein (ERD3) [Arabidopsis thaliana]","protein_coding"
"Pp1s450_4V6","No alias","Physcomitrella patens","phospholipase c","protein_coding"
"Pp1s45_277V6","No alias","Physcomitrella patens","two pore calcium channel","protein_coding"
"Pp1s52_243V6","No alias","Physcomitrella patens","F20L16.120; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s55_159V6","No alias","Physcomitrella patens","pimt2 (protein-l-isoaspartate methyltransferase 2) protein-l-isoaspartate (d-aspartate) o-methyltransferase","protein_coding"
"Pp1s61_315V6","No alias","Physcomitrella patens","yth domain containing 2","protein_coding"
"Pp1s73_47V6","No alias","Physcomitrella patens","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kdasubunit precursor","protein_coding"
"Pp1s87_178V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s88_125V6","No alias","Physcomitrella patens","sphingosine-1-phosphate lyase","protein_coding"
"Pp1s93_12V6","No alias","Physcomitrella patens","MDC12.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s9_317V6","No alias","Physcomitrella patens","acylamino-acid-releasing enzyme","protein_coding"
"Pp1s9_31V6","No alias","Physcomitrella patens","No description available","protein_coding"
"PSME_00000248-RA","No alias","Pseudotsuga menziesii","(at3g13080 : 736.0) encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 3 (MRP3); FUNCTIONS IN: chlorophyll catabolite transmembrane transporter activity, ATPase activity, coupled to transmembrane movement of substances, glutathione S-conjugate-exporting ATPase activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: apoplast, vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 106.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1472.0) &  (original description: no original description)","protein_coding"
"PSME_00000493-RA","No alias","Pseudotsuga menziesii","(at2g30730 : 82.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G30740.1); Has 109750 Blast hits to 108623 proteins in 4410 species: Archae - 102; Bacteria - 13321; Metazoa - 40082; Fungi - 8930; Plants - 31424; Viruses - 300; Other Eukaryotes - 15591 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"PSME_00000810-RA","No alias","Pseudotsuga menziesii","(at1g12580 : 156.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (p53683|cdpk2_orysa : 137.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00000865-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001582-RA","No alias","Pseudotsuga menziesii","(q6k9n6|sucb_orysa : 650.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (at2g20420 : 639.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (reliability: 1278.0) &  (original description: no original description)","protein_coding"
"PSME_00002442-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 617.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"PSME_00002612-RA","No alias","Pseudotsuga menziesii","(at5g59440 : 140.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of  263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00002963-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00003626-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00003643-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004000-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004042-RA","No alias","Pseudotsuga menziesii","(at5g23810 : 115.0) Encodes nonfunctional amino acid transporter.  AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.; amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00004944-RA","No alias","Pseudotsuga menziesii","(at1g04600 : 83.6) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"PSME_00005310-RA","No alias","Pseudotsuga menziesii","(p52711|cbp23_horvu : 387.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (at4g30610 : 385.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1.  It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"PSME_00006887-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00007210-RA","No alias","Pseudotsuga menziesii","(q949g3|pdr1_nicpl : 301.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g15520 : 281.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00007477-RA","No alias","Pseudotsuga menziesii","(at5g67270 : 285.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"PSME_00007856-RA","No alias","Pseudotsuga menziesii","(at1g71060 : 181.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G77360.1); Has 34236 Blast hits to 11484 proteins in 290 species: Archae - 3; Bacteria - 45; Metazoa - 348; Fungi - 482; Plants - 32361; Viruses - 0; Other Eukaryotes - 997 (source: NCBI BLink). & (q76c99|rf1_orysa : 111.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00008516-RA","No alias","Pseudotsuga menziesii","(at4g35785 : 94.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: ribonucleoprotein complex, chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G07350.1). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00008550-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 310.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00008771-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009035-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 158.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"PSME_00009291-RA","No alias","Pseudotsuga menziesii","(at1g07220 : 477.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT5G23850.1); Has 670 Blast hits to 661 proteins in 130 species: Archae - 0; Bacteria - 41; Metazoa - 224; Fungi - 131; Plants - 246; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 954.0) &  (original description: no original description)","protein_coding"
"PSME_00009945-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 422.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 415.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00010536-RA","No alias","Pseudotsuga menziesii","(at1g75950 : 156.0) SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which  provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene  to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.; S phase kinase-associated protein 1 (SKP1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: negative regulation of DNA recombination, response to cadmium ion, mitosis, male meiosis, ubiquitin-dependent protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein (TAIR:AT5G42190.1); Has 1455 Blast hits to 1451 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 179; Plants - 538; Viruses - 11; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00010607-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010721-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 326.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 322.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"PSME_00011206-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 129.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00011428-RA","No alias","Pseudotsuga menziesii","(at4g13345 : 305.0) maternal effect embryo arrest 55 (MEE55); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G24460.1); Has 836 Blast hits to 765 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 450; Fungi - 174; Plants - 143; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (p46466|prs4_orysa : 159.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"PSME_00011430-RA","No alias","Pseudotsuga menziesii","(at1g69040 : 264.0) ACT-domain containing protein involved in feedback regulation of amino acid metabolism; ACT domain repeat 4 (ACR4); FUNCTIONS IN: amino acid binding; INVOLVED IN: regulation of cellular amino acid metabolic process, response to cytokinin stimulus; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 5 (TAIR:AT2G03730.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"PSME_00011470-RA","No alias","Pseudotsuga menziesii","(at5g07990 : 131.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (o81973|c93a3_soybn : 131.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00011505-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011536-RA","No alias","Pseudotsuga menziesii","(at5g05780 : 507.0) Encodes a putative 26S proteasome subunit RPN8a.  The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity.; RP non-ATPase subunit 8A (RPN8A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process, leaf morphogenesis; LOCATED IN: proteasome complex, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2). & (reliability: 1014.0) &  (original description: no original description)","protein_coding"
