"sequence_id","alias","species","description","type"
"101367","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"110201","No alias","Selaginella moellendorffii ","RNA polymerase II large subunit","protein_coding"
"112042","No alias","Selaginella moellendorffii ","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"115849","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"117217","No alias","Selaginella moellendorffii ","auxin response factor 6","protein_coding"
"13924","No alias","Selaginella moellendorffii ","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"141341","No alias","Selaginella moellendorffii ","auxin transport protein (BIG)","protein_coding"
"148107","No alias","Selaginella moellendorffii ","DNA-directed RNA polymerase family protein","protein_coding"
"154179","No alias","Selaginella moellendorffii ","ubiquitin-protein ligase 1","protein_coding"
"173562","No alias","Selaginella moellendorffii ","THO2","protein_coding"
"173603","No alias","Selaginella moellendorffii ","Pre-mRNA-processing-splicing factor","protein_coding"
"182327","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"183345","No alias","Selaginella moellendorffii ","Kinase interacting (KIP1-like) family protein","protein_coding"
"230767","No alias","Selaginella moellendorffii ","transducin family protein / WD-40 repeat family protein","protein_coding"
"269256","No alias","Selaginella moellendorffii ","poly(A) binding protein 8","protein_coding"
"270172","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"404055","No alias","Selaginella moellendorffii ","Tudor/PWWP/MBT domain-containing protein","protein_coding"
"405633","No alias","Selaginella moellendorffii ","RNI-like superfamily protein","protein_coding"
"406091","No alias","Selaginella moellendorffii ","TIFY domain/Divergent CCT motif family protein","protein_coding"
"422967","No alias","Selaginella moellendorffii ","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)","protein_coding"
"426541","No alias","Selaginella moellendorffii ","CW-type Zinc Finger","protein_coding"
"438275","No alias","Selaginella moellendorffii ","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"438401","No alias","Selaginella moellendorffii ","nuclear RNA polymerase A1","protein_coding"
"439148","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1162)","protein_coding"
"440505","No alias","Selaginella moellendorffii ","TIC-like","protein_coding"
"440815","No alias","Selaginella moellendorffii ","chromatin remodeling 5","protein_coding"
"443140","No alias","Selaginella moellendorffii ","modifier of snc1","protein_coding"
"444546","No alias","Selaginella moellendorffii ","mitogen-activated protein kinase kinase kinase 7","protein_coding"
"45495","No alias","Selaginella moellendorffii ","little nuclei4","protein_coding"
"75628","No alias","Selaginella moellendorffii ","phospholipase C 2","protein_coding"
"76535","No alias","Selaginella moellendorffii ","Apoptosis inhibitory protein 5 (API5)","protein_coding"
"77824","No alias","Selaginella moellendorffii ","dynamin-like 3","protein_coding"
"82033","No alias","Selaginella moellendorffii ","pleckstrin homology (PH) domain-containing protein","protein_coding"
"84835","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"85244","No alias","Selaginella moellendorffii ","CBS domain-containing protein with a domain of unknown function (DUF21)","protein_coding"
"85532","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"88336","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"89770","No alias","Selaginella moellendorffii ","Homeodomain-like superfamily protein","protein_coding"
"90823","No alias","Selaginella moellendorffii ","RNA polymerase II transcription mediators","protein_coding"
"92147","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"93893","No alias","Selaginella moellendorffii ","DWNN domain, a CCHC-type zinc finger","protein_coding"
"98463","No alias","Selaginella moellendorffii ","Phosphatidylinositol 3- and 4-kinase family protein with FAT domain","protein_coding"
"A4A49_30390","No alias","Nicotiana attenuata","pre-mrna-processing-splicing factor 8a","protein_coding"
"A4A49_60693","No alias","Nicotiana attenuata","pre-mrna-processing-splicing factor 8a","protein_coding"
"AC185226.4_FG001","No alias","Zea mays","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"AC197118.3_FG005","No alias","Zea mays","DNA/RNA-binding protein Kin17, conserved region","protein_coding"
"At1g01320","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HS99]","protein_coding"
"At1g01900","No alias","Arabidopsis thaliana","SBTI1.1 [Source:UniProtKB/TrEMBL;Acc:A0A178W900]","protein_coding"
"At1g02080","No alias","Arabidopsis thaliana","Transcription regulator [Source:UniProtKB/TrEMBL;Acc:F4HVV6]","protein_coding"
"At1g04080","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I448]","protein_coding"
"At1g08260","No alias","Arabidopsis thaliana","DNA polymerase epsilon catalytic subunit A [Source:UniProtKB/Swiss-Prot;Acc:F4HW04]","protein_coding"
"At1g08600","No alias","Arabidopsis thaliana","CHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]","protein_coding"
"At1g09680","No alias","Arabidopsis thaliana","Putative pentatricopeptide repeat-containing protein At1g09680 [Source:UniProtKB/Swiss-Prot;Acc:O04491]","protein_coding"
"At1g11660","No alias","Arabidopsis thaliana","Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]","protein_coding"
"At1g11950","No alias","Arabidopsis thaliana","Transcription factor jumonji (JmjC) domain-containing protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUU8]","protein_coding"
"At1g12210","No alias","Arabidopsis thaliana","Disease resistance protein RFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L3R3]","protein_coding"
"At1g13120","No alias","Arabidopsis thaliana","Protein GLE1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPZ7]","protein_coding"
"At1g20960","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]","protein_coding"
"At1g22060","No alias","Arabidopsis thaliana","LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 p /.../s in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink). [Source:TAIR;Acc:AT1G22060]","protein_coding"
"At1g23230","No alias","Arabidopsis thaliana","Mediator of RNA polymerase II transcription subunit 23 [Source:UniProtKB/Swiss-Prot;Acc:F4I4P3]","protein_coding"
"At1g29350","No alias","Arabidopsis thaliana","Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]","protein_coding"
"At1g31360","No alias","Arabidopsis thaliana","RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]","protein_coding"
"At1g31730","No alias","Arabidopsis thaliana","AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]","protein_coding"
"At1g47900","No alias","Arabidopsis thaliana","Filament-like plant protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C698]","protein_coding"
"At1g49040","No alias","Arabidopsis thaliana","SCD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WQS8]","protein_coding"
"At1g50280","No alias","Arabidopsis thaliana","BTB/POZ domain-containing protein At1g50280 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXR6]","protein_coding"
"At1g50500","No alias","Arabidopsis thaliana","Membrane trafficking VPS53 family protein [Source:TAIR;Acc:AT1G50500]","protein_coding"
"At1g58230","No alias","Arabidopsis thaliana","binding [Source:TAIR;Acc:AT1G58230]","protein_coding"
"At1g61370","No alias","Arabidopsis thaliana","G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Source:UniProtKB/Swiss-Prot;Acc:O64783]","protein_coding"
"At1g70320","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase UPL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T4]","protein_coding"
"At1g73805","No alias","Arabidopsis thaliana","Protein SAR DEFICIENT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9T2]","protein_coding"
"At1g74690","No alias","Arabidopsis thaliana","Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]","protein_coding"
"At1g75150","No alias","Arabidopsis thaliana","unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). [Source:TAIR;Acc:AT1G75150]","protein_coding"
"At1g77140","No alias","Arabidopsis thaliana","VPS45 [Source:UniProtKB/TrEMBL;Acc:A0A178WPE4]","protein_coding"
"At1g79610","No alias","Arabidopsis thaliana","Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]","protein_coding"
"At1g79990","No alias","Arabidopsis thaliana","Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:A0A178WGE9]","protein_coding"
"At1g80070","No alias","Arabidopsis thaliana","SUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]","protein_coding"
"At1g80680","No alias","Arabidopsis thaliana","Nuclear pore complex protein NUP96 [Source:UniProtKB/Swiss-Prot;Acc:Q8LLD0]","protein_coding"
"At1g80790","No alias","Arabidopsis thaliana","Factor of DNA methylation 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI1]","protein_coding"
"At2g14680","No alias","Arabidopsis thaliana","Myosin heavy chain-like protein [Source:UniProtKB/TrEMBL;Acc:F4IGF6]","protein_coding"
"At2g16920","No alias","Arabidopsis thaliana","Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]","protein_coding"
"At2g19950","No alias","Arabidopsis thaliana","GC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VUM2]","protein_coding"
"At2g20240","No alias","Arabidopsis thaliana","GPI-anchored adhesin-like protein, putative (DUF3741) [Source:UniProtKB/TrEMBL;Acc:Q9SK77]","protein_coding"
"At2g20850","No alias","Arabidopsis thaliana","Protein STRUBBELIG-RECEPTOR FAMILY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06BH3]","protein_coding"
"At2g24440","No alias","Arabidopsis thaliana","Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ24]","protein_coding"
"At2g25170","No alias","Arabidopsis thaliana","chromatin remodeling factor CHD3 (PICKLE) [Source:TAIR;Acc:AT2G25170]","protein_coding"
"At2g31320","No alias","Arabidopsis thaliana","Poly [ADP-ribose] polymerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP54]","protein_coding"
"At2g33730","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 21 [Source:UniProtKB/Swiss-Prot;Acc:P93008]","protein_coding"
"At2g35630","No alias","Arabidopsis thaliana","Protein MOR1 [Source:UniProtKB/Swiss-Prot;Acc:Q94FN2]","protein_coding"
"At2g36490","No alias","Arabidopsis thaliana","Protein ROS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ6]","protein_coding"
"At2g40130","No alias","Arabidopsis thaliana","Protein SMAX1-LIKE 8 [Source:UniProtKB/Swiss-Prot;Acc:F4IGZ2]","protein_coding"
"At2g44200","No alias","Arabidopsis thaliana","At2g44200/F6E13.34 [Source:UniProtKB/TrEMBL;Acc:O64855]","protein_coding"
"At2g45540","No alias","Arabidopsis thaliana","BEACH domain-containing protein C2 [Source:UniProtKB/Swiss-Prot;Acc:F4IG73]","protein_coding"
"At2g45900","No alias","Arabidopsis thaliana","TRM13 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV9]","protein_coding"
"At3g02260","No alias","Arabidopsis thaliana","Auxin transport protein BIG [Source:UniProtKB/Swiss-Prot;Acc:Q9SRU2]","protein_coding"
"At3g04340","No alias","Arabidopsis thaliana","Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4J3N2]","protein_coding"
"At3g06400","No alias","Arabidopsis thaliana","Chromatin-remodeling complex ATPase [Source:UniProtKB/TrEMBL;Acc:F4JAV9]","protein_coding"
"At3g09360","No alias","Arabidopsis thaliana","Cyclin/Brf1-like TBP-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WVQ3]","protein_coding"
"At3g10380","No alias","Arabidopsis thaliana","SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]","protein_coding"
"At3g11560","No alias","Arabidopsis thaliana","AT3G11560 protein [Source:UniProtKB/TrEMBL;Acc:Q8H0W4]","protein_coding"
"At3g13290","No alias","Arabidopsis thaliana","Varicose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]","protein_coding"
"At3g14330","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g14330 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUL5]","protein_coding"
"At3g18480","No alias","Arabidopsis thaliana","Protein CASP [Source:UniProtKB/Swiss-Prot;Acc:Q9LS42]","protein_coding"
"At3g18640","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIH5]","protein_coding"
"At3g20010","No alias","Arabidopsis thaliana","Helicase-like transcription factor CHR27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE4]","protein_coding"
"At3g21470","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g21470 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF9]","protein_coding"
"At3g22790","No alias","Arabidopsis thaliana","Protein NETWORKED 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI2]","protein_coding"
"At3g23070","No alias","Arabidopsis thaliana","CRM-domain containing factor CFM3A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4J2U9]","protein_coding"
"At3g24320","No alias","Arabidopsis thaliana","DNA mismatch repair protein MSH1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84LK0]","protein_coding"
"At3g27000","No alias","Arabidopsis thaliana","Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]","protein_coding"
"At3g44600","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP71 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4D0]","protein_coding"
"At3g46220","No alias","Arabidopsis thaliana","E3 UFM1-protein ligase-like protein [Source:UniProtKB/TrEMBL;Acc:F4J7Z6]","protein_coding"
"At3g46960","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH11 [Source:UniProtKB/Swiss-Prot;Acc:F4JAA5]","protein_coding"
"At3g47840","No alias","Arabidopsis thaliana","Putative pentatricopeptide repeat-containing protein At3g47840 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS9]","protein_coding"
"At3g48730","No alias","Arabidopsis thaliana","Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42522]","protein_coding"
"At3g50380","No alias","Arabidopsis thaliana","Vacuolar protein sorting-associated protein, putative (DUF1162) [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ65]","protein_coding"
"At3g54010","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]","protein_coding"
"At3g54670","No alias","Arabidopsis thaliana","Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q1P4]","protein_coding"
"At3g56860","No alias","Arabidopsis thaliana","UBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]","protein_coding"
"At3g62300","No alias","Arabidopsis thaliana","DOMAIN OF UNKNOWN FUNCTION 724 7 [Source:TAIR;Acc:AT3G62300]","protein_coding"
"At4g01290","No alias","Arabidopsis thaliana","Chorismate synthase [Source:UniProtKB/TrEMBL;Acc:Q56YR0]","protein_coding"
"At4g02030","No alias","Arabidopsis thaliana","Vps51/Vps67 family (Components of vesicular transport) protein [Source:UniProtKB/TrEMBL;Acc:F4JH69]","protein_coding"
"At4g02720","No alias","Arabidopsis thaliana","AT4g02720/T10P11_1 [Source:UniProtKB/TrEMBL;Acc:Q8S9I4]","protein_coding"
"At4g11130","No alias","Arabidopsis thaliana","RNA-dependent RNA polymerase 2 [Source:UniProtKB/Swiss-Prot;Acc:O82504]","protein_coding"
"At4g11890","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPT7]","protein_coding"
"At4g13650","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g13650 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVP7]","protein_coding"
"At4g14200","No alias","Arabidopsis thaliana","Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUM8]","protein_coding"
"At4g15820","No alias","Arabidopsis thaliana","BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source:  /.../Link). [Source:TAIR;Acc:AT4G15820]","protein_coding"
"At4g20770","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g20770 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVH0]","protein_coding"
"At4g29060","No alias","Arabidopsis thaliana","Elongation factor Ts, mitochondrial [Source:UniProtKB/TrEMBL;Acc:Q9SZD6]","protein_coding"
"At4g30890","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPS3]","protein_coding"
"At4g36690","No alias","Arabidopsis thaliana","U2 snRNP auxiliary factor large subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UYD2]","protein_coding"
"At4g38780","No alias","Arabidopsis thaliana","Pre-mRNA-processing-splicing factor [Source:TAIR;Acc:AT4G38780]","protein_coding"
"At4g39120","No alias","Arabidopsis thaliana","myo-inositol monophosphatase like 2 [Source:TAIR;Acc:AT4G39120]","protein_coding"
"At4g39620","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SV96]","protein_coding"
"At5g03280","No alias","Arabidopsis thaliana","Ethylene-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S814]","protein_coding"
"At5g16280","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT5G16280]","protein_coding"
"At5g16680","No alias","Arabidopsis thaliana","RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KE59]","protein_coding"
"At5g19310","No alias","Arabidopsis thaliana","Probable ATP-dependent DNA helicase CHR23 [Source:UniProtKB/Swiss-Prot;Acc:F4K128]","protein_coding"
"At5g24620","No alias","Arabidopsis thaliana","Pathogenesis-related thaumatin superfamily protein [Source:TAIR;Acc:AT5G24620]","protein_coding"
"At5g27010","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:TAIR;Acc:AT5G27010]","protein_coding"
"At5g27240","No alias","Arabidopsis thaliana","DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]","protein_coding"
"At5g35210","No alias","Arabidopsis thaliana","metalloendopeptidases;zinc ion binding;DNA binding [Source:TAIR;Acc:AT5G35210]","protein_coding"
"At5g41850","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FJ29]","protein_coding"
"At5g51660","No alias","Arabidopsis thaliana","Cleavage and polyadenylation specificity factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR0]","protein_coding"
"At5g51750","No alias","Arabidopsis thaliana","Subtilisin-like protease SBT1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI4]","protein_coding"
"At5g52520","No alias","Arabidopsis thaliana","Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]","protein_coding"
"At5g56240","No alias","Arabidopsis thaliana","BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]","protein_coding"
"At5g59600","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g59600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR2]","protein_coding"
"At5g61040","No alias","Arabidopsis thaliana","Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNR0]","protein_coding"
"At5g65770","No alias","Arabidopsis thaliana","little nuclei4 [Source:TAIR;Acc:AT5G65770]","protein_coding"
"At5g66310","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-7H [Source:UniProtKB/Swiss-Prot;Acc:F4JZ68]","protein_coding"
"At5g67450","No alias","Arabidopsis thaliana","ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]","protein_coding"
"Bradi1g04980","No alias","Brachypodium distachyon","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"Bradi1g10447","No alias","Brachypodium distachyon","ILITYHIA","protein_coding"
"Bradi1g12216","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi1g17590","No alias","Brachypodium distachyon","REF4-related 1","protein_coding"
"Bradi1g17650","No alias","Brachypodium distachyon","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Bradi1g17710","No alias","Brachypodium distachyon","cullin-associated and neddylation dissociated","protein_coding"
"Bradi1g18910","No alias","Brachypodium distachyon","chromatin remodeling 5","protein_coding"
"Bradi1g19370","No alias","Brachypodium distachyon","Tudor/PWWP/MBT domain-containing protein","protein_coding"
"Bradi1g19650","No alias","Brachypodium distachyon","Phosphatidylinositol 3- and 4-kinase family protein with FAT domain","protein_coding"
"Bradi1g21177","No alias","Brachypodium distachyon","RNA polymerase II transcription mediators","protein_coding"
"Bradi1g24950","No alias","Brachypodium distachyon","THO2","protein_coding"
"Bradi1g25002","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 4G","protein_coding"
"Bradi1g37790","No alias","Brachypodium distachyon","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Bradi1g41947","No alias","Brachypodium distachyon","embryo defective 2016","protein_coding"
"Bradi1g43097","No alias","Brachypodium distachyon","varicose-related","protein_coding"
"Bradi1g44550","No alias","Brachypodium distachyon","golgi alpha-mannosidase II","protein_coding"
"Bradi1g48264","No alias","Brachypodium distachyon","Pre-mRNA-processing-splicing factor","protein_coding"
"Bradi1g58030","No alias","Brachypodium distachyon","GYF domain-containing protein","protein_coding"
"Bradi1g61380","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g77770","No alias","Brachypodium distachyon","Adaptor protein complex AP-2, alpha subunit","protein_coding"
"Bradi2g01550","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 3A","protein_coding"
"Bradi2g05460","No alias","Brachypodium distachyon","glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative","protein_coding"
"Bradi2g08390","No alias","Brachypodium distachyon","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding"
"Bradi2g12810","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi2g25857","No alias","Brachypodium distachyon","phosphate deficiency response 2","protein_coding"
"Bradi2g28007","No alias","Brachypodium distachyon","target of rapamycin","protein_coding"
"Bradi2g45817","No alias","Brachypodium distachyon","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Bradi2g47450","No alias","Brachypodium distachyon","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein","protein_coding"
"Bradi2g59247","No alias","Brachypodium distachyon","GYF domain-containing protein","protein_coding"
"Bradi2g62540","No alias","Brachypodium distachyon","P-glycoprotein  20","protein_coding"
"Bradi3g00290","No alias","Brachypodium distachyon","translation initiation factor 3 (IF-3) family protein","protein_coding"
"Bradi3g00350","No alias","Brachypodium distachyon","HEAT repeat ;HECT-domain (ubiquitin-transferase)","protein_coding"
"Bradi3g03140","No alias","Brachypodium distachyon","DNA polymerase V family","protein_coding"
"Bradi3g07490","No alias","Brachypodium distachyon","Protein of unknown function (DUF3414)","protein_coding"
"Bradi3g07637","No alias","Brachypodium distachyon","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Bradi3g12030","No alias","Brachypodium distachyon","Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding"
"Bradi3g28648","No alias","Brachypodium distachyon","purine biosynthesis 4","protein_coding"
"Bradi3g43050","No alias","Brachypodium distachyon","nuclear RNA polymerase C1","protein_coding"
"Bradi3g46440","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g49467","No alias","Brachypodium distachyon","B-block binding subunit of TFIIIC","protein_coding"
"Bradi3g53160","No alias","Brachypodium distachyon","DegP protease 7","protein_coding"
"Bradi3g53420","No alias","Brachypodium distachyon","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Bradi4g06470","No alias","Brachypodium distachyon","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Bradi4g07717","No alias","Brachypodium distachyon","ATP-dependent helicase family protein","protein_coding"
"Bradi4g07760","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g07997","No alias","Brachypodium distachyon","ubiquitin-protein ligase 1","protein_coding"
"Bradi4g08567","No alias","Brachypodium distachyon","auxin transport protein (BIG)","protein_coding"
"Bradi4g08587","No alias","Brachypodium distachyon","Argonaute family protein","protein_coding"
"Bradi4g08887","No alias","Brachypodium distachyon","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Bradi4g17287","No alias","Brachypodium distachyon","no exine formation 1","protein_coding"
"Bradi4g33310","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g35150","No alias","Brachypodium distachyon","cell division cycle protein 48-related / CDC48-related","protein_coding"
"Bradi4g35977","No alias","Brachypodium distachyon","nucleic acid binding;zinc ion binding;DNA binding","protein_coding"
"Bradi4g45065","No alias","Brachypodium distachyon","nuclear RNA polymerase D1B","protein_coding"
"Bradi5g12820","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi5g14687","No alias","Brachypodium distachyon","MIF4G domain-containing protein / MA3 domain-containing protein","protein_coding"
"Bradi5g20070","No alias","Brachypodium distachyon","NDR1/HIN1-like 8","protein_coding"
"Bradi5g20920","No alias","Brachypodium distachyon","alpha-mannosidase 1","protein_coding"
"Bradi5g22117","No alias","Brachypodium distachyon","nucleolin like 2","protein_coding"
"Brara.A00164.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00420.1","No alias","Brassica rapa","TERT","protein_coding"
"Brara.A00627.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00933.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding"
"Brara.A01074.1","No alias","Brassica rapa","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Brara.A01135.1","No alias","Brassica rapa","miRNA/siRNA methyltransferase *(HEN1)","protein_coding"
"Brara.A01582.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01623.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01753.1","No alias","Brassica rapa","oligopeptide transporter *(OPT)","protein_coding"
"Brara.A02123.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02227.1","No alias","Brassica rapa","SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex","protein_coding"
"Brara.A02282.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02775.1","No alias","Brassica rapa","oxidoreductase *(LBO) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.A03272.1","No alias","Brassica rapa","ubiquitin-proteasome shuttle factor *(DDI1)","protein_coding"
"Brara.A03279.1","No alias","Brassica rapa","sporopollenin precursor exporter *(ABCG26) & subfamily ABCG transporter","protein_coding"
"Brara.A03793.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00296.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00304.1","No alias","Brassica rapa","transcriptional co-activator *(KIWI/KELP) involved in intine formation","protein_coding"
"Brara.B00351.1","No alias","Brassica rapa","LRR-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B00398.1","No alias","Brassica rapa","ligand-gated cation channel *(GLR)","protein_coding"
"Brara.B00689.1","No alias","Brassica rapa","nucleocytoplasmic export karyopherin *(XPO1) & export karyopherin *(XPO1) of RNA-induced silencing complex (RISC) export","protein_coding"
"Brara.B00895.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01114.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01119.1","No alias","Brassica rapa","component *(NRPB7) of RNA polymerase II complex","protein_coding"
"Brara.B01201.1","No alias","Brassica rapa","regulatory protein *(CBP60) of systemic acquired resistance","protein_coding"
"Brara.B01264.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01692.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01745.1","No alias","Brassica rapa","alpha-L-fucosidase *(FXG)","protein_coding"
