"sequence_id","alias","species","description","type"
"A4A49_08674","No alias","Nicotiana attenuata","transcription initiation factor iif subunit alpha","protein_coding"
"A4A49_12944","No alias","Nicotiana attenuata","transcription initiation factor iif subunit alpha","protein_coding"
"AC194457.3_FG001","No alias","Zea mays","inositol transporter 4","protein_coding"
"AC204891.4_FG001","No alias","Zea mays","Function unknown","protein_coding"
"AC216182.3_FG004","No alias","Zea mays","Function unknown","protein_coding"
"At4g12610","No alias","Arabidopsis thaliana","Transcription initiation factor IIF subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q9SU25]","protein_coding"
"Bradi1g01560","No alias","Brachypodium distachyon","26S proteasome regulatory subunit, putative (RPN5)","protein_coding"
"Bradi1g02380","No alias","Brachypodium distachyon","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"Bradi1g03800","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi1g04330","No alias","Brachypodium distachyon","MIRO-related GTP-ase 1","protein_coding"
"Bradi1g05950","No alias","Brachypodium distachyon","Protein kinase family protein","protein_coding"
"Bradi1g06387","No alias","Brachypodium distachyon","cullin4","protein_coding"
"Bradi1g06470","No alias","Brachypodium distachyon","LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein","protein_coding"
"Bradi1g07620","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g15070","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi1g15920","No alias","Brachypodium distachyon","MSCS-like 2","protein_coding"
"Bradi1g16210","No alias","Brachypodium distachyon","SPFH/Band 7/PHB domain-containing membrane-associated protein family","protein_coding"
"Bradi1g22566","No alias","Brachypodium distachyon","myosin heavy chain-related","protein_coding"
"Bradi1g24260","No alias","Brachypodium distachyon","HVA22-like protein K","protein_coding"
"Bradi1g24850","No alias","Brachypodium distachyon","PapD-like superfamily protein","protein_coding"
"Bradi1g26590","No alias","Brachypodium distachyon","SH3 domain-containing protein","protein_coding"
"Bradi1g29435","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi1g31380","No alias","Brachypodium distachyon","homogentisate phytyltransferase 1","protein_coding"
"Bradi1g33290","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Bradi1g33770","No alias","Brachypodium distachyon","Plant calmodulin-binding protein-related","protein_coding"
"Bradi1g34130","No alias","Brachypodium distachyon","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Bradi1g36320","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding"
"Bradi1g36830","No alias","Brachypodium distachyon","regulatory particle triple-A ATPase 6A","protein_coding"
"Bradi1g47590","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g49230","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g52090","No alias","Brachypodium distachyon","Cwf15 / Cwc15 cell cycle control family protein","protein_coding"
"Bradi1g53630","No alias","Brachypodium distachyon","Subtilase family protein","protein_coding"
"Bradi1g57450","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi1g58180","No alias","Brachypodium distachyon","pre-mRNA processing ribonucleoprotein binding region-containing protein","protein_coding"
"Bradi1g67090","No alias","Brachypodium distachyon","cytosolic enolase","protein_coding"
"Bradi1g67450","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Bradi1g67936","No alias","Brachypodium distachyon","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Bradi1g70460","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi1g77630","No alias","Brachypodium distachyon","Integral membrane protein hemolysin-III homolog","protein_coding"
"Bradi2g00156","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g03820","No alias","Brachypodium distachyon","FKBP12 interacting protein 37","protein_coding"
"Bradi2g05990","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi2g09120","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding"
"Bradi2g10780","No alias","Brachypodium distachyon","proteasome family protein","protein_coding"
"Bradi2g10816","No alias","Brachypodium distachyon","Leucine-rich repeat (LRR) family protein","protein_coding"
"Bradi2g13196","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g13450","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi2g13690","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g13710","No alias","Brachypodium distachyon","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Bradi2g19430","No alias","Brachypodium distachyon","ATP-dependent protease La (LON) domain protein","protein_coding"
"Bradi2g23820","No alias","Brachypodium distachyon","G10 family protein","protein_coding"
"Bradi2g28040","No alias","Brachypodium distachyon","Drought-responsive family protein","protein_coding"
"Bradi2g31070","No alias","Brachypodium distachyon","saposin B domain-containing protein","protein_coding"
"Bradi2g33180","No alias","Brachypodium distachyon","membrane bound O-acyl transferase (MBOAT) family protein","protein_coding"
"Bradi2g35167","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g35570","No alias","Brachypodium distachyon","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Bradi2g39860","No alias","Brachypodium distachyon","formin homology 1","protein_coding"
"Bradi2g40820","No alias","Brachypodium distachyon","ubiquitin-specific protease 6","protein_coding"
"Bradi2g41400","No alias","Brachypodium distachyon","3\'-5\' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein","protein_coding"
"Bradi2g41780","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi2g42160","No alias","Brachypodium distachyon","Family of unknown function (DUF572)","protein_coding"
"Bradi2g42240","No alias","Brachypodium distachyon","telomere repeat binding factor 1","protein_coding"
"Bradi2g43910","No alias","Brachypodium distachyon","calcium-dependent protein kinase 6","protein_coding"
"Bradi2g44450","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding"
"Bradi2g55760","No alias","Brachypodium distachyon","sorting nexin 1","protein_coding"
"Bradi2g56587","No alias","Brachypodium distachyon","ubiquitin family protein","protein_coding"
"Bradi2g57777","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding"
"Bradi3g02890","No alias","Brachypodium distachyon","copper ion binding;cobalt ion binding;zinc ion binding","protein_coding"
"Bradi3g08110","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF641)","protein_coding"
"Bradi3g12820","No alias","Brachypodium distachyon","putative type 1 membrane protein","protein_coding"
"Bradi3g16350","No alias","Brachypodium distachyon","Tho complex subunit 7/Mft1p","protein_coding"
"Bradi3g16475","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g18175","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g22660","No alias","Brachypodium distachyon","acyl-CoA oxidase 3","protein_coding"
"Bradi3g22750","No alias","Brachypodium distachyon","compromised recognition of TCV 1","protein_coding"
"Bradi3g22897","No alias","Brachypodium distachyon","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Bradi3g24730","No alias","Brachypodium distachyon","gamma subunit of Mt ATP synthase","protein_coding"
"Bradi3g30640","No alias","Brachypodium distachyon","Serine carboxypeptidase S28 family protein","protein_coding"
"Bradi3g31480","No alias","Brachypodium distachyon","shaggy-like protein kinase 32","protein_coding"
"Bradi3g37110","No alias","Brachypodium distachyon","GDA1/CD39 nucleoside phosphatase family protein","protein_coding"
"Bradi3g37216","No alias","Brachypodium distachyon","PEP1 receptor 2","protein_coding"
"Bradi3g43900","No alias","Brachypodium distachyon","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding"
"Bradi3g47466","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi3g51340","No alias","Brachypodium distachyon","Protein of unknown function (DUF788)","protein_coding"
"Bradi3g51990","No alias","Brachypodium distachyon","Nucleotide-diphospho-sugar transferase family protein","protein_coding"
"Bradi3g52240","No alias","Brachypodium distachyon","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Bradi3g54490","No alias","Brachypodium distachyon","regulatory particle triple-A ATPase 5A","protein_coding"
"Bradi3g55614","No alias","Brachypodium distachyon","type one serine/threonine protein phosphatase 4","protein_coding"
"Bradi4g03690","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi4g07000","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi4g07420","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19650","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi4g28010","No alias","Brachypodium distachyon","RUB1 conjugating enzyme 1","protein_coding"
"Bradi4g37260","No alias","Brachypodium distachyon","RAD3-like DNA-binding helicase protein","protein_coding"
"Bradi4g38660","No alias","Brachypodium distachyon","cleavage and polyadenylation specificity factor 100","protein_coding"
"Bradi4g41288","No alias","Brachypodium distachyon","protein tyrosine phosphatase 1","protein_coding"
"Bradi4g43990","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g00616","No alias","Brachypodium distachyon","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Bradi5g03761","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g12000","No alias","Brachypodium distachyon","ubiquitin-specific protease 4","protein_coding"
"Bradi5g12790","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g18970","No alias","Brachypodium distachyon","zinc finger protein-related","protein_coding"
"Bradi5g20390","No alias","Brachypodium distachyon","Tudor/PWWP/MBT superfamily protein","protein_coding"
"Bradi5g21937","No alias","Brachypodium distachyon","gamma-soluble NSF attachment protein","protein_coding"
"Bradi5g24610","No alias","Brachypodium distachyon","Galactose mutarotase-like superfamily protein","protein_coding"
"Brara.A01121.1","No alias","Brassica rapa","calcium sensor *(CML)","protein_coding"
"Brara.A01386.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding"
"Brara.B01417.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01841.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03023.1","No alias","Brassica rapa","Qbc-type SNAP25-group component of SNARE membrane fusion complex","protein_coding"
"Brara.B03406.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01670.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02704.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02712.1","No alias","Brassica rapa","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Brara.E01554.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03482.1","No alias","Brassica rapa","fucosyl transferase (ESMD) involved in pectin-dependent cell adhesion","protein_coding"
"Brara.G00341.1","No alias","Brassica rapa","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding"
"Brara.G01039.1","No alias","Brassica rapa","clade F phosphatase","protein_coding"
"Brara.H00564.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02253.1","No alias","Brassica rapa","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Brara.I03863.1","No alias","Brassica rapa","solute transporter *(AAAP)","protein_coding"
"Brara.I03988.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I04171.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00320.1","No alias","Brassica rapa","clathrin assembly protein *(AP180)","protein_coding"
"Brara.J01373.1","No alias","Brassica rapa","REM-type transcription factor","protein_coding"
"Brara.J02592.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00860.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00939.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01721.1","No alias","Brassica rapa","P4-type ATPase component *(ALA) of phospholipid flippase complex & active component *(ALA) of ALA-ALIS flippase complex & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Glyma.01G023500","No alias","Glycine max","K-box region and MADS-box transcription factor family protein","protein_coding"
"Glyma.01G094200","No alias","Glycine max","eukaryotic translation initiation factor 4G","protein_coding"