"PSME_00011701-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011815-RA","No alias","Pseudotsuga menziesii","(at5g24550 : 399.0) beta glucosidase 32 (BGLU32); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 31 (TAIR:AT5G24540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 339.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"PSME_00011975-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 151.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"PSME_00012180-RA","No alias","Pseudotsuga menziesii","(at1g04510 : 699.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19.  Associated with the MOS4-Associated Complex (MAC).  Involved in plant innate immunity.; MOS4-associated  complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated  complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93107|pf20_chlre : 93.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1358.0) &  (original description: no original description)","protein_coding"
"PSME_00012533-RA","No alias","Pseudotsuga menziesii","(at3g57490 : 398.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 8574 Blast hits to 8565 proteins in 2893 species: Archae - 263; Bacteria - 5125; Metazoa - 697; Fungi - 227; Plants - 154; Viruses - 0; Other Eukaryotes - 2108 (source: NCBI BLink). & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"PSME_00012812-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012994-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00013111-RA","No alias","Pseudotsuga menziesii","(at5g05540 : 304.0) small RNA degrading nuclease 2 (SDN2); FUNCTIONS IN: exonuclease activity, nucleic acid binding; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease (InterPro:IPR006055), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); BEST Arabidopsis thaliana protein match is: small RNA degrading nuclease 3 (TAIR:AT5G67240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"PSME_00013615-RA","No alias","Pseudotsuga menziesii","(at1g36050 : 336.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"PSME_00014266-RA","No alias","Pseudotsuga menziesii","(p38661|pdia6_medsa : 492.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 477.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (reliability: 954.0) &  (original description: no original description)","protein_coding"
"PSME_00014533-RA","No alias","Pseudotsuga menziesii","(at4g01130 : 285.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 249.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"PSME_00014628-RA","No alias","Pseudotsuga menziesii","(at3g48080 : 97.8) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"PSME_00014675-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00015508-RA","No alias","Pseudotsuga menziesii","(at4g38640 : 259.0) Plasma-membrane choline transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00015736-RA","No alias","Pseudotsuga menziesii","(at4g38790 : 207.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9slz0|pepck_maize : 83.6) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00016149-RA","No alias","Pseudotsuga menziesii",""(at1g67110 : 484.0) member of CYP709A; ""cytochrome P450, family 735, subfamily A, polypeptide 2"" (CYP735A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 33174 Blast hits to 33061 proteins in 1685 species: Archae - 70; Bacteria - 4727; Metazoa - 11578; Fungi - 6785; Plants - 8543; Viruses - 6; Other Eukaryotes - 1465 (source: NCBI BLink). & (q05047|c72a1_catro : 303.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 968.0) &  (original description: no original description)"","protein_coding"
"PSME_00016153-RA","No alias","Pseudotsuga menziesii","(at5g63840 : 355.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"PSME_00017045-RA","No alias","Pseudotsuga menziesii","(at1g70080 : 90.9) Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00017269-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 508.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 499.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"PSME_00017292-RA","No alias","Pseudotsuga menziesii","(at1g53000 : 358.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"PSME_00017503-RA","No alias","Pseudotsuga menziesii","(p48599|if4e1_orysa : 198.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Oryza sativa (Rice) & (at4g18040 : 188.0) eIF4E protein.  The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00017612-RA","No alias","Pseudotsuga menziesii","(at3g59710 : 192.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 60289 Blast hits to 60264 proteins in 3086 species: Archae - 599; Bacteria - 42094; Metazoa - 4067; Fungi - 2569; Plants - 1993; Viruses - 0; Other Eukaryotes - 8967 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00017662-RA","No alias","Pseudotsuga menziesii","(at5g56300 : 246.0) A member of the Arabidopsis SABATH methyltransferase gene family.  Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs).  Expressed most highly in the siliques during seed development.; gibberellic acid methyltransferase 2 (GAMT2); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.1); Has 919 Blast hits to 907 proteins in 123 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 143.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 492.0) &  (original description: no original description)","protein_coding"
"PSME_00017678-RA","No alias","Pseudotsuga menziesii","(at1g30520 : 100.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00017960-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00018353-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 441.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 429.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"PSME_00018540-RA","No alias","Pseudotsuga menziesii","(at5g07280 : 353.0) Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther.; EXCESS MICROSPOROCYTES1 (EMS1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 243.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"PSME_00018674-RA","No alias","Pseudotsuga menziesii","(at5g01100 : 115.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G54100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00018705-RA","No alias","Pseudotsuga menziesii","(at5g10240 : 947.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (p31752|asns_aspof : 941.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (reliability: 1894.0) &  (original description: no original description)","protein_coding"
"PSME_00018917-RA","No alias","Pseudotsuga menziesii","(at2g33870 : 213.0) RAB GTPase homolog A1H (ArRABA1h); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1I (TAIR:AT1G28550.1); Has 27076 Blast hits to 27025 proteins in 750 species: Archae - 25; Bacteria - 157; Metazoa - 14072; Fungi - 4066; Plants - 2934; Viruses - 20; Other Eukaryotes - 5802 (source: NCBI BLink). & (p40393|ric2_orysa : 209.0) Ras-related protein RIC2 - Oryza sativa (Rice) & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"PSME_00019249-RA","No alias","Pseudotsuga menziesii","(at3g25560 : 181.0) NSP-interacting kinase 2 (NIK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 1 (TAIR:AT5G16000.1). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00019538-RA","No alias","Pseudotsuga menziesii","(at5g16860 : 168.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00019816-RA","No alias","Pseudotsuga menziesii","(at3g13770 : 108.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00019895-RA","No alias","Pseudotsuga menziesii","(at1g53240 : 492.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 488.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (reliability: 984.0) &  (original description: no original description)","protein_coding"