"Brara.B01849.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01993.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02136.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02206.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02279.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02371.1","No alias","Brassica rapa","keto-3-deoxymanno-octulosonic acid 8-phosphate synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.B02414.1","No alias","Brassica rapa","methylthioalkylmalate dehydrogenase & 3-isopropylmalate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.B02925.1","No alias","Brassica rapa","assembly factor ISD11 of mitochondrial ISC system assembly phase","protein_coding"
"Brara.B03388.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03501.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding"
"Brara.B03544.1","No alias","Brassica rapa","regulatory GTPase (MIRO) of mitochondrion fission","protein_coding"
"Brara.B03594.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & phosphoglucan water dikinase *(PWD)","protein_coding"
"Brara.B03852.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00075.1","No alias","Brassica rapa","component *(OST4) of oligosaccharyl transferase (OST) complex","protein_coding"
"Brara.C00138.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00209.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00447.1","No alias","Brassica rapa","histone *(H3)","protein_coding"
"Brara.C00449.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01024.1","No alias","Brassica rapa","glucuronoxylan glucuronosyltransferase *(IRX7)","protein_coding"
"Brara.C01092.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01222.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01295.1","No alias","Brassica rapa","beta-1,2-xylosyltransferase","protein_coding"
"Brara.C01379.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01786.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01878.1","No alias","Brassica rapa","C2H2-type subclass ZAT transcription factor","protein_coding"
"Brara.C02175.1","No alias","Brassica rapa","ribose-phosphate diphosphokinase","protein_coding"
"Brara.C02320.1","No alias","Brassica rapa","component *(mL46) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.C02413.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02415.1","No alias","Brassica rapa","EARP-specific component *(Syndetin-like) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Brara.C02441.1","No alias","Brassica rapa","FRS/FRF-type transcription factor","protein_coding"
"Brara.C02673.1","No alias","Brassica rapa","catalytic component of PP1 phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.C02889.1","No alias","Brassica rapa","zinc metalloprotease *(STE24) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.C02910.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03224.1","No alias","Brassica rapa","component *(p24-beta) of GPI-anchor protein cargo receptor complex","protein_coding"
"Brara.C03286.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03569.1","No alias","Brassica rapa","choline transporter *(CHER/CTL1)","protein_coding"
"Brara.C03768.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.C03769.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03785.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03843.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding"
"Brara.C04202.1","No alias","Brassica rapa","bZIP class-S/SE transcription factor","protein_coding"
"Brara.C04226.1","No alias","Brassica rapa","class-II histone deacetylase","protein_coding"
"Brara.C04292.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04500.1","No alias","Brassica rapa","component *(NDUFB1/MNLL) of NADH dehydrogenase beta subcomplex","protein_coding"
"Brara.C04565.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04576.1","No alias","Brassica rapa","coniferin beta-glucosidase & EC_3.2 glycosylase","protein_coding"
"Brara.D00086.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00465.1","No alias","Brassica rapa","UMP synthase *(UMPS)","protein_coding"
"Brara.D00834.1","No alias","Brassica rapa","abscisic acid receptor recruitment factor *(CAR)","protein_coding"
"Brara.D00922.1","No alias","Brassica rapa","cysteine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Brara.D00957.1","No alias","Brassica rapa","CDK9 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D01354.1","No alias","Brassica rapa","pythosulfokine precursor polypeptide *(PSK)","protein_coding"
"Brara.D01524.1","No alias","Brassica rapa","subunit A of ribonuclease H2 complex","protein_coding"
"Brara.D01669.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01727.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding"
"Brara.D01802.1","No alias","Brassica rapa","malonyl-CoA","protein_coding"
"Brara.D01879.1","No alias","Brassica rapa","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Brara.D02186.1","No alias","Brassica rapa","cytokinin phosphoribohydrolase *(LOG)","protein_coding"
"Brara.D02483.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding"
"Brara.D02486.1","No alias","Brassica rapa","chromatin remodeling factor *(SHPRH)","protein_coding"
"Brara.D02826.1","No alias","Brassica rapa","transcriptional repressor *(IAA/AUX)","protein_coding"
"Brara.E00055.1","No alias","Brassica rapa","S9-class plastidial glutamyl peptidase *(CGEP)","protein_coding"
"Brara.E00318.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00549.1","No alias","Brassica rapa","DNA endonuclease *(CAN)","protein_coding"
"Brara.E00655.1","No alias","Brassica rapa","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Brara.E00772.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00881.1","No alias","Brassica rapa","LRR-XIIIa protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E01314.1","No alias","Brassica rapa","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Brara.E01758.1","No alias","Brassica rapa","adapter component *(SEU/SLK) of transcriptional co-repressor complex","protein_coding"
"Brara.E02108.1","No alias","Brassica rapa","scaffold protein NFU4/5 of mitochondrial ISC system transfer phase","protein_coding"
"Brara.E02202.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.E02382.1","No alias","Brassica rapa","component *(NRPD2) of RNA polymerase IV complex & component *(NRPE2) of RNA polymerase V complex","protein_coding"
"Brara.E02716.1","No alias","Brassica rapa","cation","protein_coding"
"Brara.E02763.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02956.1","No alias","Brassica rapa","heavy chain of clathrin triskelion","protein_coding"
"Brara.E03270.1","No alias","Brassica rapa","D-galactokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E03456.1","No alias","Brassica rapa","cutin synthase *(CD)","protein_coding"
"Brara.E03516.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03651.1","No alias","Brassica rapa","phosphoethanolamine transferase-I *(PIG-N)","protein_coding"
"Brara.E03664.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00336.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00503.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00525.1","No alias","Brassica rapa","component *(MAG2) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Brara.F00557.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-1 transcription factor","protein_coding"
"Brara.F00703.1","No alias","Brassica rapa","substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Brara.F00870.1","No alias","Brassica rapa","EC_2.2 transferase transferring aldehyde or ketonic group","protein_coding"
"Brara.F01031.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01065.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01576.1","No alias","Brassica rapa","methyltransferase *(CGR)","protein_coding"
"Brara.F01604.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01801.1","No alias","Brassica rapa","component *(LUX) of circadian clock Evening complex (EC)","protein_coding"
"Brara.F01825.1","No alias","Brassica rapa","component *(uS8) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.F01935.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01944.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02038.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02051.1","No alias","Brassica rapa","mRNA endoribonuclease *(TSN)","protein_coding"
"Brara.F02714.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03328.1","No alias","Brassica rapa","component *(TMO5) of TMO5-LHW cytokinin control complex & bHLH-type transcription factor","protein_coding"
"Brara.F03405.1","No alias","Brassica rapa","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F03456.1","No alias","Brassica rapa","iron transporter *(VIT) & metal cation transporter *(VIT)","protein_coding"
"Brara.F03610.1","No alias","Brassica rapa","medium subunit mu of AP-2 cargo adaptor complex","protein_coding"
"Brara.F03693.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03824.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.F03832.1","No alias","Brassica rapa","component *(THOC5) of mRNP trafficking THO subcomplex","protein_coding"
"Brara.F03838.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03846.1","No alias","Brassica rapa","component *(BRCC45) of BRCC regulatory deubiquination complex","protein_coding"
"Brara.F03855.1","No alias","Brassica rapa","mid-chain alkane hydroxylase *(MAH1) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.G00009.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00166.1","No alias","Brassica rapa","histone chaperone *(NAP)","protein_coding"
"Brara.G00236.1","No alias","Brassica rapa","small GTPase *(ROP)","protein_coding"
"Brara.G00732.1","No alias","Brassica rapa","regulatory protein *(AMB1303) of thylakoid organisation","protein_coding"
"Brara.G00814.1","No alias","Brassica rapa","regulatory protein *(VQ) of WRKY activity","protein_coding"
"Brara.G01011.1","No alias","Brassica rapa","sulfate transporter *(SULTR)","protein_coding"
"Brara.G01085.1","No alias","Brassica rapa","component *(IDM2/IDM3) of ROS1-recruitment complex","protein_coding"
"Brara.G01279.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex *(NUP205)","protein_coding"
"Brara.G01621.1","No alias","Brassica rapa","mitochondrial uncoupling protein *(PUMP) & solute transporter *(MTCC)","protein_coding"
"Brara.G01645.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding"
"Brara.G01649.1","No alias","Brassica rapa","pectate lyase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.G01698.1","No alias","Brassica rapa","regulatory protein *(SCAB) of actin organisation","protein_coding"
"Brara.G01829.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & callose synthase","protein_coding"
"Brara.G02046.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex","protein_coding"
"Brara.G02729.1","No alias","Brassica rapa","LRR-I protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G02771.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03029.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03549.1","No alias","Brassica rapa","uridine 5-carboxymethylaminomethyl modification enzyme *(TrmE)","protein_coding"
"Brara.G03623.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03651.1","No alias","Brassica rapa","nucleoporin of nuclear pore complex *(NUA)","protein_coding"
"Brara.G03752.1","No alias","Brassica rapa","proton-translocating pyrophosphatase *(VHP2)","protein_coding"
"Brara.H00193.1","No alias","Brassica rapa","LysM protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H01126.1","No alias","Brassica rapa","RNA helicase *(Brr2)","protein_coding"
"Brara.H01305.1","No alias","Brassica rapa","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.H01386.1","No alias","Brassica rapa","deubiquitinase *(UBP24)","protein_coding"
"Brara.H01487.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02023.1","No alias","Brassica rapa","sphingosine-1-phosphate lyase *(DPL1) & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.H02266.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02485.1","No alias","Brassica rapa","deubiquitinase *(UBP15-21)","protein_coding"
"Brara.H02528.1","No alias","Brassica rapa","proton-translocating pyrophosphatase *(VHP1) & proton-translocating pyrophosphatase *(VHP1)","protein_coding"
"Brara.H02777.1","No alias","Brassica rapa","component *(EXO84) of Exocyst complex","protein_coding"
"Brara.H02849.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.I00019.1","No alias","Brassica rapa","component *(Tim21) of inner mitochondrion membrane TIM translocation system","protein_coding"
"Brara.I00208.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00227.1","No alias","Brassica rapa","component *(PRPF6) of U5 snRNP complex","protein_coding"
"Brara.I00301.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-15 transcription factor","protein_coding"
"Brara.I00321.1","No alias","Brassica rapa","component *(NRP-ABCDE6) of RNA polymerase complexes","protein_coding"
"Brara.I00605.1","No alias","Brassica rapa","hydroxyproline beta-1,4-arabinosyltransferase *(HPAT) & hydroxyproline-O-arabinosyltransferase *(HPAT)","protein_coding"
"Brara.I00909.1","No alias","Brassica rapa","transcription factor *(A/B-GATA)","protein_coding"
"Brara.I00933.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01130.1","No alias","Brassica rapa","histone methyltransferase *(ASHR2)","protein_coding"
"Brara.I01160.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01307.1","No alias","Brassica rapa","component *(mS22) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.I01610.1","No alias","Brassica rapa","nucleoporin of nuclear pore complex *(NUP98)","protein_coding"
"Brara.I01644.1","No alias","Brassica rapa","TCP-type transcription factor","protein_coding"
"Brara.I01653.1","No alias","Brassica rapa","component *(NSE5) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Brara.I01714.1","No alias","Brassica rapa","acyl carrier protein *(ptACP))","protein_coding"
"Brara.I01716.1","No alias","Brassica rapa","phytyl ester synthase *(PES)","protein_coding"
"Brara.I02435.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02564.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02617.1","No alias","Brassica rapa","transcriptional regulator *(HsfA1) & HSF-type transcription factor","protein_coding"
"Brara.I02898.1","No alias","Brassica rapa","CEP precursor polypeptide","protein_coding"
"Brara.I03033.1","No alias","Brassica rapa","ketoacyl-ACP reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.I03117.1","No alias","Brassica rapa","component *(EAF7) of NuA4 histone acetyltransferase complex","protein_coding"
"Brara.I03757.1","No alias","Brassica rapa","pectate lyase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.I03785.1","No alias","Brassica rapa","enoyl-CoA reductase *(ECR) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Brara.I03816.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04099.1","No alias","Brassica rapa","component *(mL43) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.I04316.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04432.1","No alias","Brassica rapa","myosin adaptor protein *(MadB)","protein_coding"
"Brara.I04596.1","No alias","Brassica rapa","hydroxyacyl-ACP dehydratase *(ptHD))","protein_coding"
"Brara.I04663.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04679.1","No alias","Brassica rapa","EPF/EPFL precursor polypeptide","protein_coding"
"Brara.I04732.1","No alias","Brassica rapa","component *(CAF1c/MSI) of CAF1 histone chaperone complex & flowering time factor *(FVE)","protein_coding"
"Brara.I04858.1","No alias","Brassica rapa","E2 ubiquitin-conjugating enzyme","protein_coding"
"Brara.I05206.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05294.1","No alias","Brassica rapa","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"Brara.I05615.1","No alias","Brassica rapa","scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Brara.J00033.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00203.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00338.1","No alias","Brassica rapa","small subunit *(AXR1/AXL) of E1 RUB ubiquitin-activating enzyme complex","protein_coding"
"Brara.J00559.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.J00581.1","No alias","Brassica rapa","LRR-VIII-1 protein kinase & hydrogen peroxide receptor kinase *(HPCA) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.J00767.1","No alias","Brassica rapa","Cyt-P450 hydroxylase scaffold protein *(MSBP)","protein_coding"
"Brara.J00804.1","No alias","Brassica rapa","pyruvate kinase & plastidial pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.J00824.1","No alias","Brassica rapa","receptor component *(PYL/RCAR) of cytoplasm-localized abscisic acid receptor complex","protein_coding"
"Brara.J00857.1","No alias","Brassica rapa","Rab GTPase-activating protein","protein_coding"
"Brara.J01015.1","No alias","Brassica rapa","chromatin architectural modulator *(DEK)","protein_coding"
"Brara.J01138.1","No alias","Brassica rapa","strigolactone signal modulator *(SMXL)","protein_coding"
"Brara.J01213.1","No alias","Brassica rapa","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.J01284.1","No alias","Brassica rapa","RLCK-XII receptor-like protein kinase & brassinosteroid signalling protein kinase *(BSK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.J01409.1","No alias","Brassica rapa","substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.J01506.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01730.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01735.1","No alias","Brassica rapa","apyrase *(APY) & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.J01865.1","No alias","Brassica rapa","regulatory protein *(CTI) of polymeric acetyl-CoA carboxylase","protein_coding"
"Brara.J01869.1","No alias","Brassica rapa","component *(Tic40) of inner envelope TIC translocation system","protein_coding"
"Brara.J02044.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.J02053.1","No alias","Brassica rapa","subgroup ERF-VIII transcription factor","protein_coding"
"Brara.J02105.1","No alias","Brassica rapa","component *(SCD2)of post-Golgi trafficking SCD complex","protein_coding"
"Brara.K00172.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00450.1","No alias","Brassica rapa","EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & neoxanthin cleavage protein","protein_coding"
"Brara.K00551.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00997.1","No alias","Brassica rapa","MLK-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.K01138.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & caffeoyl-CoA 3-O-methyltransferase *(CCoA-OMT)","protein_coding"
"Brara.K01347.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01435.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01597.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g016050","No alias","Chlamydomonas reinhardtii","Pre-mRNA-processing-splicing factor","protein_coding"
"Cre01.g030550","No alias","Chlamydomonas reinhardtii","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding"
"Cre01.g031050","No alias","Chlamydomonas reinhardtii","global transcription factor group A2","protein_coding"
"Cre02.g075150","No alias","Chlamydomonas reinhardtii","DNA-directed RNA polymerase family protein","protein_coding"
"Cre02.g097250","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre02.g117850","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 9","protein_coding"
"Cre03.g146487","No alias","Chlamydomonas reinhardtii","exportin 1A","protein_coding"
"Cre03.g168650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g192400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g197400","No alias","Chlamydomonas reinhardtii","HCP-like superfamily protein","protein_coding"
"Cre04.g222300","No alias","Chlamydomonas reinhardtii","SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein","protein_coding"
"Cre04.g226450","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre05.g234658","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g244750","No alias","Chlamydomonas reinhardtii","AAR2 protein family","protein_coding"
"Cre06.g259800","No alias","Chlamydomonas reinhardtii","MIF4G domain-containing protein / MA3 domain-containing protein","protein_coding"
"Cre06.g269350","No alias","Chlamydomonas reinhardtii","GC-rich sequence DNA-binding factor-like protein","protein_coding"
"Cre06.g278203","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g279183","No alias","Chlamydomonas reinhardtii","Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein","protein_coding"
"Cre06.g297300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g297750","No alias","Chlamydomonas reinhardtii","splicing factor-related","protein_coding"
"Cre06.g300750","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre06.g307450","No alias","Chlamydomonas reinhardtii","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein","protein_coding"
"Cre07.g325713","No alias","Chlamydomonas reinhardtii","GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain","protein_coding"
"Cre07.g341925","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g341950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g362200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g367200","No alias","Chlamydomonas reinhardtii","Vps52 / Sac2 family","protein_coding"
"Cre08.g372800","No alias","Chlamydomonas reinhardtii","Cleavage and polyadenylation specificity factor (CPSF) A subunit protein","protein_coding"
"Cre08.g378450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g378550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g386731","No alias","Chlamydomonas reinhardtii","splicing factor-related","protein_coding"
"Cre09.g403182","No alias","Chlamydomonas reinhardtii","global transcription factor group B1","protein_coding"
"Cre09.g406983","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g407016","No alias","Chlamydomonas reinhardtii","Cobalamin biosynthesis CobW-like protein","protein_coding"
"Cre09.g409200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409801","No alias","Chlamydomonas reinhardtii","HD domain-containing metal-dependent phosphohydrolase family protein","protein_coding"
"Cre10.g437850","No alias","Chlamydomonas reinhardtii","CAP-binding protein 20","protein_coding"
"Cre10.g441000","No alias","Chlamydomonas reinhardtii","Transcription elongation factor (TFIIS) family protein","protein_coding"
"Cre10.g462150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g481900","No alias","Chlamydomonas reinhardtii","ENTH/VHS family protein","protein_coding"
"Cre12.g493000","No alias","Chlamydomonas reinhardtii","K+ efflux antiporter 5","protein_coding"
"Cre12.g506050","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre12.g508250","No alias","Chlamydomonas reinhardtii","Ubiquitin carboxyl-terminal hydrolase-related protein","protein_coding"
"Cre12.g510300","No alias","Chlamydomonas reinhardtii","ubiquitin-conjugating enzyme 25","protein_coding"
"Cre12.g513500","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre12.g514450","No alias","Chlamydomonas reinhardtii","proline-rich spliceosome-associated (PSP) family protein","protein_coding"
"Cre12.g524100","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre12.g524400","No alias","Chlamydomonas reinhardtii","villin 3","protein_coding"
"Cre12.g559950","No alias","Chlamydomonas reinhardtii","MITOCHONDRIAL  FERREDOXIN 2","protein_coding"
"Cre13.g590800","No alias","Chlamydomonas reinhardtii","histone H2A 10","protein_coding"
"Cre15.g636450","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre16.g661900","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre16.g662800","No alias","Chlamydomonas reinhardtii","WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related","protein_coding"
"Cre16.g666000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g672150","No alias","Chlamydomonas reinhardtii","RNA recognition motif (RRM)-containing protein","protein_coding"
"Cre16.g692400","No alias","Chlamydomonas reinhardtii","MRG family protein","protein_coding"
"Cre17.g707500","No alias","Chlamydomonas reinhardtii","translocon outer complex protein 120","protein_coding"
"Cre17.g711650","No alias","Chlamydomonas reinhardtii","HSP20-like chaperones superfamily protein","protein_coding"
"Cre17.g721600","No alias","Chlamydomonas reinhardtii","Ubiquitin C-terminal hydrolases superfamily protein","protein_coding"
"Cre17.g734400","No alias","Chlamydomonas reinhardtii","cullin 1","protein_coding"
"Cre17.g737250","No alias","Chlamydomonas reinhardtii","Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding"
