"sequence_id","alias","species","description","type" "102902","No alias","Selaginella moellendorffii ","CONSTANS-like 5","protein_coding" "104600","No alias","Selaginella moellendorffii ","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding" "107448","No alias","Selaginella moellendorffii ","binding","protein_coding" "107849","No alias","Selaginella moellendorffii ","binding","protein_coding" "123397","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "128074","No alias","Selaginella moellendorffii ","associated molecule with the SH3 domain of STAM 1","protein_coding" "13166","No alias","Selaginella moellendorffii ","fatty acid desaturase 6","protein_coding" "133115","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "134250","No alias","Selaginella moellendorffii ","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "138704","No alias","Selaginella moellendorffii ","S-domain-2 5","protein_coding" "14131","No alias","Selaginella moellendorffii ","Adenosylmethionine decarboxylase family protein","protein_coding" "141996","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "143968","No alias","Selaginella moellendorffii ","lipase 1","protein_coding" "145426","No alias","Selaginella moellendorffii ","Uncharacterized protein family (UPF0016)","protein_coding" "146861","No alias","Selaginella moellendorffii ","Rubredoxin-like superfamily protein","protein_coding" "148158","No alias","Selaginella moellendorffii ","alpha-glucan phosphorylase 2","protein_coding" "149167","No alias","Selaginella moellendorffii ","sulfite oxidase","protein_coding" "149205","No alias","Selaginella moellendorffii ","ADPGLC-PPase large subunit","protein_coding" "149642","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding" "151384","No alias","Selaginella moellendorffii ","HEAT SHOCK PROTEIN 81.4","protein_coding" "166238","No alias","Selaginella moellendorffii ","Low PSII Accumulation 3","protein_coding" "168306","No alias","Selaginella moellendorffii ","tetratricopetide-repeat thioredoxin-like 1","protein_coding" "173087","No alias","Selaginella moellendorffii ","aspartate aminotransferase 5","protein_coding" "173461","No alias","Selaginella moellendorffii ","AFG1-like ATPase family protein","protein_coding" "173723","No alias","Selaginella moellendorffii ","polyubiquitin 10","protein_coding" "184750","No alias","Selaginella moellendorffii ","sulfate transporter 3;1","protein_coding" "228943","No alias","Selaginella moellendorffii ","polyubiquitin 10","protein_coding" "231918","No alias","Selaginella moellendorffii ","poly(A) polymerase 1","protein_coding" "231924","No alias","Selaginella moellendorffii ","nitrate reductase 1","protein_coding" "233481","No alias","Selaginella moellendorffii ","RAB GTPase homolog E1B","protein_coding" "24578","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "267755","No alias","Selaginella moellendorffii ","Glucose-1-phosphate adenylyltransferase family protein","protein_coding" "267815","No alias","Selaginella moellendorffii ","chloroplast heat shock protein 70-2","protein_coding" "270269","No alias","Selaginella moellendorffii ","myo-inositol-1-phosphate synthase 2","protein_coding" "270595","No alias","Selaginella moellendorffii ","zinc finger (Ran-binding) family protein","protein_coding" "271033","No alias","Selaginella moellendorffii ","Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein","protein_coding" "404798","No alias","Selaginella moellendorffii ","beta-galactosidase 8","protein_coding" "408263","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "409203","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "409247","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding" "410867","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "412012","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "412537","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "414563","No alias","Selaginella moellendorffii ","Sulfite exporter TauE/SafE family protein","protein_coding" "419690","No alias","Selaginella moellendorffii ","H(+)-ATPase 11","protein_coding" "419760","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "419769","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "421435","No alias","Selaginella moellendorffii ","Leucine-rich repeat (LRR) family protein","protein_coding" "431867","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "432445","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "432663","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "440291","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "440382","No alias","Selaginella moellendorffii ","heat shock cognate protein 70-1","protein_coding" "443120","No alias","Selaginella moellendorffii ","heat shock cognate protein 70-1","protein_coding" "445122","No alias","Selaginella moellendorffii ","mitochondrial lipoamide dehydrogenase 1","protein_coding" "446858","No alias","Selaginella moellendorffii ","heat shock cognate protein 70-1","protein_coding" "447197","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding" "447293","No alias","Selaginella moellendorffii ","Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "448006","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "68704","No alias","Selaginella moellendorffii ","oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor","protein_coding" "70673","No alias","Selaginella moellendorffii ","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding" "74719","No alias","Selaginella moellendorffii ","Acid phosphatase/vanadium-dependent haloperoxidase-related protein","protein_coding" "74857","No alias","Selaginella moellendorffii ","tripeptidyl peptidase ii","protein_coding" "81471","No alias","Selaginella moellendorffii ","Peptidase M28 family protein","protein_coding" "81650","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding" "84560","No alias","Selaginella moellendorffii ","GRAS family transcription factor","protein_coding" "85074","No alias","Selaginella moellendorffii ","Nucleotide-sugar transporter family protein","protein_coding" "86139","No alias","Selaginella moellendorffii ","sister-chromatid cohesion protein 3","protein_coding" "88186","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding" "89062","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "89667","No alias","Selaginella moellendorffii ","actin-related protein 8","protein_coding" "99386","No alias","Selaginella moellendorffii ","Chlorophyll A-B binding family protein","protein_coding" "99846","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding" "A4A49_15516","No alias","Nicotiana attenuata","nitrate reductase [nadh] 2","protein_coding" "A4A49_27911","No alias","Nicotiana attenuata","nitrate reductase [nadh] 2","protein_coding" "A4A49_34600","No alias","Nicotiana attenuata","sulfite oxidase","protein_coding" "AC183315.4_FG006","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "AC184050.2_FG004","No alias","Zea mays","Function unknown","protein_coding" "AC197667.3_FG002","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "AC198233.4_FG008","No alias","Zea mays","Function unknown","protein_coding" "AC207628.4_FG009","No alias","Zea mays","DNAse I-like superfamily protein","protein_coding" "AC209208.3_FG002","No alias","Zea mays","plasma membrane intrinsic protein 1;4","protein_coding" "AC233870.1_FG004","No alias","Zea mays","Tudor/PWWP/MBT superfamily protein","protein_coding" "AC233879.1_FG002","No alias","Zea mays","Stress induced protein","protein_coding" "At1g01790","No alias","Arabidopsis thaliana","K(+) efflux antiporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTZ7]","protein_coding" "At1g02500","No alias","Arabidopsis thaliana","S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178WES1]","protein_coding" "At1g04350","No alias","Arabidopsis thaliana","1-aminocyclopropane-1-carboxylate oxidase homolog 6 [Source:UniProtKB/Swiss-Prot;Acc:P93824]","protein_coding" "At1g05030","No alias","Arabidopsis thaliana","Probable plastidic glucose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVE9]","protein_coding" "At1g07010","No alias","Arabidopsis thaliana","Calcineurin-like metallo-phosphoesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HNW0]","protein_coding" "At1g12520","No alias","Arabidopsis thaliana","Copper chaperone for superoxide dismutase, chloroplastic/cytosolic [Source:UniProtKB/Swiss-Prot;Acc:Q9LD47]","protein_coding" "At1g15410","No alias","Arabidopsis thaliana","Aspartate-glutamate racemase family [Source:UniProtKB/TrEMBL;Acc:Q9XI28]","protein_coding" "At1g16720","No alias","Arabidopsis thaliana","high chlorophyll fluorescence phenotype 173 [Source:TAIR;Acc:AT1G16720]","protein_coding" "At1g21060","No alias","Arabidopsis thaliana","Protein of unknown function, DUF547 [Source:TAIR;Acc:AT1G21060]","protein_coding" "At1g22930","No alias","Arabidopsis thaliana","T-complex protein 11 [Source:UniProtKB/TrEMBL;Acc:O23129]","protein_coding" "At1g23040","No alias","Arabidopsis thaliana","At1g23040 [Source:UniProtKB/TrEMBL;Acc:O23120]","protein_coding" "At1g23310","No alias","Arabidopsis thaliana","Glutamate--glyoxylate aminotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR30]","protein_coding" "At1g25570","No alias","Arabidopsis thaliana","Di-glucose binding protein with Leucine-rich repeat domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4ICJ5]","protein_coding" "At1g26220","No alias","Arabidopsis thaliana","Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C666]","protein_coding" "At1g28010","No alias","Arabidopsis thaliana","ABC transporter B family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F2]","protein_coding" "At1g29550","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P6]","protein_coding" "At1g29720","No alias","Arabidopsis thaliana","Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]","protein_coding" "At1g31190","No alias","Arabidopsis thaliana","Phosphatase IMPL1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94F00]","protein_coding" "At1g31300","No alias","Arabidopsis thaliana","At1g31300/T19E23_12 [Source:UniProtKB/TrEMBL;Acc:Q93Z82]","protein_coding" "At1g31420","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9D5]","protein_coding" "At1g32520","No alias","Arabidopsis thaliana","TLDc domain protein [Source:UniProtKB/TrEMBL;Acc:Q682Q6]","protein_coding" "At1g33110","No alias","Arabidopsis thaliana","Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WPH4]","protein_coding" "At1g33240","No alias","Arabidopsis thaliana","GT-2-like 1 [Source:TAIR;Acc:AT1G33240]","protein_coding" "At1g35460","No alias","Arabidopsis thaliana","Transcription factor bHLH80 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P8]","protein_coding" "At1g37130","No alias","Arabidopsis thaliana","Nitrate reductase [NADH] 2 [Source:UniProtKB/Swiss-Prot;Acc:P11035]","protein_coding" "At1g42550","No alias","Arabidopsis thaliana","Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]","protein_coding" "At1g50290","No alias","Arabidopsis thaliana","At1g50290/F14I3_12 [Source:UniProtKB/TrEMBL;Acc:Q944R3]","protein_coding" "At1g52870","No alias","Arabidopsis thaliana","At1g52870/F14G24_14 [Source:UniProtKB/TrEMBL;Acc:Q9C933]","protein_coding" "At1g60430","No alias","Arabidopsis thaliana","Actin-related protein 2/3 complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECJ7]","protein_coding" "At1g64720","No alias","Arabidopsis thaliana","Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIR9]","protein_coding" "At1g64740","No alias","Arabidopsis thaliana","Tubulin alpha-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P11139]","protein_coding" "At1g65020","No alias","Arabidopsis thaliana","At1g65020 [Source:UniProtKB/TrEMBL;Acc:Q5XF12]","protein_coding" "At1g69530","No alias","Arabidopsis thaliana","AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]","protein_coding" "At1g69620","No alias","Arabidopsis thaliana","60S ribosomal protein L34-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE65]","protein_coding" "At1g70370","No alias","Arabidopsis thaliana","Polygalacturonase 1 beta-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P92990]","protein_coding" "At1g70410","No alias","Arabidopsis thaliana","Beta carbonic anhydrase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CE4]","protein_coding" "At1g73110","No alias","Arabidopsis thaliana","At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]","protein_coding" "At1g75660","No alias","Arabidopsis thaliana","5'-3' exoribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FQ03]","protein_coding" "At1g76990","No alias","Arabidopsis thaliana","ACR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W888]","protein_coding" "At1g77760","No alias","Arabidopsis thaliana","Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]","protein_coding" "At1g78510","No alias","Arabidopsis thaliana","Solanesyl diphosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S948]","protein_coding" "At1g80360","No alias","Arabidopsis thaliana","Aromatic aminotransferase ISS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C969]","protein_coding" "At2g04039","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 /.../hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). [Source:TAIR;Acc:AT2G04039]","protein_coding" "At2g04790","No alias","Arabidopsis thaliana","unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT2G04790]","protein_coding" "At2g05790","No alias","Arabidopsis thaliana","O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]","protein_coding" "At2g06850","No alias","Arabidopsis thaliana","Xyloglucan endotransglucosylase/hydrolase protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39099]","protein_coding" "At2g19650","No alias","Arabidopsis thaliana","Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUM8]","protein_coding" "At2g21210","No alias","Arabidopsis thaliana","SAUR-like auxin-responsive protein family [Source:TAIR;Acc:AT2G21210]","protein_coding" "At2g26080","No alias","Arabidopsis thaliana","Glycine dehydrogenase (decarboxylating) 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80988]","protein_coding" "At2g26980","No alias","Arabidopsis thaliana","Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F4IVM7]","protein_coding" "At2g27510","No alias","Arabidopsis thaliana","Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]","protein_coding" "At2g29340","No alias","Arabidopsis thaliana","Tropinone reductase homolog At2g29340 [Source:UniProtKB/Swiss-Prot;Acc:F4IKM1]","protein_coding" "At2g29720","No alias","Arabidopsis thaliana","FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:O82384]","protein_coding" "At2g31160","No alias","Arabidopsis thaliana","Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Source:UniProtKB/Swiss-Prot;Acc:O82268]","protein_coding" "At2g34560","No alias","Arabidopsis thaliana","AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]","protein_coding" "At2g35490","No alias","Arabidopsis thaliana","Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]","protein_coding" "At2g40890","No alias","Arabidopsis thaliana","Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]","protein_coding" "At2g42490","No alias","Arabidopsis thaliana","Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]","protein_coding" "At2g43750","No alias","Arabidopsis thaliana","Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]","protein_coding" "At2g46250","No alias","Arabidopsis thaliana","At2g46250/T3F17.10 [Source:UniProtKB/TrEMBL;Acc:O82344]","protein_coding" "At3g01910","No alias","Arabidopsis thaliana","Sulfite oxidase [Source:UniProtKB/TrEMBL;Acc:Q0WWA1]","protein_coding" "At3g02730","No alias","Arabidopsis thaliana","TRXF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBJ7]","protein_coding" "At3g04940","No alias","Arabidopsis thaliana","Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]","protein_coding" "At3g06760","No alias","Arabidopsis thaliana","Drought-responsive family protein [Source:UniProtKB/TrEMBL;Acc:F4JC45]","protein_coding" "At3g15070","No alias","Arabidopsis thaliana","AT3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]","protein_coding" "At3g16560","No alias","Arabidopsis thaliana","Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]","protein_coding" "At3g17470","No alias","Arabidopsis thaliana","Ca2+-activated RelA/spot-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR76]","protein_coding" "At3g19030","No alias","Arabidopsis thaliana","AT3g19030/K13E13_15 [Source:UniProtKB/TrEMBL;Acc:Q9LJ63]","protein_coding" "At3g23200","No alias","Arabidopsis thaliana","CASP-like protein 5B3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7R5]","protein_coding" "At3g23590","No alias","Arabidopsis thaliana","Mediator of RNA polymerase II transcription subunit 33A [Source:UniProtKB/Swiss-Prot;Acc:Q9LUG9]","protein_coding" "At3g26070","No alias","Arabidopsis thaliana","Probable plastid-lipid-associated protein 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU85]","protein_coding" "At3g26085","No alias","Arabidopsis thaliana","CAAX amino terminal protease family protein [Source:UniProtKB/TrEMBL;Acc:A8MRZ2]","protein_coding" "At3g28080","No alias","Arabidopsis thaliana","WAT1-related protein At3g28080 [Source:UniProtKB/Swiss-Prot;Acc:F4IYZ0]","protein_coding" "At3g44720","No alias","Arabidopsis thaliana","Arogenate dehydratase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22241]","protein_coding" "At3g52360","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FT46]","protein_coding" "At3g56200","No alias","Arabidopsis thaliana","Amino acid transporter AVT6C [Source:UniProtKB/Swiss-Prot;Acc:Q9LYM2]","protein_coding" "At3g56240","No alias","Arabidopsis thaliana","Copper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]","protein_coding" "At3g57530","No alias","Arabidopsis thaliana","Calcium-dependent protein kinase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q6NLQ6]","protein_coding" "At3g60030","No alias","Arabidopsis thaliana","Uncharacterized protein At3g60030 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVF5]","protein_coding" "At3g61440","No alias","Arabidopsis thaliana","Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]","protein_coding" "At4g04955","No alias","Arabidopsis thaliana","Allantoinase [Source:UniProtKB/Swiss-Prot;Acc:Q94AP0]","protein_coding" "At4g05110","No alias","Arabidopsis thaliana","equilibrative nucleoside transporter 6 [Source:TAIR;Acc:AT4G05110]","protein_coding" "At4g08230","No alias","Arabidopsis thaliana","Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]","protein_coding" "At4g11090","No alias","Arabidopsis thaliana","Protein trichome birefringence-like 23 [Source:UniProtKB/Swiss-Prot;Acc:O82509]","protein_coding" "At4g12390","No alias","Arabidopsis thaliana","Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]","protein_coding" "At4g15470","No alias","Arabidopsis thaliana","BI1-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94A20]","protein_coding" "At4g17350","No alias","Arabidopsis