"PSME_00019910-RA","No alias","Pseudotsuga menziesii","(at3g12270 : 511.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"PSME_00020246-RA","No alias","Pseudotsuga menziesii","(at5g08580 : 406.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 812.0) &  (original description: no original description)","protein_coding"
"PSME_00020455-RA","No alias","Pseudotsuga menziesii","(at1g66880 : 174.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38210.1); Has 129213 Blast hits to 127053 proteins in 4833 species: Archae - 128; Bacteria - 14675; Metazoa - 47420; Fungi - 11551; Plants - 35229; Viruses - 624; Other Eukaryotes - 19586 (source: NCBI BLink). & (o24585|cri4_maize : 108.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00020471-RA","No alias","Pseudotsuga menziesii","(q9m3v8|rs6_aspof : 393.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 381.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00020717-RA","No alias","Pseudotsuga menziesii","(p80471|lipc_soltu : 199.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g04020 : 191.0) Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.; fibrillin (FIB); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photoinhibition, response to cold, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 435 Blast hits to 434 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00020996-RA","No alias","Pseudotsuga menziesii","(at3g60550 : 220.0) cyclin p3;2 (CYCP3;2); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922); BEST Arabidopsis thaliana protein match is: cyclin p3;1 (TAIR:AT2G45080.1); Has 1360 Blast hits to 1354 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 236; Fungi - 630; Plants - 217; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00021100-RA","No alias","Pseudotsuga menziesii","(at1g04120 : 247.0) encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.; multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"PSME_00021353-RA","No alias","Pseudotsuga menziesii","(at5g18280 : 494.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p52914|ntpa_pea : 386.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00021447-RA","No alias","Pseudotsuga menziesii","(at5g65380 : 312.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G44050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) &  (original description: no original description)","protein_coding"
"PSME_00021929-RA","No alias","Pseudotsuga menziesii","(at5g65280 : 329.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00022268-RA","No alias","Pseudotsuga menziesii","(at5g67480 : 166.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00022554-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022738-RA","No alias","Pseudotsuga menziesii","(at1g04170 : 239.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"PSME_00022833-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 185.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00022911-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023023-RA","No alias","Pseudotsuga menziesii","(q42908|pmgi_mescr : 962.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Mesembryanthemum crystallinum (Common ice plant) & (at1g09780 : 928.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink). & (reliability: 1856.0) &  (original description: no original description)","protein_coding"
"PSME_00023233-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 164.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00023331-RA","No alias","Pseudotsuga menziesii","(at2g19130 : 145.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (p07761|slsg6_braol : 113.0) S-locus-specific glycoprotein S6 precursor (SLSG-6) - Brassica oleracea (Wild cabbage) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00025129-RA","No alias","Pseudotsuga menziesii","(at2g13600 : 192.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00025429-RA","No alias","Pseudotsuga menziesii","(at5g42090 : 101.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00025562-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 481.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00025685-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025967-RA","No alias","Pseudotsuga menziesii","(p93508|calr_ricco : 630.0) Calreticulin precursor - Ricinus communis (Castor bean) & (at1g09210 : 607.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"PSME_00026102-RA","No alias","Pseudotsuga menziesii","(at1g68750 : 177.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (q6r2v6|capp2_chlre : 141.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00026188-RA","No alias","Pseudotsuga menziesii","(at4g37080 : 202.0) Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G42690.2). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"PSME_00026405-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00026425-RA","No alias","Pseudotsuga menziesii","(at4g02280 : 838.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (o24301|sus2_pea : 838.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (reliability: 1676.0) &  (original description: no original description)","protein_coding"
"PSME_00027089-RA","No alias","Pseudotsuga menziesii","(at4g26910 : 143.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT5G55070.1); Has 24826 Blast hits to 20752 proteins in 2368 species: Archae - 154; Bacteria - 14691; Metazoa - 760; Fungi - 487; Plants - 406; Viruses - 4; Other Eukaryotes - 8324 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00027273-RA","No alias","Pseudotsuga menziesii","(at5g42090 : 132.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00028439-RA","No alias","Pseudotsuga menziesii","(at5g67480 : 229.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00028740-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00029145-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 339.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 219.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00029623-RA","No alias","Pseudotsuga menziesii","(at4g02050 : 157.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (q10710|sta_ricco : 152.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00029950-RA","No alias","Pseudotsuga menziesii","(at5g42190 : 192.0) Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.; E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: S phase kinase-associated protein 1 (TAIR:AT1G75950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00030011-RA","No alias","Pseudotsuga menziesii","(at1g70060 : 265.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00030403-RA","No alias","Pseudotsuga menziesii","(at4g11010 : 133.0) nucleoside diphosphate kinase 3 (ndpk3), located to the inter-membrane space in mitochondria; nucleoside diphosphate kinase 3 (NDPK3); FUNCTIONS IN: nucleoside diphosphate kinase activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8rxa8|ndk4_spiol : 131.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00030556-RA","No alias","Pseudotsuga menziesii","(at3g25100 : 136.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00030823-RA","No alias","Pseudotsuga menziesii","(at3g14920 : 538.0) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (InterPro:IPR021102); BEST Arabidopsis thaliana protein match is: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein (TAIR:AT5G05480.1); Has 261 Blast hits to 247 proteins in 94 species: Archae - 30; Bacteria - 27; Metazoa - 0; Fungi - 111; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"PSME_00031604-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031621-RA","No alias","Pseudotsuga menziesii","(o48923|c71da_soybn : 342.0) Cytochrome P450 71D10 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g36220 : 334.