"Cre17.g744147","No alias","Chlamydomonas reinhardtii","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Cre36.g759597","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2020.35","No alias","Porphyridium purpureum","(at1g21700 : 154.0) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes.  Referred to as CHB3 in Zhou et al (2003).; SWITCH/sucrose nonfermenting 3C (SWI3C); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, chromatin remodeling complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3); Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0; Bacteria - 43; Metazoa - 1892; Fungi - 779; Plants - 380; Viruses - 2; Other Eukaryotes - 1607 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2062.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2070.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2086.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.25","No alias","Porphyridium purpureum","(at4g23430 : 151.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39617|por_chlre : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Chlamydomonas reinhardtii & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.11","No alias","Porphyridium purpureum","(at3g26410 : 83.2) methyltransferases;nucleic acid binding; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), tRNA guanosine-2'-O-methyltransferase, TRM11 (InterPro:IPR016691), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 597 Blast hits to 588 proteins in 280 species: Archae - 150; Bacteria - 5; Metazoa - 158; Fungi - 132; Plants - 50; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2173.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2179.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2194.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2284.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2359.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2404.4","No alias","Porphyridium purpureum","(at4g01995 : 116.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2468.5","No alias","Porphyridium purpureum","(at4g11380 : 387.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.35","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2500.19","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2502.8","No alias","Porphyridium purpureum","(at2g39340 : 101.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2695.3","No alias","Porphyridium purpureum","(at1g48360 : 207.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3397.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3404.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3414.2","No alias","Porphyridium purpureum","(at3g03300 : 120.0) Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants.  Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.; dicer-like 2 (DCL2); FUNCTIONS IN: in 7 functions; INVOLVED IN: defense response to virus, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 4 (TAIR:AT5G20320.1). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3428.1","No alias","Porphyridium purpureum","(at5g61970 : 213.0) signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3456.7","No alias","Porphyridium purpureum","(at2g34560 : 94.7) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q96372|cdc48_capan : 85.9) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_3571.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3587.13","No alias","Porphyridium purpureum","(at1g80070 : 3076.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 6152.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_431.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4400.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4432.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4465.2","No alias","Porphyridium purpureum","(at5g10840 : 258.0) Endomembrane protein 70 protein family; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G25100.1); Has 1652 Blast hits to 1622 proteins in 358 species: Archae - 0; Bacteria - 81; Metazoa - 616; Fungi - 232; Plants - 453; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4492.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4522.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_468.4","No alias","Porphyridium purpureum","(at5g40820 : 342.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 288.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_473.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_743.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.91","No alias","Cyanophora paradoxa","(at4g17140 : 114.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.136","No alias","Cyanophora paradoxa","(at1g80070 : 229.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.137","No alias","Cyanophora paradoxa","(at1g80070 : 3340.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 6680.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.152","No alias","Cyanophora paradoxa","(at1g62020 : 592.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 94.7) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1184.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000145.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000158.13","No alias","Cyanophora paradoxa","(at4g18130 : 197.0) member of Histidine Kinase; phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). & (p36505|phy1_phypa : 194.0) Phytochrome 1 - Physcomitrella patens (Moss) & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000158.16","No alias","Cyanophora paradoxa","(at4g21710 : 946.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (q8ma12|rpob_chagl : 144.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chaetosphaeridium globosum & (reliability: 1892.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.26","No alias","Cyanophora paradoxa","(at3g12810 : 251.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 143.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.63","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000215.121","No alias","Cyanophora paradoxa","(at4g38130 : 506.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7.  Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 487.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000217.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000217.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.15","No alias","Cyanophora paradoxa","(at4g35800 : 1627.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (q9tl05|rpoc1_nepol : 127.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Nephroselmis olivacea & (reliability: 3254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.27","No alias","Cyanophora paradoxa","(at5g19610 : 149.0) GNOM-like 2 (GNL2); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: pollen germination; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000310.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.77","No alias","Cyanophora paradoxa","(at5g35750 : 83.6) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000411.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000411.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000431.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000431.18","No alias","Cyanophora paradoxa","(at1g06490 : 158.0) encodes a gene similar to callose synthase; glucan synthase-like 7 (GSL07); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1279 Blast hits to 924 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 9; Fungi - 711; Plants - 489; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000431.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000431.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000624.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000663.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000711.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000767.19","No alias","Cyanophora paradoxa","(at1g02080 : 377.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000802.67","No alias","Cyanophora paradoxa","(at3g06010 : 465.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 361.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.20","No alias","Cyanophora paradoxa","(at1g50240 : 377.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 130.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000851.23","No alias","Cyanophora paradoxa","(at4g05420 : 136.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000852.43","No alias","Cyanophora paradoxa","(at1g08840 : 113.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.27","No alias","Cyanophora paradoxa","(at1g20960 : 291.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.28","No alias","Cyanophora paradoxa","(at1g20960 : 1091.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2182.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000870.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.3","No alias","Cyanophora paradoxa","(at3g14010 : 125.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001024.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.5","No alias","Cyanophora paradoxa","(at3g55200 : 962.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1924.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001030.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001098.15","No alias","Cyanophora paradoxa","(at2g38770 : 650.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 1300.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.3","No alias","Cyanophora paradoxa","(at3g63460 : 236.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.28","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00001215.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001224.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001366.11","No alias","Cyanophora paradoxa","(at3g11910 : 226.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001373.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001408.7","No alias","Cyanophora paradoxa","(at3g06670 : 149.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49390.1). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001428.15","No alias","Cyanophora paradoxa","(at1g24706 : 246.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors.  Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunitTHOC2, C-region (InterPro:IPR021418), THO complex, subunitTHOC2, N-region (InterPro:IPR021726). & (reliability: 492.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001428.4","No alias","Cyanophora paradoxa","(at1g59453 : 80.9) B-block binding subunit of TFIIIC; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G17450.2); Has 138 Blast hits to 121 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 34; Fungi - 3; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001486.8","No alias","Cyanophora paradoxa","(at1g65440 : 311.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001537.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001542.16","No alias","Cyanophora paradoxa","(at3g15380 : 208.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020515.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.65","No alias","Cyanophora paradoxa","(q5z987|atr_orysa : 139.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (at5g40820 : 127.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.133","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.150","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.171","No alias","Cyanophora paradoxa","(p53535|phsl2_soltu : 271.0) Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-2) - Solanum tuberosum (Potato) & (at3g46970 : 259.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.284","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020564.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020572.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020616.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.20","No alias","Cyanophora paradoxa","(at4g34450 : 813.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 1626.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020685.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020903.20","No alias","Cyanophora paradoxa","(at1g32750 : 166.0) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; HAF01; FUNCTIONS IN: histone acetyltransferase activity, DNA binding; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TAFII-230 TBP-binding (InterPro:IPR009067), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the TAFII250 family 2 (TAIR:AT3G19040.1); Has 22854 Blast hits to 14376 proteins in 1001 species: Archae - 24; Bacteria - 596; Metazoa - 11292; Fungi - 2677; Plants - 2799; Viruses - 159; Other Eukaryotes - 5307 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.33","No alias","Cyanophora paradoxa","(at1g79990 : 1008.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (p49178|gbb_maize : 87.8) Guanine nucleotide-binding protein subunit beta - Zea mays (Maize) & (reliability: 2016.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.69","No alias","Cyanophora paradoxa","(at1g06220 : 825.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 388.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1650.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020918.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020960.24","No alias","Cyanophora paradoxa","(at2g13370 : 202.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 173.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.141","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020965.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021013.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.6","No alias","Cyanophora paradoxa","(at3g57330 : 623.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (q8run1|aca3_orysa : 594.0) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 1246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.41","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021357.33","No alias","Cyanophora paradoxa","(at5g26240 : 155.0) member of Anion channel protein family; chloride channel D (CLC-D); CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel C (TAIR:AT5G49890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021434.18","No alias","Cyanophora paradoxa","(at1g28010 : 148.0) P-glycoprotein 14 (PGP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 13 (TAIR:AT1G27940.1); Has 862231 Blast hits to 397322 proteins in 4187 species: Archae - 14893; Bacteria - 671155; Metazoa - 18443; Fungi - 12341; Plants - 9398; Viruses - 47; Other Eukaryotes - 135954 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 139.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021489.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.68","No alias","Cyanophora paradoxa","(at2g17930 : 373.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.29","No alias","Cyanophora paradoxa","(at3g26560 : 868.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1736.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021590.1","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021612.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G092400","No alias","Glycine max","tRNA arginine adenosine deaminase","protein_coding"
"Glyma.01G118200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G162200","No alias","Glycine max","RNA polymerase II large subunit","protein_coding"
"Glyma.01G224300","No alias","Glycine max","crooked neck protein, putative / cell cycle protein, putative","protein_coding"
"Glyma.02G041400","No alias","Glycine max","kinesin like protein for actin based chloroplast movement 1","protein_coding"
"Glyma.02G234300","No alias","Glycine max","RING/U-box superfamily protein with ARM repeat domain","protein_coding"
"Glyma.02G267300","No alias","Glycine max","histone mono-ubiquitination 2","protein_coding"
"Glyma.02G276800","No alias","Glycine max","Ubiquitin-associated/translation elongation factor EF1B protein","protein_coding"
"Glyma.02G312200","No alias","Glycine max","SEC7-like guanine nucleotide exchange family protein","protein_coding"
"Glyma.03G004400","No alias","Glycine max","proteasome family protein","protein_coding"
"Glyma.03G076900","No alias","Glycine max","defective in exine formation protein (DEX1)","protein_coding"
"Glyma.03G099800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G133700","No alias","Glycine max","INO80 ortholog","protein_coding"
"Glyma.03G147000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G151400","No alias","Glycine max","Tudor/PWWP/MBT domain-containing protein","protein_coding"
"Glyma.03G170000","No alias","Glycine max","CLIP-associated protein","protein_coding"
"Glyma.04G032700","No alias","Glycine max","GYF domain-containing protein","protein_coding"
"Glyma.04G062400","No alias","Glycine max","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Glyma.04G089400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G094300","No alias","Glycine max","MSCS-like 3","protein_coding"
"Glyma.04G096100","No alias","Glycine max","binding","protein_coding"
"Glyma.04G096900","No alias","Glycine max","ubiquitin-protein ligase 1","protein_coding"
"Glyma.04G160800","No alias","Glycine max","histone-lysine N-methyltransferases","protein_coding"
"Glyma.04G163600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G232700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G245400","No alias","Glycine max","histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)","protein_coding"
"Glyma.05G013100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G013400","No alias","Glycine max","TBP-associated factor 2","protein_coding"
"Glyma.05G022300","No alias","Glycine max","dentin sialophosphoprotein-related","protein_coding"
"Glyma.05G035100","No alias","Glycine max","BAH domain ;TFIIS helical bundle-like domain","protein_coding"
"Glyma.05G047400","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.05G060300","No alias","Glycine max","G2484-1 protein","protein_coding"
"Glyma.05G087600","No alias","Glycine max","ENTH/VHS family protein","protein_coding"
"Glyma.05G089300","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain","protein_coding"
"Glyma.05G185300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G220300","No alias","Glycine max","SH3 domain-containing protein","protein_coding"
"Glyma.05G224700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G241400","No alias","Glycine max","THO2","protein_coding"
"Glyma.06G025800","No alias","Glycine max","IQ-domain 32","protein_coding"
"Glyma.06G091300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G097800","No alias","Glycine max","binding","protein_coding"
"Glyma.06G107100","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.06G117700","No alias","Glycine max","histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)","protein_coding"
"Glyma.06G202500","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"Glyma.07G058400","No alias","Glycine max","formin homology 1","protein_coding"
"Glyma.07G088500","No alias","Glycine max","NSP (nuclear shuttle protein)-interacting GTPase","protein_coding"
"Glyma.07G122900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G132300","No alias","Glycine max","proteolysis 6","protein_coding"
"Glyma.07G134400","No alias","Glycine max","Pre-mRNA splicing Prp18-interacting factor","protein_coding"
"Glyma.07G164800","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.07G238900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G268200","No alias","Glycine max","binding","protein_coding"
"Glyma.08G003200","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding"
"Glyma.08G026700","No alias","Glycine max","SH3 domain-containing protein","protein_coding"
"Glyma.08G069400","No alias","Glycine max","oxoprolinase 1","protein_coding"
"Glyma.08G087600","No alias","Glycine max","ubiquitin-protein ligase 1","protein_coding"
"Glyma.08G097900","No alias","Glycine max","TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2","protein_coding"
"Glyma.08G111400","No alias","Glycine max","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"Glyma.08G139600","No alias","Glycine max","ENTH/VHS family protein","protein_coding"
"Glyma.08G162300","No alias","Glycine max","nuclear pore anchor","protein_coding"
"Glyma.08G173500","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Glyma.08G187500","No alias","Glycine max","UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups","protein_coding"
"Glyma.08G268300","No alias","Glycine max","pentatricopeptide (PPR) domain protein 40","protein_coding"
"Glyma.08G292900","No alias","Glycine max","SIN3-like 3","protein_coding"
"Glyma.08G315300","No alias","Glycine max","heat shock protein 70 (Hsp 70) family protein","protein_coding"
"Glyma.08G360000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G361500","No alias","Glycine max","glucan synthase-like 12","protein_coding"
"Glyma.09G014600","No alias","Glycine max","binding","protein_coding"
"Glyma.09G018300","No alias","Glycine max","Membrane trafficking VPS53 family protein","protein_coding"
"Glyma.09G042000","No alias","Glycine max","acyl-CoA dehydrogenase-related","protein_coding"
"Glyma.09G057700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G097600","No alias","Glycine max","homolog of yeast FIP1 [V]","protein_coding"
"Glyma.09G123500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G134200","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.09G169600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G182600","No alias","Glycine max","zinc finger protein-related","protein_coding"
"Glyma.09G215100","No alias","Glycine max","actin binding","protein_coding"
"Glyma.09G224000","No alias","Glycine max","conserved oligomeric Golgi complex component-related / COG complex component-related","protein_coding"
"Glyma.09G242200","No alias","Glycine max","ARABIDILLO-1","protein_coding"
"Glyma.09G257900","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.09G267100","No alias","Glycine max","WD-40 repeat family protein / beige-related","protein_coding"
"Glyma.09G268000","No alias","Glycine max","SMAD/FHA domain-containing protein","protein_coding"
"Glyma.09G268400","No alias","Glycine max","SEC7-like guanine nucleotide exchange family protein","protein_coding"
"Glyma.09G269900","No alias","Glycine max","galacturonosyltransferase 7","protein_coding"
"Glyma.09G275100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.09G278500","No alias","Glycine max","HEAT repeat ;WD domain, G-beta repeat protein protein","protein_coding"
"Glyma.09G284900","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.10G012000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.10G024500","No alias","Glycine max","Tudor/PWWP/MBT domain-containing protein","protein_coding"
"Glyma.10G041700","No alias","Glycine max","myosin 2","protein_coding"
"Glyma.10G073700","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.10G137800","No alias","Glycine max","Albino or Glassy Yellow 1","protein_coding"
"Glyma.10G172400","No alias","Glycine max","ubiquitin-specific protease 9","protein_coding"
"Glyma.10G199300","No alias","Glycine max","Coatomer, alpha subunit","protein_coding"
"Glyma.10G239500","No alias","Glycine max","valyl-tRNA synthetase / valine--tRNA ligase (VALRS)","protein_coding"
"Glyma.10G243400","No alias","Glycine max","protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases","protein_coding"
"Glyma.10G284200","No alias","Glycine max","Ataxia telangiectasia-mutated and RAD3-related","protein_coding"
"Glyma.10G292300","No alias","Glycine max","SAC3/GANP/Nin1/mts3/eIF-3 p25 family","protein_coding"
"Glyma.11G004100","No alias","Glycine max","Homeotic gene regulator","protein_coding"
"Glyma.11G005500","No alias","Glycine max","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein","protein_coding"
"Glyma.11G032900","No alias","Glycine max","RGPR-related","protein_coding"
"Glyma.11G040200","No alias","Glycine max","RNA helicase, putative","protein_coding"
"Glyma.11G081500","No alias","Glycine max","phospholipase D delta","protein_coding"
"Glyma.11G102000","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.11G109800","No alias","Glycine max","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Glyma.11G157400","No alias","Glycine max","protein kinases;ubiquitin-protein ligases","protein_coding"
"Glyma.11G248200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G088600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G027800","No alias","Glycine max","ubiquitin-specific protease 13","protein_coding"
"Glyma.13G127600","No alias","Glycine max","RPM1 interacting protein 13","protein_coding"
"Glyma.13G130000","No alias","Glycine max","CLIP-associated protein","protein_coding"
"Glyma.13G156600","No alias","Glycine max","Protein of unknown function (DUF1336)","protein_coding"
"Glyma.13G241800","No alias","Glycine max","proline-rich spliceosome-associated (PSP) family protein","protein_coding"
"Glyma.13G366100","No alias","Glycine max","Pre-mRNA-processing-splicing factor","protein_coding"
"Glyma.14G050200","No alias","Glycine max","histone mono-ubiquitination 2","protein_coding"
"Glyma.14G058300","No alias","Glycine max","Clathrin, heavy chain","protein_coding"
"Glyma.14G126800","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.14G183000","No alias","Glycine max","ubiquitin-protein ligase 2","protein_coding"
"Glyma.14G216900","No alias","Glycine max","LSD1-like 3","protein_coding"
"Glyma.14G217900","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding"
"Glyma.15G000300","No alias","Glycine max","histone acetyltransferase of the CBP family 12","protein_coding"
"Glyma.15G007100","No alias","Glycine max","Pre-mRNA-processing-splicing factor","protein_coding"
"Glyma.15G049500","No alias","Glycine max","tubby like protein 10","protein_coding"
"Glyma.15G093600","No alias","Glycine max","cullin4","protein_coding"
"Glyma.15G122400","No alias","Glycine max","varicose-related","protein_coding"
"Glyma.15G136900","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.15G142600","No alias","Glycine max","WD40/YVTN repeat-like-containing domain;Bromodomain","protein_coding"
"Glyma.15G253800","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Glyma.16G022000","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.16G039900","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.16G074700","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.16G102300","No alias","Glycine max","suppressor of abi3-5","protein_coding"
"Glyma.17G005500","No alias","Glycine max","binding","protein_coding"
"Glyma.17G044000","No alias","Glycine max","HOPM interactor 7","protein_coding"
"Glyma.17G045100","No alias","Glycine max","sec34-like family protein","protein_coding"
"Glyma.17G112500","No alias","Glycine max","WUS-interacting protein 2","protein_coding"
"Glyma.17G118700","No alias","Glycine max","3-ketoacyl-CoA synthase 11","protein_coding"
"Glyma.17G123700","No alias","Glycine max","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein","protein_coding"
"Glyma.17G129200","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.17G176300","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.17G187400","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain","protein_coding"
"Glyma.17G205700","No alias","Glycine max","LisH dimerisation motif;WD40/YVTN repeat-like-containing domain","protein_coding"
"Glyma.17G208500","No alias","Glycine max","Tesmin/TSO1-like CXC domain-containing protein","protein_coding"
"Glyma.17G228100","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.18G009000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G017600","No alias","Glycine max","peroxisomal ABC transporter 1","protein_coding"
"Glyma.18G130400","No alias","Glycine max","SIN3-like 4","protein_coding"
"Glyma.18G183900","No alias","Glycine max","Pre-mRNA splicing Prp18-interacting factor","protein_coding"
"Glyma.18G232900","No alias","Glycine max","RNA polymerase II transcription mediators","protein_coding"
"Glyma.18G297900","No alias","Glycine max","HEAT repeat-containing protein","protein_coding"
"Glyma.19G001700","No alias","Glycine max","methionine aminopeptidase 2B","protein_coding"
"Glyma.19G004700","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.19G007300","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.19G010200","No alias","Glycine max","methyl-CPG-binding domain 9","protein_coding"
"Glyma.19G014100","No alias","Glycine max","CRM family member 2","protein_coding"
"Glyma.19G016300","No alias","Glycine max","SIN3-like 2","protein_coding"
"Glyma.19G037700","No alias","Glycine max","WPP domain-interacting protein 1","protein_coding"
"Glyma.19G064500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.19G130100","No alias","Glycine max","microtubule-associated proteins 70-1","protein_coding"
"Glyma.19G208700","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.19G229200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G019300","No alias","Glycine max","transcription activators","protein_coding"
"Glyma.20G189500","No alias","Glycine max","Dihydrolipoamide acetyltransferase, long form protein","protein_coding"
"Glyma.20G190900","No alias","Glycine max","Coatomer, alpha subunit","protein_coding"