thaliana","At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]","protein_coding" "At4g22570","No alias","Arabidopsis thaliana","Adenine phosphoribosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUW2]","protein_coding" "At4g25700","No alias","Arabidopsis thaliana","Beta-carotene 3-hydroxylase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZZ8]","protein_coding" "At4g27030","No alias","Arabidopsis thaliana","FADA [Source:UniProtKB/TrEMBL;Acc:A0A178UUY9]","protein_coding" "At4g30210","No alias","Arabidopsis thaliana","P450 reductase 2 [Source:TAIR;Acc:AT4G30210]","protein_coding" "At4g30610","No alias","Arabidopsis thaliana","Serine carboxypeptidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9M099]","protein_coding" "At4g32270","No alias","Arabidopsis thaliana","Ubiquitin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYB5]","protein_coding" "At4g32570","No alias","Arabidopsis thaliana","Protein TIFY 8 [Source:UniProtKB/Swiss-Prot;Acc:Q84MB2]","protein_coding" "At4g37560","No alias","Arabidopsis thaliana","Acetamidase/Formamidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8H1G4]","protein_coding" "At4g38970","No alias","Arabidopsis thaliana","Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]","protein_coding" "At5g03380","No alias","Arabidopsis thaliana","Heavy metal-associated isoprenylated plant protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF1]","protein_coding" "At5g03555","No alias","Arabidopsis thaliana","Purine-uracil permease NCS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZD0]","protein_coding" "At5g04140","No alias","Arabidopsis thaliana","glutamate synthase 1 [Source:TAIR;Acc:AT5G04140]","protein_coding" "At5g05790","No alias","Arabidopsis thaliana","At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9]","protein_coding" "At5g05860","No alias","Arabidopsis thaliana","Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNB5]","protein_coding" "At5g06530","No alias","Arabidopsis thaliana","ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]","protein_coding" "At5g10030","No alias","Arabidopsis thaliana","At5g10030 [Source:UniProtKB/TrEMBL;Acc:Q24JJ3]","protein_coding" "At5g13510","No alias","Arabidopsis thaliana","50S ribosomal protein L10, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FY50]","protein_coding" "At5g14430","No alias","Arabidopsis thaliana","Probable methyltransferase PMT9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZV7]","protein_coding" "At5g14740","No alias","Arabidopsis thaliana","Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]","protein_coding" "At5g16540","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 57 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7N8]","protein_coding" "At5g17230","No alias","Arabidopsis thaliana","PHYTOENE SYNTHASE [Source:UniProtKB/TrEMBL;Acc:F4KGX7]","protein_coding" "At5g26940","No alias","Arabidopsis thaliana","Exonuclease DPD1, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q682U6]","protein_coding" "At5g39080","No alias","Arabidopsis thaliana","Acyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FID2]","protein_coding" "At5g40890","No alias","Arabidopsis thaliana","Chloride channel protein CLC-a [Source:UniProtKB/Swiss-Prot;Acc:P92941]","protein_coding" "At5g46780","No alias","Arabidopsis thaliana","At5g46780 [Source:UniProtKB/TrEMBL;Acc:Q9FIP7]","protein_coding" "At5g47540","No alias","Arabidopsis thaliana","At5g47540 [Source:UniProtKB/TrEMBL;Acc:B3LFB8]","protein_coding" "At5g47770","No alias","Arabidopsis thaliana","Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]","protein_coding" "At5g48485","No alias","Arabidopsis thaliana","Putative lipid-transfer protein DIR1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W453]","protein_coding" "At5g49720","No alias","Arabidopsis thaliana","Endoglucanase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38890]","protein_coding" "At5g49970","No alias","Arabidopsis thaliana","Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX3]","protein_coding" "At5g51460","No alias","Arabidopsis thaliana","Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]","protein_coding" "At5g53370","No alias","Arabidopsis thaliana","pectin methylesterase PCR fragment F [Source:TAIR;Acc:AT5G53370]","protein_coding" "At5g53900","No alias","Arabidopsis thaliana","Gb [Source:UniProtKB/TrEMBL;Acc:Q9FN36]","protein_coding" "At5g56290","No alias","Arabidopsis thaliana","Peroxisome biogenesis protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA3]","protein_coding" "At5g56860","No alias","Arabidopsis thaliana","GATA transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ36]","protein_coding" "At5g57960","No alias","Arabidopsis thaliana","GTP binding protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FJM0]","protein_coding" "At5g58110","No alias","Arabidopsis thaliana","AT5g58110/k21l19_90 [Source:UniProtKB/TrEMBL;Acc:Q9FGT3]","protein_coding" "At5g58120","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9FGT2]","protein_coding" "At5g59750","No alias","Arabidopsis thaliana","Monofunctional riboflavin biosynthesis protein RIBA 3 [Source:UniProtKB/TrEMBL;Acc:F4KJA1]","protein_coding" "At5g65010","No alias","Arabidopsis thaliana","asparagine synthetase 2 [Source:TAIR;Acc:AT5G65010]","protein_coding" "At5g65730","No alias","Arabidopsis thaliana","Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WUU2]","protein_coding" "At5g66920","No alias","Arabidopsis thaliana","Sks17 [Source:UniProtKB/TrEMBL;Acc:A0A178UJS3]","protein_coding" "At5g67370","No alias","Arabidopsis thaliana","Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN15]","protein_coding" "At5g67420","No alias","Arabidopsis thaliana","LOB domain-containing protein 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN11]","protein_coding" "Bradi1g00940","No alias","Brachypodium distachyon","PGR5-LIKE A","protein_coding" "Bradi1g01630","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "Bradi1g04890","No alias","Brachypodium distachyon","UDP-Glycosyltransferase superfamily protein","protein_coding" "Bradi1g07900","No alias","Brachypodium distachyon","Gibberellin-regulated family protein","protein_coding" "Bradi1g09760","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g09840","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi1g13980","No alias","Brachypodium distachyon","phytochrome interacting factor 3-like 5","protein_coding" "Bradi1g14050","No alias","Brachypodium distachyon","Leucine-rich repeat (LRR) family protein","protein_coding" "Bradi1g15290","No alias","Brachypodium distachyon","photosystem II light harvesting complex gene 2.3","protein_coding" "Bradi1g19220","No alias","Brachypodium distachyon","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding" "Bradi1g21600","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g23600","No alias","Brachypodium distachyon","Succinyl-CoA ligase, alpha subunit","protein_coding" "Bradi1g24930","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g26190","No alias","Brachypodium distachyon","HSP20-like chaperones superfamily protein","protein_coding" "Bradi1g34842","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi1g37540","No alias","Brachypodium distachyon","basic helix-loop-helix (bHLH) DNA-binding family protein","protein_coding" "Bradi1g38090","No alias","Brachypodium distachyon","Protein of unknown function (DUF1677)","protein_coding" "Bradi1g38525","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g42375","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g42830","No alias","Brachypodium distachyon","Eukaryotic aspartyl protease family protein","protein_coding" "Bradi1g44020","No alias","Brachypodium distachyon","3-ketoacyl-CoA synthase 6","protein_coding" "Bradi1g44030","No alias","Brachypodium distachyon","3-ketoacyl-CoA synthase 6","protein_coding" "Bradi1g46224","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g51599","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding" "Bradi1g54955","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g60970","No alias","Brachypodium distachyon","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding" "Bradi1g62880","No alias","Brachypodium distachyon","Pollen Ole e 1 allergen and extensin family protein","protein_coding" "Bradi1g62910","No alias","Brachypodium distachyon","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "Bradi1g65501","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g66370","No alias","Brachypodium distachyon","histone H2A 6","protein_coding" "Bradi1g67851","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g71220","No alias","Brachypodium distachyon","heptahelical protein 4","protein_coding" "Bradi1g73026","No alias","Brachypodium distachyon","homeobox protein 34","protein_coding" "Bradi1g77680","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g77940","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding" "Bradi2g02390","No alias","Brachypodium distachyon","O-methyltransferase 1","protein_coding" "Bradi2g03090","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g03140","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding" "Bradi2g03170","No alias","Brachypodium distachyon","triosephosphate isomerase","protein_coding" "Bradi2g04645","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi2g05050","No alias","Brachypodium distachyon","indole-3-acetate beta-D-glucosyltransferase","protein_coding" "Bradi2g08100","No alias","Brachypodium distachyon","Glutaredoxin family protein","protein_coding" "Bradi2g11940","No alias","Brachypodium distachyon","senescence-associated gene 21","protein_coding" "Bradi2g12400","No alias","Brachypodium distachyon","Pectin lyase-like superfamily protein","protein_coding" "Bradi2g15590","No alias","Brachypodium distachyon","Protein of unknown function, DUF617","protein_coding" "Bradi2g16290","No alias","Brachypodium distachyon","photosystem II light harvesting complex gene B1B2","protein_coding" "Bradi2g17054","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g17830","No alias","Brachypodium distachyon","mitogen-activated protein kinase kinase kinase 17","protein_coding" "Bradi2g18920","No alias","Brachypodium distachyon","Pollen Ole e 1 allergen and extensin family protein","protein_coding" "Bradi2g20390","No alias","Brachypodium distachyon","Ribosomal protein S19 family protein","protein_coding" "Bradi2g22227","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding" "Bradi2g27263","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g27970","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding" "Bradi2g30490","No alias","Brachypodium distachyon","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding" "Bradi2g32900","No alias","Brachypodium distachyon","light-regulated zinc finger protein 1","protein_coding" "Bradi2g32906","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g33925","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g36850","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding" "Bradi2g38750","No alias","Brachypodium distachyon","outer plastid envelope protein 16-1","protein_coding" "Bradi2g39339","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF868)","protein_coding" "Bradi2g42426","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding" "Bradi2g45983","No alias","Brachypodium distachyon","RNA-directed DNA polymerase (reverse transcriptase)-related family protein","protein_coding" "Bradi2g49226","No alias","Brachypodium distachyon","Cysteine proteinases superfamily protein","protein_coding" "Bradi2g57562","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g58930","No alias","Brachypodium distachyon","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding" "Bradi2g61247","No alias","Brachypodium distachyon","Leucine-rich receptor-like protein kinase family protein","protein_coding" "Bradi2g62520","No alias","Brachypodium distachyon","tonoplast intrinsic protein 1;3","protein_coding" "Bradi3g05283","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g06472","No alias","Brachypodium distachyon","myb domain protein 70","protein_coding" "Bradi3g07810","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g08220","No alias","Brachypodium distachyon","cytokinin oxidase 2","protein_coding" "Bradi3g08721","No alias","Brachypodium distachyon","F-box and associated interaction domains-containing protein","protein_coding" "Bradi3g09380","No alias","Brachypodium distachyon","FAD-binding Berberine family protein","protein_coding" "Bradi3g10595","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g11011","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g13715","No alias","Brachypodium distachyon","D-arabinono-1,4-lactone oxidase family protein","protein_coding" "Bradi3g14490","No alias","Brachypodium distachyon","tryptophan synthase beta-subunit 2","protein_coding" "Bradi3g14888","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g14976","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g18730","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g19405","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g20180","No alias","Brachypodium distachyon","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "Bradi3g23078","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g24760","No alias","Brachypodium distachyon","phytochrome kinase substrate-related","protein_coding" "Bradi3g33170","No alias","Brachypodium distachyon","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Bradi3g36760","No alias","Brachypodium distachyon","light-harvesting chlorophyll-protein complex I subunit A4","protein_coding" "Bradi3g37041","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g37940","No alias","Brachypodium distachyon","nitrate reductase 1","protein_coding" "Bradi3g39177","No alias","Brachypodium distachyon","AGAMOUS-like 66","protein_coding" "Bradi3g39722","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g40030","No alias","Brachypodium distachyon","squamosa promoter binding protein-like 9","protein_coding" "Bradi3g41140","No alias","Brachypodium distachyon","Nucleotide-diphospho-sugar transferase family protein","protein_coding" "Bradi3g41170","No alias","Brachypodium distachyon","sulfite oxidase","protein_coding" "Bradi3g42580","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi3g44370","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi3g45840","No alias","Brachypodium distachyon","proline-rich family protein","protein_coding" "Bradi3g46480","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding" "Bradi3g48180","No alias","Brachypodium distachyon","salt tolerance homologue","protein_coding" "Bradi3g48795","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g49360","No alias","Brachypodium distachyon","plasma membrane intrinsic protein 2","protein_coding" "Bradi3g49380","No alias","Brachypodium distachyon","low-molecular-weight cysteine-rich 69","protein_coding" "Bradi3g52020","No alias","Brachypodium distachyon","Protein of unknown function (DUF581)","protein_coding" "Bradi3g52096","No alias","Brachypodium distachyon","nitrate transporter 1.5","protein_coding" "Bradi3g53370","No alias","Brachypodium distachyon","fatty acid desaturase 2","protein_coding" "Bradi3g54000","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi3g55405","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g55890","No alias","Brachypodium distachyon","O-methyltransferase family protein","protein_coding" "Bradi3g55912","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g57010","No alias","Brachypodium distachyon","plantacyanin","protein_coding" "Bradi3g57680","No alias","Brachypodium distachyon","nitrate reductase 1","protein_coding" "Bradi3g58560","No alias","Brachypodium distachyon","uclacyanin 1","protein_coding" "Bradi4g03393","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g05180","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g05260","No alias","Brachypodium distachyon","uclacyanin 1","protein_coding" "Bradi4g05415","No alias","Brachypodium distachyon","4-coumarate:CoA ligase 1","protein_coding" "Bradi4g07847","No alias","Brachypodium distachyon","beta-fructofuranosidase 5","protein_coding" "Bradi4g09120","No alias","Brachypodium distachyon","rubisco activase","protein_coding" "Bradi4g10373","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g10397","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi4g10650","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g11010","No alias","Brachypodium distachyon","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "Bradi4g11420","No alias","Brachypodium distachyon","Uncharacterised protein family (UPF0497)","protein_coding" "Bradi4g14630","No alias","Brachypodium distachyon","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding" "Bradi4g16930","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF247)","protein_coding" "Bradi4g17670","No alias","Brachypodium distachyon","Beta-1,3-N-Acetylglucosaminyltransferase family protein","protein_coding" "Bradi4g18307","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi4g21170","No alias","Brachypodium distachyon","light harvesting complex of photosystem II 5","protein_coding" "Bradi4g21615","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g24990","No alias","Brachypodium distachyon","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Bradi4g25151","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g25900","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding" "Bradi4g26176","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g27680","No alias","Brachypodium distachyon","Peroxidase superfamily protein","protein_coding" "Bradi4g28340","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g29282","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g30600","No alias","Brachypodium distachyon","monogalactosyl diacylglycerol synthase 1","protein_coding" "Bradi4g31140","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g32120","No alias","Brachypodium distachyon","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding" "Bradi4g33899","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi4g35296","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g36267","No alias","Brachypodium distachyon","late embryogenesis abundant protein-related / LEA protein-related","protein_coding" "Bradi4g37780","No alias","Brachypodium distachyon","IBR domain-containing protein","protein_coding" "Bradi4g40270","No alias","Brachypodium distachyon","homeobox protein 33","protein_coding" "Bradi4g40473","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g43481","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g43920","No alias","Brachypodium distachyon","Glyceraldehyde-3-phosphate dehydrogenase-like family protein","protein_coding" "Bradi4g44496","No alias","Brachypodium distachyon","BURP domain-containing protein","protein_coding" "Bradi5g00750","No alias","Brachypodium distachyon","HXXXD-type acyl-transferase family