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"PSME_00032000-RA","No alias","Pseudotsuga menziesii","(at1g09560 : 215.0) germin-like protein (GLP5); germin-like protein 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to cold; LOCATED IN: cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 10 (TAIR:AT3G62020.1); Has 1766 Blast hits to 1756 proteins in 200 species: Archae - 0; Bacteria - 219; Metazoa - 1; Fungi - 67; Plants - 1458; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (q9spv5|nec1_nicpl : 211.0) Nectarin-1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00032197-RA","No alias","Pseudotsuga menziesii","(at1g20620 : 370.0) Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.; catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p49315|cata1_nicpl : 370.0) Catalase isozyme 1 (EC 1.11.1.6) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 740.0) &  (original description: no original description)","protein_coding"
"PSME_00032289-RA","No alias","Pseudotsuga menziesii","(at4g19050 : 81.3) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G45510.2); Has 34356 Blast hits to 17814 proteins in 759 species: Archae - 28; Bacteria - 2387; Metazoa - 7116; Fungi - 505; Plants - 22424; Viruses - 39; Other Eukaryotes - 1857 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"PSME_00032307-RA","No alias","Pseudotsuga menziesii","(at3g46790 : 186.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00032547-RA","No alias","Pseudotsuga menziesii","(at5g66840 : 94.7) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"PSME_00032549-RA","No alias","Pseudotsuga menziesii","(q8w013|comt1_catro : 271.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 262.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay.  AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00032679-RA","No alias","Pseudotsuga menziesii","(at1g11530 : 103.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00032781-RA","No alias","Pseudotsuga menziesii","(p35694|bru1_soybn : 87.8) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at5g13870 : 86.7) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"PSME_00032840-RA","No alias","Pseudotsuga menziesii","(at5g15750 : 163.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"PSME_00033471-RA","No alias","Pseudotsuga menziesii","(at3g09820 : 137.0) Involved in the salvage synthesis of                      adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49923|adk_phypa : 123.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00033814-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033987-RA","No alias","Pseudotsuga menziesii","(at5g56300 : 196.0) A member of the Arabidopsis SABATH methyltransferase gene family.  Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs).  Expressed most highly in the siliques during seed development.; gibberellic acid methyltransferase 2 (GAMT2); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.1); Has 919 Blast hits to 907 proteins in 123 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 122.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00034054-RA","No alias","Pseudotsuga menziesii","(at1g62200 : 193.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8090 Blast hits to 7669 proteins in 1476 species: Archae - 0; Bacteria - 3978; Metazoa - 789; Fungi - 491; Plants - 2227; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00034408-RA","No alias","Pseudotsuga menziesii","(at3g03790 : 243.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (q943f3|rl18a_orysa : 119.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00034562-RA","No alias","Pseudotsuga menziesii","(at1g42540 : 94.7) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.3 (GLR3.3); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.6 (TAIR:AT3G51480.1); Has 6567 Blast hits to 6430 proteins in 489 species: Archae - 28; Bacteria - 758; Metazoa - 4571; Fungi - 0; Plants - 644; Viruses - 2; Other Eukaryotes - 564 (source: NCBI BLink). & (q7xp59|glr31_orysa : 89.7) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"PSME_00035021-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035320-RA","No alias","Pseudotsuga menziesii","(at1g71120 : 98.6) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"PSME_00035445-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 217.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"PSME_00036025-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00036394-RA","No alias","Pseudotsuga menziesii","(at5g57655 : 108.0) xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase, bacterial type (InterPro:IPR013452), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2515 Blast hits to 2515 proteins in 856 species: Archae - 2; Bacteria - 1880; Metazoa - 11; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (q40082|xyla_horvu : 97.1) Xylose isomerase (EC 5.3.1.5) - Hordeum vulgare (Barley) & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00036416-RA","No alias","Pseudotsuga menziesii","(at4g14330 : 94.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: phragmoplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 1 (TAIR:AT4G21270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00036772-RA","No alias","Pseudotsuga menziesii","(p48419|c75a3_pethy : 602.0) Flavonoid 3',5'-hydroxylase 2 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A3) (CYPLXXVA3) - Petunia hybrida (Petunia) & (at5g07990 : 421.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"PSME_00037753-RA","No alias","Pseudotsuga menziesii","(q8lkz1|nork_pea : 96.3) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at2g28970 : 94.7) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28990.1); Has 169810 Blast hits to 124514 proteins in 4517 species: Archae - 105; Bacteria - 13883; Metazoa - 45515; Fungi - 10149; Plants - 80466; Viruses - 403; Other Eukaryotes - 19289 (source: NCBI BLink). & (reliability: 171.0) &  (original description: no original description)","protein_coding"
"PSME_00037810-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 403.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (q09131|ppaf_soybn : 162.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"PSME_00038640-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 191.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00038954-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 707.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 704.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1414.0) &  (original description: no original description)","protein_coding"
"PSME_00039826-RA","No alias","Pseudotsuga menziesii","(at2g01140 : 634.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (q40677|alfc_orysa : 608.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"PSME_00040791-RA","No alias","Pseudotsuga menziesii","(at1g52880 : 219.0) Transcription factor with a NAC domain.  Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.; NO APICAL MERISTEM (NAM); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein  2 (TAIR:AT3G15510.1); Has 3040 Blast hits to 3032 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3034; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q52qh4|nac68_orysa : 182.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"PSME_00041016-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 438.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 434.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"PSME_00041261-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 232.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00041304-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 243.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00041323-RA","No alias","Pseudotsuga menziesii","(at1g28440 : 899.0) HAESA-like 1 (HSL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT4G28490.1); Has 214855 Blast hits to 132793 proteins in 4138 species: Archae - 139; Bacteria - 23060; Metazoa - 65756; Fungi - 10225; Plants - 90032; Viruses - 401; Other Eukaryotes - 25242 (source: NCBI BLink). & (p93194|rpk1_iponi : 512.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1798.0) &  (original description: no original description)","protein_coding"