"Glyma.20G221000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G000713","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G001109","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G009563","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G017404","No alias","Zea mays","BTB/POZ domain-containing protein","protein_coding"
"GRMZM2G023275","No alias","Zea mays","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"GRMZM2G026442","No alias","Zea mays","Phox-associated domain;Phox-like;Sorting nexin, C-terminal","protein_coding"
"GRMZM2G029186","No alias","Zea mays","varicose-related","protein_coding"
"GRMZM2G035563","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G036966","No alias","Zea mays","DNA-binding storekeeper protein-related transcriptional regulator","protein_coding"
"GRMZM2G042681","No alias","Zea mays","Ribosomal RNA processing Brix domain protein","protein_coding"
"GRMZM2G044733","No alias","Zea mays","Autophagy-related protein 13","protein_coding"
"GRMZM2G045090","No alias","Zea mays","oxoprolinase 1","protein_coding"
"GRMZM2G045404","No alias","Zea mays","indole-3-butyric acid response 5","protein_coding"
"GRMZM2G048243","No alias","Zea mays","protein tyrosine kinase family protein","protein_coding"
"GRMZM2G050218","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G070881","No alias","Zea mays","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding"
"GRMZM2G075528","No alias","Zea mays","Integral membrane Yip1 family protein","protein_coding"
"GRMZM2G081013","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G082962","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G085691","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G087482","No alias","Zea mays","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein","protein_coding"
"GRMZM2G096972","No alias","Zea mays","Cleavage and polyadenylation specificity factor (CPSF) A subunit protein","protein_coding"
"GRMZM2G098577","No alias","Zea mays","MIF4G domain-containing protein / MA3 domain-containing protein","protein_coding"
"GRMZM2G099187","No alias","Zea mays","SEUSS-like 2","protein_coding"
"GRMZM2G099355","No alias","Zea mays","Pre-mRNA-processing-splicing factor","protein_coding"
"GRMZM2G100872","No alias","Zea mays","radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein","protein_coding"
"GRMZM2G101523","No alias","Zea mays","phosphoinositide binding","protein_coding"
"GRMZM2G106881","No alias","Zea mays","zinc finger protein-related","protein_coding"
"GRMZM2G113156","No alias","Zea mays","SMAD/FHA domain-containing protein","protein_coding"
"GRMZM2G114192","No alias","Zea mays","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain","protein_coding"
"GRMZM2G115698","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G116053","No alias","Zea mays","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"GRMZM2G117441","No alias","Zea mays","DNA/RNA-binding protein Kin17, conserved region","protein_coding"
"GRMZM2G119305","No alias","Zea mays","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding"
"GRMZM2G119745","No alias","Zea mays","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"GRMZM2G120579","No alias","Zea mays","uridylyltransferase-related","protein_coding"
"GRMZM2G121074","No alias","Zea mays","ARM repeat superfamily protein","protein_coding"
"GRMZM2G125935","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G126839","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G130773","No alias","Zea mays","Mitochondrial transcription termination factor family protein","protein_coding"
"GRMZM2G133421","No alias","Zea mays","lipid transporters","protein_coding"
"GRMZM2G133464","No alias","Zea mays","protein phosphatase 2A-2","protein_coding"
"GRMZM2G138178","No alias","Zea mays","phytochrome and flowering time regulatory protein (PFT1)","protein_coding"
"GRMZM2G144166","No alias","Zea mays","embryo defective 2423","protein_coding"
"GRMZM2G145300","No alias","Zea mays","TRAF-like superfamily protein","protein_coding"
"GRMZM2G152373","No alias","Zea mays","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"GRMZM2G158437","No alias","Zea mays","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"GRMZM2G175313","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G301246","No alias","Zea mays","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"GRMZM2G303752","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G312009","No alias","Zea mays","Guanylate-binding family protein","protein_coding"
"GRMZM2G317835","No alias","Zea mays","ubiquitin-conjugating enzyme 23","protein_coding"
"GRMZM2G321767","No alias","Zea mays","DHHC-type zinc finger family protein","protein_coding"
"GRMZM2G351125","No alias","Zea mays","translocon at the outer envelope membrane of chloroplasts 159","protein_coding"
"GRMZM2G362718","No alias","Zea mays","ENHANCED DOWNY MILDEW 2","protein_coding"
"GRMZM2G376067","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G399320","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G415215","No alias","Zea mays","Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain","protein_coding"
"GRMZM2G423972","No alias","Zea mays","formate dehydrogenase","protein_coding"
"GRMZM2G427097","No alias","Zea mays","glutamate dehydrogenase 2","protein_coding"
"GRMZM2G433801","No alias","Zea mays","Pre-mRNA-processing-splicing factor","protein_coding"
"GRMZM2G457697","No alias","Zea mays","enhancer of rudimentary protein, putative","protein_coding"
"GRMZM2G460090","No alias","Zea mays","HEAT repeat ;WD domain, G-beta repeat protein protein","protein_coding"
"GRMZM2G467159","No alias","Zea mays","N-MYC downregulated-like 1","protein_coding"
"GRMZM2G474544","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G474798","No alias","Zea mays","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"GRMZM5G813651","No alias","Zea mays","NAC domain containing protein 35","protein_coding"
"GRMZM5G842007","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G868981","No alias","Zea mays","Ran BP2/NZF zinc finger-like superfamily protein","protein_coding"
"GRMZM5G874568","No alias","Zea mays","Function unknown","protein_coding"
"HORVU0Hr1G015840.1","No alias","Hordeum vulgare","exoribonuclease *(RNase J)","protein_coding"
"HORVU0Hr1G039620.22","No alias","Hordeum vulgare","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU1Hr1G010280.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G015590.1","No alias","Hordeum vulgare","gamma-glutamyl","protein_coding"
"HORVU1Hr1G043920.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G053090.17","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G055000.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G008140.6","No alias","Hordeum vulgare","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G038480.14","No alias","Hordeum vulgare","regulatory protein *(TIC) of circadian clock","protein_coding"
"HORVU2Hr1G061710.11","No alias","Hordeum vulgare","ubiquitin-binding adaptor *(UFD3)","protein_coding"
"HORVU2Hr1G089710.9","No alias","Hordeum vulgare","M28-class carboxypeptidase","protein_coding"
"HORVU2Hr1G098880.1","No alias","Hordeum vulgare","GABA pyruvate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"HORVU2Hr1G127340.1","No alias","Hordeum vulgare","chromatin remodeling factor *(ERCC6)","protein_coding"
"HORVU3Hr1G030490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G075250.1","No alias","Hordeum vulgare","deubiquitinase *(UBP12-13) & deubiquitinase *(UBP12-13)","protein_coding"
"HORVU3Hr1G117890.7","No alias","Hordeum vulgare","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G035610.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G079300.66","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G014920.3","No alias","Hordeum vulgare","cyclic pyranopterin monophosphate synthase *(CNX2)","protein_coding"
"HORVU5Hr1G056130.2","No alias","Hordeum vulgare","WRKY-type transcription factor","protein_coding"
"HORVU5Hr1G058160.6","No alias","Hordeum vulgare","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"HORVU5Hr1G074360.8","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G089950.4","No alias","Hordeum vulgare","DNA helicase *(MOM1)","protein_coding"
"HORVU6Hr1G013240.3","No alias","Hordeum vulgare","LON-type protease","protein_coding"
"HORVU6Hr1G013710.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G034660.8","No alias","Hordeum vulgare","component *(ATG2) of autophagosome ATG9-2-18 membrane shuttling complex","protein_coding"
"HORVU6Hr1G088440.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU7Hr1G019280.3","No alias","Hordeum vulgare","monosaccharide transporter *(STP)","protein_coding"
"HORVU7Hr1G039260.1","No alias","Hordeum vulgare","glycosyltransferase (QUA1) involved in pectin-dependent cell adhesion","protein_coding"
"HORVU7Hr1G076680.1","No alias","Hordeum vulgare","EC_3.2 glycosylase & glucosylceramidase *(GCD)","protein_coding"
"HORVU7Hr1G083490.8","No alias","Hordeum vulgare","acyl CoA oxidase *(ACX) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"HORVU7Hr1G097430.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00002_0350","kfl00002_0350_v1.1","Klebsormidium nitens","(at5g14950 : 906.0) Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans.; golgi alpha-mannosidase II (GMII); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G66150.1); Has 2033 Blast hits to 1987 proteins in 497 species: Archae - 20; Bacteria - 870; Metazoa - 708; Fungi - 131; Plants - 147; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 1812.0) &  (original description: no original description)","protein_coding"
"Kfl00003_0430","kfl00003_0430_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00004_0260","kfl00004_0260_v1.1","Klebsormidium nitens","(at2g46560 : 295.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0490","kfl00005_0490_v1.1","Klebsormidium nitens","(at5g42000 : 201.0) ORMDL family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding; LOCATED IN: integral to membrane, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ORMDL (InterPro:IPR007203); BEST Arabidopsis thaliana protein match is: ORMDL family protein (TAIR:AT1G01230.1); Has 531 Blast hits to 531 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 274; Fungi - 143; Plants - 90; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00006_0100","kfl00006_0100_v1.1","Klebsormidium nitens","(at1g77680 : 558.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (reliability: 1116.0) &  (original description: no original description)","protein_coding"
"Kfl00008_0560","kfl00008_0560_v1.1","Klebsormidium nitens","(q949g3|pdr1_nicpl : 408.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g16340 : 404.0) pleiotropic drug resistance 1 (PDR1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), Pleiotropic drug resistance protein PDR (InterPro:IPR005285), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1). & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"Kfl00012_0460","kfl00012_0460_v1.1","Klebsormidium nitens","(at2g26890 : 2400.0) GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis.  grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.; GRAVITROPISM DEFECTIVE 2 (GRV2); FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: in 10 processes; LOCATED IN: in 6 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 4800.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0015","kfl00013_0015_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00014_0410","kfl00014_0410_v1.1","Klebsormidium nitens","(at5g47490 : 356.0) RGPR-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: RGPR-related (TAIR:AT5G47480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"Kfl00016_0400","kfl00016_0400_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00020_0480","kfl00020_0480_v1.1","Klebsormidium nitens","(at3g26560 : 1414.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 2828.0) &  (original description: no original description)","protein_coding"
"Kfl00021_0090","kfl00021_0090_v1.1","Klebsormidium nitens","(at1g21380 : 243.0) Target of Myb protein 1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Target of Myb protein 1 (InterPro:IPR014645), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: Target of Myb protein 1 (TAIR:AT1G76970.1); Has 1707 Blast hits to 1699 proteins in 198 species: Archae - 0; Bacteria - 6; Metazoa - 892; Fungi - 452; Plants - 279; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0250","kfl00024_0250_v1.1","Klebsormidium nitens","(p93422|syh_orysa : 543.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (at3g02760 : 499.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0170","kfl00029_0170_v1.1","Klebsormidium nitens","(q9sc19|uptg1_soltu : 647.0) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) - Solanum tuberosum (Potato) & (at3g02230 : 633.0) reversibly glycosylated polypeptide possibly involved in plant cell wall synthesis; reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1266.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0235","kfl00031_0235_v1.1","Klebsormidium nitens","(at1g70460 : 197.0) root hair specific 10 (RHS10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G70450.1); Has 376121 Blast hits to 219094 proteins in 6322 species: Archae - 675; Bacteria - 71771; Metazoa - 140962; Fungi - 47170; Plants - 60341; Viruses - 7360; Other Eukaryotes - 47842 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 153.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0350","kfl00032_0350_v1.1","Klebsormidium nitens","(at4g05420 : 1610.0) Structurally similar to damaged DNA binding proteins.DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis.; damaged DNA binding protein 1A (DDB1A); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: negative regulation of transcription, negative regulation of photomorphogenesis; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1B (TAIR:AT4G21100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xwp1|cpsf1_orysa : 92.8) Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) - Oryza sativa (Rice) & (reliability: 3220.0) &  (original description: no original description)","protein_coding"
"Kfl00043_0030","kfl00043_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00045_0430","kfl00045_0430_v1.1","Klebsormidium nitens","(at1g62020 : 1226.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 95.5) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2452.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0250","kfl00046_0250_v1.1","Klebsormidium nitens","(o24534|ef1a_vicfa : 816.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (at5g60390 : 811.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1622.0) &  (original description: no original description)","protein_coding"
"Kfl00048_0480","kfl00048_0480_v1.1","Klebsormidium nitens","(at3g02090 : 607.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (p29677|mppa_soltu : 197.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"Kfl00052_0410","kfl00052_0410_v1.1","Klebsormidium nitens","(at3g62200 : 161.0) Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain (TAIR:AT5G61190.1); Has 3997 Blast hits to 3396 proteins in 338 species: Archae - 0; Bacteria - 122; Metazoa - 1660; Fungi - 937; Plants - 691; Viruses - 43; Other Eukaryotes - 544 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0140","kfl00054_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00056_0300","kfl00056_0300_v1.1","Klebsormidium nitens","(p93253|sahh_mescr : 778.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Mesembryanthemum crystallinum (Common ice plant) & (at3g23810 : 773.0) S-adenosyl-l-homocysteine (SAH) hydrolase 2 (SAHH2); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: one-carbon metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-homocysteine hydrolase (TAIR:AT4G13940.1); Has 7939 Blast hits to 7933 proteins in 1466 species: Archae - 229; Bacteria - 2315; Metazoa - 640; Fungi - 145; Plants - 247; Viruses - 0; Other Eukaryotes - 4363 (source: NCBI BLink). & (reliability: 1546.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0050","kfl00057_0050_v1.1","Klebsormidium nitens","(at2g18510 : 375.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (p28644|roc1_spiol : 96.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"Kfl00063_0010","kfl00063_0010_v1.1","Klebsormidium nitens","(at5g66990 : 94.0) RWP-RK domain-containing protein; CONTAINS InterPro DOMAIN/s: Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: RWP-RK domain-containing protein (TAIR:AT1G74480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"Kfl00064_0260","kfl00064_0260_v1.1","Klebsormidium nitens","(at5g21080 : 326.0) Uncharacterized protein; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 304 Blast hits to 292 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 137; Fungi - 19; Plants - 133; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"Kfl00074_0080","kfl00074_0080_v1.1","Klebsormidium nitens","(at2g42490 : 421.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1554 Blast hits to 1550 proteins in 277 species: Archae - 14; Bacteria - 379; Metazoa - 243; Fungi - 461; Plants - 232; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (q43077|amo_pea : 201.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"Kfl00074_0110","kfl00074_0110_v1.1","Klebsormidium nitens","(at3g01780 : 1108.0) Encodes TPLATE, a cytokinesis protein targeted to the cell plate.  Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.; TPLATE; FUNCTIONS IN: binding; INVOLVED IN: pollen development, cytokinesis; LOCATED IN: nucleus, plasma membrane, cell plate, cytoplasm, phragmoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 18574 Blast hits to 8761 proteins in 652 species: Archae - 63; Bacteria - 685; Metazoa - 7555; Fungi - 1758; Plants - 703; Viruses - 446; Other Eukaryotes - 7364 (source: NCBI BLink). & (reliability: 2216.0) &  (original description: no original description)","protein_coding"
"Kfl00074_0170","kfl00074_0170_v1.1","Klebsormidium nitens","(at5g23110 : 742.0) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68872 : 317.0) no description available & (gnl|cdd|37801 : 94.3) no description available & (reliability: 1484.0) &  (original description: no original description)","protein_coding"
"Kfl00077_0110","kfl00077_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00080_0090","kfl00080_0090_v1.1","Klebsormidium nitens","(at1g56070 : 1415.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1407.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2830.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0170","kfl00080_0170_v1.1","Klebsormidium nitens","(at5g64270 : 1942.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3884.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0220","kfl00080_0220_v1.1","Klebsormidium nitens","(at4g01090 : 138.0) Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT1G01440.1); Has 1545 Blast hits to 1451 proteins in 231 species: Archae - 0; Bacteria - 62; Metazoa - 476; Fungi - 316; Plants - 452; Viruses - 2; Other Eukaryotes - 237 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"Kfl00083_0010","kfl00083_0010_v1.1","Klebsormidium nitens","(at3g07100 : 780.0) Encodes SEC24a/ERMO2.  Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (reliability: 1560.0) &  (original description: no original description)","protein_coding"
"Kfl00084_0030","kfl00084_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00085_0250","kfl00085_0250_v1.1","Klebsormidium nitens","(at1g48410 : 963.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs.  There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC).  Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the  regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (reliability: 1926.0) &  (original description: no original description)","protein_coding"
"Kfl00089_0170","kfl00089_0170_v1.1","Klebsormidium nitens","(at5g11850 : 247.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein tyrosine kinase family protein (TAIR:AT1G73660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 108.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"Kfl00096_0060","kfl00096_0060_v1.1","Klebsormidium nitens","(at3g12120 : 436.0) Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5.  Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; fatty acid desaturase 2 (FAD2); FUNCTIONS IN: omega-6 fatty acid desaturase activity, delta12-fatty acid dehydrogenase activity; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 3 (TAIR:AT2G29980.1); Has 2431 Blast hits to 2431 proteins in 654 species: Archae - 0; Bacteria - 821; Metazoa - 31; Fungi - 266; Plants - 965; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink). & (p48630|fd6e1_soybn : 424.0) Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 (EC 1.14.19.-) - Glycine max (Soybean) & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"Kfl00097_0160","kfl00097_0160_v1.1","Klebsormidium nitens","(at1g29940 : 1093.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (q8ma12|rpob_chagl : 133.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Chaetosphaeridium globosum & (reliability: 2186.0) &  (original description: no original description)","protein_coding"
"Kfl00098_0070","kfl00098_0070_v1.1","Klebsormidium nitens","(at4g16340 : 532.0) mutant has Seedling lethal; Cotyledon, leaf-shape, trichome defects; Putative Cytoskeletal Protein; SPIKE1 (SPK1); FUNCTIONS IN: GTPase binding, GTP binding, guanyl-nucleotide exchange factor activity; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dedicator of cytokinesis (InterPro:IPR010703); Has 1667 Blast hits to 1104 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 1334; Fungi - 77; Plants - 63; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"Kfl00100_0070","kfl00100_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00102_0100","kfl00102_0100_v1.1","Klebsormidium nitens","(at1g20960 : 2806.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 5612.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0070","kfl00137_0070_v1.1","Klebsormidium nitens","(at3g07300 : 432.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT2G44070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"Kfl00139_0250","kfl00139_0250_v1.1","Klebsormidium nitens","(at1g50500 : 840.0) encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.; HEAT-INTOLERANT 1 (HIT1); CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal (InterPro:IPR007234); BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein (TAIR:AT1G50970.1). & (reliability: 1680.0) &  (original description: no original description)","protein_coding"
"Kfl00160_0180","kfl00160_0180_v1.1","Klebsormidium nitens","(at1g80930 : 703.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 1406.0) &  (original description: no original description)","protein_coding"
"Kfl00162_0090","kfl00162_0090_v1.1","Klebsormidium nitens","(at2g02560 : 713.0) Arabidopsis thaliana homolog of human  CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1426.0) &  (original description: no original description)","protein_coding"
"Kfl00163_0220","kfl00163_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00163_g4","kfl00163_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00167_0090","kfl00167_0090_v1.1","Klebsormidium nitens","(at5g03650 : 1167.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 1120.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 2334.0) &  (original description: no original description)","protein_coding"
"Kfl00169_0020","kfl00169_0020_v1.1","Klebsormidium nitens","(p52780|syq_luplu : 1004.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 994.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (reliability: 1988.0) &  (original description: no original description)","protein_coding"
"Kfl00173_0300","kfl00173_0300_v1.1","Klebsormidium nitens","(at5g15530 : 147.0) biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,; biotin carboxyl carrier protein 2 (BCCP2); FUNCTIONS IN: biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: chloroplastic acetylcoenzyme A carboxylase 1 (TAIR:AT5G16390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42783|bccp_soybn : 116.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"Kfl00174_0120","kfl00174_0120_v1.1","Klebsormidium nitens","(at3g43300 : 1318.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein.  AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family.  The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells.  HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (reliability: 2636.0) &  (original description: no original description)","protein_coding"
"Kfl00178_0160","kfl00178_0160_v1.1","Klebsormidium nitens","(at3g62360 : 734.0) Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); Has 321 Blast hits to 256 proteins in 98 species: Archae - 6; Bacteria - 117; Metazoa - 138; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"Kfl00183_0190","kfl00183_0190_v1.1","Klebsormidium nitens","(at4g11270 : 359.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 718.0) &  (original description: no original description)","protein_coding"
"Kfl00208_0080","kfl00208_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00208_0130","kfl00208_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00209_0020","kfl00209_0020_v1.1","Klebsormidium nitens","(at1g64570 : 136.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"Kfl00209_0210","kfl00209_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00217_0150","kfl00217_0150_v1.1","Klebsormidium nitens","(at4g19210 : 1019.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2038.0) &  (original description: no original description)","protein_coding"
"Kfl00218_0010","kfl00218_0010_v1.1","Klebsormidium nitens","(at1g21630 : 119.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"Kfl00218_0020","kfl00218_0020_v1.1","Klebsormidium nitens","(at1g21630 : 149.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G20760.1). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00224_0160","kfl00224_0160_v1.1","Klebsormidium nitens","(at3g12010 : 358.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"Kfl00227_0060","kfl00227_0060_v1.1","Klebsormidium nitens","(at2g45540 : 892.0) WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1). & (reliability: 1784.0) &  (original description: no original description)","protein_coding"
"Kfl00234_0130","kfl00234_0130_v1.1","Klebsormidium nitens","(at3g15840 : 239.0) Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.; post-illumination chlorophyll fluorescence increase (PIFI); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlororespiration; LOCATED IN: chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl00244_0050","kfl00244_0050_v1.1","Klebsormidium nitens","(at3g02260 : 865.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 1730.0) &  (original description: no original description)","protein_coding"