"Glyma.01G096300","No alias","Glycine max","ARF-GAP domain 8","protein_coding"
"Glyma.01G159900","No alias","Glycine max","Golgi-localized GRIP domain-containing protein","protein_coding"
"Glyma.01G162200","No alias","Glycine max","RNA polymerase II large subunit","protein_coding"
"Glyma.01G166400","No alias","Glycine max","Phosphatidylinositol 3- and 4-kinase family protein with FAT domain","protein_coding"
"Glyma.01G226700","No alias","Glycine max","ALBINA 1","protein_coding"
"Glyma.02G094400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G119000","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.02G216000","No alias","Glycine max","ubiquitin-protein ligase 1","protein_coding"
"Glyma.02G219200","No alias","Glycine max","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Glyma.02G271900","No alias","Glycine max","Structural maintenance of chromosomes (SMC) family protein","protein_coding"
"Glyma.02G276900","No alias","Glycine max","4-phosphopantetheine adenylyltransferase","protein_coding"
"Glyma.02G295200","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.03G051300","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.03G076800","No alias","Glycine max","mRNA capping enzyme family protein","protein_coding"
"Glyma.03G107700","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.03G121000","No alias","Glycine max","global transcription factor group B1","protein_coding"
"Glyma.03G127500","No alias","Glycine max","microtubule-associated proteins 70-1","protein_coding"
"Glyma.03G142600","No alias","Glycine max","Tubulin binding cofactor C domain-containing protein","protein_coding"
"Glyma.03G147000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G171000","No alias","Glycine max","HSP20-like chaperones superfamily protein","protein_coding"
"Glyma.03G172200","No alias","Glycine max","eukaryotic translation initiation factor 3A","protein_coding"
"Glyma.03G219500","No alias","Glycine max","Prolyl oligopeptidase family protein","protein_coding"
"Glyma.03G250400","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"Glyma.03G257800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G013900","No alias","Glycine max","Phosphatidylinositol 3- and 4-kinase family protein","protein_coding"
"Glyma.04G194500","No alias","Glycine max","cyclopropyl isomerase","protein_coding"
"Glyma.04G236700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G240900","No alias","Glycine max","global transcription factor group A2","protein_coding"
"Glyma.05G039400","No alias","Glycine max","modifier of snc1","protein_coding"
"Glyma.05G096000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G109300","No alias","Glycine max","little nuclei4","protein_coding"
"Glyma.05G112600","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.05G131500","No alias","Glycine max","chromatin remodeling 4","protein_coding"
"Glyma.05G152900","No alias","Glycine max","RNA recognition motif (RRM)-containing protein","protein_coding"
"Glyma.05G166100","No alias","Glycine max","nuclear factor Y, subunit A7","protein_coding"
"Glyma.05G191200","No alias","Glycine max","phosphatidylinositol 4-OH kinase beta1","protein_coding"
"Glyma.06G008300","No alias","Glycine max","nucleic acid binding;zinc ion binding;DNA binding","protein_coding"
"Glyma.06G045200","No alias","Glycine max","TBP-associated factor 4","protein_coding"
"Glyma.06G074700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G086000","No alias","Glycine max","Protein of unknown function (DUF810)","protein_coding"
"Glyma.06G098700","No alias","Glycine max","ubiquitin-protein ligase 1","protein_coding"
"Glyma.06G122500","No alias","Glycine max","global transcription factor group A2","protein_coding"
"Glyma.06G127600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G156500","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Glyma.06G171000","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.06G187500","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.06G224300","No alias","Glycine max","methyl-CPG-binding domain 10","protein_coding"
"Glyma.06G288900","No alias","Glycine max","Homeodomain-like transcriptional regulator","protein_coding"
"Glyma.07G012000","No alias","Glycine max","Protein phosphatase 2A, regulatory subunit PR55","protein_coding"
"Glyma.07G045100","No alias","Glycine max","ARID/BRIGHT DNA-binding domain-containing protein","protein_coding"
"Glyma.07G054500","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.07G099400","No alias","Glycine max","poly(A) polymerase 1","protein_coding"
"Glyma.07G119000","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.07G201200","No alias","Glycine max","homeobox-1","protein_coding"
"Glyma.07G207300","No alias","Glycine max","IQ-domain 13","protein_coding"
"Glyma.07G223700","No alias","Glycine max","Cyclin family protein","protein_coding"
"Glyma.07G233100","No alias","Glycine max","calcium-dependent lipid-binding family protein","protein_coding"
"Glyma.07G234500","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.07G252100","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G046200","No alias","Glycine max","microtubule-associated proteins 70-2","protein_coding"
"Glyma.08G087600","No alias","Glycine max","ubiquitin-protein ligase 1","protein_coding"
"Glyma.08G162300","No alias","Glycine max","nuclear pore anchor","protein_coding"
"Glyma.08G340500","No alias","Glycine max","eukaryotic translation initiation factor 4G","protein_coding"
"Glyma.09G009900","No alias","Glycine max","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Glyma.09G016800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.09G046500","No alias","Glycine max","cullin 1","protein_coding"
"Glyma.09G082000","No alias","Glycine max","squamosa promoter-binding protein-like 12","protein_coding"
"Glyma.09G135100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.09G262000","No alias","Glycine max","K+ efflux antiporter 2","protein_coding"
"Glyma.10G149900","No alias","Glycine max","PRP38 family protein","protein_coding"
"Glyma.10G175300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G250500","No alias","Glycine max","Homeotic gene regulator","protein_coding"
"Glyma.10G251100","No alias","Glycine max","PCF11P-similar protein 4","protein_coding"
"Glyma.10G266600","No alias","Glycine max","Endosomal targeting BRO1-like domain-containing protein","protein_coding"
"Glyma.11G016000","No alias","Glycine max","ALBINA 1","protein_coding"
"Glyma.11G091200","No alias","Glycine max","phosphatidylinositol synthase 1","protein_coding"
"Glyma.11G145600","No alias","Glycine max","SIT4 phosphatase-associated family protein","protein_coding"
"Glyma.11G157400","No alias","Glycine max","protein kinases;ubiquitin-protein ligases","protein_coding"
"Glyma.11G160300","No alias","Glycine max","Insulinase (Peptidase family M16) family protein","protein_coding"
"Glyma.11G166100","No alias","Glycine max","ubiquitin-activating enzyme 1","protein_coding"
"Glyma.12G180600","No alias","Glycine max","Adaptor protein complex AP-2, alpha subunit","protein_coding"
"Glyma.12G189500","No alias","Glycine max","BRI1 suppressor 1 (BSU1)-like 2","protein_coding"
"Glyma.13G149200","No alias","Glycine max","ser/arg-rich protein kinase 4","protein_coding"
"Glyma.13G159100","No alias","Glycine max","RabGAP/TBC domain-containing protein","protein_coding"
"Glyma.13G161600","No alias","Glycine max","sucrose phosphate synthase 1F","protein_coding"
"Glyma.13G235300","No alias","Glycine max","homeobox-1","protein_coding"
"Glyma.13G276500","No alias","Glycine max","proton pump interactor 1","protein_coding"
"Glyma.13G305000","No alias","Glycine max","SET domain protein 2","protein_coding"
"Glyma.13G321000","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.13G367300","No alias","Glycine max","TOPLESS-related 1","protein_coding"
"Glyma.14G032700","No alias","Glycine max","auxin response factor 6","protein_coding"
"Glyma.14G112700","No alias","Glycine max","SET domain group 29","protein_coding"
"Glyma.14G180600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G001400","No alias","Glycine max","O-fucosyltransferase family protein","protein_coding"
"Glyma.15G114200","No alias","Glycine max","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Glyma.15G120300","No alias","Glycine max","binding","protein_coding"
"Glyma.15G122400","No alias","Glycine max","varicose-related","protein_coding"
"Glyma.15G133700","No alias","Glycine max","Glycosyl hydrolases family 31  protein","protein_coding"
"Glyma.15G172100","No alias","Glycine max","DNA-directed RNA polymerase family protein","protein_coding"
"Glyma.15G265300","No alias","Glycine max","nuclear pore anchor","protein_coding"
"Glyma.16G006800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G035100","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.16G076500","No alias","Glycine max","Adaptin family protein","protein_coding"
"Glyma.16G077800","No alias","Glycine max","NADP-malic enzyme 4","protein_coding"
"Glyma.16G093800","No alias","Glycine max","Helicase/SANT-associated, DNA binding protein","protein_coding"
"Glyma.17G085700","No alias","Glycine max","histone deacetylase 6","protein_coding"
"Glyma.17G089200","No alias","Glycine max","pantothenate kinase 2","protein_coding"
"Glyma.17G117600","No alias","Glycine max","RNA polymerase II transcription mediators","protein_coding"
"Glyma.17G120500","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.17G157900","No alias","Glycine max","little nuclei4","protein_coding"
"Glyma.17G175000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G204000","No alias","Glycine max","embryo defective 2410","protein_coding"
"Glyma.17G259200","No alias","Glycine max","VPS35 homolog B","protein_coding"
"Glyma.18G002400","No alias","Glycine max","DNA repair-recombination protein (RAD50)","protein_coding"
"Glyma.18G058200","No alias","Glycine max","TBP-associated factor 15B","protein_coding"
"Glyma.18G079400","No alias","Glycine max","agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein","protein_coding"
"Glyma.18G143900","No alias","Glycine max","cyclin-related","protein_coding"
"Glyma.18G169600","No alias","Glycine max","Helicase/SANT-associated, DNA binding protein","protein_coding"
"Glyma.18G225800","No alias","Glycine max","Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein","protein_coding"
"Glyma.18G234700","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.19G051900","No alias","Glycine max","ribosomal protein L2","protein_coding"
"Glyma.19G125600","No alias","Glycine max","global transcription factor group B1","protein_coding"
"Glyma.19G149800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G223200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G231900","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.19G261200","No alias","Glycine max","dicer-like 1","protein_coding"
"Glyma.20G023500","No alias","Glycine max","Cyclin family protein","protein_coding"
"Glyma.20G028100","No alias","Glycine max","GC-rich sequence DNA-binding factor-like protein","protein_coding"
"Glyma.20G050700","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Glyma.20G107100","No alias","Glycine max","Splicing factor, CC1-like","protein_coding"
"GRMZM2G000601","No alias","Zea mays","ubiquitin-conjugating enzyme 28","protein_coding"
"GRMZM2G001247","No alias","Zea mays","Pollen Ole e 1 allergen and extensin family protein","protein_coding"
"GRMZM2G009876","No alias","Zea mays","Ribosomal protein S8e family protein","protein_coding"
"GRMZM2G012209","No alias","Zea mays","nucleotide-sensitive chloride conductance regulator (ICln) family protein","protein_coding"
"GRMZM2G014180","No alias","Zea mays","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"GRMZM2G016671","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G017804","No alias","Zea mays","Trypsin family protein with PDZ domain","protein_coding"
"GRMZM2G017869","No alias","Zea mays","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"GRMZM2G020761","No alias","Zea mays","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"GRMZM2G029001","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G037048","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G038001","No alias","Zea mays","SHV3-like 5","protein_coding"