"PSME_00042128-RA","No alias","Pseudotsuga menziesii","(at3g21420 : 403.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (q07512|fls_pethy : 197.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"PSME_00042212-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 142.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83948|pme3_citsi : 84.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00042220-RA","No alias","Pseudotsuga menziesii","(at5g55230 : 204.0) Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules  in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to  the spindle appears to be regulated by a phosphorylation sensitive  switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.; microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00042448-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042452-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042576-RA","No alias","Pseudotsuga menziesii","(at3g21510 : 184.0) Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs).  AHPs function as redundant positive regulators of cytokinin signaling.  Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).; histidine-containing phosphotransmitter 1 (AHP1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 358 Blast hits to 357 proteins in 69 species: Archae - 2; Bacteria - 42; Metazoa - 0; Fungi - 41; Plants - 268; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (q6vak4|hp1_orysa : 112.0) Histidine-containing phosphotransfer protein 1 (OsHP1) - Oryza sativa (Rice) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00042612-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042787-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042797-RA","No alias","Pseudotsuga menziesii","(p52885|sar1_tobac : 142.0) GTP-binding protein SAR1 - Nicotiana tabacum (Common tobacco) & (at3g62560 : 139.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: secretion-associated RAS super family 2 (TAIR:AT4G02080.1); Has 6828 Blast hits to 6826 proteins in 379 species: Archae - 2; Bacteria - 48; Metazoa - 3250; Fungi - 1258; Plants - 1101; Viruses - 0; Other Eukaryotes - 1169 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00043102-RA","No alias","Pseudotsuga menziesii","(at1g76540 : 206.0) Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle.  Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling.; cyclin-dependent kinase B2;1 (CDKB2;1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;2 (TAIR:AT1G20930.1); Has 111951 Blast hits to 110345 proteins in 2908 species: Archae - 97; Bacteria - 11880; Metazoa - 41997; Fungi - 12251; Plants - 25980; Viruses - 445; Other Eukaryotes - 19301 (source: NCBI BLink). & (q38775|cdc2d_antma : 206.0) Cell division control protein 2 homolog D (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00043195-RA","No alias","Pseudotsuga menziesii","(at5g51550 : 85.5) EXORDIUM like 3 (EXL3); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 398 Blast hits to 397 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"PSME_00045176-RA","No alias","Pseudotsuga menziesii","(at4g11050 : 177.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 148.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00045197-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 351.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 348.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00045302-RA","No alias","Pseudotsuga menziesii","(at3g04610 : 96.7) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00045545-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 248.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"PSME_00045928-RA","No alias","Pseudotsuga menziesii","(at4g34990 : 238.0) Member of the R2R3 factor gene family.; myb domain protein 32 (MYB32); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 7 (TAIR:AT2G16720.1); Has 9023 Blast hits to 8385 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 473; Plants - 6077; Viruses - 3; Other Eukaryotes - 1790 (source: NCBI BLink). & (p20025|myb38_maize : 238.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00046057-RA","No alias","Pseudotsuga menziesii","(at5g40380 : 154.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 105.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00046475-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046527-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046782-RA","No alias","Pseudotsuga menziesii","(at2g32390 : 137.0) Encodes a ionotropic glutamate receptor ortholog, a member of a putative ligand-gated ion channel subunit family; glutamate receptor  3.5 (GLR3.5); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2). & (q7xp59|glr31_orysa : 106.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00047073-RA","No alias","Pseudotsuga menziesii","(at4g10020 : 140.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include:   At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463).  Two copies of HSD1 and HSD4 exist due to a gene duplication event.  In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00047197-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047539-RA","No alias","Pseudotsuga menziesii","(at4g38400 : 147.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A2 (EXLA2); INVOLVED IN: response to cyclopentenone, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A1 (TAIR:AT3G45970.1); Has 1877 Blast hits to 1874 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1869; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q10s70|exla1_orysa : 130.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00047685-RA","No alias","Pseudotsuga menziesii",""(at3g48270 : 139.0) putative cytochrome P450; ""cytochrome P450, family 71, subfamily A, polypeptide 26"" (CYP71A26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1); Has 32796 Blast hits to 32545 proteins in 1644 species: Archae - 46; Bacteria - 3223; Metazoa - 11825; Fungi - 7001; Plants - 9620; Viruses - 3; Other Eukaryotes - 1078 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 133.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 270.0) &  (original description: no original description)"","protein_coding"
"PSME_00048451-RA","No alias","Pseudotsuga menziesii","(at4g23180 : 147.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8lkz1|nork_pea : 90.9) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00049740-RA","No alias","Pseudotsuga menziesii","(at5g20680 : 478.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 16; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 14 (TAIR:AT5G64020.1); Has 1636 Blast hits to 1561 proteins in 93 species: Archae - 0; Bacteria - 11; Metazoa - 58; Fungi - 27; Plants - 1333; Viruses - 7; Other Eukaryotes - 200 (source: NCBI BLink). & (reliability: 956.0) &  (original description: no original description)","protein_coding"