protein","protein_coding" "Bradi5g02231","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g03065","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g06485","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g08950","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g10960","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g12050","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding" "Bradi5g14905","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g15970","No alias","Brachypodium distachyon","plasma membrane intrinsic protein 2","protein_coding" "Bradi5g17200","No alias","Brachypodium distachyon","Protein of unknown function, DUF584","protein_coding" "Bradi5g18980","No alias","Brachypodium distachyon","C4-dicarboxylate transporter/malic acid transport protein","protein_coding" "Bradi5g24200","No alias","Brachypodium distachyon","Peroxidase superfamily protein","protein_coding" "Bradi5g24480","No alias","Brachypodium distachyon","S-locus lectin protein kinase family protein","protein_coding" "Bradi5g26835","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g27602","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Cre01.g008200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g050150","No alias","Chlamydomonas reinhardtii","FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre02.g095037","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g095085","No alias","Chlamydomonas reinhardtii","Sodium Bile acid symporter family","protein_coding" "Cre02.g095118","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g142486","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g143247","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g150200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g167101","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g167351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g188026","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g198212","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g203625","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g204353","No alias","Chlamydomonas reinhardtii","GTP-binding protein 1","protein_coding" "Cre04.g214505","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g217929","No alias","Chlamydomonas reinhardtii","sulfite oxidase","protein_coding" "Cre05.g234400","No alias","Chlamydomonas reinhardtii","ABC transporter family protein","protein_coding" "Cre06.g250400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g257550","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding" "Cre06.g262550","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 16","protein_coding" "Cre06.g271526","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g278093","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding" "Cre06.g278291","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g336200","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 12","protein_coding" "Cre08.g378150","No alias","Chlamydomonas reinhardtii","glucose-6-phosphate dehydrogenase 2","protein_coding" "Cre09.g390850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g399909","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g399923","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g409700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g410950","No alias","Chlamydomonas reinhardtii","nitrate reductase 2","protein_coding" "Cre10.g417675","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g501351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g517250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g540550","No alias","Chlamydomonas reinhardtii","soluble epoxide hydrolase","protein_coding" "Cre12.g555850","No alias","Chlamydomonas reinhardtii","PPPDE putative thiol peptidase family protein","protein_coding" "Cre13.g577026","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g588026","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre15.g643389","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g656466","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g733425","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre18.g749897","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre23.g754297","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre27.g757347","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre28.g757647","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "evm.model.contig_2015.1","No alias","Porphyridium purpureum","(at2g46210 : 107.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2020.34","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2021.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2022.12","No alias","Porphyridium purpureum","(at3g45890 : 151.0) Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.; ROOT UVB SENSITIVE 1 (RUS1); INVOLVED IN: response to UV-B, developmental process; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: lateral root, root apical meristem, callus, elongation zone, embryonic root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT1G13770.1); Has 458 Blast hits to 456 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 116; Fungi - 71; Plants - 198; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)","protein_coding" "evm.model.contig_2024.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2030.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2031.2","No alias","Porphyridium purpureum","(at1g18360 : 83.6) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 6456 Blast hits to 6448 proteins in 1759 species: Archae - 38; Bacteria - 4736; Metazoa - 147; Fungi - 149; Plants - 444; Viruses - 63; Other Eukaryotes - 879 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description)","protein_coding" "evm.model.contig_2033.16","No alias","Porphyridium purpureum","(at4g36400 : 461.0) Encodes a (D)-2-hydroxyglutarate dehydrogenase.; FAD-linked oxidases family protein; FUNCTIONS IN: electron carrier activity, (R)-2-hydroxyglutarate dehydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT5G06580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)","protein_coding" "evm.model.contig_2034.12","No alias","Porphyridium purpureum","(at5g26360 : 620.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p54411|tcpe2_avesa : 278.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1240.0) & (original description: no original description)","protein_coding" "evm.model.contig_2036.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2044.16","No alias","Porphyridium purpureum","(q9sbn4|pgkh_volca : 349.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 335.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "evm.model.contig_2044.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2046.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2048.1","No alias","Porphyridium purpureum","(at4g02930 : 543.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (q9mup0|eftu_mesvi : 493.0) Elongation factor Tu (EF-Tu) - Mesostigma viride & (reliability: 1086.0) & (original description: no original description)","protein_coding" "evm.model.contig_2050.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2051.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2051.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2052.5","No alias","Porphyridium purpureum","(at4g24400 : 128.0) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.; CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132609 Blast hits to 130467 proteins in 4740 species: Archae - 192; Bacteria - 15427; Metazoa - 49318; Fungi - 12831; Plants - 32044; Viruses - 538; Other Eukaryotes - 22259 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 122.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 256.0) & (original description: no original description)","protein_coding" "evm.model.contig_2056.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2057.6","No alias","Porphyridium purpureum","(at1g03000 : 327.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (q96372|cdc48_capan : 258.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 654.0) & (original description: no original description)","protein_coding" "evm.model.contig_2059.36","No alias","Porphyridium purpureum","(at4g11150 : 157.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o23948|vate_goshi : 151.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.contig_2073.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2073.3","No alias","Porphyridium purpureum","(at5g14600 : 179.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: tRNA (adenine-N1-)-methyltransferase activity; INVOLVED IN: tRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: tRNA methyltransferase complex GCD14 subunit (InterPro:IPR014816); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description)","protein_coding" "evm.model.contig_2075.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2084.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2084.9","No alias","Porphyridium purpureum","(at3g18140 : 115.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)","protein_coding" "evm.model.contig_2090.27","No alias","Porphyridium purpureum","(at5g03290 : 442.0) Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase V (IDH-V); FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity, zinc ion binding, ATP binding; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29696|leu3_soltu : 406.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 884.0) & (original description: no original description)","protein_coding" "evm.model.contig_2096.15","No alias","Porphyridium purpureum","(at1g36050 : 288.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 576.0) & (original description: no original description)","protein_coding" "evm.model.contig_2102.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2105.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2110.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2112.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2113.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2116.4","No alias","Porphyridium purpureum","(p27968|nia7_horvu : 516.0) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) - Hordeum vulgare (Barley) & (at1g77760 : 499.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 998.0) & (original description: no original description)","protein_coding" "evm.model.contig_2122.21","No alias","Porphyridium purpureum","(at1g13820 : 172.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G39220.1); Has 7432 Blast hits to 7419 proteins in 1219 species: Archae - 99; Bacteria - 5035; Metazoa - 262; Fungi - 72; Plants - 574; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)","protein_coding" "evm.model.contig_2123.8","No alias","Porphyridium purpureum","(at2g14050 : 358.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 157.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 716.0) & (original description: no original description)","protein_coding" "evm.model.contig_2126.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2130.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2132.7","No alias","Porphyridium purpureum","(at2g35660 : 91.3) Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.; CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description)","protein_coding" "evm.model.contig_2141.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2141.5","No alias","Porphyridium purpureum","(at3g53110 : 322.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (q41741|if4a_maize : 271.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (gnl|cdd|68872 : 82.8) no description available & (reliability: 644.0) & (original description: no original description)","protein_coding" "evm.model.contig_2142.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2146.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2146.2","No alias","Porphyridium purpureum","(at3g13050 : 127.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter4 (TAIR:AT3G20660.1); Has 38439 Blast hits to 37687 proteins in 2363 species: Archae - 738; Bacteria - 22281; Metazoa - 5017; Fungi - 6515; Plants - 2234; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)","protein_coding" "evm.model.contig_2146.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2149.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2150.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2156.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2165.4","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2174.1","No alias","Porphyridium purpureum","(p41918|rana1_tobac : 303.0) GTP-binding nuclear protein Ran-A1 - Nicotiana tabacum (Common tobacco) & (at5g20010 : 300.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAS-related nuclear protein-1 (RAN-1); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, response to salt stress, protein import into nucleus; LOCATED IN: apoplast, cell wall, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAN GTPase 3 (TAIR:AT5G55190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)","protein_coding" "evm.model.contig_2183.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2190.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2190.2","No alias","Porphyridium purpureum","(p16081|nia1_orysa : 776.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (at1g77760 : 752.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1504.0) & (original description: no original description)","protein_coding" "evm.model.contig_2197.1","No alias","Porphyridium purpureum","(at1g31770 : 177.0) ATP-binding cassette 14 (ABCG14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 394116 Blast hits to 359785 proteins in 4146 species: Archae - 7090; Bacteria - 311308; Metazoa - 8766; Fungi - 6614; Plants - 5656; Viruses - 7; Other Eukaryotes - 54675 (source: NCBI BLink). & (q8gu86|pdr5_orysa : 122.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.contig_2221.1","No alias","Porphyridium purpureum","(at3g26570 : 99.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)","protein_coding" "evm.model.contig_2227.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2255.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2262.8","No alias","Porphyridium purpureum","(at2g37860 : 163.0) Encodes a protein of unknown function. Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae; LOWER CELL DENSITY 1 (LCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: leaf development; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)","protein_coding" "evm.model.contig_2273.24","No alias","Porphyridium purpureum","(at3g03920 : 89.7) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description)","protein_coding" "evm.model.contig_2285.8","No alias","Porphyridium purpureum","(p00074|cyc_ginbi : 153.0) Cytochrome c - Ginkgo biloba (Ginkgo) & (at1g22840 : 146.0) Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.; CYTOCHROME C-1 (CYTC-1); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: cell proliferation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: cytochrome c-2 (TAIR:AT4G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "evm.model.contig_2286.13","No alias","Porphyridium purpureum","(at2g31955 : 358.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (reliability: 716.0) & (original description: no original description)","protein_coding" "evm.model.contig_2296.2","No alias","Porphyridium purpureum","(at3g44340 : 270.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)","protein_coding" "evm.model.contig_2305.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2306.3","No alias","Porphyridium purpureum","(p46225|tpic_secce : 302.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 281.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "evm.model.contig_2324.1","No alias","Porphyridium purpureum","(p16081|nia1_orysa : 792.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (at1g77760 : 763.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1526.0) & (original description: no original description)","protein_coding" "evm.model.contig_2333.1","No alias","Porphyridium purpureum","(at1g64780 : 255.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 510.0) & (original description: no original description)","protein_coding" "evm.model.contig_2340.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2347.7","No alias","Porphyridium purpureum","(at4g11160 : 330.0) Translation initiation factor 2, small GTP-binding protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT1G17220.1); Has 56805 Blast hits to 56771 proteins in 4188 species: Archae - 1161; Bacteria - 37207; Metazoa - 1733; Fungi - 1367; Plants - 871; Viruses - 1; Other Eukaryotes - 14465 (source: NCBI BLink). & (p57997|if2c_phavu : 298.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 660.0) & (original description: no original description)","protein_coding" "evm.model.contig_2358.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2361.1","No alias","Porphyridium purpureum","(at2g29940 : 539.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5w274|pdr3_tobac : 525.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1078.0) & (original description: no original description)","protein_coding" "evm.model.contig_2421.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2452.1","No alias","Porphyridium purpureum","(at4g35140 : 85.9) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)","protein_coding" "evm.model.contig_2499.3","No alias","Porphyridium purpureum","(at2g31190 : 178.0) Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.; ROOT UV-B SENSITIVE 2 (RUS2); INVOLVED IN: response to UV-B, auxin polar transport; LOCATED IN: mitochondrion, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1). & (reliability: 356.0) & (original description: no original description)","protein_coding" "evm.model.contig_2504.8","No alias","Porphyridium purpureum","(at4g01100 : 137.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (p29518|bt1_maize : 102.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.contig_2566.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2623.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2684.1","No alias","Porphyridium purpureum","(at3g45060 : 135.0) member of High affinity nitrate transporter family; high affinity nitrate transporter 2.6 (NRT2.6); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: response to karrikin; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.3 (TAIR:AT5G60780.1); Has 6705 Blast hits to 6593 proteins in 1499 species: Archae - 65; Bacteria - 5860; Metazoa - 18; Fungi - 311; Plants - 270; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)","protein_coding" "evm.model.contig_29.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3383.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3384.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3384.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3385.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3391.6","No alias","Porphyridium purpureum","(at2g40840 : 448.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 86.7) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 896.0) & (original description: no original description)","protein_coding" "evm.model.contig_3394.