"GRMZM2G041275","No alias","Zea mays","ATP synthase alpha/beta family protein","protein_coding"
"GRMZM2G043414","No alias","Zea mays","Diacylglycerol kinase family protein","protein_coding"
"GRMZM2G052581","No alias","Zea mays","Spo11/DNA topoisomerase VI, subunit A protein","protein_coding"
"GRMZM2G077673","No alias","Zea mays","beta-ureidopropionase","protein_coding"
"GRMZM2G082222","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G084513","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G089876","No alias","Zea mays","HIT-type Zinc finger family protein","protein_coding"
"GRMZM2G093858","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G099454","No alias","Zea mays","basic chitinase","protein_coding"
"GRMZM2G099487","No alias","Zea mays","eukaryotic translation initiation factor-related","protein_coding"
"GRMZM2G132804","No alias","Zea mays","proteasome family protein","protein_coding"
"GRMZM2G132929","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"GRMZM2G145085","No alias","Zea mays","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"GRMZM2G149756","No alias","Zea mays","Integrase-type DNA-binding superfamily protein","protein_coding"
"GRMZM2G156246","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G157310","No alias","Zea mays","5\'-nucleotidases;magnesium ion binding","protein_coding"
"GRMZM2G160458","No alias","Zea mays","Ribosomal RNA processing Brix domain protein","protein_coding"
"GRMZM2G161295","No alias","Zea mays","NAD(P)H dehydrogenase 18","protein_coding"
"GRMZM2G173878","No alias","Zea mays","RAB GTPase homolog B1C","protein_coding"
"GRMZM2G174738","No alias","Zea mays","Mitochondrial substrate carrier family protein","protein_coding"
"GRMZM2G178919","No alias","Zea mays","MAK10 homologue","protein_coding"
"GRMZM2G320152","No alias","Zea mays","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"GRMZM2G326195","No alias","Zea mays","acyl-CoA binding protein 4","protein_coding"
"GRMZM2G351259","No alias","Zea mays","cytochrome P450, family 83, subfamily B, polypeptide 1","protein_coding"
"GRMZM2G354851","No alias","Zea mays","GTP-binding protein Obg/CgtA","protein_coding"
"GRMZM2G406108","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding"
"GRMZM2G419694","No alias","Zea mays","Ubiquitin-like superfamily protein","protein_coding"
"GRMZM2G444621","No alias","Zea mays","calmodulin-like 11","protein_coding"
"GRMZM2G545891","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G702991","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM5G802392","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G820188","No alias","Zea mays","thioredoxin family protein","protein_coding"
"GRMZM5G853479","No alias","Zea mays","indole-3-acetic acid inducible 30","protein_coding"
"GRMZM5G859195","No alias","Zea mays","4-(cytidine 5\'-phospho)-2-C-methyl-D-erithritol kinase","protein_coding"
"HORVU0Hr1G001440.2","No alias","Hordeum vulgare","hexokinase","protein_coding"
"HORVU0Hr1G004200.2","No alias","Hordeum vulgare","ribosome biogenesis factor *(RsgA)","protein_coding"
"HORVU1Hr1G029480.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G034630.9","No alias","Hordeum vulgare","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"HORVU1Hr1G055480.1","No alias","Hordeum vulgare","regulatory protein *(PEP) of autonomous floral-promotion pathway","protein_coding"
"HORVU1Hr1G072640.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G080290.6","No alias","Hordeum vulgare","regulatory phosphatase component *(ABI1/ABI2) of cytoplasm-localized abscisic acid receptor complex & clade A phosphatase","protein_coding"
"HORVU2Hr1G032370.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G035780.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G084590.1","No alias","Hordeum vulgare","regulatory protein *(NPQ6) of non-photochemical quenching","protein_coding"
"HORVU2Hr1G099440.54","No alias","Hordeum vulgare","ent-kaurene synthase & EC_4.2 carbon-oxygen lyase","protein_coding"
"HORVU2Hr1G104950.3","No alias","Hordeum vulgare","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"HORVU3Hr1G034630.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G049360.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G116080.2","No alias","Hordeum vulgare","component *(uS17m) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU4Hr1G009090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G019590.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G024460.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G062770.8","No alias","Hordeum vulgare","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"HORVU4Hr1G082020.28","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G037020.1","No alias","Hordeum vulgare","component *(RFC4) of PCNA sliding clamp loader complex","protein_coding"
"HORVU5Hr1G042160.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G058430.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G099490.2","No alias","Hordeum vulgare","component *(PIG-Q) of GPI N-acetylglucosamine transferase complex","protein_coding"
"HORVU5Hr1G124410.12","No alias","Hordeum vulgare","regulatory subunit betagamma of SnRK1 kinase complex & regulatory subunit betagamma of SNF1-related SnRK1 kinase complex","protein_coding"
"HORVU5Hr1G125110.14","No alias","Hordeum vulgare","basal Sigma-type transcription factor","protein_coding"
"HORVU6Hr1G006050.1","No alias","Hordeum vulgare","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"HORVU7Hr1G046270.10","No alias","Hordeum vulgare","reticulophagy cargo receptor *(C53)","protein_coding"
"HORVU7Hr1G056420.2","No alias","Hordeum vulgare","methionyl aminopeptidase *(MAP2)","protein_coding"
"HORVU7Hr1G082900.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G085790.31","No alias","Hordeum vulgare","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G087550.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G090780.4","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G100750.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00004_0450","kfl00004_0450_v1.1","Klebsormidium nitens","(at4g36090 : 252.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"Kfl00023_0280","kfl00023_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0420","kfl00024_0420_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00026_0200","kfl00026_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00029_0340","kfl00029_0340_v1.1","Klebsormidium nitens","(at1g58025 : 91.7) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"Kfl00032_0200","kfl00032_0200_v1.1","Klebsormidium nitens","(at5g25070 : 84.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"Kfl00035_0130","kfl00035_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00048_0470","kfl00048_0470_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00050_0270","kfl00050_0270_v1.1","Klebsormidium nitens","(at1g03910 : 575.0) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (reliability: 1150.0) &  (original description: no original description)","protein_coding"
"Kfl00058_0210","kfl00058_0210_v1.1","Klebsormidium nitens","(at4g18260 : 157.0) Cytochrome b561/ferric reductase transmembrane protein family; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane protein family (TAIR:AT2G30890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0310","kfl00060_0310_v1.1","Klebsormidium nitens","(p37707|b2_dauca : 119.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 109.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0120","kfl00061_0120_v1.1","Klebsormidium nitens","(at1g65660 : 655.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1310.0) &  (original description: no original description)","protein_coding"
"Kfl00076_0020","kfl00076_0020_v1.1","Klebsormidium nitens","(at2g26460 : 348.0) Encodes SMU2, a protein involved in RNA splicing.; SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA splicing; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RED-like, N-terminal (InterPro:IPR012916), RED-like, C-terminal (InterPro:IPR012492); Has 470 Blast hits to 361 proteins in 150 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 94; Plants - 62; Viruses - 3; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"Kfl00096_0110","kfl00096_0110_v1.1","Klebsormidium nitens","(q7eyv7|parp1_orysa : 838.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) & (at2g31320 : 836.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 1672.0) &  (original description: no original description)","protein_coding"
"Kfl00101_0290","kfl00101_0290_v1.1","Klebsormidium nitens","(at3g13060 : 203.0) evolutionarily conserved C-terminal region 5 (ECT5); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 2 (TAIR:AT3G13460.4); Has 1288 Blast hits to 1234 proteins in 189 species: Archae - 0; Bacteria - 12; Metazoa - 605; Fungi - 140; Plants - 385; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00110_0090","kfl00110_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00126_0180","kfl00126_0180_v1.1","Klebsormidium nitens","(at5g61150 : 184.0) Encodes highly hydrophilic protein involved in positively regulating FLC expression.  Mutants are early flowering and show a loss of FLC expression in the absence of cold.; VERNALIZATION INDEPENDENCE 4 (VIP4); INVOLVED IN: negative regulation of flower development, vernalization response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leo1-like protein (InterPro:IPR007149); Has 69096 Blast hits to 31991 proteins in 1682 species: Archae - 184; Bacteria - 8816; Metazoa - 27909; Fungi - 8257; Plants - 3470; Viruses - 882; Other Eukaryotes - 19578 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00135_0180","kfl00135_0180_v1.1","Klebsormidium nitens","(at1g11060 : 93.6) WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"Kfl00142_0030","kfl00142_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00160_0210","kfl00160_0210_v1.1","Klebsormidium nitens","(at5g19300 : 265.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00173_0140","kfl00173_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00184_0080","kfl00184_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00185_0260","kfl00185_0260_v1.1","Klebsormidium nitens","(at5g64930 : 82.8) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).; CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"Kfl00193_0120","kfl00193_0120_v1.1","Klebsormidium nitens","(at1g78280 : 466.0) transferases, transferring glycosyl groups; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0; Bacteria - 312; Metazoa - 658; Fungi - 137; Plants - 199; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (reliability: 932.0) &  (original description: no original description)","protein_coding"
"Kfl00245_0060","kfl00245_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00254_0270","kfl00254_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00259_0060","kfl00259_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00260_0150","kfl00260_0150_v1.1","Klebsormidium nitens","(at3g55070 : 442.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 813 Blast hits to 810 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 347; Fungi - 254; Plants - 147; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 884.0) &  (original description: no original description)","protein_coding"