"PSME_00049804-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 134.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00050346-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00051145-RA","No alias","Pseudotsuga menziesii","(at2g14720 : 103.0) encodes a vacuolar sorting receptor; vacuolar sorting receptor 4 (VSR4); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: trans-Golgi network, integral to plasma membrane, vacuole, Golgi transport complex; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vaculolar sorting receptor 3 (TAIR:AT2G14740.2); Has 13354 Blast hits to 5993 proteins in 249 species: Archae - 2; Bacteria - 126; Metazoa - 12130; Fungi - 11; Plants - 500; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink). & (p93484|vsr1_pea : 102.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00051578-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 356.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00052125-RA","No alias","Pseudotsuga menziesii","(at5g65650 : 155.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT4G36660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00052727-RA","No alias","Pseudotsuga menziesii","(p10290|mybc_maize : 194.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at1g22640 : 186.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00053013-RA","No alias","Pseudotsuga menziesii","(q6k215|pip22_orysa : 93.6) Probable aquaporin PIP2.2 (Plasma membrane intrinsic protein 2.2) (OsPIP2.2) - Oryza sativa (Rice) & (at1g01620 : 93.2) a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.; plasma membrane intrinsic protein 1C (PIP1C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, response to salt stress, transport, water transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1;4 (TAIR:AT4G00430.1); Has 10489 Blast hits to 10479 proteins in 2194 species: Archae - 80; Bacteria - 5080; Metazoa - 1452; Fungi - 437; Plants - 2488; Viruses - 2; Other Eukaryotes - 950 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"PSME_00053064-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 248.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"PSME_00053860-RA","No alias","Pseudotsuga menziesii","(at2g44860 : 107.0) Ribosomal protein L24e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988), TRASH (InterPro:IPR011017); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1527 Blast hits to 1527 proteins in 399 species: Archae - 307; Bacteria - 5; Metazoa - 446; Fungi - 310; Plants - 198; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00053884-RA","No alias","Pseudotsuga menziesii","(at4g33270 : 144.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00054186-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 100.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of  the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00054791-RA","No alias","Pseudotsuga menziesii","(at5g10530 : 186.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8l4h4|nork_medtr : 123.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00055029-RA","No alias","Pseudotsuga menziesii","(at2g02560 : 87.0) Arabidopsis thaliana homolog of human  CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"PSME_00055600-RA","No alias","Pseudotsuga menziesii","(at1g49450 : 222.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G18950.1); Has 31816 Blast hits to 17355 proteins in 629 species: Archae - 28; Bacteria - 4541; Metazoa - 11860; Fungi - 7305; Plants - 3928; Viruses - 0; Other Eukaryotes - 4154 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"PSME_00055857-RA","No alias","Pseudotsuga menziesii","(at4g19970 : 138.0) CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT5G44820.1); Has 801 Blast hits to 466 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"PSME_00055917-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 121.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"PSME_00056014-RA","No alias","Pseudotsuga menziesii","(q8s857|h2av2_orysa : 159.0) Probable histone H2A variant 2 - Oryza sativa (Rice) & (at3g54560 : 158.0) Encodes HTA11, a histone H2A protein.; histone H2A 11 (HTA11); FUNCTIONS IN: DNA binding; INVOLVED IN: flower development, detection of temperature stimulus, defense response to bacterium; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 8 (TAIR:AT2G38810.2); Has 3864 Blast hits to 3859 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2525; Fungi - 296; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"Seita.1G081200.1","No alias","Setaria italica ","subunit eta *(CCT7) of CCT chaperonin folding complex","protein_coding"
"Seita.1G113100.1","No alias","Setaria italica ","signal peptidase *(SPP)","protein_coding"
"Seita.1G142200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G147100.1","No alias","Setaria italica ","accessory component *(Sec62) of co-translational insertion system","protein_coding"
"Seita.1G167900.1","No alias","Setaria italica ","E1 UFM ubiquitin-activating enzyme","protein_coding"
"Seita.1G303600.1","No alias","Setaria italica ","BSD-type transcription factor","protein_coding"
"Seita.2G018800.1","No alias","Setaria italica ","histone chaperone *(NASP)","protein_coding"
"Seita.2G081100.1","No alias","Setaria italica ","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"Seita.2G196500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G411600.1","No alias","Setaria italica ","component *(OST1) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.2G413400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G017000.1","No alias","Setaria italica ","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.3G048000.1","No alias","Setaria italica ","component *(mL105) of large mitoribosomal-subunit proteome","protein_coding"
"Seita.3G074800.1","No alias","Setaria italica ","alpha-1,2 mannosidase *(MNS) & EC_3.2 glycosylase","protein_coding"
"Seita.3G099700.1","No alias","Setaria italica ","component *(uL16) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.3G167700.1","No alias","Setaria italica ","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Seita.3G175500.1","No alias","Setaria italica ","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.3G214600.1","No alias","Setaria italica ","G-protein-coupled receptor-like regulator (7TM)","protein_coding"
"Seita.3G216800.1","No alias","Setaria italica ","cysteine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Seita.3G265400.1","No alias","Setaria italica ","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Seita.4G173300.1","No alias","Setaria italica ","transcriptional co-repressor *(ECAP)","protein_coding"
"Seita.5G012900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G015300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G156000.1","No alias","Setaria italica ","component *(eS31) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.5G160100.1","No alias","Setaria italica ","protein disulfide isomerase *(PDI-S) & protein disulfide isomerase *(PDI-A)","protein_coding"
"Seita.5G272600.1","No alias","Setaria italica ","component *(SF3A3) of splicing factor 3A complex","protein_coding"
"Seita.5G301700.1","No alias","Setaria italica ","component *(eS24) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.5G423700.1","No alias","Setaria italica ","component *(HAP6) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.6G025200.1","No alias","Setaria italica ","regulatory component *(RPN12) of 26S proteasome","protein_coding"
"Seita.6G096900.1","No alias","Setaria italica ","ARF-GTPase *(ARFE)","protein_coding"
"Seita.6G104600.1","No alias","Setaria italica ","component *(eL39) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.6G206000.1","No alias","Setaria italica ","histone H3K36 methylation reader *(EML)","protein_coding"
"Seita.7G026700.1","No alias","Setaria italica ","translation termination factor *(eRF3)","protein_coding"
"Seita.7G097800.1","No alias","Setaria italica ","component *(CSN8) of COP9 signalosome complex","protein_coding"
"Seita.7G173600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G067700.1","No alias","Setaria italica ","ubiquitin adaptor protein *(TOL)","protein_coding"
"Seita.8G114100.1","No alias","Setaria italica ","component *(SRP68) of SRP (signal recognition particle) complex","protein_coding"