"Kfl00249_0010","kfl00249_0010_v1.1","Klebsormidium nitens","(at3g10390 : 622.0) Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.; FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). & (o64411|pao_maize : 107.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 1244.0) &  (original description: no original description)","protein_coding"
"Kfl00265_0060","kfl00265_0060_v1.1","Klebsormidium nitens","(at1g01040 : 525.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"Kfl00278_0040","kfl00278_0040_v1.1","Klebsormidium nitens","(at5g22750 : 995.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 94.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1808.0) &  (original description: no original description)","protein_coding"
"Kfl00308_0120","kfl00308_0120_v1.1","Klebsormidium nitens","(at5g56890 : 243.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24585|cri4_maize : 227.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"Kfl00329_0010","kfl00329_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00329_0080","kfl00329_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00341_0110","kfl00341_0110_v1.1","Klebsormidium nitens","(at1g58230 : 1027.0) binding; FUNCTIONS IN: binding; INVOLVED IN: signal transduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.2); Has 12369 Blast hits to 8547 proteins in 474 species: Archae - 22; Bacteria - 2638; Metazoa - 4211; Fungi - 2289; Plants - 1295; Viruses - 0; Other Eukaryotes - 1914 (source: NCBI BLink). & (reliability: 2054.0) &  (original description: no original description)","protein_coding"
"Kfl00350_0040","kfl00350_0040_v1.1","Klebsormidium nitens","(at5g56180 : 352.0) encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.; actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 9 (TAIR:AT2G42090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p30164|act1_pea : 121.0) Actin-1 - Pisum sativum (Garden pea) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"Kfl00359_0020","kfl00359_0020_v1.1","Klebsormidium nitens","(at5g14640 : 667.0) shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40518|msk1_tobac : 661.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (reliability: 1260.0) &  (original description: no original description)","protein_coding"
"Kfl00359_0040","kfl00359_0040_v1.1","Klebsormidium nitens","(at2g16950 : 996.0) Nuclear import receptor for AtGRP7.; transportin 1 (TRN1); CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1992.0) &  (original description: no original description)","protein_coding"
"Kfl00369_0110","kfl00369_0110_v1.1","Klebsormidium nitens","(at5g65750 : 1501.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3002.0) &  (original description: no original description)","protein_coding"
"Kfl00385_0030","kfl00385_0030_v1.1","Klebsormidium nitens","(at3g55200 : 1797.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 3594.0) &  (original description: no original description)","protein_coding"
"Kfl00395_0020","kfl00395_0020_v1.1","Klebsormidium nitens","(at3g27670 : 207.0) A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development.; RESURRECTION1 (RST1); FUNCTIONS IN: binding; INVOLVED IN: cuticle hydrocarbon biosynthetic process, embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 92 Blast hits to 88 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"Kfl00440_0050","kfl00440_0050_v1.1","Klebsormidium nitens","(at5g11700 : 501.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 1002.0) &  (original description: no original description)","protein_coding"
"Kfl00451_0090","kfl00451_0090_v1.1","Klebsormidium nitens","(at1g48090 : 1719.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 3438.0) &  (original description: no original description)","protein_coding"
"Kfl00458_g3","kfl00458_g3_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00461_0140","kfl00461_0140_v1.1","Klebsormidium nitens","(at1g80070 : 4182.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 8364.0) &  (original description: no original description)","protein_coding"
"Kfl00468_0080","kfl00468_0080_v1.1","Klebsormidium nitens","(at5g11560 : 621.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1242.0) &  (original description: no original description)","protein_coding"
"Kfl00486_0040","kfl00486_0040_v1.1","Klebsormidium nitens","(at5g26860 : 352.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790).  Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells.  Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (p93648|lonh2_maize : 349.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"Kfl00507_0030","kfl00507_0030_v1.1","Klebsormidium nitens","(at1g65440 : 900.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (reliability: 1800.0) &  (original description: no original description)","protein_coding"
"Kfl00508_0140","kfl00508_0140_v1.1","Klebsormidium nitens","(at3g61700 : 126.0) Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT2G46420.1); Has 265 Blast hits to 263 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 223; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"Kfl00544_0030","kfl00544_0030_v1.1","Klebsormidium nitens","(at3g16620 : 263.0) component of TOC complex, plastid protein import machinery.; translocon outer complex protein 120 (TOC120); FUNCTIONS IN: GTP binding; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 2198 Blast hits to 1948 proteins in 385 species: Archae - 12; Bacteria - 407; Metazoa - 712; Fungi - 212; Plants - 332; Viruses - 5; Other Eukaryotes - 518 (source: NCBI BLink). & (q41009|toc34_pea : 118.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"Kfl00546_0030","kfl00546_0030_v1.1","Klebsormidium nitens","(p29677|mppa_soltu : 395.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 389.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl00560_0040","kfl00560_0040_v1.1","Klebsormidium nitens","(at3g19170 : 1188.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (reliability: 2376.0) &  (original description: no original description)","protein_coding"
"Kfl00589_0060","kfl00589_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00651_0020","kfl00651_0020_v1.1","Klebsormidium nitens","(at4g26270 : 629.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"Kfl00654_0040","kfl00654_0040_v1.1","Klebsormidium nitens","(at1g27752 : 189.0) Ubiquitin system component Cue protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"Kfl00667_0010","kfl00667_0010_v1.1","Klebsormidium nitens","(at4g13430 : 720.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1440.0) &  (original description: no original description)","protein_coding"
"Kfl00674_0010","kfl00674_0010_v1.1","Klebsormidium nitens","(p93338|gapn_nicpl : 823.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 814.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (reliability: 1628.0) &  (original description: no original description)","protein_coding"
"Kfl00727_0080","kfl00727_0080_v1.1","Klebsormidium nitens","(at5g38840 : 225.0) SMAD/FHA domain-containing protein ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein  (TAIR:AT5G47790.1); Has 18317 Blast hits to 13795 proteins in 1254 species: Archae - 157; Bacteria - 2798; Metazoa - 7417; Fungi - 1475; Plants - 704; Viruses - 54; Other Eukaryotes - 5712 (source: NCBI BLink). & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"Kfl00780_0030","kfl00780_0030_v1.1","Klebsormidium nitens","(at1g55860 : 726.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"Kfl00868_0030","kfl00868_0030_v1.1","Klebsormidium nitens","(at3g25900 : 87.0) HMT-1; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1). & (q9fum7|hmt4_maize : 85.1) Homocysteine S-methyltransferase 4 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 4) (SMM:Hcy S-methyltransferase 4) (ZmHMT-4) - Zea mays (Maize) & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"Kfl00874_0010","kfl00874_0010_v1.1","Klebsormidium nitens","(at2g19450 : 467.0) Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion  mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development.; TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 951 Blast hits to 945 proteins in 279 species: Archae - 0; Bacteria - 104; Metazoa - 315; Fungi - 305; Plants - 83; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 934.0) &  (original description: no original description)","protein_coding"
"Kfl00880_0010","kfl00880_0010_v1.1","Klebsormidium nitens","(at2g29200 : 533.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (reliability: 1066.0) &  (original description: no original description)","protein_coding"
"Kfl00955_0010","kfl00955_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00987_0050","kfl00987_0050_v1.1","Klebsormidium nitens","(at5g22770 : 768.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 1536.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g02860","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g03570","No alias","Oryza sativa","transcription factor X1, putative, expressed","protein_coding"
"LOC_Os01g34350","No alias","Oryza sativa","RNA-dependent RNA polymerase, putative, expressed","protein_coding"
"LOC_Os01g47380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g47800","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding"
"LOC_Os01g55310","No alias","Oryza sativa","haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed","protein_coding"
"LOC_Os01g67520","No alias","Oryza sativa","VTC2, putative, expressed","protein_coding"
"LOC_Os02g17680","No alias","Oryza sativa","ethylene-responsive protein related, putative, expressed","protein_coding"
"LOC_Os02g17940","No alias","Oryza sativa","leucoanthocyanidin dioxygenase, putative, expressed","protein_coding"
"LOC_Os02g39340","No alias","Oryza sativa","glycine-rich protein, putative, expressed","protein_coding"
"LOC_Os02g47860","No alias","Oryza sativa","uridine kinase, putative, expressed","protein_coding"
"LOC_Os02g47940","No alias","Oryza sativa","aminotransferase, classes I and II, domain containing protein, expressed","protein_coding"
"LOC_Os03g08550","No alias","Oryza sativa","STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed","protein_coding"
"LOC_Os03g10224","No alias","Oryza sativa","MT-A70 domain containing protein, expressed","protein_coding"
"LOC_Os03g26960","No alias","Oryza sativa","intron-binding protein aquarius, putative, expressed","protein_coding"
"LOC_Os03g27390","No alias","Oryza sativa","CPuORF35 - conserved peptide uORF-containing transcript, expressed","protein_coding"
"LOC_Os03g57900","No alias","Oryza sativa","zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed","protein_coding"
"LOC_Os05g03050","No alias","Oryza sativa","DNA repair protein Rad51, putative, expressed","protein_coding"
"LOC_Os05g07050","No alias","Oryza sativa","pre-mRNA-processing-splicing factor 8, putative, expressed","protein_coding"
"LOC_Os05g19270","No alias","Oryza sativa","MSH-like DNA mismatch repair protein, putative, expressed","protein_coding"
"LOC_Os05g24180","No alias","Oryza sativa","retrotransposon, putative, centromere-specific","protein_coding"
"LOC_Os05g42210","No alias","Oryza sativa","serine/threonine-protein kinase receptor precursor, putative, expressed","protein_coding"
"LOC_Os06g07080","No alias","Oryza sativa","pre-mRNA-processing-splicing factor 8, putative, expressed","protein_coding"
"LOC_Os06g09370","No alias","Oryza sativa","PTF1, putative, expressed","protein_coding"
"LOC_Os06g37160","No alias","Oryza sativa","transmembrane 9 superfamily member, putative, expressed","protein_coding"
"LOC_Os06g51100","No alias","Oryza sativa","transmembrane protein, putative, expressed","protein_coding"
"LOC_Os07g23780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g32730","No alias","Oryza sativa","DNA repair protein rhp16, putative, expressed","protein_coding"
"LOC_Os08g08050","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os08g10570","No alias","Oryza sativa","bifunctional purine biosynthesis protein purH, putative, expressed","protein_coding"
"LOC_Os09g33690","No alias","Oryza sativa","Os9bglu32 - beta-glucosidase homologue, similar to G. max hydroxyisourate hydrolase, expressed","protein_coding"
"LOC_Os10g35480","No alias","Oryza sativa","lanC-like protein 2, putative, expressed","protein_coding"
"LOC_Os10g42100","No alias","Oryza sativa","pyruvate kinase, putative, expressed","protein_coding"
"LOC_Os11g03910","No alias","Oryza sativa","zinc finger DHHC domain-containing protein, putative, expressed","protein_coding"
"LOC_Os11g07450","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os11g07500","No alias","Oryza sativa","DSHCT domain containing protein, expressed","protein_coding"
"LOC_Os11g08330","No alias","Oryza sativa","POLD1 - Putative DNA polymerase delta catalytic subunit, expressed","protein_coding"
"LOC_Os11g10400","No alias","Oryza sativa","OsFBX419 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os12g29580","No alias","Oryza sativa","AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os12g38440","No alias","Oryza sativa","XH domain containing protein, expressed","protein_coding"
"LOC_Os12g38940","No alias","Oryza sativa","ZOS12-06 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os12g40560","No alias","Oryza sativa","KH domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g41950","No alias","Oryza sativa","auxin response factor, putative, expressed","protein_coding"
"MA_100608g0010","No alias","Picea abies","(at1g55270 : 678.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 9614 Blast hits to 5501 proteins in 487 species: Archae - 10; Bacteria - 408; Metazoa - 7370; Fungi - 10; Plants - 1320; Viruses - 170; Other Eukaryotes - 326 (source: NCBI BLink). & (reliability: 1356.0) &  (original description: no original description)","protein_coding"
"MA_101292g0010","No alias","Picea abies","(at1g70620 : 109.0) cyclin-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"MA_102917g0010","No alias","Picea abies","(at1g33980 : 205.0) Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD); UPF3; FUNCTIONS IN: nucleotide binding; INVOLVED IN: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Regulator of nonsense-mediated decay, UPF3 (InterPro:IPR005120); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"MA_10293408g0010","No alias","Picea abies","(at5g16820 : 253.0) Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP.  Required early in the stress response for transient expression of heat shock genes.; heat shock factor 3 (HSF3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1E (TAIR:AT3G02990.1); Has 2455 Blast hits to 2420 proteins in 254 species: Archae - 0; Bacteria - 23; Metazoa - 373; Fungi - 496; Plants - 855; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink). & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"MA_10425891g0010","No alias","Picea abies","(at3g02260 : 1886.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 3772.0) &  (original description: no original description)","protein_coding"
"MA_10427682g0010","No alias","Picea abies","(at5g44800 : 274.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 172.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"MA_10428032g0010","No alias","Picea abies","(at5g55100 : 228.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147), SWAP/Surp (InterPro:IPR000061); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"MA_10428046g0010","No alias","Picea abies","(at2g23740 : 335.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (q8s4p6|ez1_maize : 82.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"MA_10428226g0010","No alias","Picea abies","(at2g23740 : 652.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (q8s4p6|ez1_maize : 83.6) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"MA_10428588g0010","No alias","Picea abies","(at4g32620 : 346.0) Enhancer of polycomb-like transcription factor protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT5G04670.1); Has 578 Blast hits to 531 proteins in 105 species: Archae - 0; Bacteria - 30; Metazoa - 78; Fungi - 45; Plants - 268; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"MA_10429149g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10429315g0010","No alias","Picea abies","(at2g26430 : 430.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 860.0) &  (original description: no original description)","protein_coding"
"MA_10429337g0010","No alias","Picea abies","(at2g32910 : 125.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"MA_10429404g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10429553g0010","No alias","Picea abies","(at2g26280 : 325.0) smr (Small MutS Related) domain-containing protein mRNA, complete cds; CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"MA_10429726g0010","No alias","Picea abies","(at2g19260 : 92.4) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, CW-type (InterPro:IPR011124), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1801 Blast hits to 1744 proteins in 174 species: Archae - 2; Bacteria - 8; Metazoa - 1171; Fungi - 140; Plants - 342; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"MA_10429775g0010","No alias","Picea abies","(at2g46240 : 82.8) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 6 (BAG6); CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 5 (TAIR:AT1G12060.1); Has 21821 Blast hits to 15371 proteins in 1199 species: Archae - 184; Bacteria - 2603; Metazoa - 10110; Fungi - 2300; Plants - 994; Viruses - 95; Other Eukaryotes - 5535 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"MA_10429775g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10429951g0010","No alias","Picea abies","(at5g26710 : 996.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (p52780|syq_luplu : 248.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 1992.0) &  (original description: no original description)","protein_coding"
"MA_10430089g0010","No alias","Picea abies","(at5g01110 : 355.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 315.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"MA_10430514g0010","No alias","Picea abies","(at5g10630 : 548.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Zinc finger, RanBP2-type (InterPro:IPR001876), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT1G18070.2). & (q41803|ef1a_maize : 273.0) Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) & (reliability: 1096.0) &  (original description: no original description)","protein_coding"
"MA_10430592g0010","No alias","Picea abies","(at5g64830 : 241.0) programmed cell death 2 C-terminal domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: apoptosis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Programmed cell death protein 2, C-terminal (InterPro:IPR007320); BEST Arabidopsis thaliana protein match is: zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein (TAIR:AT4G02220.1); Has 591 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 244; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"MA_10431488g0010","No alias","Picea abies","(at5g57990 : 470.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 940.0) &  (original description: no original description)","protein_coding"
"MA_10431815g0010","No alias","Picea abies","(at5g55040 : 175.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G20670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"MA_10432248g0010","No alias","Picea abies","(at1g28060 : 581.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (reliability: 1162.0) &  (original description: no original description)","protein_coding"
"MA_10432856g0030","No alias","Picea abies","(at5g55600 : 383.0) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: RNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2). & (reliability: 766.0) &  (original description: no original description)","protein_coding"
"MA_10433089g0010","No alias","Picea abies","(q5z987|atr_orysa : 2294.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (at5g40820 : 2235.0) Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.; Ataxia telangiectasia-mutated and RAD3-related (ATR); FUNCTIONS IN: protein serine/threonine kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: in 9 processes; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), UME (InterPro:IPR012993), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: ataxia-telangiectasia mutated (TAIR:AT3G48190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 4470.0) &  (original description: no original description)","protein_coding"
"MA_10433141g0010","No alias","Picea abies","(at2g32950 : 506.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 494.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"MA_10434186g0010","No alias","Picea abies","(at1g08620 : 809.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (reliability: 1618.0) &  (original description: no original description)","protein_coding"
"MA_10434679g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10434688g0010","No alias","Picea abies","(at1g58230 : 1924.0) binding; FUNCTIONS IN: binding; INVOLVED IN: signal transduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.2); Has 12369 Blast hits to 8547 proteins in 474 species: Archae - 22; Bacteria - 2638; Metazoa - 4211; Fungi - 2289; Plants - 1295; Viruses - 0; Other Eukaryotes - 1914 (source: NCBI BLink). & (reliability: 3848.0) &  (original description: no original description)","protein_coding"
"MA_10435152g0020","No alias","Picea abies","(at5g63320 : 289.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"MA_10435446g0010","No alias","Picea abies","(at2g23760 : 327.0) Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw2 and saw1 may act redundantly to repress BP in leaves.; BEL1-like homeodomain 4 (BLH4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeobox KN domain (InterPro:IPR008422), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 2 (TAIR:AT4G36870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"MA_10435451g0030","No alias","Picea abies","(at1g77800 : 374.0) PHD finger family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"MA_10435633g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435713g0020","No alias","Picea abies","(at5g19400 : 479.0) Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins.  SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis.  Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.; SMG7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, spindle assembly involved in meiosis, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2). & (reliability: 958.0) &  (original description: no original description)","protein_coding"
"MA_10435801g0010","No alias","Picea abies","(at4g18010 : 325.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.; INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 2627 Blast hits to 2054 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 957; Fungi - 640; Plants - 718; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"MA_10436500g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10436538g0010","No alias","Picea abies","(at1g08620 : 878.0) PKDM7D; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), FY-rich, C-terminal (InterPro:IPR003889), FY-rich, N-terminal (InterPro:IPR003888), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C5HC2-type (InterPro:IPR004198), FY-rich, C-terminal subgroup (InterPro:IPR018516), Transcription factor jumonji (InterPro:IPR013129), FY-rich, N-terminal subgroup (InterPro:IPR018518); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G30810.2). & (reliability: 1756.0) &  (original description: no original description)","protein_coding"
"MA_10436593g0010","No alias","Picea abies","(at4g19110 : 412.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (p23111|cdc2_maize : 200.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 824.0) &  (original description: no original description)","protein_coding"
"MA_10437006g0010","No alias","Picea abies","(at3g12590 : 487.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"MA_10437041g0010","No alias","Picea abies","(at1g65910 : 181.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7gcl7|nac74_orysa : 152.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"MA_10437109g0010","No alias","Picea abies","(at5g07980 : 154.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"MA_10437247g0010","No alias","Picea abies","(at4g17140 : 1094.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 2188.0) &  (original description: no original description)","protein_coding"
"MA_10689g0010","No alias","Picea abies","(at5g35210 : 257.0) metalloendopeptidases;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 3951 Blast hits to 3508 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 2460; Fungi - 377; Plants - 809; Viruses - 0; Other Eukaryotes - 305 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"MA_107341g0010","No alias","Picea abies","(at4g29790 : 417.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"MA_108727g0010","No alias","Picea abies","(at2g44430 : 111.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: stem, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48; Bacteria - 2443; Metazoa - 11960; Fungi - 2852; Plants - 1222; Viruses - 306; Other Eukaryotes - 8352 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"MA_110435g0020","No alias","Picea abies","(at1g53090 : 131.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4).  SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain.  SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"MA_112899g0010","No alias","Picea abies","(at2g35140 : 165.0) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.2); Has 307 Blast hits to 293 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (p37707|b2_dauca : 94.7) B2 protein - Daucus carota (Carrot) & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"MA_125713g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_126678g0010","No alias","Picea abies","(at2g02160 : 155.0) CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"MA_130026g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_132688g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_13363g0010","No alias","Picea abies","(at1g79000 : 1475.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No  single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides,  suggesting that HAC1, HAC5, and HAC12 can acetylate any  of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (reliability: 2950.0) &  (original description: no original description)","protein_coding"
"MA_137330g0010","No alias","Picea abies","(at3g62240 : 122.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"MA_14261g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_14714g0010","No alias","Picea abies","(at3g04910 : 546.0) Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.; with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 89.7) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 1092.0) &  (original description: no original description)","protein_coding"