"Kfl00285_0010","kfl00285_0010_v1.1","Klebsormidium nitens","(at5g23150 : 115.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have  reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances  AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"Kfl00287_0040","kfl00287_0040_v1.1","Klebsormidium nitens","(at5g16270 : 132.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"Kfl00291_0070","kfl00291_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00304_0030","kfl00304_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00305_0110","kfl00305_0110_v1.1","Klebsormidium nitens","(q9sxu1|psa7_cicar : 362.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at3g51260 : 356.0) 20S proteosomal alpha subunits.  Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.; 20S proteasome  alpha subunit PAD1 (PAD1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome alpha subunit D2 (TAIR:AT5G66140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"Kfl00351_0050","kfl00351_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00357_0010","kfl00357_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00395_0140","kfl00395_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00395_0150","kfl00395_0150_v1.1","Klebsormidium nitens","(at5g51030 : 197.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G61830.1); Has 71841 Blast hits to 71789 proteins in 3167 species: Archae - 666; Bacteria - 49161; Metazoa - 4545; Fungi - 3057; Plants - 2484; Viruses - 2; Other Eukaryotes - 11926 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00402_0090","kfl00402_0090_v1.1","Klebsormidium nitens","(at3g47610 : 200.0) transcription regulators;zinc ion binding; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2HC5-type (InterPro:IPR009349); Has 342 Blast hits to 320 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"Kfl00415_0110","kfl00415_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00418_0110","kfl00418_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00418_0120","kfl00418_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00433_0080","kfl00433_0080_v1.1","Klebsormidium nitens","(at1g33390 : 423.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"Kfl00478_0020","kfl00478_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00550_0070","kfl00550_0070_v1.1","Klebsormidium nitens","(at1g73960 : 656.0) TBP-associated factor 2 (TAF2); FUNCTIONS IN: metallopeptidase activity, zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1312.0) &  (original description: no original description)","protein_coding"
"Kfl00557_0070","kfl00557_0070_v1.1","Klebsormidium nitens","(at3g12640 : 82.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"Kfl00602_0050","kfl00602_0050_v1.1","Klebsormidium nitens","(at5g47690 : 585.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1170.0) &  (original description: no original description)","protein_coding"
"Kfl00621_0040","kfl00621_0040_v1.1","Klebsormidium nitens","(at1g25540 : 97.8) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions.  Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions.  Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"Kfl00673_0030","kfl00673_0030_v1.1","Klebsormidium nitens","(at2g31970 : 1003.0) Encodes the Arabidopsis RAD50 homologue.  It is involved in double strand break repair. Component of the meiotic recombination complex that processes  meiotic double-strand-breaks to produce single-stranded DNA  ends, which act in the homology search and recombination.  Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.; RAD50; FUNCTIONS IN: zinc ion binding, ATP binding, nuclease activity; INVOLVED IN: DNA repair, double-strand break repair, telomere capping, mitotic recombination, telomere maintenance; LOCATED IN: nucleus, Mre11 complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc hook, Rad50 (InterPro:IPR013134), Rad50 zinc hook (InterPro:IPR007517), Recombination/repair protein Rad50 (InterPro:IPR004584); Has 105617 Blast hits to 56308 proteins in 2913 species: Archae - 1820; Bacteria - 19240; Metazoa - 45759; Fungi - 8381; Plants - 4805; Viruses - 470; Other Eukaryotes - 25142 (source: NCBI BLink). & (reliability: 2006.0) &  (original description: no original description)","protein_coding"
"Kfl00692_0060","kfl00692_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00744_0030","kfl00744_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g05580","No alias","Oryza sativa","Exo70 exocyst complex subunit family, putative, expressed","protein_coding"
"LOC_Os01g10030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g11200","No alias","Oryza sativa","transforming protein myb, putative, expressed","protein_coding"
"LOC_Os01g16020","No alias","Oryza sativa","FAD binding domain containing protein, expressed","protein_coding"
"LOC_Os01g24450","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g26390","No alias","Oryza sativa","TKL_IRAK_DUF26-lh.1 - DUF26 kinases have homology to DUF26 containing loci, expressed","protein_coding"
"LOC_Os01g27260","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os01g38180","No alias","Oryza sativa","peptidyl-prolyl isomerase, putative, expressed","protein_coding"
"LOC_Os01g50820","No alias","Oryza sativa","transporter, major facilitator family, putative, expressed","protein_coding"
"LOC_Os01g59620","No alias","Oryza sativa","histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed","protein_coding"
"LOC_Os01g59970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g61200","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os01g63940","No alias","Oryza sativa","Transcription initiation factor TFIID subunit A containing protein, expressed","protein_coding"
"LOC_Os01g65540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g72630","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g74110","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os02g02230","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g03780","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os02g11670","No alias","Oryza sativa","glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os02g18990","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os02g19140","No alias","Oryza sativa","seven in absentia protein family domain containing protein, expressed","protein_coding"
"LOC_Os02g25230","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g34590","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g37770","No alias","Oryza sativa","lecithin cholesterol acyltransferase, putative, expressed","protein_coding"
"LOC_Os02g37780","No alias","Oryza sativa","lecithine cholesterol acyltransferase, putative, expressed","protein_coding"
"LOC_Os02g39200","No alias","Oryza sativa","nucleotide-sugar transporter family protein, putative, expressed","protein_coding"
"LOC_Os02g49140","No alias","Oryza sativa","glycosyltransferase, putative, expressed","protein_coding"
"LOC_Os02g50270","No alias","Oryza sativa","ankyrin repeat-containing protein, putative, expressed","protein_coding"
"LOC_Os02g57350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g58250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g01710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g05460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g07234","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os03g13984","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g14720","No alias","Oryza sativa","transcription initiation factor IIF, alpha subunit domain containing protein, expressed","protein_coding"
"LOC_Os03g16770","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os03g18140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g19520","No alias","Oryza sativa","cyclin-related protein, putative, expressed","protein_coding"
"LOC_Os03g25760","No alias","Oryza sativa","calmodulin-binding protein, putative, expressed","protein_coding"
"LOC_Os03g39010","No alias","Oryza sativa","possible lysine decarboxylase domain containing protein, expressed","protein_coding"
"LOC_Os03g39980","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g41460","No alias","Oryza sativa","CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os03g42710","No alias","Oryza sativa","WD-40 repeat family protein, putative, expressed","protein_coding"
"LOC_Os03g47270","No alias","Oryza sativa","GCRP4 - Glycine and cysteine rich family protein precursor, expressed","protein_coding"
"LOC_Os03g59530","No alias","Oryza sativa","protein Kinase-associated protein phosphatase, putative, expressed","protein_coding"
"LOC_Os03g60470","No alias","Oryza sativa","glycine-rich protein A3, putative, expressed","protein_coding"
"LOC_Os03g61410","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g63280","No alias","Oryza sativa","regulatory protein, putative, expressed","protein_coding"
"LOC_Os04g07970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g52700","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g53540","No alias","Oryza sativa","homeobox and START domains containing protein, putative, expressed","protein_coding"
"LOC_Os04g54380","No alias","Oryza sativa","aluminum resistance protein, putative, expressed","protein_coding"
"LOC_Os05g01060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g02670","No alias","Oryza sativa","kinesin motor domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g08100","No alias","Oryza sativa","DNA replication licensing factor MCM3 homolog 3, putative, expressed","protein_coding"
"LOC_Os05g13320","No alias","Oryza sativa","C4-dicarboxylate transporter/malic acid transport protein, expressed","protein_coding"
"LOC_Os05g29790","No alias","Oryza sativa","pectinesterase, putative, expressed","protein_coding"
"LOC_Os05g42200","No alias","Oryza sativa","cyclin-B1-1, putative, expressed","protein_coding"
"LOC_Os05g48360","No alias","Oryza sativa","membrane attack complex component/perforin/complement C9, putative, expressed","protein_coding"
"LOC_Os05g49260","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding"
"LOC_Os05g50170","No alias","Oryza sativa","ATPCME, putative, expressed","protein_coding"
"LOC_Os06g08310","No alias","Oryza sativa","plasma membrane ATPase, putative, expressed","protein_coding"
"LOC_Os06g13820","No alias","Oryza sativa","dynamin, putative, expressed","protein_coding"
"LOC_Os06g34290","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os06g37224","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os06g42330","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g47040","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g07900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g12940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g15570","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os07g23169","No alias","Oryza sativa","methyltransferase, putative, expressed","protein_coding"
"LOC_Os07g28840","No alias","Oryza sativa","SET domain containing protein, expressed","protein_coding"
"LOC_Os07g42440","No alias","Oryza sativa","hydroxyacid oxidase 1, putative, expressed","protein_coding"
"LOC_Os08g02900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g03540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g06330","No alias","Oryza sativa","zinc finger C-x8-C-x5-C-x3-H type family protein, expressed","protein_coding"
"LOC_Os08g17970","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g20420","No alias","Oryza sativa","MGD2, putative, expressed","protein_coding"
"LOC_Os08g36420","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os08g36660","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g39100","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os09g19920","No alias","Oryza sativa","metallo-beta-lactamase family protein, putative, expressed","protein_coding"
"LOC_Os09g23640","No alias","Oryza sativa","ABC-2 type transporter domain containing protein, expressed","protein_coding"
"LOC_Os09g32930","No alias","Oryza sativa","retrotransposon protein, putative, SINE subclass, expressed","protein_coding"
"LOC_Os09g33600","No alias","Oryza sativa","ARF GTPase-activating domain-containing protein, putative, expressed","protein_coding"
"LOC_Os10g02500","No alias","Oryza sativa","serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed","protein_coding"
"LOC_Os10g04140","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os10g06760","No alias","Oryza sativa","receptor-like protein kinase precursor, putative, expressed","protein_coding"
"LOC_Os10g10620","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding"
"LOC_Os10g10990","No alias","Oryza sativa","transcription initiation factor IIF, alpha subunit domain containing protein, expressed","protein_coding"
"LOC_Os10g20700","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g36880","No alias","Oryza sativa","kinesin motor domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g37190","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os10g37520","No alias","Oryza sativa","major facilitator superfamily domain-containing protein 5, putative, expressed","protein_coding"