"Seita.8G124600.1","No alias","Setaria italica ","small subunit *(SAE1) of E1 SUMO ubiquitin-activating enzyme complex","protein_coding"
"Seita.8G222600.1","No alias","Setaria italica ","component *(SKI8/VIP3) of SUPERKILLER regulation complex & component *(VIP3/SKI8) of PAF1C transcription initiation and elongation complex","protein_coding"
"Seita.9G011900.1","No alias","Setaria italica ","component *(COG2) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Seita.9G096300.1","No alias","Setaria italica ","subunit alpha of NAC ribosome-associated chaperone complex","protein_coding"
"Seita.9G124000.1","No alias","Setaria italica ","component *(eL13) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.9G414300.1","No alias","Setaria italica ","component *(eIF2-beta) of eIF2 Met-tRNA binding factor complex","protein_coding"
"Seita.9G489300.1","No alias","Setaria italica ","subunit alpha of class-II glucosidase II complex & EC_3.2 glycosylase","protein_coding"
"Seita.9G555200.1","No alias","Setaria italica ","component *(OST1) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.J030900.1","No alias","Setaria italica ","ER luminal lectin chaperone *(CRT)","protein_coding"
"Sobic.001G012900.2","No alias","Sorghum bicolor ","component *(COG2) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Sobic.001G016500.1","No alias","Sorghum bicolor ","component *(uL22) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.001G070700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G161700.1","No alias","Sorghum bicolor ","EC_3.6 hydrolase acting on acid anhydride & regulatory ATPase *(NSF/SEC18)","protein_coding"
"Sobic.001G220900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G295200.1","No alias","Sorghum bicolor ","nucleoside diphosphate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G374700.2","No alias","Sorghum bicolor ","component *(eS21) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.001G418100.1","No alias","Sorghum bicolor ","UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.001G443200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G455000.1","No alias","Sorghum bicolor ","subunit alpha of class-II glucosidase II complex & EC_3.2 glycosylase","protein_coding"
"Sobic.001G467300.3","No alias","Sorghum bicolor ","component *(eS1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.001G490500.1","No alias","Sorghum bicolor ","component *(COG4) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Sobic.001G520300.1","No alias","Sorghum bicolor ","component *(OST1) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.001G526100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G533500.1","No alias","Sorghum bicolor ","component *(Tim9) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"Sobic.001G540100.1","No alias","Sorghum bicolor ","valine/leucine/isoleucine aminotransferase & valine/leucine/isoleucine aminotransferase & branched-chain aminotransferase *(BCAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.002G070600.1","No alias","Sorghum bicolor ","subunit gamma of cargo adaptor F-subcomplex","protein_coding"
"Sobic.002G074200.1","No alias","Sorghum bicolor ","component *(uS5) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.002G075900.1","No alias","Sorghum bicolor ","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"Sobic.002G090500.1","No alias","Sorghum bicolor ","ER luminal lectin chaperone *(CRT)","protein_coding"
"Sobic.002G135200.1","No alias","Sorghum bicolor ","component *(eL40) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.002G222200.1","No alias","Sorghum bicolor ","protein disulfide isomerase *(PDI-M) & protein disulfide isomerase *(PDI-A)","protein_coding"
"Sobic.002G273800.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.002G293200.1","No alias","Sorghum bicolor ","component *(SPCs3) of SPC endoplasmic signal peptidase complex","protein_coding"
"Sobic.002G312400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G320900.1","No alias","Sorghum bicolor ","phospholipase-A2 *(pPLA2-I))","protein_coding"
"Sobic.002G400151.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G405400.1","No alias","Sorghum bicolor ","UDP-N-acetylglucosamine-phosphate transferase *(ALG7)","protein_coding"
"Sobic.002G407900.1","No alias","Sorghum bicolor ","copper/zinc superoxide dismutase *(CSD) & EC_1.15 oxidoreductase acting on superoxide as acceptor","protein_coding"
"Sobic.003G044400.1","No alias","Sorghum bicolor ","component *(Sm-F) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Sobic.003G196200.1","No alias","Sorghum bicolor ","translation elongation factor *(EF-Ts)","protein_coding"
"Sobic.003G209000.2","No alias","Sorghum bicolor ","subunit g of ATP synthase membrane MF0 subcomplex","protein_coding"
"Sobic.003G252500.2","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & callose synthase","protein_coding"
"Sobic.003G322400.1","No alias","Sorghum bicolor ","component *(eS25) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.003G397900.1","No alias","Sorghum bicolor ","component *(HAP6) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.003G411000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G160700.1","No alias","Sorghum bicolor ","mRNA endoribonuclease *(TSN)","protein_coding"
"Sobic.004G220000.1","No alias","Sorghum bicolor ","adenosine kinase *(ADK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G257800.1","No alias","Sorghum bicolor ","anion channel / anion","protein_coding"
"Sobic.004G337800.1","No alias","Sorghum bicolor ","UDP-glucose glycoprotein glucosyltransferase *(UGGT)","protein_coding"
"Sobic.005G105550.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G110526.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G112100.1","No alias","Sorghum bicolor ","COPI trafficking K/HDEL-signature cargo receptor","protein_coding"
"Sobic.006G002700.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.006G062500.1","No alias","Sorghum bicolor ","membrane-anchored lectin chaperone *(CNX)","protein_coding"
"Sobic.006G095200.2","No alias","Sorghum bicolor ","component *(SPCs2) of SPC endoplasmic signal peptidase complex","protein_coding"
"Sobic.007G117500.1","No alias","Sorghum bicolor ","component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex","protein_coding"
"Sobic.007G173000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G176200.1","No alias","Sorghum bicolor ","regulatory component *(RPN3) of 26S proteasome","protein_coding"
"Sobic.007G184500.1","No alias","Sorghum bicolor ","methionyl aminopeptidase *(MAP2)","protein_coding"
"Sobic.007G184600.2","No alias","Sorghum bicolor ","component *(eL38) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.007G197800.1","No alias","Sorghum bicolor ","component *(eL32) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.007G211700.1","No alias","Sorghum bicolor ","component *(eL31) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.008G003700.1","No alias","Sorghum bicolor ","heavy chain of clathrin triskelion","protein_coding"
"Sobic.008G038100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G067500.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.008G134900.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G129900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G148900.1","No alias","Sorghum bicolor ","anion transporter *(NRT1/PTR)","protein_coding"
"Sobic.009G163800.1","No alias","Sorghum bicolor ","component *(eL36) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.009G201700.1","No alias","Sorghum bicolor ","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.010G008800.1","No alias","Sorghum bicolor ","component *(OST2) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.010G012600.1","No alias","Sorghum bicolor ","regulatory EIN2-stabilizing factor *(MHZ3)","protein_coding"