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3394.6","No alias","Porphyridium purpureum","(at1g18480 : 140.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G07010.1); Has 638 Blast hits to 634 proteins in 194 species: Archae - 15; Bacteria - 274; Metazoa - 0; Fungi - 21; Plants - 102; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.contig_3396.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3397.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3397.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3404.13","No alias","Porphyridium purpureum","(at5g51970 : 306.0) Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.; GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p14673|adh1_soltu : 100.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Solanum tuberosum (Potato) & (reliability: 612.0) & (original description: no original description)","protein_coding" "evm.model.contig_3415.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3420.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3423.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3426.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3428.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3435.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3441.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3443.11","No alias","Porphyridium purpureum","(at4g11120 : 101.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)","protein_coding" "evm.model.contig_3452.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3456.2","No alias","Porphyridium purpureum","(at3g15610 : 270.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)","protein_coding" "evm.model.contig_3456.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3457.1","No alias","Porphyridium purpureum","(at3g04820 : 173.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, TruD (InterPro:IPR001656), Pseudouridine synthase TruD, eukaryotic (InterPro:IPR017091), Pseudouridine synthase, TruD, insertion domain (InterPro:IPR011760); Has 2276 Blast hits to 2198 proteins in 933 species: Archae - 260; Bacteria - 1262; Metazoa - 203; Fungi - 153; Plants - 61; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description)","protein_coding" "evm.model.contig_3470.12","No alias","Porphyridium purpureum","(at5g12470 : 148.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)","protein_coding" "evm.model.contig_3471.4","No alias","Porphyridium purpureum","(at4g35460 : 392.0) NADPH-dependent thioredoxin reductase 1 (NTR1. Similar to E.coli NTR and has conserved NADPH binding domains.; NADPH-dependent thioredoxin reductase B (NTRB); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: pollen germination, thioredoxin biosynthetic process, cell growth, seed development, cell redox homeostasis; LOCATED IN: cytosol, mitochondrion, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), Thioredoxin reductase (InterPro:IPR005982), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 22764 Blast hits to 22762 proteins in 2961 species: Archae - 698; Bacteria - 15900; Metazoa - 139; Fungi - 313; Plants - 208; Viruses - 0; Other Eukaryotes - 5506 (source: NCBI BLink). & (reliability: 784.0) & (original description: no original description)","protein_coding" "evm.model.contig_3471.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3476.10","No alias","Porphyridium purpureum","(at4g30600 : 304.0) signal recognition particle receptor alpha subunit family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; INVOLVED IN: intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle receptor, alpha subunit, N-terminal (InterPro:IPR007222), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 16825 Blast hits to 16740 proteins in 2884 species: Archae - 472; Bacteria - 10592; Metazoa - 551; Fungi - 433; Plants - 279; Viruses - 3; Other Eukaryotes - 4495 (source: NCBI BLink). & (p49969|sr542_horvu : 106.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 608.0) & (original description: no original description)","protein_coding" "evm.model.contig_3483.2","No alias","Porphyridium purpureum","(at4g09570 : 170.0) Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 4 (CPK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 132709 Blast hits to 123975 proteins in 4221 species: Archae - 161; Bacteria - 14258; Metazoa - 49454; Fungi - 17991; Plants - 27137; Viruses - 592; Other Eukaryotes - 23116 (source: NCBI BLink). & (p53684|cdpk3_orysa : 169.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (gnl|cdd|68872 : 82.8) no description available & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.contig_3484.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3488.15","No alias","Porphyridium purpureum","(at5g37830 : 1249.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2498.0) & (original description: no original description)","protein_coding" "evm.model.contig_3490.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3492.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3492.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3506.5","No alias","Porphyridium purpureum","(at5g63400 : 244.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (q08480|kad2_orysa : 240.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: no original description)","protein_coding" "evm.model.contig_3524.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3537.3","No alias","Porphyridium purpureum","(at4g39120 : 205.0) Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.; myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink). & (reliability: 410.0) & (original description: no original description)","protein_coding" "evm.model.contig_3542.2","No alias","Porphyridium purpureum","(at1g10130 : 842.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (q6atv4|aca2_orysa : 307.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 1684.0) & (original description: no original description)","protein_coding" "evm.model.contig_3564.5","No alias","Porphyridium purpureum","(at2g01770 : 165.0) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.; vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.contig_3565.3","No alias","Porphyridium purpureum","(at1g64650 : 341.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 682.0) & (original description: no original description)","protein_coding" "evm.model.contig_3577.1","No alias","Porphyridium purpureum","(at3g23510 : 290.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)","protein_coding" "evm.model.contig_3582.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3583.5","No alias","Porphyridium purpureum","(at2g13650 : 95.1) Encodes a Golgi-localized GDP-mannose transporter.; golgi nucleotide sugar transporter 1 (GONST1); FUNCTIONS IN: GDP-mannose transmembrane transporter activity, nucleotide-sugar transmembrane transporter activity; INVOLVED IN: GDP-mannose transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 2 (TAIR:AT1G07290.1). & (reliability: 172.6) & (original description: no original description)","protein_coding" "evm.model.contig_3589.1","No alias","Porphyridium purpureum","(at5g60550 : 183.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5n942|sapk4_orysa : 123.0) Serine/threonine-protein kinase SAPK4 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 4) - Oryza sativa (Rice) & (reliability: 366.0) & (original description: no original description)","protein_coding" "evm.model.contig_3604.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3633.1","No alias","Porphyridium purpureum","(at4g00680 : 93.6) actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (p30175|adf_lillo : 92.4) Actin-depolymerizing factor (ADF) - Lilium longiflorum (Trumpet lily) & (reliability: 187.2) & (original description: no original description)","protein_coding" "evm.model.contig_3646.4","No alias","Porphyridium purpureum","(at3g52050 : 146.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "evm.model.contig_3704.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3727.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3836.1","No alias","Porphyridium purpureum","(at1g64780 : 281.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "evm.model.contig_3957.2","No alias","Porphyridium purpureum","(at1g68830 : 92.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description)","protein_coding" "evm.model.contig_432.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_438.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4400.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4402.10","No alias","Porphyridium purpureum","(at1g25380 : 165.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (p29518|bt1_maize : 99.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.contig_4402.14","No alias","Porphyridium purpureum","(q6k1c4|cax3_orysa : 132.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (at3g51860 : 126.0) cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink). & (gnl|cdd|68872 : 119.0) no description available & (reliability: 252.0) & (original description: no original description)","protein_coding" "evm.model.contig_4405.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4410.18","No alias","Porphyridium purpureum","(at3g60330 : 639.0) H(+)-ATPase 7 (HA7); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 11 (TAIR:AT5G62670.1). & (q08435|pma1_nicpl : 639.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1278.0) & (original description: no original description)","protein_coding" "evm.model.contig_4411.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4415.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4419.9","No alias","Porphyridium purpureum","(p36183|enpl_horvu : 503.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (at4g24190 : 494.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 988.0) & (original description: no original description)","protein_coding" "evm.model.contig_4421.1","No alias","Porphyridium purpureum","(at4g20070 : 182.0) The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.; allantoate amidohydrolase (AAH); CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Amidase, hydantoinase/carbamoylase (InterPro:IPR010158), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: ureidoglycolate amidohydrolase (TAIR:AT5G43600.1); Has 3541 Blast hits to 3529 proteins in 962 species: Archae - 54; Bacteria - 2502; Metazoa - 32; Fungi - 158; Plants - 88; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (gnl|cdd|68872 : 81.2) no description available & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.contig_443.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4432.13","No alias","Porphyridium purpureum","(at4g32530 : 222.0) ATPase, F0/V0 complex, subunit C protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: ATP synthesis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, V0 complex, proteolipid subunit C (InterPro:IPR000245); BEST Arabidopsis thaliana protein match is: ATPase, F0/V0 complex, subunit C protein (TAIR:AT2G25610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40585|vatl_tobac : 102.0) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (reliability: 444.0) & (original description: no original description)","protein_coding" "evm.model.contig_4438.10","No alias","Porphyridium purpureum","(at1g36310 : 128.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)","protein_coding" "evm.model.contig_444.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_444.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4445.2","No alias","Porphyridium purpureum","(at4g27585 : 292.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G54100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 584.0) & (original description: no original description)","protein_coding" "evm.model.contig_4453.5","No alias","Porphyridium purpureum",""(at2g26170 : 134.0) Encodes a protein with similarity to thromboxane-A synthase, member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3,4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus, no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS, CHI, F3H, F3'H, FLS, DFR, ANS, UFGT, RT, AAC and GST).; ""cytochrome P450, family 711, subfamily A, polypeptide 1"" (CYP711A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: carotenoid biosynthetic process, positive regulation of flavonoid biosynthetic process, regulation of meristem structural organization, secondary shoot formation, auxin polar transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 33662 Blast hits to 33590 proteins in 1727 species: Archae - 52; Bacteria - 5395; Metazoa - 11559; Fungi - 6944; Plants - 8228; Viruses - 3; Other Eukaryotes - 1481 (source: NCBI BLink). & (q43078|c97b1_pea : 108.0) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 268.0) & (original description: no original description)"","protein_coding" "evm.model.contig_4462.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4477.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4479.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4505.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4551.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_458.1","No alias","Porphyridium purpureum","(at3g23600 : 86.7) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description)","protein_coding" "evm.model.contig_4594.4","No alias","Porphyridium purpureum","(o65361|p5cs_mescr : 322.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 320.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 640.0) & (original description: no original description)","protein_coding" "evm.model.contig_461.7","No alias","Porphyridium purpureum","(at3g63410 : 288.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (p23525|in37_spiol : 282.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (reliability: 576.0) & (original description: no original description)","protein_coding" "evm.model.contig_466.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4661.1","No alias","Porphyridium purpureum","(at3g26570 : 117.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)","protein_coding" "evm.model.contig_468.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_468.3","No alias","Porphyridium purpureum","(at5g66120 : 153.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "evm.model.contig_496.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_497.4","No alias","Porphyridium purpureum","(at3g57150 : 559.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (reliability: 1118.0) & (original description: no original description)","protein_coding" "evm.model.contig_504.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_504.2","No alias","Porphyridium purpureum","(at3g47120 : 102.0) RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_510.13","No alias","Porphyridium purpureum","(at1g31340 : 120.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p0c031|rub2_orysa : 120.0) NEDD8-like protein RUB2 precursor (Ubiquitin-related protein 2) (OsRUB2) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: no original description)","protein_coding" "evm.model.contig_511.1","No alias","Porphyridium purpureum","(at5g20520 : 199.0) Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).; WAVY GROWTH 2 (WAV2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: root development; LOCATED IN: organelle inner membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G13610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description)","protein_coding" "evm.model.contig_516.3","No alias","Porphyridium purpureum","(at1g67730 : 87.8) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.contig_518.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_518.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_530.3","No alias","Porphyridium purpureum","(at3g54380 : 102.0) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_542.10","No alias","Porphyridium purpureum","(at5g19820 : 684.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1368.0) & (original description: no original description)","protein_coding" "evm.model.contig_546.4","No alias","Porphyridium purpureum","(at1g22850 : 82.8) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4604 Blast hits to 4604 proteins in 1169 species: Archae - 23; Bacteria - 2889; Metazoa - 197; Fungi - 87; Plants - 283; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description)","protein_coding" "evm.model.contig_567.10","No alias","Porphyridium purpureum","(at5g14800 : 187.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (p17817|p5cr_soybn : 180.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Glycine max (Soybean) & (reliability: 374.0) & (original description: no original description)","protein_coding" "evm.model.contig_568.7","No alias","Porphyridium purpureum","(at2g35840 : 101.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (reliability: 202.0) & (original description: no original description)","protein_coding" "evm.model.contig_569.2","No alias","Porphyridium purpureum",""(at2g18040 : 124.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; ""peptidylprolyl cis/trans isomerase, NIMA-interacting 1"" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (q94g00|pin1_maldo : 122.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 248.0) & (original description: no original description)"","protein_coding" "evm.model.contig_582.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_589.1","No alias","Porphyridium purpureum","(at5g17630 : 261.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49131|tpt_flapr : 219.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Flaveria pringlei & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.contig_597.2","No alias","Porphyridium purpureum","(at3g07100 : 419.0) Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description)","protein_coding" "evm.model.contig_606.1","No alias","Porphyridium purpureum","(at3g01910 : 331.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p39866|nia2_phavu : 221.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 662.0) & (original description: no original description)","protein_coding" "evm.model.contig_606.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_610.2","No alias","Porphyridium purpureum","(at4g20980 : 304.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|68872 : 86.2) no description available & (reliability: 608.0) & (original description: no original description)","protein_coding" "evm.model.contig_611.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_611.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_621.1","No alias","Porphyridium purpureum","(at4g27420 : 138.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)","protein_coding" "evm.model.contig_636.4","No alias","Porphyridium purpureum","(at2g44040 : 259.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT3G59890.1); Has 3366 Blast hits to 3365 proteins in 1356 species: Archae - 124; Bacteria - 2714; Metazoa - 2; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description)","protein_coding" "evm.model.contig_699.