"LOC_Os10g41650","No alias","Oryza sativa","OsFBX392 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os11g09350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g28490","No alias","Oryza sativa","ent-kaurene synthase B, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os11g29100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g31700","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g40970","No alias","Oryza sativa","receptor-like protein kinase precursor, putative, expressed","protein_coding"
"LOC_Os11g44520","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g10920","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g16230","No alias","Oryza sativa","exostosin, putative, expressed","protein_coding"
"Mp1g07870.1","No alias","Marchantia polymorpha","plastidial mRNA chaperone (RLSB/BSF)","protein_coding"
"Mp1g10300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g17820.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g20560.1","No alias","Marchantia polymorpha","component CBP20 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)","protein_coding"
"Mp1g21410.1","No alias","Marchantia polymorpha","hydroxy-tetrahydrodihydrodipicolinate synthase","protein_coding"
"Mp1g21820.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g22530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g22560.1","No alias","Marchantia polymorpha","transcription factor (mTERF)","protein_coding"
"Mp1g25070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g27670.1","No alias","Marchantia polymorpha","KEG signal transducer of abscisic acid perception","protein_coding"
"Mp1g29800.1","No alias","Marchantia polymorpha","ribulose-phosphate 3-epimerase","protein_coding"
"Mp2g00760.1","No alias","Marchantia polymorpha","histone (H2A)","protein_coding"
"Mp2g00960.1","No alias","Marchantia polymorpha","type-I-residues E3 ubiquitin ligase (PRT6)","protein_coding"
"Mp2g03880.1","No alias","Marchantia polymorpha","component FtsH4|11 of FtsH mitochondrial protease complexes","protein_coding"
"Mp2g07590.1","No alias","Marchantia polymorpha","mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex","protein_coding"
"Mp2g08020.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica (sp|q6z4k6|rh52b_orysj : 691.0)","protein_coding"
"Mp2g08400.1","No alias","Marchantia polymorpha","Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana (sp|q94cj5|rer4_arath : 409.0)","protein_coding"
"Mp2g12900.1","No alias","Marchantia polymorpha","diacylglycerol kinase","protein_coding"
"Mp2g13680.1","No alias","Marchantia polymorpha","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana (sp|q38953|deah5_arath : 1533.0)","protein_coding"
"Mp2g18400.1","No alias","Marchantia polymorpha","poly(A) RNA polymerase regulatory protein","protein_coding"
"Mp2g23790.1","No alias","Marchantia polymorpha","protease (SBT6.2)","protein_coding"
"Mp3g04620.1","No alias","Marchantia polymorpha","Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana (sp|q9fkh6|b561p_arath : 195.0)","protein_coding"
"Mp3g06680.1","No alias","Marchantia polymorpha","RING-H2-class E3 ligase","protein_coding"
"Mp3g07770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g09020.1","No alias","Marchantia polymorpha","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Mp3g13650.1","No alias","Marchantia polymorpha","deubiquitinase (UBP24)","protein_coding"
"Mp3g15030.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Iswi)","protein_coding"
"Mp3g17970.1","No alias","Marchantia polymorpha","protein kinase (MAP3K-MEKK)","protein_coding"
"Mp3g21770.1","No alias","Marchantia polymorpha","phosphatidic acid phosphatase","protein_coding"
"Mp4g15030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g15300.1","No alias","Marchantia polymorpha","ubiquitin-activating E1 protein","protein_coding"
"Mp4g21620.1","No alias","Marchantia polymorpha","monomeric E3 ubiquitin ligase (HECT)","protein_coding"
"Mp5g00560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g01200.1","No alias","Marchantia polymorpha","p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)","protein_coding"
"Mp5g13560.1","No alias","Marchantia polymorpha","RNA-binding protein BRN1 OS=Arabidopsis thaliana (sp|q8lfs6|brn1l_arath : 393.0)","protein_coding"
"Mp6g00080.1","No alias","Marchantia polymorpha","tyrosine-tRNA ligase","protein_coding"
"Mp6g01620.1","No alias","Marchantia polymorpha","acireductone dioxygenase","protein_coding"
"Mp6g03150.1","No alias","Marchantia polymorpha","linker histone (H1)","protein_coding"
"Mp7g01520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g01910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g01920.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g06700.1","No alias","Marchantia polymorpha","SNAP25 group Qbc-type SNARE protein","protein_coding"
"Mp7g07740.1","No alias","Marchantia polymorpha","Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana (sp|q9c8s9|rh48_arath : 525.0)","protein_coding"
"Mp7g14570.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica (sp|q7xmk8|rh6_orysj : 768.0)","protein_coding"
"Mp7g16910.1","No alias","Marchantia polymorpha","transcription factor (Trihelix)","protein_coding"
"Mp7g17300.1","No alias","Marchantia polymorpha","BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana (sp|q9m8j9|bpm2_arath : 526.0)","protein_coding"
"Mp7g17540.1","No alias","Marchantia polymorpha","small GTPase (ROP)","protein_coding"
"Mp7g18230.1","No alias","Marchantia polymorpha","component Pex14 of cargo-receptor docking complex","protein_coding"
"Mp8g04040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07260.1","No alias","Marchantia polymorpha","Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana (sp|f4jse7|edr2_arath : 823.0)","protein_coding"
"Mp8g07310.1","No alias","Marchantia polymorpha","transcription factor (ARID)","protein_coding"
"Mp8g08590.1","No alias","Marchantia polymorpha","valine/leucine/isoleucine aminotransferase. valine/leucine/isoleucine aminotransferase. branched-chain aminotransferase (BCAT)","protein_coding"
"Mp8g08800.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g09710.1","No alias","Marchantia polymorpha","MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana (sp|q9m2j5|mcc16_arath : 92.4)","protein_coding"
"Mp8g11850.1","No alias","Marchantia polymorpha","transcription factor (SBP). copper homeostasis regulator (SPL7)","protein_coding"
"Mp8g16970.1","No alias","Marchantia polymorpha","phosphoglycerate dehydrogenase","protein_coding"
"MpVg00510.1","No alias","Marchantia polymorpha","No annotation","protein_coding"
"MpVg01160.1","No alias","Marchantia polymorpha","No annotation","protein_coding"
"Potri.006G009100","No alias","Populus trichocarpa","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Potri.016G015100","No alias","Populus trichocarpa","transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors","protein_coding"
"Pp1s192_79V6","No alias","Physcomitrella patens","T10F18.4; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s1_420V6","No alias","Physcomitrella patens","T1P17.200; transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein [KO:K03138] [Arabidopsis thaliana]","protein_coding"
"Pp1s29_312V6","No alias","Physcomitrella patens","F18L15.170; SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s31_400V6","No alias","Physcomitrella patens","contains ESTs C73458(E4155),AU165710(E4155) [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s35_286V6","No alias","Physcomitrella patens","T23A1.5; ubiquitin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s391_44V6","No alias","Physcomitrella patens","T26I12.80; splicing factor, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s48_37V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s55_201V6","No alias","Physcomitrella patens","F8L15.180; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s60_261V6","No alias","Physcomitrella patens","beta-ketoacyl-acp synthase ii","protein_coding"
"Pp1s89_68V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"PSME_00000121-RA","No alias","Pseudotsuga menziesii","(at5g16390 : 144.0) Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.; BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1); FUNCTIONS IN: acetyl-CoA carboxylase activity, biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: biotin carboxyl carrier protein 2 (TAIR:AT5G15530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42783|bccp_soybn : 140.0) Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) - Glycine max (Soybean) & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00000340-RA","No alias","Pseudotsuga menziesii","(at1g05000 : 211.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"PSME_00000684-RA","No alias","Pseudotsuga menziesii","(at5g11040 : 1385.0) TRS120; CONTAINS InterPro DOMAIN/s: Transport protein Trs120 (InterPro:IPR013935); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2770.0) &  (original description: no original description)","protein_coding"
"PSME_00000976-RA","No alias","Pseudotsuga menziesii","(at3g09350 : 445.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70.  Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance.  Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 890.0) &  (original description: no original description)","protein_coding"
"PSME_00001066-RA","No alias","Pseudotsuga menziesii","(at3g23660 : 696.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2). & (reliability: 1392.0) &  (original description: no original description)","protein_coding"
"PSME_00001510-RA","No alias","Pseudotsuga menziesii","(at2g44900 : 697.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 1366.0) &  (original description: no original description)","protein_coding"
"PSME_00001751-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002215-RA","No alias","Pseudotsuga menziesii","(at2g40060 : 157.0) Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00002512-RA","No alias","Pseudotsuga menziesii","(at5g65930 : 1540.0) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.; ZWICHEL (ZWI); CONTAINS InterPro DOMAIN/s: FERM central domain (InterPro:IPR019748), Prismane-like (InterPro:IPR011254), MyTH4 domain (InterPro:IPR000857), Kinesin, motor domain (InterPro:IPR001752), Band 4.1 domain (InterPro:IPR019749), FERM, N-terminal (InterPro:IPR018979), Kinesin, motor region, conserved site (InterPro:IPR019821), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), FERM domain (InterPro:IPR000299); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2). & (p46869|fla10_chlre : 215.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 3080.0) &  (original description: no original description)","protein_coding"
"PSME_00002523-RA","No alias","Pseudotsuga menziesii","(at4g39080 : 1061.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2122.0) &  (original description: no original description)","protein_coding"
"PSME_00002667-RA","No alias","Pseudotsuga menziesii","(at5g57460 : 585.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 1170.0) &  (original description: no original description)","protein_coding"
"PSME_00003145-RA","No alias","Pseudotsuga menziesii","(at3g09630 : 579.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"PSME_00003364-RA","No alias","Pseudotsuga menziesii","(at3g13300 : 623.0) Encodes VCS (VARICOSE).   Involved in mRNA decapping.  VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570).  Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro.  DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies.  Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology.  VCS is also required for leaf development.; VARICOSE (VCS); FUNCTIONS IN: protein homodimerization activity, nucleotide binding; INVOLVED IN: mRNA catabolic process, deadenylation-independent decapping of nuclear-transcribed mRNA, leaf morphogenesis; LOCATED IN: cytosol, nucleus, cytoplasmic mRNA processing body; EXPRESSED IN: whole plant, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: varicose-related (TAIR:AT3G13290.1); Has 885 Blast hits to 799 proteins in 264 species: Archae - 2; Bacteria - 218; Metazoa - 230; Fungi - 185; Plants - 114; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 1246.0) &  (original description: no original description)","protein_coding"