"MA_17503g0010","No alias","Picea abies","(at1g75660 : 553.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"MA_17503g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_177186g0010","No alias","Picea abies","(at3g55160 : 689.0) unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1378.0) &  (original description: no original description)","protein_coding"
"MA_18041g0010","No alias","Picea abies","(at5g42400 : 334.0) Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.; SET domain protein 25 (SDG25); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 5838 Blast hits to 5683 proteins in 501 species: Archae - 3; Bacteria - 461; Metazoa - 2434; Fungi - 507; Plants - 1016; Viruses - 2; Other Eukaryotes - 1415 (source: NCBI BLink). & (q8s4p6|ez1_maize : 100.0) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"MA_18241g0010","No alias","Picea abies","(at1g70060 : 799.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 1544.0) &  (original description: no original description)","protein_coding"
"MA_18260g0010","No alias","Picea abies","(at4g24740 : 559.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p23111|cdc2_maize : 101.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1118.0) &  (original description: no original description)","protein_coding"
"MA_228272g0010","No alias","Picea abies","(at1g27700 : 93.6) Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"MA_231706g0010","No alias","Picea abies","(at4g33300 : 444.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"MA_2332g0020","No alias","Picea abies","(at3g62900 : 234.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"MA_23376g0010","No alias","Picea abies","(at5g17680 : 157.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"MA_2434g0010","No alias","Picea abies","(at5g44180 : 838.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 1676.0) &  (original description: no original description)","protein_coding"
"MA_255786g0010","No alias","Picea abies","(at3g27700 : 386.0) zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3790 Blast hits to 2562 proteins in 343 species: Archae - 8; Bacteria - 521; Metazoa - 625; Fungi - 291; Plants - 164; Viruses - 7; Other Eukaryotes - 2174 (source: NCBI BLink). & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"MA_28235g0010","No alias","Picea abies","(at3g45630 : 238.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"MA_2833g0020","No alias","Picea abies","(at1g32810 : 183.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G10600.1); Has 8965 Blast hits to 5782 proteins in 447 species: Archae - 8; Bacteria - 670; Metazoa - 4118; Fungi - 1126; Plants - 398; Viruses - 78; Other Eukaryotes - 2567 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"MA_302947g0010","No alias","Picea abies","(at3g54540 : 1007.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (reliability: 2014.0) &  (original description: no original description)","protein_coding"
"MA_3312g0010","No alias","Picea abies","(at3g57300 : 1489.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 237.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2978.0) &  (original description: no original description)","protein_coding"
"MA_34612g0010","No alias","Picea abies","(at5g12400 : 84.0) DNA binding;zinc ion binding;DNA binding; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AT hook, DNA-binding motif (InterPro:IPR017956), DDT domain (InterPro:IPR004022), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT5G22760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"MA_35694g0010","No alias","Picea abies","(at5g03730 : 457.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (o24585|cri4_maize : 110.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"MA_39508g0010","No alias","Picea abies","(at2g39340 : 426.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"MA_3965g0010","No alias","Picea abies","(at4g25610 : 191.0) C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); Has 400 Blast hits to 392 proteins in 117 species: Archae - 0; Bacteria - 39; Metazoa - 136; Fungi - 49; Plants - 38; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"MA_407g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_423393g0010","No alias","Picea abies","(at1g53090 : 461.0) Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4).  SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain.  SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.; SPA1-related 4 (SPA4); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1); Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38; Bacteria - 5854; Metazoa - 15099; Fungi - 8579; Plants - 4750; Viruses - 0; Other Eukaryotes - 5147 (source: NCBI BLink). & (p93471|cop1_pea : 307.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"MA_42843g0010","No alias","Picea abies","(at1g02080 : 1165.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 2330.0) &  (original description: no original description)","protein_coding"
"MA_47345g0010","No alias","Picea abies","(at3g52120 : 367.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), D111/G-patch (InterPro:IPR000467); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"MA_52766g0010","No alias","Picea abies","(at1g56460 : 142.0) HIT zinc finger ;PAPA-1-like conserved region; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529), PAPA-1-like conserved region (InterPro:IPR006880); BEST Arabidopsis thaliana protein match is: HIT zinc finger ;PAPA-1-like conserved region (TAIR:AT2G47350.1). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"MA_60759g0010","No alias","Picea abies","(at1g17450 : 440.0) B-block binding subunit of TFIIIC; FUNCTIONS IN: molecular_function unknown; CONTAINS InterPro DOMAIN/s: B-block binding subunit of TFIIIC (InterPro:IPR007309); BEST Arabidopsis thaliana protein match is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1). & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"MA_6100g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_623179g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_64269g0010","No alias","Picea abies","(at3g12810 : 204.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"MA_6626g0010","No alias","Picea abies","(at1g04080 : 605.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (reliability: 1210.0) &  (original description: no original description)","protein_coding"
"MA_6950g0010","No alias","Picea abies","(at3g62240 : 358.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"MA_7069g0010","No alias","Picea abies","(at4g00660 : 734.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 277.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"MA_7388g0020","No alias","Picea abies","(at1g80070 : 4282.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 8564.0) &  (original description: no original description)","protein_coding"
"MA_74105g0010","No alias","Picea abies","(at4g26190 : 181.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"MA_81219g0030","No alias","Picea abies","(at1g20960 : 1029.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2058.0) &  (original description: no original description)","protein_coding"
"MA_87371g0010","No alias","Picea abies","(at1g67580 : 617.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G63370.4); Has 126651 Blast hits to 124962 proteins in 4234 species: Archae - 92; Bacteria - 13816; Metazoa - 47970; Fungi - 13169; Plants - 29930; Viruses - 638; Other Eukaryotes - 21036 (source: NCBI BLink). & (p29618|cdc21_orysa : 274.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"MA_87828g0010","No alias","Picea abies","(at4g32820 : 1133.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 168 Blast hits to 155 proteins in 63 species: Archae - 8; Bacteria - 15; Metazoa - 66; Fungi - 5; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 2266.0) &  (original description: no original description)","protein_coding"
"MA_891272g0010","No alias","Picea abies","(at3g62900 : 143.0) CW-type Zinc Finger; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02990.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"MA_8978g0010","No alias","Picea abies","(at1g79000 : 1375.0) Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No  single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides,  suggesting that HAC1, HAC5, and HAC12 can acetylate any  of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.; histone acetyltransferase of the CBP family 1 (HAC1); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.1). & (reliability: 2750.0) &  (original description: no original description)","protein_coding"
"MA_91092g0010","No alias","Picea abies","(at1g67120 : 686.0) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"MA_93384g0010","No alias","Picea abies","(at4g02480 : 1067.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (p54774|cdc48_soybn : 171.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2134.0) &  (original description: no original description)","protein_coding"
"MA_959962g0010","No alias","Picea abies","(at5g65460 : 314.0) Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1; kinesin like protein for actin based chloroplast movement 2 (KAC2); FUNCTIONS IN: microtubule binding, protein binding, microtubule motor activity; INVOLVED IN: chloroplast avoidance movement, chloroplast accumulation movement; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin like protein for actin based chloroplast movement 1 (TAIR:AT5G10470.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 628.0) &  (original description: no original description)","protein_coding"
"MA_9934452g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"Mp1g01700.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g03340.1","No alias","Marchantia polymorpha","receptor-like protein kinase (RLCK-VI). GTPase interactive protein kinase (RBK/RRK)","protein_coding"
"Mp1g03380.1","No alias","Marchantia polymorpha","Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana (sp|q39008|m3k1_arath : 89.4) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 61.0)","protein_coding"
"Mp1g05400.1","No alias","Marchantia polymorpha","Zinc finger CCCH domain-containing protein 55 OS=Oryza sativa subsp. japonica (sp|q6yyc0|c3h55_orysj : 82.8)","protein_coding"
"Mp1g10310.1","No alias","Marchantia polymorpha","transcription factor (MYB). transcription factor (MYB-related). component CDC5/MAC1 of non-snRNP MOS4-associated complex","protein_coding"
"Mp1g12380.1","No alias","Marchantia polymorpha","protein factor PRPF8/SUS2 of U5 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp1g13040.1","No alias","Marchantia polymorpha","Protein STICHEL-like 3 OS=Arabidopsis thaliana (sp|f4jrp0|stil3_arath : 313.0)","protein_coding"
"Mp1g16040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g17930.1","No alias","Marchantia polymorpha","pre-60S ribosomal subunit assembly factor (SMO4)","protein_coding"
"Mp1g18190.1","No alias","Marchantia polymorpha","ubiquitin ligase component HRD1 of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Mp1g19500.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 344.3) & Flavonoid 3,5-hydroxylase OS=Eustoma exaltatum subsp. russellianum (sp|q96418|c75a5_euser : 290.0)","protein_coding"
"Mp1g26110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26150.1","No alias","Marchantia polymorpha","regulatory component RAPTOR of TORC complex","protein_coding"
"Mp1g26290.1","No alias","Marchantia polymorpha","shuttle protein (RAD23)","protein_coding"
"Mp2g04470.1","No alias","Marchantia polymorpha","Protein MEI2-like 2 OS=Oryza sativa subsp. japonica (sp|q6zi17|oml2_orysj : 616.0)","protein_coding"
"Mp2g05380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g06020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g07950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g10810.1","No alias","Marchantia polymorpha","pre-mRNA splicing factor (SPF45/RBM17)","protein_coding"
"Mp2g13670.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g15880.1","No alias","Marchantia polymorpha","Protein SPIRRIG OS=Arabidopsis thaliana (sp|f4hzb2|bcha1_arath : 3111.0)","protein_coding"
"Mp2g22570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g23140.1","No alias","Marchantia polymorpha","ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana (sp|q0wuc5|alb33_arath : 197.0)","protein_coding"
"Mp2g23750.1","No alias","Marchantia polymorpha","Protein TORNADO 1 OS=Arabidopsis thaliana (sp|q9fj57|trn1_arath : 203.0)","protein_coding"
"Mp3g03480.1","No alias","Marchantia polymorpha","anion transporter (NRT1/PTR)","protein_coding"
"Mp3g13650.1","No alias","Marchantia polymorpha","deubiquitinase (UBP24)","protein_coding"
"Mp3g13910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g16960.1","No alias","Marchantia polymorpha","RopGEF guanine nucleotide exchange factor (SWAP70)","protein_coding"
"Mp3g19940.1","No alias","Marchantia polymorpha","protein kinase (DYRK)","protein_coding"
"Mp3g21160.1","No alias","Marchantia polymorpha","CRWN nuclear lamina lamin-like protein","protein_coding"
"Mp3g22030.1","No alias","Marchantia polymorpha","Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana (sp|q8rxf8|miro1_arath : 774.0)","protein_coding"
"Mp3g23040.1","No alias","Marchantia polymorpha","Eukaryotic translation initiation factor 3 subunit I OS=Arabidopsis thaliana (sp|q38884|eif3i_arath : 115.0)","protein_coding"
"Mp3g23710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g05490.1","No alias","Marchantia polymorpha","subfamily ABCG transporter","protein_coding"
"Mp4g09540.1","No alias","Marchantia polymorpha","helicase component eIF4A3 of RNA quality control Exon Junction complex","protein_coding"
"Mp4g11580.1","No alias","Marchantia polymorpha","component RNPS1 of RNA quality control Exon Junction complex","protein_coding"
"Mp4g21160.1","No alias","Marchantia polymorpha","subunit 2 of Pol II RNA polymerase","protein_coding"
"Mp5g02990.1","No alias","Marchantia polymorpha","catalytic component CDKC of cyclin-dependent kinase complex. catalytic component CDKC-1/CTK1 of polymerase-II kinase complex (CTDK-I). protein kinase (CDKC)","protein_coding"
"Mp5g13470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g14740.1","No alias","Marchantia polymorpha","ribosomal protein arginine N-methyltransferase (PRMT3)","protein_coding"
"Mp5g18790.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g23700.1","No alias","Marchantia polymorpha","folyl-polyglutamate synthetase","protein_coding"
"Mp6g00900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g10920.1","No alias","Marchantia polymorpha","component AUG5 of Augmin gamma-TuRC recruiting complex","protein_coding"
"Mp6g12110.1","No alias","Marchantia polymorpha","eIF2-alpha kinase co-activator (ILITHYIA/GCN1)","protein_coding"
"Mp6g17010.1","No alias","Marchantia polymorpha","component eIF3g of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Mp6g18230.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g20340.1","No alias","Marchantia polymorpha","histone demethylase (PKDM7). transcription factor (JUMONJI)","protein_coding"
"Mp7g11240.1","No alias","Marchantia polymorpha","bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase","protein_coding"
"Mp7g13330.1","No alias","Marchantia polymorpha","component SF3B3 of splicing factor 3B complex","protein_coding"
"Mp7g14510.1","No alias","Marchantia polymorpha","Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana (sp|q9fnr1|rbg3_arath : 81.6)","protein_coding"
"Mp7g15670.1","No alias","Marchantia polymorpha","ATPase component PIE1 of SWR1 chromatin remodeling complex","protein_coding"
"Mp7g16260.1","No alias","Marchantia polymorpha","subfamily ABCG transporter","protein_coding"
"Mp7g17410.1","No alias","Marchantia polymorpha","transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)","protein_coding"
"Mp7g18160.1","No alias","Marchantia polymorpha","no description available(sp|f4is91|rsa1_arath : 184.0)","protein_coding"
"Mp7g19550.1","No alias","Marchantia polymorpha","pre-60S subunit nuclear export factor (NMD3)","protein_coding"
"Mp8g07390.1","No alias","Marchantia polymorpha","transcription factor (BES/BZR). transcription factor (BZR)","protein_coding"
"Mp8g07840.1","No alias","Marchantia polymorpha","mRNA-binding regulatory factor (RBP45/47)","protein_coding"
"Mp8g08610.1","No alias","Marchantia polymorpha","siRNA-integrating factor (AGO)","protein_coding"
"Mp8g09130.1","No alias","Marchantia polymorpha","SART-1 family protein DOT2 OS=Arabidopsis thaliana (sp|q9lfe0|dot2_arath : 364.0)","protein_coding"
"Potri.003G031900","No alias","Populus trichocarpa","Pre-mRNA-processing-splicing factor","protein_coding"
"Pp1s101_8V6","No alias","Physcomitrella patens","F18B13.15; splicing factor, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s104_2V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal","protein_coding"
"Pp1s107_189V6","No alias","Physcomitrella patens","methionyl-trna synthetase","protein_coding"
"Pp1s108_187V6","No alias","Physcomitrella patens","lysyl-trna synthetase","protein_coding"
"Pp1s111_37V6","No alias","Physcomitrella patens","cyclopropane fatty acid synthase","protein_coding"
"Pp1s112_162V6","No alias","Physcomitrella patens","T3G21.17; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s118_176V6","No alias","Physcomitrella patens","ribonucleic acid binding protein","protein_coding"
"Pp1s120_27V6","No alias","Physcomitrella patens","component of oligomeric golgi complex 8","protein_coding"
"Pp1s124_16V6","No alias","Physcomitrella patens","minor histocompatibility antigen","protein_coding"
"Pp1s12_339V6","No alias","Physcomitrella patens","pattern formation","protein_coding"
"Pp1s12_74V6","No alias","Physcomitrella patens","gcn1 general control of amino-acid synthesis 1-like 1","protein_coding"
"Pp1s130_248V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3","protein_coding"
"Pp1s130_291V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s132_172V6","No alias","Physcomitrella patens","nucleoporin 133kda","protein_coding"
"Pp1s135_64V6","No alias","Physcomitrella patens","poly polymerase","protein_coding"
"Pp1s138_131V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s138_180V6","No alias","Physcomitrella patens","histidine kinase","protein_coding"
"Pp1s13_376V6","No alias","Physcomitrella patens","F22O13.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s143_168V6","No alias","Physcomitrella patens","zn- - containing protein","protein_coding"
"Pp1s145_49V6","No alias","Physcomitrella patens","transferring glycosyl","protein_coding"
"Pp1s150_84V6","No alias","Physcomitrella patens","gpi maturation protein","protein_coding"
"Pp1s157_90V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s15_390V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3","protein_coding"
"Pp1s15_90V6","No alias","Physcomitrella patens","histone deacetylase","protein_coding"
"Pp1s160_88V6","No alias","Physcomitrella patens","transferring glycosyl","protein_coding"
"Pp1s162_71V6","No alias","Physcomitrella patens","phosphatidylinositol 4-","protein_coding"
"Pp1s173_134V6","No alias","Physcomitrella patens","argonaute protein group","protein_coding"
"Pp1s173_137V6","No alias","Physcomitrella patens","upl6 (ubiquitin protein ligase 6) ubiquitin-protein ligase","protein_coding"
"Pp1s185_107V6","No alias","Physcomitrella patens","transcription initiation factor","protein_coding"
"Pp1s192_99V6","No alias","Physcomitrella patens","MLE2.5; hydrolase family [Arabidopsis thaliana]","protein_coding"
"Pp1s197_90V6","No alias","Physcomitrella patens","histone transcription regulator","protein_coding"
"Pp1s1_543V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3","protein_coding"
"Pp1s202_94V6","No alias","Physcomitrella patens","F10D13.30; leucine-rich repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s203_55V6","No alias","Physcomitrella patens","uv-damaged dna-binding","protein_coding"
"Pp1s207_33V6","No alias","Physcomitrella patens","importin beta-","protein_coding"
"Pp1s207_51V6","No alias","Physcomitrella patens","thyroid hormone receptor-associated","protein_coding"
"Pp1s20_176V6","No alias","Physcomitrella patens","heat shock protein","protein_coding"
"Pp1s20_331V6","No alias","Physcomitrella patens","xyloglucan 6-","protein_coding"
"Pp1s212_18V6","No alias","Physcomitrella patens","serine threonine-protein phosphatase 4 catalytic subunit","protein_coding"
"Pp1s213_42V6","No alias","Physcomitrella patens","glycine-rich protein","protein_coding"
"Pp1s216_68V6","No alias","Physcomitrella patens","T5I5.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s21_271V6","No alias","Physcomitrella patens","heat repeat family expressed","protein_coding"
"Pp1s224_38V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s229_18V6","No alias","Physcomitrella patens","cop9 complex","protein_coding"
"Pp1s22_239V6","No alias","Physcomitrella patens","MWD22.9; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s22_241V6","No alias","Physcomitrella patens","T2N18.13; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s22_50V6","No alias","Physcomitrella patens","isoform cra_a","protein_coding"
"Pp1s233_94V6","No alias","Physcomitrella patens","rnase l inhibitor-like protein","protein_coding"
"Pp1s234_73V6","No alias","Physcomitrella patens","signal recognition particle 72","protein_coding"
"Pp1s23_342V6","No alias","Physcomitrella patens","enoyl- hydratase isomerase","protein_coding"
"Pp1s245_41V6","No alias","Physcomitrella patens","F11C10.11; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s263_30V6","No alias","Physcomitrella patens","rna binding","protein_coding"
"Pp1s263_4V6","No alias","Physcomitrella patens","o-linkedc transferase","protein_coding"
"Pp1s268_65V6","No alias","Physcomitrella patens","probable ubiquitin ligase tom1p fragment","protein_coding"
"Pp1s26_115V6","No alias","Physcomitrella patens","developmentally regulated gtp binding protein 1","protein_coding"
"Pp1s26_192V6","No alias","Physcomitrella patens","dna-directed rna polymerase iii largest","protein_coding"
"Pp1s26_208V6","No alias","Physcomitrella patens","fyve finger-containing phosphoinositide","protein_coding"
"Pp1s271_27V6","No alias","Physcomitrella patens","T9H9.18; importin beta-2 subunit family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s275_66V6","No alias","Physcomitrella patens","acyl-coenzyme a dehydrogenase member 10","protein_coding"
"Pp1s28_223V6","No alias","Physcomitrella patens","MscS-Like mechanosensitive ion channel MSCL8","protein_coding"
"Pp1s28_354V6","No alias","Physcomitrella patens","atp-binding sub-family f member 2","protein_coding"
"Pp1s28_356V6","No alias","Physcomitrella patens","set domain protein","protein_coding"
"Pp1s307_5V6","No alias","Physcomitrella patens","oligopeptidase b","protein_coding"
"Pp1s311_22V6","No alias","Physcomitrella patens","hla-b associated transcript 1","protein_coding"
"Pp1s311_57V6","No alias","Physcomitrella patens","receptor-like protein kinase","protein_coding"
"Pp1s311_58V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor","protein_coding"
"Pp1s311_73V6","No alias","Physcomitrella patens","F7K24.150; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s335_30V6","No alias","Physcomitrella patens","vacuolar protein sorting","protein_coding"
"Pp1s344_11V6","No alias","Physcomitrella patens","Exocyst complex component 5 (Exocyst complex component Sec10) [Arabidopsis thaliana]","protein_coding"
"Pp1s344_6V6","No alias","Physcomitrella patens","40s ribosomal protein","protein_coding"
"Pp1s344_9V6","No alias","Physcomitrella patens","F25A4.18; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s358_10V6","No alias","Physcomitrella patens","F17A9.18; protein transport protein Sec24, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s367_2V6","No alias","Physcomitrella patens","T5I5.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s38_335V6","No alias","Physcomitrella patens","T22A15.3; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s400_36V6","No alias","Physcomitrella patens","threonyl-trna synthetase","protein_coding"
"Pp1s41_25V6","No alias","Physcomitrella patens","T7I23.15; transcriptional regulator-related [Arabidopsis thaliana]","protein_coding"
"Pp1s42_181V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal","protein_coding"
"Pp1s42_21V6","No alias","Physcomitrella patens","ubiquitin specific peptidase 36","protein_coding"
"Pp1s42_99V6","No alias","Physcomitrella patens","lupus la","protein_coding"
"Pp1s438_24V6","No alias","Physcomitrella patens","pre-mrna processing factor 8","protein_coding"
"Pp1s43_166V6","No alias","Physcomitrella patens","glutaminyl-trna synthetase","protein_coding"
"Pp1s479_13V6","No alias","Physcomitrella patens","mitogen-activated protein kinase 7","protein_coding"
"Pp1s47_214V6","No alias","Physcomitrella patens","2-isopropylmalate synthase b","protein_coding"
"Pp1s495_6V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal","protein_coding"
"Pp1s49_280V6","No alias","Physcomitrella patens","ribonuclease p protein subunit p30 (r protein p30) (rnase p subunit 2)","protein_coding"
"Pp1s52_111V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3","protein_coding"
"Pp1s54_12V6","No alias","Physcomitrella patens","toc34-2 protein","protein_coding"
"Pp1s54_148V6","No alias","Physcomitrella patens","eukaryotic peptide chain release factor gtp-binding","protein_coding"
"Pp1s54_207V6","No alias","Physcomitrella patens","trna-splicing endonuclease subunit sen2-","protein_coding"
"Pp1s54_237V6","No alias","Physcomitrella patens","F18F4.50; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s5_169V6","No alias","Physcomitrella patens","trna modification gtpase","protein_coding"
"Pp1s61_313V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s62_11V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s62_85V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s70_168V6","No alias","Physcomitrella patens","26s proteasome non-atpase regulatory subunit 6","protein_coding"
"Pp1s74_120V6","No alias","Physcomitrella patens","heat1_arath ame: full=uncharacterized protein at3g06530","protein_coding"
"Pp1s74_37V6","No alias","Physcomitrella patens","MSJ1.26; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s78_7V6","No alias","Physcomitrella patens","dnaj domain containing protein","protein_coding"
"Pp1s795_4V6","No alias","Physcomitrella patens","T6K21.1; human Rev interacting-like family protein / hRIP family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s7_251V6","No alias","Physcomitrella patens","nuclear matrix","protein_coding"
"Pp1s80_128V6","No alias","Physcomitrella patens","atp-dependent rna helicase dhh1","protein_coding"
"Pp1s80_129V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s81_43V6","No alias","Physcomitrella patens","mitotic control protein","protein_coding"
"Pp1s83_66V6","No alias","Physcomitrella patens","phytol kinase chloroplast","protein_coding"
"Pp1s84_220V6","No alias","Physcomitrella patens","esp4 (enhanced silencing phenotype 4) binding","protein_coding"