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_724.8","No alias","Porphyridium purpureum","(at1g18040 : 302.0) cyclin-dependent kinase D1;3 (CDKD1;3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;1 (TAIR:AT1G73690.1); Has 119527 Blast hits to 118054 proteins in 4087 species: Archae - 74; Bacteria - 13556; Metazoa - 44153; Fungi - 12365; Plants - 29368; Viruses - 395; Other Eukaryotes - 19616 (source: NCBI BLink). & (p29620|kc47_orysa : 298.0) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: no original description)","protein_coding" "evm.model.contig_750.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_801.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_827.1","No alias","Porphyridium purpureum","(at5g16070 : 650.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G02530.1); Has 18279 Blast hits to 17892 proteins in 3676 species: Archae - 807; Bacteria - 8603; Metazoa - 2077; Fungi - 1456; Plants - 829; Viruses - 0; Other Eukaryotes - 4507 (source: NCBI BLink). & (p54411|tcpe2_avesa : 224.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1300.0) & (original description: no original description)","protein_coding" "evm.model.contig_849.3","No alias","Porphyridium purpureum","(at5g06160 : 174.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description)","protein_coding" "evm.model.contig_923.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.167","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000057.66","No alias","Cyanophora paradoxa","(at3g47730 : 380.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description)","protein_coding" "evm.model.tig00000057.67","No alias","Cyanophora paradoxa","(at3g47780 : 402.0) member of ATH subfamily; ABC2 homolog 6 (ATH6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 392088 Blast hits to 359274 proteins in 4025 species: Archae - 7301; Bacteria - 309060; Metazoa - 8340; Fungi - 5303; Plants - 5008; Viruses - 16; Other Eukaryotes - 57060 (source: NCBI BLink). & (q9mun1|cysa_mesvi : 82.0) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (reliability: 804.0) & (original description: no original description)","protein_coding" "evm.model.tig00000073.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000076.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000076.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.25","No alias","Cyanophora paradoxa","(at1g18610 : 85.5) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)","protein_coding" "evm.model.tig00000145.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.35","No alias","Cyanophora paradoxa","(at3g02260 : 114.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "evm.model.tig00000169.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000169.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000189.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000237.33","No alias","Cyanophora paradoxa","(at4g27640 : 502.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (reliability: 1004.0) & (original description: no original description)","protein_coding" "evm.model.tig00000241.108","No alias","Cyanophora paradoxa","(at1g17280 : 149.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "evm.model.tig00000241.128","No alias","Cyanophora paradoxa","(at3g45780 : 80.1) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)","protein_coding" "evm.model.tig00000241.47","No alias","Cyanophora paradoxa","(at2g42640 : 100.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Mitogen activated protein kinase kinase kinase-related (TAIR:AT3G58640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)","protein_coding" "evm.model.tig00000248.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000249.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.123","No alias","Cyanophora paradoxa","(at4g14000 : 107.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43320.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.tig00000254.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000269.120","No alias","Cyanophora paradoxa","(at1g06890 : 149.0) nodulin MtN21 /EamA-like transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT2G30460.2). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.tig00000319.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000396.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000402.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000478.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000553.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000553.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000571.4","No alias","Cyanophora paradoxa","(at1g12940 : 105.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "evm.model.tig00000605.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000640.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000718.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000741.4","No alias","Cyanophora paradoxa","(at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 375.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 864.0) & (original description: no original description)","protein_coding" "evm.model.tig00000788.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000792.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000826.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000849.27","No alias","Cyanophora paradoxa","(at5g36700 : 205.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (reliability: 410.0) & (original description: no original description)","protein_coding" "evm.model.tig00000870.6","No alias","Cyanophora paradoxa","(at5g37500 : 207.0) Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 119.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 414.0) & (original description: no original description)","protein_coding" "evm.model.tig00000882.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000889.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000900.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000944.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000980.16","No alias","Cyanophora paradoxa","(at1g07670 : 240.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qy12|aca4_orysa : 187.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (reliability: 480.0) & (original description: no original description)","protein_coding" "evm.model.tig00000981.18","No alias","Cyanophora paradoxa","(at1g18180 : 140.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G73650.3); Has 2065 Blast hits to 2065 proteins in 348 species: Archae - 0; Bacteria - 501; Metazoa - 79; Fungi - 152; Plants - 110; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.tig00001110.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001110.8","No alias","Cyanophora paradoxa","(at5g67220 : 261.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.tig00001127.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001128.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001160.14","No alias","Cyanophora paradoxa","(at5g58240 : 139.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "evm.model.tig00001177.10","No alias","Cyanophora paradoxa","(p39867|nia1_brana : 574.0) Nitrate reductase [NADH], clone PBNBR1405 (EC 1.7.1.1) (NR) - Brassica napus (Rape) & (at1g77760 : 566.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1132.0) & (original description: no original description)","protein_coding" "evm.model.tig00001231.5","No alias","Cyanophora paradoxa","(at2g41500 : 90.1) Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.; LACHESIS (LIS); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), WD40 repeat (InterPro:IPR001680), Splicing factor motif (InterPro:IPR003648), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G05720.1); Has 96331 Blast hits to 36444 proteins in 930 species: Archae - 78; Bacteria - 11869; Metazoa - 38307; Fungi - 21059; Plants - 12275; Viruses - 15; Other Eukaryotes - 12728 (source: NCBI BLink). & (q39336|gblp_brana : 83.2) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 180.2) & (original description: no original description)","protein_coding" "evm.model.tig00001264.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001339.14","No alias","Cyanophora paradoxa","(at4g24520 : 87.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (q05001|ncpr_catro : 83.6) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 161.8) & (original description: no original description)","protein_coding" "evm.model.tig00001362.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001371.13","No alias","Cyanophora paradoxa","(p29409|pgkh_spiol : 275.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) (Fragment) - Spinacia oleracea (Spinach) & (at1g56190 : 265.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "evm.model.tig00001545.5","No alias","Cyanophora paradoxa","(at1g35190 : 121.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction, alkaloid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G46490.1); Has 8500 Blast hits to 8467 proteins in 983 species: Archae - 0; Bacteria - 1153; Metazoa - 122; Fungi - 1092; Plants - 4450; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (q8rvf5|gaox2_orysa : 84.3) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (Os20ox2) (Semidwarf-1 protein) - Oryza sativa (Rice) & (reliability: 242.0) & (original description: no original description)","protein_coding" "evm.model.tig00020510.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.48","No alias","Cyanophora paradoxa","(at5g12370 : 80.9) exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description)","protein_coding" "evm.model.tig00020560.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.4","No alias","Cyanophora paradoxa","(at1g30400 : 169.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)","protein_coding" "evm.model.tig00020604.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.131","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020685.19","No alias","Cyanophora paradoxa","(at1g68830 : 137.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 125.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.tig00020685.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020704.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020710.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020780.69","No alias","Cyanophora paradoxa","(at1g13270 : 194.0) Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C.; methionine aminopeptidase 1B (MAP1C); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1C (TAIR:AT3G25740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "evm.model.tig00020801.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020812.6","No alias","Cyanophora paradoxa","(at1g34065 : 119.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)","protein_coding" "evm.model.tig00020904.16","No alias","Cyanophora paradoxa","(p39869|nia_lotja : 578.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (at1g37130 : 561.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (reliability: 1122.0) & (original description: no original description)","protein_coding" "evm.model.tig00020904.170","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020911.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020930.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020941.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020941.42","No alias","Cyanophora paradoxa","(at2g15620 : 185.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (p05314|nir_spiol : 177.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (reliability: 370.0) & (original description: no original description)","protein_coding" "evm.model.tig00020941.43","No alias","Cyanophora paradoxa","(at2g15620 : 270.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (q42997|nir_orysa : 268.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: no original description)","protein_coding" "evm.model.tig00021013.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021015.14","No alias","Cyanophora paradoxa","No description available","protein_coding" "evm.model.tig00021038.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.111","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021108.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021127.107","No alias","Cyanophora paradoxa","(at4g33670 : 251.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (reliability: 502.0) & (original description: no original description)","protein_coding" "evm.model.tig00021127.82","No alias","Cyanophora paradoxa","(at1g03000 : 177.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (p54774|cdc48_soybn : 156.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.tig00021234.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021254.11","No alias","Cyanophora paradoxa","(at1g16800 : 157.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30100.1); Has 9771 Blast hits to 8579 proteins in 1344 species: Archae - 197; Bacteria - 2032; Metazoa - 2727; Fungi - 1277; Plants - 815; Viruses - 364; Other Eukaryotes - 2359 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "evm.model.tig00021275.25","No alias","Cyanophora paradoxa","(q7g8y3|isw2_orysa : 367.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 365.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 730.0) & (original description: no original description)","protein_coding" "evm.model.tig00021318.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021339.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021352.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021366.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021428.1","No alias","Cyanophora paradoxa","(at5g66380 : 85.1) Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.; folate transporter 1 (FOLT1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 2 (TAIR:AT1G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)","protein_coding" "evm.model.tig00021434.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021462.2","No alias","Cyanophora paradoxa","(at5g53140 : 137.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.tig00021468.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021489.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021582.36","No alias","Cyanophora paradoxa","(p36841|nia_volca : 390.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Volvox carteri & (at1g37130 : 374.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description)","protein_coding" "evm.model.tig00021582.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021583.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021586.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021616.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "Glyma.01G015800","No alias","Glycine max","MAP kinase kinase 10","protein_coding" "Glyma.01G024500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G029600","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.01G051300","No alias","Glycine max","NAC-like, activated by AP3/PI","protein_coding" "Glyma.01G095700","No alias","Glycine max","Tetraspanin family protein","protein_coding" "Glyma.01G155200","No alias","Glycine max","Protein of unknown function, DUF647","protein_coding" "Glyma.01G164100","No alias","Glycine max","VPS35 homolog A","protein_coding" "Glyma.01G178100","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.02G004800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G010400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G038300","No alias","Glycine max","F-box family protein","protein_coding" "Glyma.02G058800","No alias","Glycine max","G-box binding factor 1","protein_coding" "Glyma.02G088700","No alias","Glycine max","Protein kinase family protein","protein_coding" "Glyma.02G089650","No alias","Glycine max","nuclear factor Y, subunit C1","protein_coding" "Glyma.02G091400","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding" "Glyma.02G113700","No alias","Glycine max","appr-1-p processing enzyme family protein","protein_coding" "Glyma.02G137200","No alias","Glycine max","Eukaryotic translation initiation factor eIF2A family protein","protein_coding" "Glyma.02G148600","No alias","Glycine max","isopentenyltransferase 3","protein_coding" "Glyma.02G168600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G228100","No alias","Glycine max","glutamine-dependent asparagine synthase 1","protein_coding" "Glyma.02G249000","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding" "Glyma.02G250800","No alias","Glycine max","Glucose-1-phosphate adenylyltransferase family protein","protein_coding" "Glyma.02G289400","No alias","Glycine max","chloroplastic lipocalin","protein_coding" "Glyma.02G290400","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "Glyma.02G294900","No alias","Glycine max","trigger factor type chaperone family protein","protein_coding" "Glyma.03G005900","No alias","Glycine max","Co-chaperone GrpE family protein","protein_coding" "Glyma.03G017350","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G023900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G032100","No alias","Glycine max","plant VAP homolog 12","protein_coding" "Glyma.03G036600","No alias","Glycine max","ovate family protein 2","protein_coding" "Glyma.03G057300","No alias","Glycine max","alfin-like 1","protein_coding" "Glyma.03G087851","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G104300","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "Glyma.03G123500","No alias","Glycine max","Cam interacting protein 111","protein_coding" "Glyma.03G137500","No alias","Glycine max","zinc finger (C2H2 type, AN1-like) family protein","protein_coding" "Glyma.03G174900","No alias","Glycine max","Lipin family protein","protein_coding" "Glyma.03G197000","No alias","Glycine max","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain","protein_coding" "Glyma.03G198400","No alias","Glycine max","decapping 1","protein_coding" "Glyma.03G224500","No alias","Glycine max","Class II aaRS and biotin synthetases superfamily protein","protein_coding" "Glyma.03G243400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding" "Glyma.03G252100","No alias","Glycine max","WHIRLY 2","protein_coding" "Glyma.03G262500","No alias","Glycine max","Leucine-rich receptor-like protein kinase family protein","protein_coding" "Glyma.04G022100","No alias","Glycine max","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding" "Glyma.04G023067","No alias","Glycine max","RING/FYVE/PHD zinc finger superfamily protein","protein_coding" "Glyma.04G024500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G027600","No alias","Glycine max","Papain family cysteine protease","protein_coding" "Glyma.04G033300","No alias","Glycine max","C2H2-like zinc finger protein","protein_coding" "Glyma.04G039400","No alias","Glycine max","THO complex, subunit 5","protein_coding" "Glyma.04G121100","No alias","Glycine max","U-box domain-containing protein kinase family protein","protein_coding" "Glyma.04G148200","No alias","Glycine max","Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)","protein_coding" "Glyma.04G157800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.04G219566","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding" "Glyma.05G053600","No