"PSME_00003735-RA","No alias","Pseudotsuga menziesii","(at5g18230 : 453.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"PSME_00004089-RA","No alias","Pseudotsuga menziesii","(at5g55960 : 606.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1212.0) &  (original description: no original description)","protein_coding"
"PSME_00004199-RA","No alias","Pseudotsuga menziesii","(at3g10660 : 288.0) predicted to encode calcium-dependent  protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal,  to A prevented the meristoylation .  The G to A mutation decreased AtCPK2 membrane association by approximately 50%.; calmodulin-domain protein kinase cdpk isoform 2 (CPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 145304 Blast hits to 132515 proteins in 4265 species: Archae - 224; Bacteria - 17128; Metazoa - 53382; Fungi - 18632; Plants - 28672; Viruses - 609; Other Eukaryotes - 26657 (source: NCBI BLink). & (p53684|cdpk3_orysa : 244.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00004453-RA","No alias","Pseudotsuga menziesii","(at1g08370 : 149.0) Encodes DCP1 involved in mRNA decapping.  DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro.  DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies.  Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00005128-RA","No alias","Pseudotsuga menziesii","(at2g29580 : 583.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: CCCH-type zinc fingerfamily protein with RNA-binding domain (TAIR:AT1G07360.1); Has 12789 Blast hits to 10406 proteins in 530 species: Archae - 8; Bacteria - 415; Metazoa - 5528; Fungi - 2943; Plants - 2628; Viruses - 129; Other Eukaryotes - 1138 (source: NCBI BLink). & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"PSME_00006037-RA","No alias","Pseudotsuga menziesii","(at5g14520 : 616.0) pescadillo-related; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: cell proliferation; LOCATED IN: nucleolus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pescadillo, N-terminal (InterPro:IPR010613), BRCT (InterPro:IPR001357); Has 503 Blast hits to 494 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 168; Plants - 48; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 1232.0) &  (original description: no original description)","protein_coding"
"PSME_00006062-RA","No alias","Pseudotsuga menziesii","(at1g06220 : 1557.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 574.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 3114.0) &  (original description: no original description)","protein_coding"
"PSME_00006155-RA","No alias","Pseudotsuga menziesii","(at4g36760 : 738.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (reliability: 1476.0) &  (original description: no original description)","protein_coding"
"PSME_00006396-RA","No alias","Pseudotsuga menziesii","(at4g32850 : 795.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1590.0) &  (original description: no original description)","protein_coding"
"PSME_00006534-RA","No alias","Pseudotsuga menziesii","(at5g51980 : 300.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: zinc finger WD40 repeat protein 1 (TAIR:AT4G25440.1); Has 29113 Blast hits to 15916 proteins in 570 species: Archae - 36; Bacteria - 4384; Metazoa - 10765; Fungi - 6879; Plants - 3369; Viruses - 0; Other Eukaryotes - 3680 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00006609-RA","No alias","Pseudotsuga menziesii","(at3g07810 : 257.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (q08935|roc1_nicsy : 97.4) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"PSME_00006941-RA","No alias","Pseudotsuga menziesii","(at2g18510 : 331.0) embryo defective 2444 (emb2444); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 66829 Blast hits to 41224 proteins in 1633 species: Archae - 50; Bacteria - 5635; Metazoa - 30219; Fungi - 10282; Plants - 12025; Viruses - 917; Other Eukaryotes - 7701 (source: NCBI BLink). & (q08935|roc1_nicsy : 84.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00007847-RA","No alias","Pseudotsuga menziesii","(at5g22770 : 1409.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 2818.0) &  (original description: no original description)","protein_coding"
"PSME_00008125-RA","No alias","Pseudotsuga menziesii","(at4g11420 : 927.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (q40554|if3a_tobac : 914.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1854.0) &  (original description: no original description)","protein_coding"
"PSME_00009246-RA","No alias","Pseudotsuga menziesii","(at5g63840 : 1271.0) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04931|aglu_betvu : 303.0) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) - Beta vulgaris (Sugar beet) & (reliability: 2542.0) &  (original description: no original description)","protein_coding"
"PSME_00010872-RA","No alias","Pseudotsuga menziesii","(at5g40200 : 783.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1566.0) &  (original description: no original description)","protein_coding"
"PSME_00011088-RA","No alias","Pseudotsuga menziesii","(at1g08370 : 258.0) Encodes DCP1 involved in mRNA decapping.  DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro.  DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies.  Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.; decapping 1 (DCP1); CONTAINS InterPro DOMAIN/s: Dcp1-like decapping (InterPro:IPR010334); Has 3561 Blast hits to 2917 proteins in 377 species: Archae - 4; Bacteria - 239; Metazoa - 1310; Fungi - 561; Plants - 741; Viruses - 142; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00012209-RA","No alias","Pseudotsuga menziesii","(at1g80070 : 3342.0) a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.; ABNORMAL SUSPENSOR 2 (SUS2); INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555), Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding (InterPro:IPR019581), Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591), PROCN (InterPro:IPR012592), Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding (InterPro:IPR019580), PRP8 domain IV core (InterPro:IPR021983), PRO, C-terminal (InterPro:IPR012984), RNA recognition motif, spliceosomal PrP8 (InterPro:IPR019582); BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1); Has 828 Blast hits to 729 proteins in 312 species: Archae - 0; Bacteria - 2; Metazoa - 333; Fungi - 220; Plants - 69; Viruses - 2; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 6684.0) &  (original description: no original description)","protein_coding"
"PSME_00012407-RA","No alias","Pseudotsuga menziesii","(at1g20980 : 525.0) Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture.; squamosa promoter binding protein-like 14 (SPL14); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to bacterium, regulation of transcription; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (TAIR:AT1G76580.1); Has 1851 Blast hits to 1143 proteins in 117 species: Archae - 0; Bacteria - 38; Metazoa - 215; Fungi - 101; Plants - 958; Viruses - 0; Other Eukaryotes - 539 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"PSME_00012874-RA","No alias","Pseudotsuga menziesii","(at2g20000 : 620.0) Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.; HOBBIT (HBT); FUNCTIONS IN: binding; INVOLVED IN: in 10 processes; LOCATED IN: anaphase-promoting complex, nucleus, cell plate, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 19127 Blast hits to 10740 proteins in 1344 species: Archae - 1126; Bacteria - 9300; Metazoa - 1888; Fungi - 782; Plants - 572; Viruses - 0; Other Eukaryotes - 5459 (source: NCBI BLink). & (reliability: 1240.0) &  (original description: no original description)","protein_coding"
"PSME_00013038-RA","No alias","Pseudotsuga menziesii","(at3g18060 : 851.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (reliability: 1702.0) &  (original description: no original description)","protein_coding"
"PSME_00013466-RA","No alias","Pseudotsuga menziesii","(at5g13020 : 231.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00013828-RA","No alias","Pseudotsuga menziesii","(at4g11380 : 1413.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 2826.0) &  (original description: no original description)","protein_coding"
"PSME_00014007-RA","No alias","Pseudotsuga menziesii","(at3g07660 : 333.0) Kinase-related protein of unknown function (DUF1296); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: Kinase-related protein of unknown function (DUF1296) (TAIR:AT3G13990.1); Has 3086 Blast hits to 1914 proteins in 327 species: Archae - 2; Bacteria - 372; Metazoa - 1089; Fungi - 466; Plants - 245; Viruses - 13; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00014113-RA","No alias","Pseudotsuga menziesii","(at5g58230 : 754.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1508.0) &  (original description: no original description)","protein_coding"
"PSME_00014907-RA","No alias","Pseudotsuga menziesii","(at1g72710 : 598.0) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.; casein kinase 1-like protein 2 (CKL2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 69362 Blast hits to 63919 proteins in 2309 species: Archae - 34; Bacteria - 10202; Metazoa - 23661; Fungi - 6612; Plants - 12027; Viruses - 386; Other Eukaryotes - 16440 (source: NCBI BLink). & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"PSME_00015743-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00015939-RA","No alias","Pseudotsuga menziesii","(at2g29080 : 666.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (o82150|ftsh_tobac : 315.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1308.0) &  (original description: no original description)","protein_coding"
"PSME_00016707-RA","No alias","Pseudotsuga menziesii","(p31251|ube12_wheat : 1493.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 1473.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 2946.0) &  (original description: no original description)","protein_coding"
"PSME_00016965-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 683.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 142.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1366.0) &  (original description: no original description)","protein_coding"
"PSME_00017674-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 920.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 1840.0) &  (original description: no original description)","protein_coding"
"PSME_00018133-RA","No alias","Pseudotsuga menziesii","(at3g09560 : 357.0) Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"PSME_00018575-RA","No alias","Pseudotsuga menziesii","(at5g46190 : 345.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G18375.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00018706-RA","No alias","Pseudotsuga menziesii","(at1g34220 : 362.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G35730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"PSME_00018891-RA","No alias","Pseudotsuga menziesii","(at5g44180 : 906.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 1812.0) &  (original description: no original description)","protein_coding"
"PSME_00019346-RA","No alias","Pseudotsuga menziesii","(at4g26970 : 181.0) Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro.; aconitase 2 (ACO2); FUNCTIONS IN: aconitate hydratase activity, copper ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, isocitrate metabolic process, citrate metabolic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase family, 4Fe-4S cluster binding site (InterPro:IPR018136), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Aconitase A/isopropylmalate dehydratase small subunit, swivel (InterPro:IPR000573), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase (InterPro:IPR015934), Aconitase/3-isopropylmalate dehydratase, swivel (InterPro:IPR015928), Aconitase-like core (InterPro:IPR015937), Aconitase/iron regulatory protein 2 (InterPro:IPR006249), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 3 (TAIR:AT2G05710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49608|acoc_cucma : 159.0) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00020443-RA","No alias","Pseudotsuga menziesii","(at2g34357 : 709.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G23540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1418.0) &  (original description: no original description)","protein_coding"