"Sobic.010G040100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G182200.2","No alias","Sorghum bicolor ","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Sobic.010G210200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G266300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g068200","No alias","Solanum lycopersicum","Elongation defective 1 family protein (AHRD V3.3 *** A0A172CF10_POPTO)","protein_coding"
"Solyc01g091310","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G00090.1)","protein_coding"
"Solyc01g109410","No alias","Solanum lycopersicum","dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit","protein_coding"
"Solyc01g111240","No alias","Solanum lycopersicum","Translocase of chloroplast (AHRD V3.3 *-* A0A0K9PF83_ZOSMR)","protein_coding"
"Solyc01g111470","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061FPD8_THECC)","protein_coding"
"Solyc02g014030","No alias","Solanum lycopersicum","Kinase, putative (AHRD V3.3 *-* B9SYC3_RICCO)","protein_coding"
"Solyc02g065300","No alias","Solanum lycopersicum","Leucyl-tRNA synthetase, putative (AHRD V3.3 *** B9SZE7_RICCO)","protein_coding"
"Solyc02g068390","No alias","Solanum lycopersicum","Mitochondrial inner membrane protease subunit 1 (AHRD V3.3 *** A0A1D1XGU0_9ARAE)","protein_coding"
"Solyc02g081010","No alias","Solanum lycopersicum","Transcription factor jumonji (jmjC) domain-containing protein (AHRD V3.3 *-* AT1G11950.3)","protein_coding"
"Solyc02g081410","No alias","Solanum lycopersicum","Beta-catenin-like protein 1 (AHRD V3.3 *** A0A1D1YKG0_9ARAE)","protein_coding"
"Solyc02g091190","No alias","Solanum lycopersicum","Protein-lysine N-methyltransferase PGSC0003DMG400030596 (AHRD V3.3 *** M1D0F7_SOLTU)","protein_coding"
"Solyc03g005600","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G04430.3)","protein_coding"
"Solyc03g120280","No alias","Solanum lycopersicum","Ran-binding protein 1 domain-containing (AHRD V3.3 *** B9GEK5_POPTR)","protein_coding"
"Solyc03g120720","No alias","Solanum lycopersicum","Protein disulfide isomerase like protein (AHRD V3.3 *** C4T847_SOYBN)","protein_coding"
"Solyc04g012040","No alias","Solanum lycopersicum","26S proteasome non-ATPase regulatory subunit (AHRD V3.3 *** A0A0K9PTB7_ZOSMR)","protein_coding"
"Solyc04g015070","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT5G47710.4)","protein_coding"
"Solyc04g025650","No alias","Solanum lycopersicum","FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** A0A072UIU6_MEDTR)","protein_coding"
"Solyc04g056280","No alias","Solanum lycopersicum","cyclin dependent kinase C","protein_coding"
"Solyc04g077790","No alias","Solanum lycopersicum","GPN-loop GTPase (AHRD V3.3 *** A0A0K9PFH6_ZOSMR)","protein_coding"
"Solyc04g080230","No alias","Solanum lycopersicum","Sugar transporter, putative (AHRD V3.3 *-* B9S6G4_RICCO)","protein_coding"
"Solyc04g080740","No alias","Solanum lycopersicum","BZIP transcription factor family protein (AHRD V3.3 *** B9H4F3_POPTR)","protein_coding"
"Solyc05g008380","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT1G71110.1)","protein_coding"
"Solyc05g012800","No alias","Solanum lycopersicum","LOW QUALITY:UDP-N-acetylmuramoylalanine--D-glutamate ligase (AHRD V3.3 *** A0A0B0MT50_GOSAR)","protein_coding"
"Solyc05g025500","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SWK2_RICCO)","protein_coding"
"Solyc05g051340","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H373_POPTR)","protein_coding"
"Solyc05g052920","No alias","Solanum lycopersicum","Folylpolyglutamate synthase (AHRD V3.3 *** K4C1X2_SOLLC)","protein_coding"
"Solyc05g055090","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)","protein_coding"
"Solyc05g056130","No alias","Solanum lycopersicum","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (AHRD V3.3 *** A0A0V0IGM4_SOLCH)","protein_coding"
"Solyc06g062530","No alias","Solanum lycopersicum","Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4C6Y4_SOLLC)","protein_coding"
"Solyc06g068320","No alias","Solanum lycopersicum","tRNA synthetase-related family protein (AHRD V3.3 *** B9GTA1_POPTR)","protein_coding"
"Solyc06g071310","No alias","Solanum lycopersicum","Pollen-specific protein SF3, putative (AHRD V3.3 *** Q53J16_SOLLC)","protein_coding"
"Solyc06g073360","No alias","Solanum lycopersicum","succinate dehydrogenase subunit (AHRD V3.3 *** AT5G62575.2)","protein_coding"
"Solyc06g075590","No alias","Solanum lycopersicum","CCR4-NOT transcription complex subunit 2 (AHRD V3.3 *** G7IUA4_MEDTR)","protein_coding"
"Solyc06g082100","No alias","Solanum lycopersicum","U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *** AT1G20960.2)","protein_coding"
"Solyc07g042720","No alias","Solanum lycopersicum","LOW QUALITY:Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061F5B2_THECC)","protein_coding"
"Solyc07g042910","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT5G58100.2)","protein_coding"
"Solyc07g047620","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SW54_RICCO)","protein_coding"
"Solyc08g042130","No alias","Solanum lycopersicum","Phox (PX) domain-containing protein (AHRD V3.3 *** AT4G32160.1)","protein_coding"
"Solyc08g044400","No alias","Solanum lycopersicum","SacI-like domain protein/WW domain protein (AHRD V3.3 *** G7JNP0_MEDTR)","protein_coding"
"Solyc08g075910","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3)","protein_coding"
"Solyc09g005910","No alias","Solanum lycopersicum","Phosphatidate phosphatase LPIN2-like protein (AHRD V3.3 *** A0A0B2PEL3_GLYSO)","protein_coding"
"Solyc09g007100","No alias","Solanum lycopersicum","bZIP transcription factor (DUF630 and DUF632) (AHRD V3.3 *** AT2G27090.2)","protein_coding"
"Solyc09g009510","No alias","Solanum lycopersicum","Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A061ETT5_THECC)","protein_coding"
"Solyc09g090700","No alias","Solanum lycopersicum","Aldehyde dehydrogenase (AHRD V3.3 *** A0A0V0ICD2_SOLCH)","protein_coding"
"Solyc09g098440","No alias","Solanum lycopersicum","ROP-interactive CRIB motif protein (AHRD V3.3 *** G7KTT6_MEDTR)","protein_coding"
"Solyc10g084770","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)","protein_coding"
"Solyc11g005000","No alias","Solanum lycopersicum","Keratinocytes-associated protein 2 (AHRD V3.3 *** B6SJ34_MAIZE)","protein_coding"
"Solyc11g005920","No alias","Solanum lycopersicum","NAC domain protein, (AHRD V3.3 *-* A0A061FNG1_THECC)","protein_coding"
"Solyc11g010270","No alias","Solanum lycopersicum","Homeobox associated leucine zipper protein (AHRD V3.3 *** A0A072TTL6_MEDTR)","protein_coding"
"Solyc11g010280","No alias","Solanum lycopersicum","NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (AHRD V3.3 --* NU5C_GUIAB)","protein_coding"
"Solyc11g010810","No alias","Solanum lycopersicum","UDP-glycosyltransferase (AHRD V3.3 *** A0A165XS50_DAUCA)","protein_coding"
"Solyc11g017230","No alias","Solanum lycopersicum","5'-3' exonuclease family protein (AHRD V3.3 *** AT1G34380.2)","protein_coding"
"Solyc11g045120","No alias","Solanum lycopersicum","Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151R7Y9_CAJCA)","protein_coding"
"Solyc11g066610","No alias","Solanum lycopersicum","AT1G08220-like protein (AHRD V3.3 *** A0A0G4ALR4_9ROSI)","protein_coding"
"Solyc12g008360","No alias","Solanum lycopersicum","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 (AHRD V3.3 *** W9RM44_9ROSA)","protein_coding"
"Solyc12g043000","No alias","Solanum lycopersicum","Coatomer subunit beta-like protein (AHRD V3.3 *** A0A072VC11_MEDTR)","protein_coding"
"Solyc12g049420","No alias","Solanum lycopersicum","25. vesicle transport protein (AHRD V3.3 *** A0A1D1XNZ8_9ARAE)","protein_coding"
"Solyc12g099840","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K338_CYNCS)","protein_coding"
"Solyc12g099860","No alias","Solanum lycopersicum","Mitochondrial GTPase 1 (AHRD V3.3 *** A0A1D1XTV6_9ARAE)","protein_coding"
"Sopen01g051600","No alias","Solanum pennellii","Oligosaccharyltransferase 48 kDa subunit beta","protein_coding"