"Pp1s87_152V6","No alias","Physcomitrella patens","aminophospholipid atpase","protein_coding"
"Pp1s87_171V6","No alias","Physcomitrella patens","atp-dependent rna helicase dhh1","protein_coding"
"Pp1s91_147V6","No alias","Physcomitrella patens","atp-dependent helicase","protein_coding"
"Pp1s91_80V6","No alias","Physcomitrella patens","heat shock protein binding","protein_coding"
"Pp1s92_53V6","No alias","Physcomitrella patens","glucosidase ii beta","protein_coding"
"Pp1s99_191V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s9_109V6","No alias","Physcomitrella patens","F28O9.140; eukaryotic translation initiation factor 3E / eIF3e (TIF3E1) [KO:K03250] [Arabidopsis thaliana]","protein_coding"
"Pp1s9_222V6","No alias","Physcomitrella patens","F2J10.3; expressed protein [Arabidopsis thaliana]","protein_coding"
"PSME_00000026-RA","No alias","Pseudotsuga menziesii","(at1g64570 : 305.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"PSME_00000121-RA","No alias","Pseudotsuga menziesii","(at5g16390 : 144.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 140.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00000124-RA","No alias","Pseudotsuga menziesii","(at5g35430 : 434.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 227 Blast hits to 213 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 158; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"PSME_00000206-RA","No alias","Pseudotsuga menziesii","(at1g63490 : 732.0) transcription factor jumonji (jmjC) domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), PLU-1-like (InterPro:IPR013637), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (TAIR:AT1G08620.2); Has 2288 Blast hits to 1952 proteins in 202 species: Archae - 0; Bacteria - 15; Metazoa - 1333; Fungi - 459; Plants - 289; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 1464.0) &  (original description: no original description)","protein_coding"
"PSME_00000580-RA","No alias","Pseudotsuga menziesii","(at3g52140 : 747.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (reliability: 1494.0) &  (original description: no original description)","protein_coding"
"PSME_00000684-RA","No alias","Pseudotsuga menziesii","(at5g11040 : 1385.0) TRS120; CONTAINS InterPro DOMAIN/s: Transport protein Trs120 (InterPro:IPR013935); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2770.0) &  (original description: no original description)","protein_coding"
"PSME_00000870-RA","No alias","Pseudotsuga menziesii","(at1g27750 : 341.0) nucleic acid binding; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 48205 Blast hits to 29216 proteins in 1385 species: Archae - 84; Bacteria - 5862; Metazoa - 21406; Fungi - 6566; Plants - 7294; Viruses - 1352; Other Eukaryotes - 5641 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00000873-RA","No alias","Pseudotsuga menziesii","(at4g35800 : 2661.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (q9mus6|rpoc1_mesvi : 146.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Mesostigma viride & (reliability: 5322.0) &  (original description: no original description)","protein_coding"
"PSME_00001041-RA","No alias","Pseudotsuga menziesii","(at3g02260 : 4229.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 8458.0) &  (original description: no original description)","protein_coding"
"PSME_00001066-RA","No alias","Pseudotsuga menziesii","(at3g23660 : 696.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2). & (reliability: 1392.0) &  (original description: no original description)","protein_coding"
"PSME_00001329-RA","No alias","Pseudotsuga menziesii","(at1g04140 : 358.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G43930.3); Has 24502 Blast hits to 11850 proteins in 489 species: Archae - 64; Bacteria - 6127; Metazoa - 7778; Fungi - 5629; Plants - 2081; Viruses - 0; Other Eukaryotes - 2823 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"PSME_00001703-RA","No alias","Pseudotsuga menziesii","(at4g39420 : 1321.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 2642.0) &  (original description: no original description)","protein_coding"
"PSME_00001724-RA","No alias","Pseudotsuga menziesii","(at1g49340 : 2318.0) Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.; ATPI4K ALPHA; FUNCTIONS IN: 1-phosphatidylinositol 4-kinase activity, inositol or phosphatidylinositol kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: shoot, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphatidylinositol Kinase (InterPro:IPR015433), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51040.1); Has 2472 Blast hits to 2328 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 1180; Fungi - 474; Plants - 245; Viruses - 4; Other Eukaryotes - 569 (source: NCBI BLink). & (p42348|pi3k2_soybn : 149.0) Phosphatidylinositol 3-kinase, nodule isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-1) - Glycine max (Soybean) & (reliability: 4636.0) &  (original description: no original description)","protein_coding"
"PSME_00002215-RA","No alias","Pseudotsuga menziesii","(at2g40060 : 157.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00002512-RA","No alias","Pseudotsuga menziesii","(at5g65930 : 1540.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (p46869|fla10_chlre : 215.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 3080.0) &  (original description: no original description)","protein_coding"
"PSME_00002523-RA","No alias","Pseudotsuga menziesii","(at4g39080 : 1061.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2122.0) &  (original description: no original description)","protein_coding"
"PSME_00002631-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 1949.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 3898.0) &  (original description: no original description)","protein_coding"
"PSME_00003063-RA","No alias","Pseudotsuga menziesii","(at1g65440 : 1434.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (reliability: 2868.0) &  (original description: no original description)","protein_coding"
"PSME_00003288-RA","No alias","Pseudotsuga menziesii","(at1g02080 : 677.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 1354.0) &  (original description: no original description)","protein_coding"
"PSME_00003364-RA","No alias","Pseudotsuga menziesii","(at3g13300 : 623.0) Encodes VCS (VARICOSE).   Involved in mRNA decapping.  VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570).  Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro.  DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies.  Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology.  VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 1246.0) &  (original description: no original description)","protein_coding"
"PSME_00003374-RA","No alias","Pseudotsuga menziesii","(at1g63700 : 226.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway.  Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00003376-RA","No alias","Pseudotsuga menziesii","(at1g63700 : 209.0) Member of MEKK subfamily, a component of the stomatal development regulatory pathway.  Mutations in this locus result in embryo lethality.; YODA (YDA); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: stomatal complex morphogenesis, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 3 (TAIR:AT1G53570.1); Has 133707 Blast hits to 131404 proteins in 4998 species: Archae - 148; Bacteria - 15191; Metazoa - 50613; Fungi - 12908; Plants - 32496; Viruses - 572; Other Eukaryotes - 21779 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00003708-RA","No alias","Pseudotsuga menziesii","(at2g25970 : 332.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (p10388|glt5_wheat : 89.0) Glutenin, high molecular weight subunit DX5 precursor - Triticum aestivum (Wheat) & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00003735-RA","No alias","Pseudotsuga menziesii","(at5g18230 : 453.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"PSME_00003901-RA","No alias","Pseudotsuga menziesii","(at1g27595 : 640.0) CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00004334-RA","No alias","Pseudotsuga menziesii","(at3g18610 : 155.0) Encodes ATNUC-L2 (NUCLEOLIN LIKE 2).; nucleolin like 2 (NUC-L2); FUNCTIONS IN: nucleotide binding, nucleic acid binding; EXPRESSED IN: egg cell, cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 1 (TAIR:AT1G48920.1); Has 220619 Blast hits to 110675 proteins in 3421 species: Archae - 647; Bacteria - 30556; Metazoa - 92066; Fungi - 36057; Plants - 14337; Viruses - 1241; Other Eukaryotes - 45715 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00004431-RA","No alias","Pseudotsuga menziesii","(at1g10490 : 563.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain  of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 1126.0) &  (original description: no original description)","protein_coding"
"PSME_00004511-RA","No alias","Pseudotsuga menziesii","(at5g15270 : 293.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00005859-RA","No alias","Pseudotsuga menziesii","(at5g03280 : 712.0) Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence.; ETHYLENE INSENSITIVE 2 (EIN2); FUNCTIONS IN: transporter activity; INVOLVED IN: in 22 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046), Ethylene-insensitive 2 (InterPro:IPR017187); BEST Arabidopsis thaliana protein match is: natural resistance-associated macrophage protein 1 (TAIR:AT1G80830.1); Has 4402 Blast hits to 4259 proteins in 1453 species: Archae - 50; Bacteria - 3021; Metazoa - 376; Fungi - 278; Plants - 375; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). & (reliability: 1424.0) &  (original description: no original description)","protein_coding"
"PSME_00006163-RA","No alias","Pseudotsuga menziesii","(at4g02480 : 1157.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (q96372|cdc48_capan : 175.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 2314.0) &  (original description: no original description)","protein_coding"
"PSME_00006284-RA","No alias","Pseudotsuga menziesii","(at1g55860 : 3174.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 6348.0) &  (original description: no original description)","protein_coding"
"PSME_00006396-RA","No alias","Pseudotsuga menziesii","(at4g32850 : 795.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1590.0) &  (original description: no original description)","protein_coding"
"PSME_00006567-RA","No alias","Pseudotsuga menziesii","(at5g44800 : 1157.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 357.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2314.0) &  (original description: no original description)","protein_coding"
"PSME_00006953-RA","No alias","Pseudotsuga menziesii","(at5g54440 : 919.0) Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.; CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 1838.0) &  (original description: no original description)","protein_coding"
"PSME_00007346-RA","No alias","Pseudotsuga menziesii","(at4g21710 : 1979.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (q9mus5|rpob_mesvi : 180.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (reliability: 3958.0) &  (original description: no original description)","protein_coding"
"PSME_00008125-RA","No alias","Pseudotsuga menziesii","(at4g11420 : 927.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (q40554|if3a_tobac : 914.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1854.0) &  (original description: no original description)","protein_coding"
"PSME_00008232-RA","No alias","Pseudotsuga menziesii","(at5g02310 : 269.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"PSME_00008848-RA","No alias","Pseudotsuga menziesii","(at3g11540 : 1151.0) Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling.  Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress.; SPINDLY (SPY); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o82039|spy_pethy : 1150.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (reliability: 2302.0) &  (original description: no original description)","protein_coding"
"PSME_00009246-RA","No alias","Pseudotsuga menziesii","(at5g63840 : 1271.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04931|aglu_betvu : 303.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Beta vulgaris (Sugar beet) & (reliability: 2542.0) &  (original description: no original description)","protein_coding"
"PSME_00009407-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010075-RA","No alias","Pseudotsuga menziesii","(at2g38020 : 1137.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 2274.0) &  (original description: no original description)","protein_coding"
"PSME_00010258-RA","No alias","Pseudotsuga menziesii","(at3g07100 : 1033.0) Encodes SEC24a/ERMO2.  Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (reliability: 2066.0) &  (original description: no original description)","protein_coding"
"PSME_00010969-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010984-RA","No alias","Pseudotsuga menziesii","(at3g13300 : 912.0) Encodes VCS (VARICOSE).   Involved in mRNA decapping.  VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570).  Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro.  DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies.  Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology.  VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 1824.0) &  (original description: no original description)","protein_coding"
"PSME_00011005-RA","No alias","Pseudotsuga menziesii","(at2g31660 : 1342.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling.  Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport.  Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity.  SAD2 was ubiquitously expressed at low levels in all tissues except flowers.  SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress,  increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 2684.0) &  (original description: no original description)","protein_coding"
"PSME_00011614-RA","No alias","Pseudotsuga menziesii","(at1g72390 : 268.0) CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00012052-RA","No alias","Pseudotsuga menziesii","(at2g46020 : 1579.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 345.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3158.0) &  (original description: no original description)","protein_coding"
"PSME_00012209-RA","No alias","Pseudotsuga menziesii","(at1g80070 : 3342.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 6684.0) &  (original description: no original description)","protein_coding"
"PSME_00012232-RA","No alias","Pseudotsuga menziesii","(at2g07360 : 1285.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 2570.0) &  (original description: no original description)","protein_coding"
"PSME_00012360-RA","No alias","Pseudotsuga menziesii","(at5g55390 : 786.0) Encodes EDM2 (enhanced downy mildew 2).  The predicted protein bears typical features of transcriptional regulators.  EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region.  Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif.  Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1).  EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 1572.0) &  (original description: no original description)","protein_coding"
"PSME_00012407-RA","No alias","Pseudotsuga menziesii","(at1g20980 : 525.0) Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture.; squamosa promoter binding protein-like 14 (SPL14); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to bacterium, regulation of transcription; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (TAIR:AT1G76580.1); Has 1851 Blast hits to 1143 proteins in 117 species: Archae - 0; Bacteria - 38; Metazoa - 215; Fungi - 101; Plants - 958; Viruses - 0; Other Eukaryotes - 539 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"PSME_00013828-RA","No alias","Pseudotsuga menziesii","(at4g11380 : 1413.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 2826.0) &  (original description: no original description)","protein_coding"
"PSME_00014407-RA","No alias","Pseudotsuga menziesii","(q60ex6|bsl1_orysa : 556.0) Serine/threonine protein phosphatase BSL1 homolog (EC 3.1.3.16) (BSU1-like protein 1 homolog) - Oryza sativa (Rice) & (at4g03080 : 547.0) BRI1 suppressor 1 (BSU1)-like 1 (BSL1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Serine/threonine protein phosphatase family protein (TAIR:AT1G03445.1); Has 11450 Blast hits to 9180 proteins in 548 species: Archae - 80; Bacteria - 322; Metazoa - 3883; Fungi - 1977; Plants - 2720; Viruses - 6; Other Eukaryotes - 2462 (source: NCBI BLink). & (reliability: 1094.0) &  (original description: no original description)","protein_coding"
"PSME_00014893-RA","No alias","Pseudotsuga menziesii","(at5g58410 : 1026.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2052.0) &  (original description: no original description)","protein_coding"
"PSME_00015153-RA","No alias","Pseudotsuga menziesii","(at1g26240 : 169.0) Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT4G08370.1); Has 364257 Blast hits to 37887 proteins in 1520 species: Archae - 1099; Bacteria - 63371; Metazoa - 128573; Fungi - 46566; Plants - 64812; Viruses - 9875; Other Eukaryotes - 49961 (source: NCBI BLink). & (p06599|extn_dauca : 100.0) Extensin precursor - Daucus carota (Carrot) & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00015245-RA","No alias","Pseudotsuga menziesii","(at4g30700 : 341.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 41014 Blast hits to 14356 proteins in 276 species: Archae - 0; Bacteria - 8; Metazoa - 149; Fungi - 107; Plants - 40176; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00015730-RA","No alias","Pseudotsuga menziesii","(at1g32230 : 169.0) Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family.  Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants.  Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.; WWE protein-protein interaction domain protein family; CONTAINS InterPro DOMAIN/s: WWE domain (InterPro:IPR004170), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 1 (TAIR:AT2G35510.1); Has 178 Blast hits to 176 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00016394-RA","No alias","Pseudotsuga menziesii","(at3g26560 : 1512.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 3024.0) &  (original description: no original description)","protein_coding"
"PSME_00016470-RA","No alias","Pseudotsuga menziesii","(at1g55620 : 602.0) Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen.; chloride channel F (CLC-F); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: Golgi apparatus, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.1); Has 8626 Blast hits to 8538 proteins in 2008 species: Archae - 276; Bacteria - 6042; Metazoa - 796; Fungi - 384; Plants - 229; Viruses - 0; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"PSME_00016558-RA","No alias","Pseudotsuga menziesii","(at5g44240 : 1418.0) aminophospholipid ATPase 2 (ALA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: aminophospholipid ATPase 1 (TAIR:AT5G04930.1). & (q65x71|aca6_orysa : 88.6) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 2836.0) &  (original description: no original description)","protein_coding"
"PSME_00016707-RA","No alias","Pseudotsuga menziesii","(p31251|ube12_wheat : 1493.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 1473.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 2946.0) &  (original description: no original description)","protein_coding"
"PSME_00016988-RA","No alias","Pseudotsuga menziesii","(at3g11910 : 130.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00017815-RA","No alias","Pseudotsuga menziesii","(at1g61690 : 261.0) phosphoinositide binding; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G20110.1); Has 11870 Blast hits to 9510 proteins in 652 species: Archae - 53; Bacteria - 741; Metazoa - 6145; Fungi - 1417; Plants - 821; Viruses - 12; Other Eukaryotes - 2681 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00018260-RA","No alias","Pseudotsuga menziesii","(at1g77250 : 134.0) RING/FYVE/PHD-type zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 9 (TAIR:AT3G01460.1); Has 5001 Blast hits to 3477 proteins in 217 species: Archae - 2; Bacteria - 0; Metazoa - 3203; Fungi - 426; Plants - 950; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00018507-RA","No alias","Pseudotsuga menziesii","(at1g61140 : 805.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 90.5) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1610.0) &  (original description: no original description)","protein_coding"
"PSME_00018891-RA","No alias","Pseudotsuga menziesii","(at5g44180 : 906.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 1812.0) &  (original description: no original description)","protein_coding"
"PSME_00018920-RA","No alias","Pseudotsuga menziesii","(at5g65750 : 301.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"PSME_00020533-RA","No alias","Pseudotsuga menziesii","(at4g15475 : 587.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"PSME_00021195-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 1459.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 2918.0) &  (original description: no original description)","protein_coding"
"PSME_00022323-RA","No alias","Pseudotsuga menziesii","(at1g31780 : 798.0) CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 1596.0) &  (original description: no original description)","protein_coding"
"PSME_00022740-RA","No alias","Pseudotsuga menziesii","(at4g19210 : 1092.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2184.0) &  (original description: no original description)","protein_coding"
"PSME_00022884-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 2563.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 5126.0) &  (original description: no original description)","protein_coding"
"PSME_00022964-RA","No alias","Pseudotsuga menziesii","(at2g27210 : 870.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 862.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1708.0) &  (original description: no original description)","protein_coding"
"PSME_00023936-RA","No alias","Pseudotsuga menziesii","(at2g27100 : 640.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development  such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00024193-RA","No alias","Pseudotsuga menziesii","(at1g62020 : 1949.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 3898.0) &  (original description: no original description)","protein_coding"
"PSME_00024428-RA","No alias","Pseudotsuga menziesii","(at1g55860 : 1240.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 2480.0) &  (original description: no original description)","protein_coding"
"PSME_00024678-RA","No alias","Pseudotsuga menziesii","(at4g29790 : 534.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1068.0) &  (original description: no original description)","protein_coding"
"PSME_00025944-RA","No alias","Pseudotsuga menziesii","(at4g31160 : 1191.0) Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.; DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink). & (reliability: 2382.0) &  (original description: no original description)","protein_coding"
"PSME_00026293-RA","No alias","Pseudotsuga menziesii","(at1g17070 : 821.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (reliability: 1642.0) &  (original description: no original description)","protein_coding"
"PSME_00026848-RA","No alias","Pseudotsuga menziesii","(at3g26850 : 99.8) histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"PSME_00027950-RA","No alias","Pseudotsuga menziesii","(q42942|pyr5_tobac : 587.0) Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRTase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54470 : 576.0) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis; uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); FUNCTIONS IN: orotate phosphoribosyltransferase activity, orotidine-5'-phosphate decarboxylase activity; INVOLVED IN: response to cadmium ion, cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Orotidine 5'-phosphate decarboxylase, subfamily 1, core (InterPro:IPR014732), Orotidine 5'-phosphate decarboxylase, active site (InterPro:IPR018089), Ribulose-phosphate binding barrel (InterPro:IPR011060), Phosphoribosyltransferase (InterPro:IPR000836), Orotate phosphoribosyl transferase (InterPro:IPR004467), Orotidine 5'-phosphate decarboxylase, core (InterPro:IPR001754); Has 9174 Blast hits to 9124 proteins in 2964 species: Archae - 386; Bacteria - 5538; Metazoa - 208; Fungi - 955; Plants - 89; Viruses - 3; Other Eukaryotes - 1995 (source: NCBI BLink). & (reliability: 1152.0) &  (original description: no original description)","protein_coding"
"PSME_00028035-RA","No alias","Pseudotsuga menziesii","(at1g20760 : 553.0) Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G21630.1); Has 12017 Blast hits to 4944 proteins in 443 species: Archae - 20; Bacteria - 3590; Metazoa - 3650; Fungi - 1736; Plants - 412; Viruses - 16; Other Eukaryotes - 2593 (source: NCBI BLink). & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"PSME_00029184-RA","No alias","Pseudotsuga menziesii","(at5g39840 : 882.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1764.0) &  (original description: no original description)","protein_coding"
"PSME_00030246-RA","No alias","Pseudotsuga menziesii","(at2g38770 : 1825.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 3650.0) &  (original description: no original description)","protein_coding"
"PSME_00031204-RA","No alias","Pseudotsuga menziesii","(at3g55160 : 662.0) unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1324.0) &  (original description: no original description)","protein_coding"
"PSME_00031685-RA","No alias","Pseudotsuga menziesii","(at3g60860 : 2385.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 4770.0) &  (original description: no original description)","protein_coding"
"PSME_00031820-RA","No alias","Pseudotsuga menziesii","(at1g80260 : 133.0) embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00031865-RA","No alias","Pseudotsuga menziesii","(at3g60860 : 551.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 1102.0) &  (original description: no original description)","protein_coding"
"PSME_00034438-RA","No alias","Pseudotsuga menziesii","(at1g13980 : 2105.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 4210.0) &  (original description: no original description)","protein_coding"