"PSME_00021801-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 293.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00022884-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 2563.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 5126.0) &  (original description: no original description)","protein_coding"
"PSME_00023293-RA","No alias","Pseudotsuga menziesii","(q9swf9|zfnl_pea : 122.0) Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea) & (at1g04990 : 115.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 2 (TAIR:AT2G32930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00023936-RA","No alias","Pseudotsuga menziesii","(at2g27100 : 640.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development  such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00024192-RA","No alias","Pseudotsuga menziesii","(at3g12640 : 213.0) RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: mRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Splicing factor PWI (InterPro:IPR002483); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G24350.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"PSME_00025971-RA","No alias","Pseudotsuga menziesii","(at2g45240 : 605.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (reliability: 1210.0) &  (original description: no original description)","protein_coding"
"PSME_00027719-RA","No alias","Pseudotsuga menziesii","(at5g38470 : 294.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23D (RAD23D); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: response to cold, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), XPC-binding domain (InterPro:IPR015360), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT3G02540.3); Has 11236 Blast hits to 6362 proteins in 878 species: Archae - 4; Bacteria - 655; Metazoa - 4543; Fungi - 1476; Plants - 2522; Viruses - 172; Other Eukaryotes - 1864 (source: NCBI BLink). & (q40742|rad23_orysa : 256.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"PSME_00028773-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00029013-RA","No alias","Pseudotsuga menziesii","(at1g32790 : 313.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00029184-RA","No alias","Pseudotsuga menziesii","(at5g39840 : 882.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1764.0) &  (original description: no original description)","protein_coding"
"PSME_00031473-RA","No alias","Pseudotsuga menziesii","(at2g43160 : 231.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00031558-RA","No alias","Pseudotsuga menziesii","(at1g72650 : 101.0) Arabidopsis thaliana myb family transcription factor (At1g72650); TRF-like 6 (TRFL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, response to salt stress; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 3 (TAIR:AT1G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00032667-RA","No alias","Pseudotsuga menziesii","(q6es10|hat1_orysa : 253.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (at5g56740 : 250.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of  lysine 12 of histone H4 reduces radioactive acetylation by  HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00032783-RA","No alias","Pseudotsuga menziesii","(at3g17850 : 927.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G48490.3); Has 127463 Blast hits to 124461 proteins in 4737 species: Archae - 199; Bacteria - 14974; Metazoa - 47504; Fungi - 13120; Plants - 28745; Viruses - 516; Other Eukaryotes - 22405 (source: NCBI BLink). & (p15792|kpk1_phavu : 102.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1854.0) &  (original description: no original description)","protein_coding"
"PSME_00034438-RA","No alias","Pseudotsuga menziesii","(at1g13980 : 2105.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 4210.0) &  (original description: no original description)","protein_coding"
"PSME_00034465-RA","No alias","Pseudotsuga menziesii","(at5g19130 : 306.0) GPI transamidase component family protein / Gaa1-like family protein; FUNCTIONS IN: GPI-anchor transamidase activity; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosylphosphatidylinositol:protein transamidase complex, GAA1 component (InterPro:IPR017063), Gaa1-like, GPI transamidase component (InterPro:IPR007246); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00035382-RA","No alias","Pseudotsuga menziesii","(at2g26140 : 879.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 347.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1758.0) &  (original description: no original description)","protein_coding"
"PSME_00035770-RA","No alias","Pseudotsuga menziesii","(at3g15970 : 275.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT1G52380.1); Has 4078 Blast hits to 2719 proteins in 441 species: Archae - 18; Bacteria - 1103; Metazoa - 1379; Fungi - 710; Plants - 228; Viruses - 8; Other Eukaryotes - 632 (source: NCBI BLink). & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"PSME_00036946-RA","No alias","Pseudotsuga menziesii","(at5g15270 : 332.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00037484-RA","No alias","Pseudotsuga menziesii","(at5g53060 : 276.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"PSME_00037927-RA","No alias","Pseudotsuga menziesii","(at3g21480 : 166.0) BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 730 Blast hits to 680 proteins in 204 species: Archae - 4; Bacteria - 146; Metazoa - 309; Fungi - 49; Plants - 100; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00039652-RA","No alias","Pseudotsuga menziesii","(at4g12610 : 124.0) RAP74; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity, DNA binding, transcription activator activity, catalytic activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: shoot, root, guard cell; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IIF, alpha subunit (InterPro:IPR008851), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039); Has 34394 Blast hits to 22751 proteins in 1168 species: Archae - 120; Bacteria - 4390; Metazoa - 12539; Fungi - 6082; Plants - 2082; Viruses - 445; Other Eukaryotes - 8736 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00040287-RA","No alias","Pseudotsuga menziesii","(at2g32730 : 946.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 1892.0) &  (original description: no original description)","protein_coding"
"PSME_00040532-RA","No alias","Pseudotsuga menziesii","(at1g17210 : 744.0) IAP-like protein 1 (ILP1); FUNCTIONS IN: zinc ion binding; LOCATED IN: cytosol, nucleus, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935), Proteinase inhibitor I32, inhibitor of apoptosis (InterPro:IPR001370); BEST Arabidopsis thaliana protein match is: C3HC zinc finger-like  (TAIR:AT1G48950.1); Has 488 Blast hits to 287 proteins in 104 species: Archae - 2; Bacteria - 11; Metazoa - 108; Fungi - 61; Plants - 97; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (reliability: 1488.0) &  (original description: no original description)","protein_coding"
"PSME_00040896-RA","No alias","Pseudotsuga menziesii","(q43644|ndus1_soltu : 1106.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 1070.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I).  The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2140.0) &  (original description: no original description)","protein_coding"
"PSME_00041582-RA","No alias","Pseudotsuga menziesii","(at1g43690 : 580.0) ubiquitin interaction motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin interacting motif (InterPro:IPR003903); Has 368 Blast hits to 347 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 1160.0) &  (original description: no original description)","protein_coding"
"PSME_00046136-RA","No alias","Pseudotsuga menziesii","(at1g15990 : 435.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 7 (CNGC7); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to cadmium ion; LOCATED IN: membrane; EXPRESSED IN: male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel  8 (TAIR:AT1G19780.1); Has 3586 Blast hits to 3408 proteins in 277 species: Archae - 0; Bacteria - 66; Metazoa - 1555; Fungi - 86; Plants - 1001; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink). & (reliability: 870.0) &  (original description: no original description)","protein_coding"
"PSME_00049674-RA","No alias","Pseudotsuga menziesii","(at4g09510 : 912.0) CINV2 appears to function as a neutral invertase based on the phenotype of a  cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.; cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1824.0) &  (original description: no original description)","protein_coding"
"PSME_00053009-RA","No alias","Pseudotsuga menziesii","(at4g20440 : 155.0) small nuclear ribonucleoprotein associated protein B; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nucleoplasm, Cajal body, nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Small ribonucleoprotein associated, SmB/SmN (InterPro:IPR017131), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT5G44500.2); Has 66867 Blast hits to 32689 proteins in 1295 species: Archae - 65; Bacteria - 8747; Metazoa - 34794; Fungi - 7165; Plants - 8402; Viruses - 1350; Other Eukaryotes - 6344 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00053169-RA","No alias","Pseudotsuga menziesii","(at3g23330 : 471.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor  22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"PSME_00055258-RA","No alias","Pseudotsuga menziesii","(at4g10840 : 709.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G27960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1418.0) &  (original description: no original description)","protein_coding"
"PSME_00055764-RA","No alias","Pseudotsuga menziesii","(at1g14650 : 591.0) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SWAP/Surp (InterPro:IPR000061), Ubiquitin (InterPro:IPR000626), Pre-mRNA splicing factor PRP21 like protein (InterPro:IPR022030), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein (TAIR:AT1G14640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1182.0) &  (original description: no original description)","protein_coding"
"PSME_00057199-RA","No alias","Pseudotsuga menziesii","(at3g49500 : 925.0) Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.; RNA-dependent RNA polymerase 6 (RDR6); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 633 Blast hits to 609 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 284; Plants - 204; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 1850.0) &  (original description: no original description)","protein_coding"
"Seita.1G034700.1","No alias","Setaria italica ","subunit B of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Seita.1G063300.1","No alias","Setaria italica ","snRNP-associated protein *(SR140)","protein_coding"
"Seita.1G147900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G227500.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G269600.1","No alias","Setaria italica ","regulatory protein *(ORM) of serine C-palmitoyltransferase activity","protein_coding"
"Seita.1G309700.1","No alias","Setaria italica ","component *(MED23) of tail module of MEDIATOR transcription co-activator complex","protein_coding"
"Seita.1G344300.1","No alias","Setaria italica ","peptidyl-prolyl cis-trans isomerase *(CYP21-3) & EC_5.2 cis-trans-isomerase","protein_coding"
"Seita.2G274100.1","No alias","Setaria italica ","bZIP class-I transcription factor","protein_coding"
"Seita.2G359600.1","No alias","Setaria italica ","Nardilysin-like peptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.3G001300.1","No alias","Setaria italica ","chromatin remodeling factor *(ERCC6)","protein_coding"
"Seita.3G097600.1","No alias","Setaria italica ","methylation reader Alfin of PRC1 complex","protein_coding"
"Seita.3G181700.1","No alias","Setaria italica ","component *(ESP1) of Cleavage Stimulatory Factor (CstF) complex","protein_coding"