alias","Glycine max","CLP protease proteolytic subunit 2","protein_coding" "Glyma.05G078300","No alias","Glycine max","sulfite oxidase","protein_coding" "Glyma.05G132100","No alias","Glycine max","N-acetylglucosamine-1-phosphate uridylyltransferase 1","protein_coding" "Glyma.05G167700","No alias","Glycine max","ACT domain-containing small subunit of acetolactate synthase protein","protein_coding" "Glyma.05G174400","No alias","Glycine max","eukaryotic translation initiation factor 4B1","protein_coding" "Glyma.05G238600","No alias","Glycine max","Ankyrin repeat family protein","protein_coding" "Glyma.05G243400","No alias","Glycine max","Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "Glyma.05G248900","No alias","Glycine max","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding" "Glyma.06G001900","No alias","Glycine max","UDP-GLUCOSE PYROPHOSPHORYLASE 1","protein_coding" "Glyma.06G034200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G037000","No alias","Glycine max","Protein of unknown function (DUF1645)","protein_coding" "Glyma.06G063300","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "Glyma.06G065900","No alias","Glycine max","serine-rich protein-related","protein_coding" "Glyma.06G109200","No alias","Glycine max","nitrate reductase 1","protein_coding" "Glyma.06G117500","No alias","Glycine max","plastid transcriptionally active 6","protein_coding" "Glyma.06G118000","No alias","Glycine max","subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex","protein_coding" "Glyma.06G126400","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Glyma.06G132500","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.06G152900","No alias","Glycine max","NAC domain containing protein 82","protein_coding" "Glyma.06G183100","No alias","Glycine max","Protein of unknown function (DUF3506)","protein_coding" "Glyma.06G194800","No alias","Glycine max","cycling DOF factor 3","protein_coding" "Glyma.06G236200","No alias","Glycine max","chloroplast 30S ribosomal protein S20, putative","protein_coding" "Glyma.06G304200","No alias","Glycine max","O-fucosyltransferase family protein","protein_coding" "Glyma.07G002300","No alias","Glycine max","vacuolar ATP synthase subunit A","protein_coding" "Glyma.07G010300","No alias","Glycine max","transmembrane nine 7","protein_coding" "Glyma.07G016900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G022800","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "Glyma.07G031500","No alias","Glycine max","O-fucosyltransferase family protein","protein_coding" "Glyma.07G035000","No alias","Glycine max","Dihydrolipoamide acetyltransferase, long form protein","protein_coding" "Glyma.07G070300","No alias","Glycine max","U-box domain-containing protein kinase family protein","protein_coding" "Glyma.07G092600","No alias","Glycine max","Plant protein of unknown function (DUF639)","protein_coding" "Glyma.07G095900","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.07G119500","No alias","Glycine max","vacuolar protein sorting 11","protein_coding" "Glyma.07G125300","No alias","Glycine max","nuclear RNA polymerase C2","protein_coding" "Glyma.07G177000","No alias","Glycine max","tobamovirus multiplication protein 3","protein_coding" "Glyma.07G182600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G195400","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.08G020300","No alias","Glycine max","vacuolar ATP synthase subunit E1","protein_coding" "Glyma.08G037600","No alias","Glycine max","proteinaceous RNase P 1","protein_coding" "Glyma.08G039800","No alias","Glycine max","Fibronectin type III domain-containing protein","protein_coding" "Glyma.08G050000","No alias","Glycine max","Protein of unknown function, DUF599","protein_coding" "Glyma.08G072300","No alias","Glycine max","alternative oxidase 2","protein_coding" "Glyma.08G078300","No alias","Glycine max","Protein of unknown function (DUF1644)","protein_coding" "Glyma.08G124200","No alias","Glycine max","nuclear factor Y, subunit A7","protein_coding" "Glyma.08G129502","No alias","Glycine max","Arabidopsis phospholipase-like protein (PEARLI 4) family","protein_coding" "Glyma.08G138700","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "Glyma.08G193400","No alias","Glycine max","transmembrane nine 7","protein_coding" "Glyma.08G262200","No alias","Glycine max","calcineurin B subunit-related","protein_coding" "Glyma.08G284000","No alias","Glycine max","nitrate transporter2.5","protein_coding" "Glyma.08G289600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G305300","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding" "Glyma.08G305600","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding" "Glyma.08G331200","No alias","Glycine max","Protein of unknown function DUF106, transmembrane","protein_coding" "Glyma.08G350100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G364100","No alias","Glycine max","carboxyesterase 17","protein_coding" "Glyma.09G042800","No alias","Glycine max","LYR family of Fe/S cluster biogenesis protein","protein_coding" "Glyma.09G050600","No alias","Glycine max","cationic amino acid transporter 5","protein_coding" "Glyma.09G060066","No alias","Glycine max","DNA ligase IV","protein_coding" "Glyma.09G067100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G079400","No alias","Glycine max","CBL-interacting protein kinase 1","protein_coding" "Glyma.09G118100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G160900","No alias","Glycine max","Cytochrome P450 superfamily protein","protein_coding" "Glyma.09G171900","No alias","Glycine max","Protein of unknown function (DUF760)","protein_coding" "Glyma.09G176132","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Glyma.09G177200","No alias","Glycine max","IQ-domain 5","protein_coding" "Glyma.09G227200","No alias","Glycine max","Ribosomal protein L1p/L10e family","protein_coding" "Glyma.09G261600","No alias","Glycine max","myb domain protein 17","protein_coding" "Glyma.10G089700","No alias","Glycine max","RNA binding","protein_coding" "Glyma.10G138100","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding" "Glyma.10G153200","No alias","Glycine max","indeterminate(ID)-domain 2","protein_coding" "Glyma.10G241500","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.10G243000","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding" "Glyma.10G249500","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.10G264900","No alias","Glycine max","ABC-2 type transporter family protein","protein_coding" "Glyma.10G267900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G284600","No alias","Glycine max","CAX interacting protein 4","protein_coding" "Glyma.10G292000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G006000","No alias","Glycine max","Protein of unknown function (DUF1423)","protein_coding" "Glyma.11G010700","No alias","Glycine max","Poly (ADP-ribose) glycohydrolase (PARG)","protein_coding" "Glyma.11G026800","No alias","Glycine max","Glucose-methanol-choline (GMC) oxidoreductase family protein","protein_coding" "Glyma.11G036800","No alias","Glycine max","VEFS-Box of polycomb protein","protein_coding" "Glyma.11G045300","No alias","Glycine max","branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)","protein_coding" "Glyma.11G051133","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.11G062100","No alias","Glycine max","nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding","protein_coding" "Glyma.11G090300","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding" "Glyma.11G102200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G108900","No alias","Glycine max","pfkB-like carbohydrate kinase family protein","protein_coding" "Glyma.11G129200","No alias","Glycine max","beta glucosidase 35","protein_coding" "Glyma.11G139500","No alias","Glycine max","pol-like 5","protein_coding" "Glyma.11G155677","No alias","Glycine max","C2H2-like zinc finger protein","protein_coding" "Glyma.11G167200","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Glyma.11G172300","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.11G183600","No alias","Glycine max","F-box/RNI-like superfamily protein","protein_coding" "Glyma.11G194700","No alias","Glycine max","ABC transporter family protein","protein_coding" "Glyma.11G213500","No alias","Glycine max","TPX2 (targeting protein for Xklp2) protein family","protein_coding" "Glyma.11G217100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G235200","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.11G242200","No alias","Glycine max","homeobox protein 6","protein_coding" "Glyma.12G021600","No alias","Glycine max","Adaptin family protein","protein_coding" "Glyma.12G042400","No alias","Glycine max","Glucose-1-phosphate adenylyltransferase family protein","protein_coding" "Glyma.12G042800","No alias","Glycine max","cryptochrome-interacting basic-helix-loop-helix 1","protein_coding" "Glyma.12G120800","No alias","Glycine max","protein kinase C substrate, heavy chain-related","protein_coding" "Glyma.12G162990","No alias","Glycine max","RNA polymerase III subunit RPC82 family protein","protein_coding" "Glyma.12G162999","No alias","Glycine max","squamosa promoter-binding protein-like 12","protein_coding" "Glyma.12G177600","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding" "Glyma.12G198400","No alias","Glycine max","B-box type zinc finger family protein","protein_coding" "Glyma.13G002150","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G043800","No alias","Glycine max","white-brown complex homolog protein 11","protein_coding" "Glyma.13G074800","No alias","Glycine max","calmodulin 5","protein_coding" "Glyma.13G084000","No alias","Glycine max","nitrate reductase 1","protein_coding" "Glyma.13G097200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G113200","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding" "Glyma.13G118100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G118200","No alias","Glycine max","chromatin remodeling factor18","protein_coding" "Glyma.13G152508","No alias","Glycine max","transcription factor-related","protein_coding" "Glyma.13G172600","No alias","Glycine max","RAC-like 2","protein_coding" "Glyma.13G193700","No alias","Glycine max","TGACG motif-binding factor 6","protein_coding" "Glyma.13G199300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G204400","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.13G214900","No alias","Glycine max","tubby like protein 3","protein_coding" "Glyma.13G229500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G246000","No alias","Glycine max","sphingosine kinase 1","protein_coding" "Glyma.13G249900","No alias","Glycine max","plastid developmental protein DAG, putative","protein_coding" "Glyma.13G261400","No alias","Glycine max","glyoxalase II 3","protein_coding" "Glyma.13G280000","No alias","Glycine max","NAC domain containing protein 2","protein_coding" "Glyma.14G000400","No alias","Glycine max","FAR1-related sequence 5","protein_coding" "Glyma.14G071800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.14G079000","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding" "Glyma.14G123000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.14G162400","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.14G164900","No alias","Glycine max","nitrate reductase 1","protein_coding" "Glyma.14G165000","No alias","Glycine max","nitrate reductase 1","protein_coding" "Glyma.14G207400","No alias","Glycine max","Protein of unknown function (DUF607)","protein_coding" "Glyma.15G001900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G005600","No alias","Glycine max","serine-rich protein-related","protein_coding" "Glyma.15G033700","No alias","Glycine max","outer envelope protein of 80 kDa","protein_coding" "Glyma.15G045900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G141400","No alias","Glycine max","RGA-like 2","protein_coding" "Glyma.15G247700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G248550","No alias","Glycine max","ribosomal protein S16","protein_coding" "Glyma.16G030300","No alias","Glycine max","Uncharacterized conserved protein (DUF2358)","protein_coding" "Glyma.16G056900","No alias","Glycine max","Peptidase family M48 family protein","protein_coding" "Glyma.16G072600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.16G094900","No alias","Glycine max","x-ray induced transcript 1","protein_coding" "Glyma.16G102551","No alias","Glycine max","alanine:glyoxylate aminotransferase 3","protein_coding" "Glyma.16G109300","No alias","Glycine max","cytochrome P450, family 707, subfamily A, polypeptide 1","protein_coding" "Glyma.16G145500","No alias","Glycine max","Seven transmembrane MLO family protein","protein_coding" "Glyma.16G152200","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding" "Glyma.16G165000","No alias","Glycine max","polypyrimidine tract-binding protein 3","protein_coding" "Glyma.16G174300","No alias","Glycine max","disease resistance family protein / LRR family protein","protein_coding" "Glyma.16G201600","No alias","Glycine max","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding" "Glyma.17G005900","No alias","Glycine max","Pollen Ole e 1 allergen and extensin family protein","protein_coding" "Glyma.17G098900","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.17G101000","No alias","Glycine max","cycling DOF factor 3","protein_coding" "Glyma.17G134700","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.17G171000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.17G205300","No alias","Glycine max","gibberellin 3-oxidase 1","protein_coding" "Glyma.18G052000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.18G060200","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "Glyma.18G067200","No alias","Glycine max","alpha-glucan phosphorylase 2","protein_coding" "Glyma.18G195900","No alias","Glycine max","acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit","protein_coding" "Glyma.18G212100","No alias","Glycine max","saposin B domain-containing protein","protein_coding" "Glyma.18G264000","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.18G286500","No alias","Glycine max","PsbP-like protein 1","protein_coding" "Glyma.18G291900","No alias","Glycine max","CLP protease proteolytic subunit 3","protein_coding" "Glyma.19G018700","No alias","Glycine max","AAA-ATPase 1","protein_coding" "Glyma.19G027600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.19G049300","No alias","Glycine max","Mannose-6-phosphate isomerase, type I","protein_coding" "Glyma.19G061900","No alias","Glycine max","peptide deformylase 1B","protein_coding" "Glyma.19G071800","No alias","Glycine max","sulfite oxidase","protein_coding" "Glyma.19G128100","No alias","Glycine max","serine carboxypeptidase-like 45","protein_coding" "Glyma.19G183100","No alias","Glycine max","RNApolymerase sigma-subunit F","protein_coding" "Glyma.19G187000","No alias","Glycine max","UDP-glucosyl transferase 73C2","protein_coding" "Glyma.19G187800","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding" "Glyma.19G190900","No alias","Glycine max","Enolase","protein_coding" "Glyma.19G209800","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Glyma.19G257100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.19G263600","No alias","Glycine max","RNA-binding protein","protein_coding" "Glyma.20G001800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G110600","No alias","Glycine max","ARM repeat superfamily protein","protein_coding" "Glyma.20G114000","No alias","Glycine max","protein phosphatase 2A subunit A2","protein_coding" "Glyma.20G125550","No alias","Glycine max","ABC-2 type transporter family protein","protein_coding" "Glyma.20G132400","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding" "Glyma.20G140900","No alias","Glycine max","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding" "Glyma.20G144400","No alias","Glycine max","time for coffee","protein_coding" "Glyma.20G155800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.20G176300","No alias","Glycine max","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding" "Glyma.20G229600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.20G230700","No alias","Glycine max","Prefoldin chaperone subunit family protein","protein_coding" "Glyma.20G246100","No alias","Glycine max","UDP-galactose transporter 6","protein_coding" "Glyma.20G247200","No alias","Glycine max","Nse4, component of Smc5/6 DNA repair complex","protein_coding" "GRMZM2G001272","No alias","Zea mays","tubby like protein 10","protein_coding" "GRMZM2G002492","No alias","Zea mays","Undecaprenyl pyrophosphate synthetase family protein","protein_coding" "GRMZM2G004528","No alias","Zea mays","myo-inositol-1-phosphate synthase 2","protein_coding" "GRMZM2G004534","No alias","Zea mays","Pyruvate kinase family protein","protein_coding" "GRMZM2G005433","No alias","Zea mays","photosystem II reaction center PSB28 protein","protein_coding" "GRMZM2G005859","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G006219","No alias","Zea mays","plant VAP homolog 12","protein_coding" "GRMZM2G007754","No alias","Zea mays","global transcription factor group A2","protein_coding" "GRMZM2G008242","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding" "GRMZM2G010960","No alias","Zea mays","GATA type zinc finger transcription factor family protein","protein_coding" "GRMZM2G013430","No alias","Zea mays","serine acetyltransferase 2;1","protein_coding" "GRMZM2G014166","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G015040","No alias","Zea mays","phosphatidic acid phosphatase-related / PAP2-related","protein_coding" "GRMZM2G015127","No alias","Zea mays","actin depolymerizing factor 7","protein_coding" "GRMZM2G016558","No alias","Zea mays","ankyrin repeat family protein","protein_coding" "GRMZM2G016749","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding" "GRMZM2G017110","No alias","Zea mays","glutamate decarboxylase","protein_coding" "GRMZM2G018441","No alias","Zea mays","2-phosphoglycolate phosphatase 1","protein_coding" "GRMZM2G018649","No alias","Zea mays","plasma membrane intrinsic protein 2","protein_coding" "GRMZM2G021074","No alias","Zea mays","RELA/SPOT homolog 3","protein_coding" "GRMZM2G023105","No alias","Zea mays","ENTH/VHS/GAT family protein","protein_coding" "GRMZM2G025175","No alias","Zea mays","Pollen Ole e 1 allergen and extensin family protein","protein_coding" "GRMZM2G025954","No alias","Zea mays","thioredoxin F2","protein_coding" "GRMZM2G026804","No alias","Zea mays","Pectin lyase-like superfamily protein","protein_coding" "GRMZM2G030038","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G032821","No alias","Zea mays","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G032947","No alias","Zea mays","sulfite oxidase","protein_coding" "GRMZM2G035202","No alias","Zea mays","Protein-tyrosine phosphatase-like, PTPLA","protein_coding" "GRMZM2G037472","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G037650","No alias","Zea mays","myb domain protein 42","protein_coding" "GRMZM2G038303","No alias","Zea