"PSME_00034449-RA","No alias","Pseudotsuga menziesii","(at4g17330 : 360.0) gene of unknown function expressed in seedlings, flower buds and stems; G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00034583-RA","No alias","Pseudotsuga menziesii","(at4g02400 : 169.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"PSME_00037711-RA","No alias","Pseudotsuga menziesii","(at3g09670 : 154.0) Tudor/PWWP/MBT superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G02950.1); Has 880 Blast hits to 796 proteins in 129 species: Archae - 0; Bacteria - 16; Metazoa - 486; Fungi - 43; Plants - 152; Viruses - 0; Other Eukaryotes - 183 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00037927-RA","No alias","Pseudotsuga menziesii","(at3g21480 : 166.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00039652-RA","No alias","Pseudotsuga menziesii","(at4g12610 : 124.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00040473-RA","No alias","Pseudotsuga menziesii","(at4g00905 : 171.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00041582-RA","No alias","Pseudotsuga menziesii","(at1g43690 : 580.0) ubiquitin interaction motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin interacting motif (InterPro:IPR003903); Has 368 Blast hits to 347 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 1160.0) &  (original description: no original description)","protein_coding"
"PSME_00041811-RA","No alias","Pseudotsuga menziesii","(at2g27210 : 573.0) BRI1 suppressor 1 (BSU1)-like 3 (BSL3); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, iron ion binding, phosphoprotein phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 2 (TAIR:AT1G08420.2). & (q2qm47|bsl2_orysa : 568.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"PSME_00042002-RA","No alias","Pseudotsuga menziesii","(at3g01560 : 145.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein of unknown function DUF1421 (InterPro:IPR010820), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT5G14540.1); Has 90069 Blast hits to 50370 proteins in 2078 species: Archae - 118; Bacteria - 11979; Metazoa - 33430; Fungi - 17845; Plants - 12302; Viruses - 1904; Other Eukaryotes - 12491 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00046136-RA","No alias","Pseudotsuga menziesii","(at1g15990 : 435.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 7 (CNGC7); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to cadmium ion; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel  8 (TAIR:AT1G19780.1); Has 3586 Blast hits to 3408 proteins in 277 species: Archae - 0; Bacteria - 66; Metazoa - 1555; Fungi - 86; Plants - 1001; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (reliability: 870.0) &  (original description: no original description)","protein_coding"
"PSME_00055986-RA","No alias","Pseudotsuga menziesii","(at4g11450 : 163.0) Protein of unknown function (DUF3527); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT1G63520.1); Has 132 Blast hits to 129 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"PSME_00057199-RA","No alias","Pseudotsuga menziesii","(at3g49500 : 925.0) Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.; RNA-dependent RNA polymerase 6 (RDR6); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 633 Blast hits to 609 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 284; Plants - 204; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 1850.0) &  (original description: no original description)","protein_coding"
"Seita.1G031800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G100800.1","No alias","Setaria italica ","kinase co-activator component *(ATRIP) of ATR-ATRIP DNA damage sensor complex","protein_coding"
"Seita.1G210700.1","No alias","Setaria italica ","phosphoethanolamine transferase-I *(PIG-N)","protein_coding"
"Seita.1G258700.1","No alias","Setaria italica ","component *(APC8) of (APC/C)-dependent ubiquitination arc lamp subcomplex","protein_coding"
"Seita.1G280300.1","No alias","Setaria italica ","SMARCD component *(SWP73) of chromatin remodeling complex","protein_coding"
"Seita.1G296900.1","No alias","Setaria italica ","regulatory protein *(FRIENDLY) of mitochondrion division","protein_coding"
"Seita.1G300800.1","No alias","Setaria italica ","scaffold component *(VCS) of mRNA decapping complex","protein_coding"
"Seita.1G332500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G361100.1","No alias","Setaria italica ","component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling complex","protein_coding"
"Seita.1G377500.1","No alias","Setaria italica ","M3-class (Thimet) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.1G378400.1","No alias","Setaria italica ","component *(CTNNBL1) of MAC spliceosome-associated complex","protein_coding"
"Seita.2G134900.1","No alias","Setaria italica ","component *(CPSF100/Ydh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Seita.2G155900.1","No alias","Setaria italica ","nuclear-encoded organellar RNA polymerase *(NEP)","protein_coding"
"Seita.2G321800.1","No alias","Setaria italica ","FRS/FRF-type transcription factor","protein_coding"
"Seita.2G378600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G387400.1","No alias","Setaria italica ","tRNA export karyopherin *(XPOT) & nucleocytoplasmic export karyopherin *(XPO3/XPOT)","protein_coding"
"Seita.2G402000.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G420600.1","No alias","Setaria italica ","deubiquitinase *(UBP24)","protein_coding"
"Seita.2G433700.1","No alias","Setaria italica ","chromatin remodeling factor *(SHPRH)","protein_coding"
"Seita.2G440100.1","No alias","Setaria italica ","EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Seita.3G146400.1","No alias","Setaria italica ","regulatory cofactor *(RIPR) of exosome complex","protein_coding"
"Seita.3G222000.1","No alias","Setaria italica ","ribosome docking factor *(MDM38)","protein_coding"
"Seita.3G228300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G240400.1","No alias","Setaria italica ","component *(CRN/MAC10) of non-snRNP MOS4-associated complex","protein_coding"
"Seita.3G281100.1","No alias","Setaria italica ","auxiliary component *(NAA25) of NatB N-terminal acetylase complex","protein_coding"
"Seita.3G323100.1","No alias","Setaria italica ","regulatory protein *(CYCT) of cell cycle & regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex","protein_coding"
"Seita.3G370400.1","No alias","Setaria italica ","component *(CTU2) of CTU1-CTU2 tRNA thiouridylase complex","protein_coding"
"Seita.3G376600.1","No alias","Setaria italica ","regulatory protein *(FLK) of autonomous floral-promotion pathway","protein_coding"
"Seita.4G011700.1","No alias","Setaria italica ","regulatory EIN2-stabilizing factor *(MHZ3)","protein_coding"
"Seita.4G051800.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G060000.1","No alias","Setaria italica ","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Seita.4G238800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G286200.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase & starch branching enzyme","protein_coding"
"Seita.5G016200.1","No alias","Setaria italica ","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G055300.1","No alias","Setaria italica ","exoribonuclease *(RAT1/XRN2)","protein_coding"
"Seita.5G129000.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase","protein_coding"
"Seita.5G133800.1","No alias","Setaria italica ","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"Seita.5G164900.1","No alias","Setaria italica ","nucleocytoplasmic transport karyopherin *(XPO5) & miRNA nuclear export factor (HASTY) of RNA-induced silencing complex (RISC) export","protein_coding"
"Seita.5G186600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G243700.1","No alias","Setaria italica ","component *(SF3A1) of splicing factor 3A complex","protein_coding"
"Seita.5G256800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G289900.1","No alias","Setaria italica ","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G332000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G379000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G387300.1","No alias","Setaria italica ","nucleoporin of nuclear pore complex *(NUP62)","protein_coding"
"Seita.6G032000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G089900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G112700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G129300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G131800.1","No alias","Setaria italica ","RNA editing factor *(DYW7)","protein_coding"
"Seita.6G194600.1","No alias","Setaria italica ","component *(ELP2) of ELONGATOR transcription elongation complex","protein_coding"
"Seita.7G013100.1","No alias","Setaria italica ","group-III RNA polymerase-II phosphatase & subcluster B phosphatase","protein_coding"
"Seita.7G056400.1","No alias","Setaria italica ","meiotic double strand break initiation accessory protein *(PRD1/MEI1)","protein_coding"
"Seita.7G142500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G160500.1","No alias","Setaria italica ","regulatory protein of microtubule orientation *(CLASP) & microtubule orientation regulator *(CLASP)","protein_coding"
"Seita.7G232000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G258200.1","No alias","Setaria italica ","component *(NRPE2) of RNA polymerase V complex & component *(NRPD2) of RNA polymerase IV complex","protein_coding"
"Seita.8G102800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G157900.1","No alias","Setaria italica ","component *(RFC1) of PCNA sliding clamp loader complex","protein_coding"
"Seita.8G239700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G007100.1","No alias","Setaria italica ","nuclease CPSF73-I & component *(CPSF73/Ysh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Seita.9G048500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G092900.1","No alias","Setaria italica ","methylation reader *(ECT)","protein_coding"
"Seita.9G122500.1","No alias","Setaria italica ","component *(DRB7) of DRB4-DRB7.1 siRNA biogenesis regulator complex","protein_coding"
"Seita.9G158800.1","No alias","Setaria italica ","HD-ZIP III-type transcription factor","protein_coding"
"Seita.9G215900.1","No alias","Setaria italica ","pre-mRNA-processing protein *(PRP40C)","protein_coding"
"Seita.9G263000.1","No alias","Setaria italica ","component *(GCN5/ADA4) of SAGA transcription co-activator complex","protein_coding"
"Seita.9G278100.1","No alias","Setaria italica ","miRNA uridylyltransferase *(URT1)","protein_coding"
"Seita.9G310300.1","No alias","Setaria italica ","vacuolar protein sorting co-chaperone *(GRV2)","protein_coding"
"Seita.9G341200.1","No alias","Setaria italica ","monosaccharide transporter *(AZT)","protein_coding"
"Seita.9G367300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G381200.1","No alias","Setaria italica ","component *(MAC7)  of MAC spliceosome-associated complex","protein_coding"
"Seita.9G523200.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex","protein_coding"
"Seita.9G555800.1","No alias","Setaria italica ","component *(SF3B3) of splicing factor 3B complex","protein_coding"
"Seita.9G556400.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase & callose synthase","protein_coding"
"Sobic.001G015500.1","No alias","Sorghum bicolor ","component *(ALB3) of thylakoid membrane SRP insertion system","protein_coding"
"Sobic.001G061800.1","No alias","Sorghum bicolor ","component *(RFC3) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.001G110600.1","No alias","Sorghum bicolor ","kinase co-activator (ILITHYIA/GCN1) involved in eIF2 complex activation","protein_coding"
"Sobic.001G120500.1","No alias","Sorghum bicolor ","component *(Toc64-III) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G196700.1","No alias","Sorghum bicolor ","S28-class carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.001G199000.1","No alias","Sorghum bicolor ","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding"
"Sobic.001G226000.1","No alias","Sorghum bicolor ","component *(MAC3) of MAC spliceosome-associated complex & E3 ubiquitin protein ligase *(PUB60)","protein_coding"
"Sobic.001G252500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G370300.1","No alias","Sorghum bicolor ","component *(PRPF4) of spliceosomal U4/U6 snRNP","protein_coding"
"Sobic.001G373000.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP93)","protein_coding"
"Sobic.001G373800.1","No alias","Sorghum bicolor ","component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex","protein_coding"
"Sobic.001G396000.1","No alias","Sorghum bicolor ","S9-class plastidial glutamyl peptidase *(CGEP)","protein_coding"
"Sobic.001G453600.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase & beta-N-acetylhexosaminidase *(HEXO)","protein_coding"
"Sobic.001G455800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase","protein_coding"
"Sobic.001G462600.2","No alias","Sorghum bicolor ","component *(RBL/SWD1) of COMPASS histone trimethylation complex","protein_coding"
"Sobic.001G532100.1","No alias","Sorghum bicolor ","component *(CSN1) of COP9 signalosome complex","protein_coding"
"Sobic.002G043000.1","No alias","Sorghum bicolor ","miRNA/siRNA methyltransferase *(HEN1)","protein_coding"
"Sobic.002G051600.1","No alias","Sorghum bicolor ","assembly factor MMS19 of cytosolic CIA system transfer phase","protein_coding"
"Sobic.002G079100.2","No alias","Sorghum bicolor ","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.002G152900.1","No alias","Sorghum bicolor ","component *(TOP6B) of somatic DNA topoisomerase VI complex","protein_coding"
"Sobic.002G192200.1","No alias","Sorghum bicolor ","component *(PCID2/Thp1) of TREX-2 mRNP trafficking complex","protein_coding"
"Sobic.002G301200.1","No alias","Sorghum bicolor ","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.002G315800.3","No alias","Sorghum bicolor ","C1-class subclass CTB cysteine protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.002G317200.1","No alias","Sorghum bicolor ","tRNA wybutosine biosynthesis enzyme *(TYW2/TYW3)","protein_coding"
"Sobic.002G318600.1","No alias","Sorghum bicolor ","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding"
"Sobic.003G001400.1","No alias","Sorghum bicolor ","component *(NSE5) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.003G015400.1","No alias","Sorghum bicolor ","component *(uS6m) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.003G030500.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Sobic.003G042400.1","No alias","Sorghum bicolor ","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Sobic.003G046300.1","No alias","Sorghum bicolor ","deubiquitinase component *(GID6/UBP14) of GID ubiquitination complex","protein_coding"
"Sobic.003G074200.1","No alias","Sorghum bicolor ","component *(ARP5) of INO80 chromatin remodeling complex","protein_coding"
"Sobic.003G092800.1","No alias","Sorghum bicolor ","subfamily ABCG transporter","protein_coding"
"Sobic.003G158300.3","No alias","Sorghum bicolor ","multifunctional enzyme *(MFP)","protein_coding"
"Sobic.003G259600.1","No alias","Sorghum bicolor ","component *(ORC4) of origin recognition complex","protein_coding"
"Sobic.003G274400.1","No alias","Sorghum bicolor ","component *(CAF1c/MSI) of CAF1 histone chaperone complex & flowering time factor *(FVE)","protein_coding"
"Sobic.003G287100.1","No alias","Sorghum bicolor ","component *(TAH18) of cytosolic CIA system assembly phase","protein_coding"
"Sobic.003G310900.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP12-13) & deubiquitinase *(UBP12-13)","protein_coding"
"Sobic.003G368200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G025800.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G027500.1","No alias","Sorghum bicolor ","helicase component *(RVB) of chromatin remodeling complex & helicase component *(RVB)","protein_coding"
"Sobic.004G038100.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Sobic.004G075700.2","No alias","Sorghum bicolor ","component *(MBD9) of SWR1 chromatin remodeling complex","protein_coding"
"Sobic.004G085000.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP205)","protein_coding"
"Sobic.004G111000.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.004G193300.1","No alias","Sorghum bicolor ","phosphoethanolamine transferase-I *(PIG-N)","protein_coding"
"Sobic.004G315500.1","No alias","Sorghum bicolor ","component *(RFC5) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.004G352600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G028600.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase component *(LTN1) of Ribosome-associated Quality Control (RQC) complex","protein_coding"
"Sobic.005G045200.1","No alias","Sorghum bicolor ","BEL-type transcription factor","protein_coding"
"Sobic.005G058900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G059200.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G143300.1","No alias","Sorghum bicolor ","histone chaperone *(CHZ)","protein_coding"
"Sobic.005G163100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G047900.1","No alias","Sorghum bicolor ","dynamin-like protein *(DRP3)","protein_coding"
"Sobic.006G049600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G058800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & glycine-tRNA ligase","protein_coding"
"Sobic.006G059500.1","No alias","Sorghum bicolor ","scaffold factor *(COILIN) of Cajal body formation","protein_coding"
"Sobic.006G083300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G112700.3","No alias","Sorghum bicolor ","associated component *(POT) of telomerase ribonucleoprotein complex","protein_coding"
"Sobic.006G137600.1","No alias","Sorghum bicolor ","cohesin cofactor *(PDS5)","protein_coding"
"Sobic.006G140600.1","No alias","Sorghum bicolor ","regulatory protein of microtubule orientation *(CLASP) & microtubule orientation regulator *(CLASP)","protein_coding"
"Sobic.006G153900.1","No alias","Sorghum bicolor ","organic anion transporter *(OATP)","protein_coding"
"Sobic.006G231800.2","No alias","Sorghum bicolor ","component *(MRE11) of MRE11-RAD50-NBS1 (MRN) complex & component *(MRE11) of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Sobic.006G266700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G011600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G014800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G054800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & valine-tRNA ligase","protein_coding"
"Sobic.007G068100.1","No alias","Sorghum bicolor ","aconitase *(ACO) & aconitase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.007G071900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G077900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G089800.1","No alias","Sorghum bicolor ","SETD-type lysine N-methyltransferase","protein_coding"
"Sobic.007G106700.1","No alias","Sorghum bicolor ","NSUN-group-IV rRNA methyltransferase","protein_coding"
"Sobic.007G193900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G017200.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(ALADIN)","protein_coding"
"Sobic.008G037800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G051200.1","No alias","Sorghum bicolor ","co-chaperone (GFA2) involved in gametogenesis & co-chaperone *(Hsp40)","protein_coding"
"Sobic.008G056900.1","No alias","Sorghum bicolor ","component *(RFC4) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.008G156300.1","No alias","Sorghum bicolor ","pyridoxal kinase *(SNO1/SOS4) & pyridoxal kinase *(SOS4/SNO1) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.008G171700.1","No alias","Sorghum bicolor ","component *(ORC3) of origin recognition complex","protein_coding"
"Sobic.009G096100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G131100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G141400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G167100.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.009G213200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G214200.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.009G227700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G053600.3","No alias","Sorghum bicolor ","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Sobic.010G097500.1","No alias","Sorghum bicolor ","DNA polymerase lambda *(POLL)","protein_coding"
"Sobic.010G114900.1","No alias","Sorghum bicolor ","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"Sobic.010G265300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g080100","No alias","Solanum lycopersicum","LOW QUALITY:RING zinc finger protein, putative (AHRD V3.3 *** A0A072USX7_MEDTR)","protein_coding"
"Solyc01g094810","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme E2 (AHRD V3.3 *** A0A1D1ZAB9_9ARAE)","protein_coding"
"Solyc01g111130","No alias","Solanum lycopersicum","bHLH transcription factor 011","protein_coding"
"Solyc02g070400","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** A0A0V0IVQ1_SOLCH)","protein_coding"
"Solyc02g077850","No alias","Solanum lycopersicum","Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A0K9NYE0_ZOSMR)","protein_coding"
"Solyc02g089260","No alias","Solanum lycopersicum","Auxin transport protein BIG (AHRD V3.3 *-* W9RHS2_9ROSA)","protein_coding"
"Solyc02g093830","No alias","Solanum lycopersicum","Glucose-6-phosphate 1-dehydrogenase (AHRD V3.3 *** K4BDH9_SOLLC)","protein_coding"
"Solyc03g043960","No alias","Solanum lycopersicum","ADP-ribosylation factor, putative (AHRD V3.3 *** B9T2F5_RICCO)","protein_coding"
"Solyc03g082480","No alias","Solanum lycopersicum","GRF1-interacting factor-like protein (AHRD V3.3 *-* A0A072TYG4_MEDTR)","protein_coding"
"Solyc03g082680","No alias","Solanum lycopersicum","Neuroblastoma-amplified protein (AHRD V3.3 *** B2Z6N3_NICBE)","protein_coding"
"Solyc03g097180","No alias","Solanum lycopersicum","Plasma membrane isoform 2 (AHRD V3.3 *** A0A061F6L3_THECC)","protein_coding"
"Solyc03g114670","No alias","Solanum lycopersicum","40S ribosomal protein S13 (AHRD V3.3 --* RS13_PEA)","protein_coding"
"Solyc03g115150","No alias","Solanum lycopersicum","histone deacetylase 5 (AHRD V3.3 *** AT5G61060.1)","protein_coding"
"Solyc03g115590","No alias","Solanum lycopersicum","T-box transcription factor, putative (DUF863) (AHRD V3.3 *-* AT1G26620.1)","protein_coding"
"Solyc03g118750","No alias","Solanum lycopersicum","phosphoethanolamine N-methyltransferase","protein_coding"
"Solyc04g080120","No alias","Solanum lycopersicum","Pentatricopeptide repeat protein (AHRD V3.3 *** A0A1B3IPW0_CAPAN)","protein_coding"
"Solyc04g082670","No alias","Solanum lycopersicum","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (AHRD V3.3 *** K4BVZ4_SOLLC)","protein_coding"
"Solyc05g006240","No alias","Solanum lycopersicum","Chaperone DnaJ domain protein (AHRD V3.3 *** G7K481_MEDTR)","protein_coding"
"Solyc05g015040","No alias","Solanum lycopersicum","RNA helicase DEAH-box 15","protein_coding"
"Solyc05g054170","No alias","Solanum lycopersicum","GRAS family transcription factor (AHRD V3.3 *** G7JLR5_MEDTR)","protein_coding"
"Solyc05g054240","No alias","Solanum lycopersicum","Protein arginine n-methyltransferase, putative (AHRD V3.3 *** B9RT51_RICCO)","protein_coding"
"Solyc06g005490","No alias","Solanum lycopersicum","triosephosphate isomerase (AHRD V3.3 *** AT3G55440.1)","protein_coding"
"Solyc06g050230","No alias","Solanum lycopersicum","Dual specificity protein phosphatase, putative (AHRD V3.3 *** B9S4C7_RICCO)","protein_coding"
"Solyc06g065620","No alias","Solanum lycopersicum","probable protein phosphatase 2C","protein_coding"
"Solyc07g005180","No alias","Solanum lycopersicum","ubiquitin-associated protein (DUF1068) (AHRD V3.3 *** AT2G24290.1)","protein_coding"
"Solyc07g008880","No alias","Solanum lycopersicum","Pre-mRNA-processing-splicing factor 8 (AHRD V3.3 *** W9R414_9ROSA)","protein_coding"
"Solyc07g064110","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SA19_RICCO)","protein_coding"
"Solyc08g005800","No alias","Solanum lycopersicum","Pectinacetylesterase family protein (AHRD V3.3 *** G7L754_MEDTR)","protein_coding"
"Solyc08g066070","No alias","Solanum lycopersicum","leucine zipper Z12127","protein_coding"
"Solyc08g066950","No alias","Solanum lycopersicum","1-deoxy-D-xylulose-5-phosphate synthase (AHRD V3.3 *** A0A161ZT20_DAUCA)","protein_coding"
"Solyc08g077470","No alias","Solanum lycopersicum","Reticulon family protein (AHRD V3.3 *** AT1G78895.1)","protein_coding"
"Solyc08g081340","No alias","Solanum lycopersicum","DNA repair helicase XPB1-like protein (AHRD V3.3 *** AT5G41370.1)","protein_coding"
"Solyc09g009370","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding-like protein (AHRD V3.3 *** A0A072V2R4_MEDTR)","protein_coding"
"Solyc09g042260","No alias","Solanum lycopersicum","Protein kinase atsik, putative (AHRD V3.3 *** B9SRS3_RICCO)","protein_coding"
"Solyc09g059620","No alias","Solanum lycopersicum","Sterile alpha motif domain-containing protein (AHRD V3.3 *-* A0A118K250_CYNCS)","protein_coding"
"Solyc09g063020","No alias","Solanum lycopersicum","Integral membrane HRF1 family protein (AHRD V3.3 *** AT1G30890.2)","protein_coding"
"Solyc09g065350","No alias","Solanum lycopersicum","LOW QUALITY:ovate family protein 18","protein_coding"
"Solyc09g082050","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 (AHRD V3.3 *** SUVH1_TOBAC)","protein_coding"
"Solyc09g097880","No alias","Solanum lycopersicum","DNA topoisomerase (AHRD V3.3 *** K4CWW0_SOLLC)","protein_coding"
"Solyc10g005920","No alias","Solanum lycopersicum","Enhancer of mRNA-decapping protein 4 (AHRD V3.3 *-* A0A0B2S7S2_GLYSO)","protein_coding"
"Solyc10g006930","No alias","Solanum lycopersicum","Leucine-rich repeat (LRR) family protein (AHRD V3.3 *** AT3G15410.1)","protein_coding"
"Solyc10g008060","No alias","Solanum lycopersicum","diiron containing four-helix bundle family ferritin protein, putative (Protein of unknown function DUF455) (AHRD V3.3 *** AT1G06240.1)","protein_coding"
"Solyc10g055650","No alias","Solanum lycopersicum","Protein phosphatase 2c, putative (AHRD V3.3 *** B9S5K3_RICCO)","protein_coding"
"Solyc10g078750","No alias","Solanum lycopersicum","Zinc finger transcription factor 59","protein_coding"
"Solyc10g084760","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** W9SG42_9ROSA)","protein_coding"
"Solyc10g085600","No alias","Solanum lycopersicum","BTB/POZ domain-containing protein FBL11 (AHRD V3.3 *** A0A0B2QG81_GLYSO)","protein_coding"
"Solyc11g006320","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)","protein_coding"
"Solyc11g008770","No alias","Solanum lycopersicum","LETM1 and EF-hand domain-containing protein 1 (AHRD V3.3 *** A0A061EI71_THECC)","protein_coding"
"Solyc11g010550","No alias","Solanum lycopersicum","GPI ethanolamine phosphate transferase (AHRD V3.3 *** G7JXN2_MEDTR)","protein_coding"
"Solyc11g020750","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g066300","No alias","Solanum lycopersicum","CRS2-associated factor 1 (AHRD V3.3 *** A0A072TTL7_MEDTR)","protein_coding"
"Solyc11g069710","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** A0A097P9Q7_HEVBR)","protein_coding"
"Solyc12g044370","No alias","Solanum lycopersicum","Zinc phosphodiesterase ELAC protein 2 (AHRD V3.3 *** A0A0B2RKZ7_GLYSO)","protein_coding"
"Solyc12g095760","No alias","Solanum lycopersicum","Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha (AHRD V3.3 *** K4DH49_SOLLC)","protein_coding"
"Sopen07g004810","No alias","Solanum pennellii","PROCN (NUC071) domain","protein_coding"