"Seita.3G223600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G225300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G343000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G363000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G131700.1","No alias","Setaria italica ","E3 ubiquitin ligase component *(HRD1) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Seita.4G132000.1","No alias","Setaria italica ","proteasome core particle assembly factor *(PA200)","protein_coding"
"Seita.4G139600.1","No alias","Setaria italica ","reticulophagy cargo receptor *(C53)","protein_coding"
"Seita.4G177000.1","No alias","Setaria italica ","brassinosteroid signalling protein kinase *(BIN2) & GSK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G200900.1","No alias","Setaria italica ","component *(OS9) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Seita.4G262600.1","No alias","Setaria italica ","subunit alpha of RAB-GTPase geranylgeranyltransferase (RGT) complex & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Seita.5G111900.1","No alias","Setaria italica ","nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)","protein_coding"
"Seita.5G184800.1","No alias","Setaria italica ","ssRNA polymerase *(RDR6)","protein_coding"
"Seita.5G225400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G265600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G336000.1","No alias","Setaria italica ","component *(SRP54) of SRP (signal recognition particle) complex","protein_coding"
"Seita.5G393100.1","No alias","Setaria italica ","histone *(H3) & R-type YKT6-group component of SNARE longin membrane fusion complex","protein_coding"
"Seita.5G420100.1","No alias","Setaria italica ","component *(VPS53/HIT1) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Seita.6G046000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G168900.1","No alias","Setaria italica ","component *(COG3) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Seita.6G239500.1","No alias","Setaria italica ","alpha-type-4 component *(PAD) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.7G003900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G006400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G152200.1","No alias","Setaria italica ","regulatory component *(RPN1) of 26S proteasome","protein_coding"
"Seita.7G283500.1","No alias","Setaria italica ","plastid division dynamin-like protein *(ARC5)","protein_coding"
"Seita.8G151600.1","No alias","Setaria italica ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G051300.1","No alias","Setaria italica ","component *(VPS35) of Retromer protein recycling complex","protein_coding"
"Seita.9G090600.1","No alias","Setaria italica ","component *(ADA2) of SAGA transcription co-activator complex","protein_coding"
"Seita.9G094500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G100200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G153100.1","No alias","Setaria italica ","protease *(RBL)","protein_coding"
"Seita.9G278200.1","No alias","Setaria italica ","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Seita.9G336400.1","No alias","Setaria italica ","EARP-specific component *(Syndetin-like) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Seita.9G459000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G467700.1","No alias","Setaria italica ","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Seita.9G527700.1","No alias","Setaria italica ","deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Sobic.001G118800.1","No alias","Sorghum bicolor ","component *(HOP2) of HOP2-MND1 presynaptic filament stabilization complex","protein_coding"
"Sobic.001G377800.2","No alias","Sorghum bicolor ","component *(eL18) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.001G435100.1","No alias","Sorghum bicolor ","subunit alpha of TFIIf basal transcription factor complex","protein_coding"
"Sobic.001G530800.1","No alias","Sorghum bicolor ","subunit delta *(CCT4) of CCT chaperonin folding complex","protein_coding"
"Sobic.002G217500.1","No alias","Sorghum bicolor ","scaffold component *(Sec13) of coat protein complex","protein_coding"
"Sobic.002G332100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G367800.1","No alias","Sorghum bicolor ","component *(mL104) of large mitoribosomal-subunit proteome & regulatory protein *(PNM1) of mitochondrial translation machinery","protein_coding"
"Sobic.003G109200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G219400.1","No alias","Sorghum bicolor ","regulatory protein *(UBA1/2) of UBP1 activity","protein_coding"
"Sobic.003G257200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G397700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G033500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G130200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G356300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G098000.1","No alias","Sorghum bicolor ","Serpin protease inhibitor","protein_coding"
"Sobic.006G032100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G041100.2","No alias","Sorghum bicolor ","mRNA endoribonuclease *(G3BP)","protein_coding"
"Sobic.007G185600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G018800.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase component *(NSE1) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.009G130100.1","No alias","Sorghum bicolor ","basic chitinase *(CHIB)","protein_coding"
"Sobic.009G134900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G023900.1","No alias","Sorghum bicolor ","component *(uS10) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.010G027800.1","No alias","Sorghum bicolor ","pre-60S ribosomal subunit assembly factor *(RPF1)","protein_coding"
"Sobic.010G057500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G189600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g005030","No alias","Solanum lycopersicum","MAP kinase kinase kinase 1","protein_coding"
"Solyc01g091460","No alias","Solanum lycopersicum","Brefeldin A-inhibited guanine nucleotide-exchange protein (AHRD V3.3 *** G7L099_MEDTR)","protein_coding"
"Solyc01g098040","No alias","Solanum lycopersicum","S-adenosylmethionine-dependent methyltransferase, putative (AHRD V3.3 *** B9REU9_RICCO)","protein_coding"
"Solyc01g102710","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g110300","No alias","Solanum lycopersicum","BAR and SH3 domain-containing protein","protein_coding"
"Solyc02g077850","No alias","Solanum lycopersicum","Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A0K9NYE0_ZOSMR)","protein_coding"
"Solyc02g086130","No alias","Solanum lycopersicum","DnaA initiator-associating diaA (AHRD V3.3 *** A0A0B0PTA6_GOSAR)","protein_coding"
"Solyc02g086200","No alias","Solanum lycopersicum","Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9S0T5_9ROSA)","protein_coding"
"Solyc02g093140","No alias","Solanum lycopersicum","CBS domain-containing protein-like (AHRD V3.3 *** B8AP73_ORYSI)","protein_coding"
"Solyc03g025550","No alias","Solanum lycopersicum","Signal peptide peptidase family protein (AHRD V3.3 *** B9I483_POPTR)","protein_coding"
"Solyc03g025600","No alias","Solanum lycopersicum","Pectinacetylesterase family protein (AHRD V3.3 *** AT5G23870.3)","protein_coding"
"Solyc03g025920","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** B9I4C3_POPTR)","protein_coding"
"Solyc03g026240","No alias","Solanum lycopersicum","Arginine/serine-rich splicing factor, putative (AHRD V3.3 *** B9R9G7_RICCO)","protein_coding"
"Solyc03g082480","No alias","Solanum lycopersicum","GRF1-interacting factor-like protein (AHRD V3.3 *-* A0A072TYG4_MEDTR)","protein_coding"
"Solyc03g113800","No alias","Solanum lycopersicum","Betaine aldehyde dehydrogenase (AHRD V3.3 *** A0A0B5EBW5_SOLTU)","protein_coding"
"Solyc03g118280","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RA74_RICCO)","protein_coding"
"Solyc03g120550","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1)","protein_coding"
"Solyc03g122040","No alias","Solanum lycopersicum","Erect panicle 2 protein (AHRD V3.3 *-* I2AW42_9POAL)","protein_coding"
"Solyc04g079830","No alias","Solanum lycopersicum","BEL1-like homeodomain protein 2 (AHRD V3.3 *** A0A0B2SBB1_GLYSO)","protein_coding"
"Solyc05g006760","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT1G27150.1)","protein_coding"
"Solyc05g009670","No alias","Solanum lycopersicum","Plasma-membrane choline transporter family protein (AHRD V3.3 *** AT1G25500.2)","protein_coding"
"Solyc05g052200","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** A0A0K9NZM3_ZOSMR)","protein_coding"
"Solyc06g068090","No alias","Solanum lycopersicum","phospholipase PLDa1","protein_coding"
"Solyc06g068560","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT1G79710.2)","protein_coding"
"Solyc07g042030","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061EC24_THECC)","protein_coding"
"Solyc07g054090","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RW07_RICCO)","protein_coding"
"Solyc07g054100","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RW07_RICCO)","protein_coding"
"Solyc07g062150","No alias","Solanum lycopersicum","NAD kinase (AHRD V3.3 *** F2Z9R6_NICBE)","protein_coding"
"Solyc07g063100","No alias","Solanum lycopersicum","Proton pump interactor 1 (AHRD V3.3 *** D5L6G0_SOLTU)","protein_coding"
"Solyc08g007330","No alias","Solanum lycopersicum","DNA mismatch repair protein mutS (AHRD V3.3 *** A0A0K9NP06_ZOSMR)","protein_coding"
"Solyc08g067770","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** A0A061GNC5_THECC)","protein_coding"
"Solyc08g079500","No alias","Solanum lycopersicum","Myeloid leukemia factor 1 (AHRD V3.3 *** A0A0B0Q1A9_GOSAR)","protein_coding"
"Solyc08g081000","No alias","Solanum lycopersicum","Transcription factor jumonji (JmjC) domain protein (AHRD V3.3 *** G7KC35_MEDTR)","protein_coding"
"Solyc09g066490","No alias","Solanum lycopersicum","Adaptin ear-binding coat-associated protein 1 (AHRD V3.3 *** A0A072VLL1_MEDTR)","protein_coding"
"Solyc09g097880","No alias","Solanum lycopersicum","DNA topoisomerase (AHRD V3.3 *** K4CWW0_SOLLC)","protein_coding"
"Solyc10g006540","No alias","Solanum lycopersicum","Formin-like protein (AHRD V3.3 *** K4CXI5_SOLLC)","protein_coding"
"Solyc10g008500","No alias","Solanum lycopersicum","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (AHRD V3.3 *** AT4G03410.2)","protein_coding"
"Solyc10g045600","No alias","Solanum lycopersicum","Transmembrane receptor, eukaryota (AHRD V3.3 *** A0A118JVM3_CYNCS)","protein_coding"
"Solyc10g086060","No alias","Solanum lycopersicum","SUN-like protein 30","protein_coding"
"Solyc11g012150","No alias","Solanum lycopersicum","Transcription initiation factor IIF alpha subunit family protein (AHRD V3.3 *** B9HCF8_POPTR)","protein_coding"
"Solyc11g012160","No alias","Solanum lycopersicum","fumarylacetoacetase (AHRD V3.3 *** AT1G12050.1)","protein_coding"
"Solyc11g017420","No alias","Solanum lycopersicum","transmembrane protein (DUF616) (AHRD V3.3 *** AT4G09630.2)","protein_coding"
"Solyc11g062410","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IHL6_SOLCH)","protein_coding"
"Solyc11g072490","No alias","Solanum lycopersicum","Interactor of constitutive active ROPs-like protein (AHRD V3.3 *** A0A072ULW0_MEDTR)","protein_coding"
"Solyc11g072520","No alias","Solanum lycopersicum","Arogenate dehydratase (AHRD V3.3 *** M1CDP7_SOLTU)","protein_coding"
"Solyc11g072950","No alias","Solanum lycopersicum","E3 UFM1-protein ligase 1 (AHRD V3.3 *** A0A103XPK8_CYNCS)","protein_coding"
"Solyc12g044740","No alias","Solanum lycopersicum","ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** AT3G21280.1)","protein_coding"
"Solyc12g049390","No alias","Solanum lycopersicum","Lung seven transmembrane receptor family protein (AHRD V3.3 *** AT1G72480.1)","protein_coding"
"Solyc12g087970","No alias","Solanum lycopersicum","Myb family transcription factor family protein (AHRD V3.3 *** B9GN48_POPTR)","protein_coding"
"Solyc12g089110","No alias","Solanum lycopersicum","dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit (AHRD V3.3 --* AT3G09455.2)","protein_coding"
"Sopen11g006940","No alias","Solanum pennellii","Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)","protein_coding"