mays","nuclear factor Y, subunit A3","protein_coding" "GRMZM2G039385","No alias","Zea mays","phosphatidyl serine synthase family protein","protein_coding" "GRMZM2G044498","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G045154","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "GRMZM2G047055","No alias","Zea mays","actin-11","protein_coding" "GRMZM2G047368","No alias","Zea mays","plasma membrane intrinsic protein 2","protein_coding" "GRMZM2G048661","No alias","Zea mays","RNI-like superfamily protein","protein_coding" "GRMZM2G048806","No alias","Zea mays","Plant protein of unknown function (DUF827)","protein_coding" "GRMZM2G049190","No alias","Zea mays","sulfoquinovosyldiacylglycerol 2","protein_coding" "GRMZM2G051276","No alias","Zea mays","myo-inositol monophosphatase like 1","protein_coding" "GRMZM2G052416","No alias","Zea mays","SWIB/MDM2 domain superfamily protein","protein_coding" "GRMZM2G052696","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G053722","No alias","Zea mays","protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases","protein_coding" "GRMZM2G053909","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G054109","No alias","Zea mays","Calmodulin-binding protein","protein_coding" "GRMZM2G054207","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G055857","No alias","Zea mays","GroES-like zinc-binding alcohol dehydrogenase family protein","protein_coding" "GRMZM2G060079","No alias","Zea mays","oxidoreductase, 2OG-Fe(II) oxygenase family protein","protein_coding" "GRMZM2G060567","No alias","Zea mays","Translation initiation factor eIF3 subunit","protein_coding" "GRMZM2G061485","No alias","Zea mays","replicon protein A2","protein_coding" "GRMZM2G062761","No alias","Zea mays","MAP kinase 9","protein_coding" "GRMZM2G063369","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "GRMZM2G065244","No alias","Zea mays","Auxin-responsive family protein","protein_coding" "GRMZM2G065341","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G068557","No alias","Zea mays","ferric reduction oxidase 7","protein_coding" "GRMZM2G068690","No alias","Zea mays","SCP1-like small phosphatase 4","protein_coding" "GRMZM2G069198","No alias","Zea mays","natural resistance-associated macrophage protein 1","protein_coding" "GRMZM2G070218","No alias","Zea mays","shikimate kinase 1","protein_coding" "GRMZM2G071021","No alias","Zea mays","aldehyde dehydrogenase 2C4","protein_coding" "GRMZM2G071100","No alias","Zea mays","Calcium-binding EF-hand family protein","protein_coding" "GRMZM2G072632","No alias","Zea mays","Auxin efflux carrier family protein","protein_coding" "GRMZM2G073929","No alias","Zea mays","3-oxo-5-alpha-steroid 4-dehydrogenase family protein","protein_coding" "GRMZM2G076723","No alias","Zea mays","nitrate reductase 1","protein_coding" "GRMZM2G077942","No alias","Zea mays","actin depolymerizing factor 5","protein_coding" "GRMZM2G078650","No alias","Zea mays","PLC-like phosphodiesterases superfamily protein","protein_coding" "GRMZM2G079499","No alias","Zea mays","LORELEI-LIKE-GPI-ANCHORED PROTEIN 1","protein_coding" "GRMZM2G080940","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding" "GRMZM2G081192","No alias","Zea mays","plasma membrane intrinsic protein 2","protein_coding" "GRMZM2G084940","No alias","Zea mays","Plant neutral invertase family protein","protein_coding" "GRMZM2G085854","No alias","Zea mays","UDP-glucosyl transferase 72B3","protein_coding" "GRMZM2G088436","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G089149","No alias","Zea mays","Protein of unknown function, DUF647","protein_coding" "GRMZM2G089454","No alias","Zea mays","ADP-ribosylation factor-like A1A","protein_coding" "GRMZM2G090480","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G091276","No alias","Zea mays","Auxin-responsive GH3 family protein","protein_coding" "GRMZM2G092125","No alias","Zea mays","plasma membrane intrinsic protein 2","protein_coding" "GRMZM2G092991","No alias","Zea mays","Protein of unknown function (DUF803)","protein_coding" "GRMZM2G095206","No alias","Zea mays","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "GRMZM2G095372","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G097122","No alias","Zea mays","actin depolymerizing factor 11","protein_coding" "GRMZM2G097434","No alias","Zea mays","Phosphoinositide phosphatase family protein","protein_coding" "GRMZM2G097499","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G098527","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G102714","No alias","Zea mays","Ca-2+ dependent nuclease","protein_coding" "GRMZM2G103841","No alias","Zea mays","Protein of unknown function (DUF594)","protein_coding" "GRMZM2G104795","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G105419","No alias","Zea mays","SAUR-like auxin-responsive protein family","protein_coding" "GRMZM2G107228","No alias","Zea mays","Peroxidase superfamily protein","protein_coding" "GRMZM2G107609","No alias","Zea mays","glycine-rich protein","protein_coding" "GRMZM2G111998","No alias","Zea mays","beta-xylosidase 3","protein_coding" "GRMZM2G112623","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G113409","No alias","Zea mays","chloride channel C","protein_coding" "GRMZM2G114575","No alias","Zea mays","CBL-interacting protein kinase 1","protein_coding" "GRMZM2G114739","No alias","Zea mays","sulfite oxidase","protein_coding" "GRMZM2G116514","No alias","Zea mays","RHOMBOID-like protein 3","protein_coding" "GRMZM2G117222","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G117754","No alias","Zea mays","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding" "GRMZM2G117851","No alias","Zea mays","G-box binding factor 3","protein_coding" "GRMZM2G118208","No alias","Zea mays","phosphate transporter 3;1","protein_coding" "GRMZM2G118295","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G125823","No alias","Zea mays","glucuronidase 3","protein_coding" "GRMZM2G127776","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G128214","No alias","Zea mays","diacylglycerol kinase 7","protein_coding" "GRMZM2G131205","No alias","Zea mays","cinnamoyl coa reductase 1","protein_coding" "GRMZM2G131245","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G132759","No alias","Zea mays","ubiquitin-conjugating enzyme 11","protein_coding" "GRMZM2G135195","No alias","Zea mays","galacturonosyltransferase 4","protein_coding" "GRMZM2G136887","No alias","Zea mays","telomere repeat binding factor 1","protein_coding" "GRMZM2G136901","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding" "GRMZM2G137816","No alias","Zea mays","Protein of unknown function (DUF1230)","protein_coding" "GRMZM2G137930","No alias","Zea mays","pyrophosphorylase 4","protein_coding" "GRMZM2G139369","No alias","Zea mays","sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors","protein_coding" "GRMZM2G140537","No alias","Zea mays","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "GRMZM2G141208","No alias","Zea mays","microtubule-associated protein 65-2","protein_coding" "GRMZM2G142068","No alias","Zea mays","Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GRMZM2G142918","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G144997","No alias","Zea mays","DNAJ-like 20","protein_coding" "GRMZM2G145944","No alias","Zea mays","phospholipase D delta","protein_coding" "GRMZM2G146514","No alias","Zea mays","zinc finger protein 1","protein_coding" "GRMZM2G146913","No alias","Zea mays","glutathione S-transferase TAU 18","protein_coding" "GRMZM2G147775","No alias","Zea mays","actin depolymerizing factor 5","protein_coding" "GRMZM2G151992","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "GRMZM2G151993","No alias","Zea mays","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "GRMZM2G154417","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G154735","No alias","Zea mays","HVA22 homologue E","protein_coding" "GRMZM2G155357","No alias","Zea mays","phosphorylethanolamine cytidylyltransferase 1","protein_coding" "GRMZM2G158831","No alias","Zea mays","Family of unknown function (DUF566)","protein_coding" "GRMZM2G162347","No alias","Zea mays","SCP1-like small phosphatase 4","protein_coding" "GRMZM2G164470","No alias","Zea mays","lipases;hydrolases, acting on ester bonds","protein_coding" "GRMZM2G164797","No alias","Zea mays","Protein of unknown function (DUF803)","protein_coding" "GRMZM2G165987","No alias","Zea mays","RmlC-like cupins superfamily protein","protein_coding" "GRMZM2G167164","No alias","Zea mays","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding" "GRMZM2G169584","No alias","Zea mays","NB-ARC domain-containing disease resistance protein","protein_coding" "GRMZM2G169593","No alias","Zea mays","tryptophan synthase beta-subunit 1","protein_coding" "GRMZM2G170388","No alias","Zea mays","Pectin lyase-like superfamily protein","protein_coding" "GRMZM2G170625","No alias","Zea mays","Mannose-binding lectin superfamily protein","protein_coding" "GRMZM2G174807","No alias","Zea mays","plasma membrane intrinsic protein 1;4","protein_coding" "GRMZM2G178693","No alias","Zea mays","plasma membrane intrinsic protein 2","protein_coding" "GRMZM2G179432","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "GRMZM2G301885","No alias","Zea mays","polyol/monosaccharide transporter 5","protein_coding" "GRMZM2G305159","No alias","Zea mays","autoinhibited Ca(2+)-ATPase, isoform 4","protein_coding" "GRMZM2G310115","No alias","Zea mays","plectin-related","protein_coding" "GRMZM2G335738","No alias","Zea mays","RAB GTPase homolog A5A","protein_coding" "GRMZM2G341366","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G342042","No alias","Zea mays","CBL-interacting protein kinase 23","protein_coding" "GRMZM2G346113","No alias","Zea mays","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding" "GRMZM2G350802","No alias","Zea mays","actin binding protein family","protein_coding" "GRMZM2G351747","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G358281","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G366778","No alias","Zea mays","general regulatory factor 7","protein_coding" "GRMZM2G383967","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G386209","No alias","Zea mays","Auxin-responsive family protein","protein_coding" "GRMZM2G388099","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "GRMZM2G388818","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G396477","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "GRMZM2G397889","No alias","Zea mays","receptor lectin kinase","protein_coding" "GRMZM2G411084","No alias","Zea mays","WPP domain protein 2","protein_coding" "GRMZM2G414496","No alias","Zea mays","KU70 homolog","protein_coding" "GRMZM2G414528","No alias","Zea mays","beta carbonic anhydrase 5","protein_coding" "GRMZM2G416698","No alias","Zea mays","RELA/SPOT homolog 1","protein_coding" "GRMZM2G418415","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding" "GRMZM2G423111","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G427529","No alias","Zea mays","RNI-like superfamily protein","protein_coding" "GRMZM2G428027","No alias","Zea mays","nitrate reductase 1","protein_coding" "GRMZM2G428964","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G429940","No alias","Zea mays","SOS3-interacting protein 3","protein_coding" "GRMZM2G434317","No alias","Zea mays","Protein of unknown function (DUF707)","protein_coding" "GRMZM2G438253","No alias","Zea mays","RNI-like superfamily protein","protein_coding" "GRMZM2G439544","No alias","Zea mays","EYES ABSENT homolog","protein_coding" "GRMZM2G443509","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding" "GRMZM2G463471","No alias","Zea mays","actin depolymerizing factor 7","protein_coding" "GRMZM2G464575","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G473976","No alias","Zea mays","prenylcysteine methylesterase","protein_coding" "GRMZM2G500685","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G514349","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G521647","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "GRMZM2G568636","No alias","Zea mays","nitrate reductase 1","protein_coding" "GRMZM2G701585","No alias","Zea mays","DNAse I-like superfamily protein","protein_coding" "GRMZM5G801953","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G813886","No alias","Zea mays","ABC-2 type transporter family protein","protein_coding" "GRMZM5G822888","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G835286","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G837869","No alias","Zea mays","cytochrome P450, family 97, subfamily A, polypeptide 3","protein_coding" "GRMZM5G841083","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G852502","No alias","Zea mays","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding" "GRMZM5G860072","No alias","Zea mays","3-oxo-5-alpha-steroid 4-dehydrogenase family protein","protein_coding" "GRMZM5G862101","No alias","Zea mays","HVA22 homologue A","protein_coding" "GRMZM5G869453","No alias","Zea mays","Pyruvate kinase family protein","protein_coding" "GRMZM5G878558","No alias","Zea mays","nitrate reductase 1","protein_coding" "GRMZM5G879319","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G883008","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G883969","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G888352","No alias","Zea mays","S-locus lectin protein kinase family protein","protein_coding" "GRMZM5G898740","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Kfl00001_0790","kfl00001_0790_v1.1","Klebsormidium nitens","(at4g11440 : 233.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: shoot apex, embryo, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26651 Blast hits to 14053 proteins in 444 species: Archae - 0; Bacteria - 6; Metazoa - 11179; Fungi - 8014; Plants - 4538; Viruses - 0; Other Eukaryotes - 2914 (source: NCBI BLink). & (p29518|bt1_maize : 122.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 466.0) & (original description: no original description)","protein_coding" "Kfl00002_0170","kfl00002_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00002_0370","kfl00002_0370_v1.1","Klebsormidium nitens","(q40250|rbs_lacsa : 209.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Lactuca sativa (Garden lettuce) & (at5g38420 : 197.0) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: in 8 components; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)","protein_coding" "Kfl00002_0430","kfl00002_0430_v1.1","Klebsormidium nitens","(at5g52210 : 257.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; GTP-binding protein 1 (GB1); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 10306 Blast hits to 10286 proteins in 478 species: Archae - 29; Bacteria - 165; Metazoa - 4931; Fungi - 1428; Plants - 1618; Viruses - 0; Other Eukaryotes - 2135 (source: NCBI BLink). & (p51824|arf1_soltu : 117.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 514.0) & (original description: no original description)","protein_coding" "Kfl00004_0270","kfl00004_0270_v1.1","Klebsormidium nitens","(q42689|glna2_chlre : 487.0) Glutamine synthetase, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS2) - Chlamydomonas reinhardtii & (at5g35630 : 387.0) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (reliability: 774.0) & (original description: no original description)","protein_coding" "Kfl00004_0280","kfl00004_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00005_0480","kfl00005_0480_v1.1","Klebsormidium nitens","(at5g51020 : 102.0) Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.; CRUMPLED LEAF (CRL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1001 (InterPro:IPR010404); Has 109 Blast hits to 109 proteins in 37 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "Kfl00005_0630","kfl00005_0630_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00005_0640","kfl00005_0640_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00008_0080","kfl00008_0080_v1.1","Klebsormidium nitens","(p33278|sui1_orysa : 155.0) Protein translation factor SUI1 homolog (Protein GOS2) (Translational initiation factor 1) (Protein eIF1) - Oryza sativa (Rice) & (at5g54760 : 151.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1). & (reliability: 302.0) & (original description: no original description)","protein_coding" "Kfl00008_0490","kfl00008_0490_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00009_0280","kfl00009_0280_v1.1","Klebsormidium nitens","(at4g22260 : 253.0) Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: no original description)","protein_coding" "Kfl00009_0500","kfl00009_0500_v1.1","Klebsormidium nitens","(p13869|cb12_pethy : 139.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 138.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)","protein_coding" "Kfl00009_0510","kfl00009_0510_v1.1","Klebsormidium nitens","(at3g54890 : 130.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (p13869|cb12_pethy : 125.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 260.0) & (original description: no original description)","protein_coding" "Kfl00011_0150","kfl00011_0150_v1.1","Klebsormidium nitens","(at1g61740 : 84.0) Sulfite exporter TauE/SafE family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT1G11540.1); Has 2571 Blast hits to 2364 proteins in 652 species: Archae - 89; Bacteria - 1424; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 853 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description)","protein_coding" "Kfl00013_0450","kfl00013_0450_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00013_0550","kfl00013_0550_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00015_0220","kfl00015_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00016_0070","kfl00016_0070_v1.1","Klebsormidium nitens","(at5g39040 : 370.0) Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.; transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 311.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 740.0) & (original description: no original description)","protein_coding" "Kfl00019_0260","kfl00019_0260_v1.1","Klebsormidium nitens","(at5g13420 : 378.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: catalytic activity, transaldolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transaldolase subfamily (InterPro:IPR004732), Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase, active site (InterPro:IPR018225), Transaldolase, bacterial/plant type (InterPro:IPR014634), Transaldolase (InterPro:IPR001585); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 756.0) & (original description: no original description)","protein_coding" "Kfl00020_0020","kfl00020_0020_v1.1","Klebsormidium nitens","(at2g05620 : 134.0) Involved in electron flow in Photosystem I. Essential for photoprotection.; proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)","protein_coding" "Kfl00020_0530","kfl00020_0530_v1.1","Klebsormidium nitens","(at2g42680 : 167.0) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1A (MBF1A); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1); Has 672 Blast hits to 672 proteins in 252 species: Archae - 42; Bacteria - 8; Metazoa - 193; Fungi - 147; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "Kfl00021_0140","kfl00021_0140_v1.1","Klebsormidium nitens","(at5g04460 : 156.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Ring/U-Box superfamily protein (TAIR:AT2G27950.1). & (reliability: 312.0) & (original description: no original description)","protein_coding" "Kfl00021_0260","kfl00021_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00025_0040","kfl00025_0040_v1.1","Klebsormidium nitens","(at3g01910 : 468.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p39866|nia2_phavu : 238.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 936.0) & (original description: no original description)","protein_coding" "Kfl00025_0070","kfl00025_0070_v1.1","Klebsormidium nitens","(q42967|dcup_tobac : 323.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at3g14930 : 322.0) HEME1; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT2G40490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 644.0) & (original description: no original description)","protein_coding" "Kfl00026_0030","kfl00026_0030_v1.1","Klebsormidium nitens","(at4g04850 : 651.0) member of Putative potassium transporter family; K+ efflux antiporter 3 (KEA3); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, metabolic process, transmembrane transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153), NAD(P)-binding domain (InterPro:IPR016040), Regulator of K+ conductance, N-terminal (InterPro:IPR003148); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 1 (TAIR:AT1G01790.1). & (reliability: 1302.0) & (original description: no original description)","protein_coding" "Kfl00026_0390","kfl00026_0390_v1.1","Klebsormidium nitens","(at2g19810 : 237.0) CCCH-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT4G29190.1); Has 721 Blast hits to 690 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 6; Plants - 412; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)","protein_coding" "Kfl00027_0540","kfl00027_0540_v1.1","Klebsormidium nitens","(at5g24870 : 106.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G10650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "Kfl00028_0070","kfl00028_0070_v1.1","Klebsormidium nitens","(at5g17170 : 238.0) enhancer of sos3-1 (ENH1); FUNCTIONS IN: metal ion binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: protein containing PDZ domain, a K-box domain, and a TPR region (TAIR:AT1G55480.1); Has 199 Blast hits to 197 proteins in 82 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)","protein_coding" "Kfl00029_0010","kfl00029_0010_v1.1","Klebsormidium nitens","(at1g33270 : 265.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "Kfl00029_0150","kfl00029_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00030_0090","kfl00030_0090_v1.1","Klebsormidium nitens","(p24258|cah2_chlre : 108.0) Carbonic anhydrase 2 precursor (EC 4.2.1.1) (Carbonate dehydratase 2) (CA2) [Contains: Carbonic anhydrase 2 large chain; Carbonic anhydrase 2 small chain] - Chlamydomonas reinhardtii & (at1g08065 : 103.0) alpha carbonic anhydrase 5 (ACA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3351 Blast hits to 3338 proteins in 543 species: Archae - 0; Bacteria - 710; Metazoa - 2051; Fungi - 82; Plants - 328; Viruses - 7; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)","protein_coding" "Kfl00030_0220","kfl00030_0220_v1.1","Klebsormidium nitens","(at5g13190 : 104.0) CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "Kfl00030_0250","kfl00030_0250_v1.1","Klebsormidium nitens","(at2g01060 : 108.0) myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "Kfl00030_g25","kfl00030_g25_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00031_0300","kfl00031_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00032_0120","kfl00032_0120_v1.1","Klebsormidium nitens","(at3g18890 : 252.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 26348 Blast hits to 17063 proteins in 1661 species: Archae - 97; Bacteria - 5228; Metazoa - 9723; Fungi - 4680; Plants - 1695; Viruses - 652; Other Eukaryotes - 4273 (source: NCBI BLink). & (reliability: 504.0) & (original description: no original description)","protein_coding" "Kfl00034_0060","kfl00034_0060_v1.1","Klebsormidium nitens","(at1g65980 : 167.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "Kfl00036_0090","kfl00036_0090_v1.1","Klebsormidium nitens","(at1g70570 : 602.0) anthranilate phosphoribosyltransferase, putative; FUNCTIONS IN: anthranilate phosphoribosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 3, N-terminal (InterPro:IPR017459), Glycosyl transferase, family 3 (InterPro:IPR000312). & (reliability: 1204.0) & (original description: no original description)","protein_coding" "Kfl00039_0340","kfl00039_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00040_0210","kfl00040_0210_v1.1","Klebsormidium nitens","(at4g02620 : 182.0) vacuolar ATPase subunit F family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit F, eukaryotic (InterPro:IPR005772), ATPase, V1/A1 complex, subunit F (InterPro:IPR008218); Has 520 Blast hits to 520 proteins in 240 species: Archae - 39; Bacteria - 0; Metazoa - 211; Fungi - 130; Plants - 61; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "Kfl00042_0185","kfl00042_0185_v1.1","Klebsormidium nitens","(at1g01220 : 186.0) Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.; L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)","protein_coding" "Kfl00043_0390","kfl00043_0390_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00044_0140","kfl00044_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00045_0290","kfl00045_0290_v1.1","Klebsormidium nitens","(at5g13110 : 754.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43839|g6pdc_soltu : 750.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (reliability: 1508.0) & (original description: no original description)","protein_coding" "Kfl00047_0080","kfl00047_0080_v1.1","Klebsormidium nitens","(at1g08090 : 500.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 1000.0) & (original description: no original description)","protein_coding" "Kfl00048_g7","kfl00048_g7_v1.1","Klebsormidium nitens","(at2g23090 : 115.0) Uncharacterised protein family SERF; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family SERF (InterPro:IPR007513); Has 164 Blast hits to 164 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 42; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)","protein_coding" "Kfl00050_0040","kfl00050_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00052_0260","kfl00052_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00054_0240","kfl00054_0240_v1.1","Klebsormidium nitens","(at5g50200 : 100.0) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.; WOUND-RESPONSIVE 3 (WR3); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: nitrate transport, response to nitrate, response to wounding; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G24730.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "Kfl00059_0330","kfl00059_0330_v1.1","Klebsormidium nitens","(at3g14980 : 157.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description)","protein_coding" "Kfl00060_0090","kfl00060_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00060_0210","kfl00060_0210_v1.1","Klebsormidium nitens","(at1g30890 : 299.0) Integral membrane HRF1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Hrf1 (InterPro:IPR005578); BEST Arabidopsis thaliana protein match is: Integral membrane HRF1 family protein (TAIR:AT3G59500.1); Has 474 Blast hits to 474 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 142; Plants - 75; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)","protein_coding" "Kfl00061_0370","kfl00061_0370_v1.1","Klebsormidium nitens","(at5g55310 : 669.0) Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.; DNA topoisomerase 1 beta (TOP1BETA); FUNCTIONS IN: DNA topoisomerase type I activity; INVOLVED IN: DNA topological change; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type (InterPro:IPR013030), DNA topoisomerase I, DNA binding, eukaryotic-type (InterPro:IPR008336), DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010); BEST Arabidopsis thaliana protein match is: DNA topoisomerase I alpha (TAIR:AT5G55300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93119|top1_dauca : 548.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (reliability: 1338.0) & (original description: no original description)","protein_coding" "Kfl00065_0160","kfl00065_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00065_0180","kfl00065_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00066_0220","kfl00066_0220_v1.1","Klebsormidium nitens","(at5g41610 : 451.0) member of Putative Na+/H+ antiporter family; ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 17 (TAIR:AT4G23700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 902.0) & (original description: no original description)","protein_coding" "Kfl00084_0240","kfl00084_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00090_0290","kfl00090_0290_v1.1","Klebsormidium nitens","(at5g26340 : 584.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 523.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1168.0) & (original description: no original description)","protein_coding" "Kfl00090_0330","kfl00090_0330_v1.1","Klebsormidium nitens","(at5g62720 : 114.0) Integral membrane HPP family protein; CONTAINS InterPro DOMAIN/s: HPP (InterPro:IPR007065); BEST Arabidopsis thaliana protein match is: Integral membrane HPP family protein (TAIR:AT3G47980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "Kfl00092_0050","kfl00092_0050_v1.1","Klebsormidium nitens","(at1g48450 : 245.0) Protein of unknown function (DUF760); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT3G17800.1). & (reliability: 490.0) & (original description: no original description)","protein_coding" "Kfl00093_0070","kfl00093_0070_v1.1","Klebsormidium nitens","(q02060|psbs_spiol : 241.0) Photosystem II 22 kDa protein, chloroplast precursor (CP22) - Spinacia oleracea (Spinach) & (at1g44575 : 230.0) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.; NONPHOTOCHEMICAL QUENCHING 4 (NPQ4); FUNCTIONS IN: chlorophyll binding, xanthophyll binding; INVOLVED IN: response to karrikin, nonphotochemical quenching; LOCATED IN: chloroplast thylakoid membrane, chloroplast, PSII associated light-harvesting complex II, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)","protein_coding" "Kfl00093_0130","kfl00093_0130_v1.1","Klebsormidium nitens","(at3g02510 : 365.0) Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: chromatin binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G16040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 730.0) & (original description: no original description)","protein_coding" "Kfl00093_0140","kfl00093_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00098_0060","kfl00098_0060_v1.1","Klebsormidium nitens","(q40070|psbr_horvu : 102.0) Photosystem II 10 kDa polypeptide, chloroplast precursor - Hordeum vulgare (Barley) & (at1g79040 : 84.7) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)","protein_coding" "Kfl00098_0090","kfl00098_0090_v1.1","Klebsormidium nitens","(p27495|cb24_tobac : 389.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 374.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description)","protein_coding" "Kfl00098_0260","kfl00098_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00103_0180","kfl00103_0180_v1.1","Klebsormidium nitens","(at2g36310 : 333.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase 2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description)","protein_coding" "Kfl00104_0060","kfl00104_0060_v1.1","Klebsormidium nitens","(at4g27310 : 80.5) B-box type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT5G54470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "Kfl00104_0100","kfl00104_0100_v1.1","Klebsormidium nitens",""(at2g34720 : 112.0) ""nuclear factor Y, subunit A4"" (NF-YA4); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A7 (TAIR:AT1G30500.2); Has 682 Blast hits to 682 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 131; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)"","protein_coding" "Kfl00105_0090","kfl00105_0090_v1.1","Klebsormidium nitens","(at3g07090 : 196.0) PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)","protein_coding" "Kfl00106_0270","kfl00106_0270_v1.1","Klebsormidium nitens","(at1g06150 : 147.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 7 (TAIR:AT2G31280.1). & (reliability: 294.0) & (original description: no original description)","protein_coding" "Kfl00107_0270","kfl00107_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00108_0040","kfl00108_0040_v1.1","Klebsormidium nitens","(at1g18260 : 163.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)","protein_coding" "Kfl00108_0050","kfl00108_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00114_0190","kfl00114_0190_v1.1","Klebsormidium nitens","(at5g61060 : 138.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (reliability: 270.0) & (original description: no original description)","protein_coding" "Kfl00134_0070","kfl00134_0070_v1.1","Klebsormidium nitens","(at3g12350 : 90.5) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364). & (reliability: 181.0) & (original description: no original description)","protein_coding" "Kfl00135_g1","kfl00135_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00136_0220","kfl00136_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00137_0250","kfl00137_0250_v1.1","Klebsormidium nitens","(at5g13630 : 2070.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4140.0) & (original description: no original description)","protein_coding" "Kfl00138_0040","kfl00138_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00140_0010","kfl00140_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00147_0260","kfl00147_0260_v1.1","Klebsormidium nitens","(q04960|dnjh_cucsa : 578.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (at3g44110 : 566.0) homologous to the co-chaperon DNAJ protein from E coli; DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26521 Blast hits to 26345 proteins in 3465 species: Archae - 213; Bacteria - 10015; Metazoa - 4280; Fungi - 2432; Plants - 2547; Viruses - 88; Other Eukaryotes - 6946 (source: NCBI BLink). & (reliability: 1132.0) & (original description: no original description)","protein_coding" "Kfl00150_0090","kfl00150_0090_v1.1","Klebsormidium nitens","(at2g25350 : 148.0) Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT4G32160.1); Has 23905 Blast hits to 15623 proteins in 1176 species: Archae - 308; Bacteria - 2272; Metazoa - 12562; Fungi - 2077; Plants - 1184; Viruses - 165; Other Eukaryotes - 5337 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)","protein_coding" "Kfl00154_0060","kfl00154_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00155_0090","kfl00155_0090_v1.1","Klebsormidium nitens","(at4g34880 : 108.0) Amidase family protein; FUNCTIONS IN: amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: acrylonitrile catabolic process, aldoxime metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: Amidase family protein (TAIR:AT5G07360.2); Has 15395 Blast hits to 15313 proteins in 2409 species: Archae - 237; Bacteria - 9126; Metazoa - 385; Fungi - 509; Plants - 293; Viruses - 0; Other Eukaryotes - 4845 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)","protein_coding" "Kfl00157_0170","kfl00157_0170_v1.1","Klebsormidium nitens","(at5g08160 : 338.0) Encodes a serine/threonine protein kinase.; serine/threonine protein kinase 3 (PK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G32850.2); Has 37972 Blast hits to 37793 proteins in 1677 species: Archae - 67; Bacteria - 5765; Metazoa - 14817; Fungi - 4512; Plants - 5796; Viruses - 46; Other Eukaryotes - 6969 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description)","protein_coding" "Kfl00158_0010","kfl00158_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00158_0150","kfl00158_0150_v1.1","Klebsormidium nitens","(at3g60190 : 839.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (reliability: 1578.0) & (original description: no original description)","protein_coding" "Kfl00162_0080","kfl00162_0080_v1.1","Klebsormidium nitens","(p37116|ncpr_phaau : 203.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 186.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (reliability: 372.0) & (original description: no original description)","protein_coding" "Kfl00164_0120","kfl00164_0120_v1.1","Klebsormidium nitens","(at1g08090 : 498.0) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.; nitrate transporter 2:1 (NRT2:1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2.2 (TAIR:AT1G08100.1); Has 5150 Blast hits to 5022 proteins in 1376 species: Archae - 45; Bacteria - 4402; Metazoa - 22; Fungi - 274; Plants - 247; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (reliability: 996.0) & (original description: no original description)","protein_coding" "Kfl00165_0060","kfl00165_0060_v1.1","Klebsormidium nitens","(at5g54240 : 154.0) Protein of unknown function (DUF1223); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1223 (InterPro:IPR010634); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1223) (TAIR:AT4G27350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)","protein_coding" "Kfl00184_0240","kfl00184_0240_v1.1","Klebsormidium nitens","(at5g16010 : 182.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "Kfl00191_0080","kfl00191_0080_v1.1","Klebsormidium nitens","(at1g65230 : 233.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description)","protein_coding" "Kfl00192_0180","kfl00192_0180_v1.1","Klebsormidium nitens","(at4g31200 : 236.0) SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 472.0) & (original description: no original description)","protein_coding" "Kfl00194_0020","kfl00194_0020_v1.1","Klebsormidium nitens","(at4g25850 : 221.0) OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1). & (reliability: 442.0) & (original description: no original description)","protein_coding" "Kfl00202_0070","kfl00202_0070_v1.1","Klebsormidium nitens","(at2g15620 : 743.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (p05314|nir_spiol : 741.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (reliability: 1486.0) & (original description: no original description)","protein_coding" "Kfl00202_0080","kfl00202_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00203_0060","kfl00203_0060_v1.1","Klebsormidium nitens","(at5g23130 : 84.3) Peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell wall macromolecule catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482); BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT5G08200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)","protein_coding" "Kfl00211_0170","kfl00211_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00212_0030","kfl00212_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00213_0080","kfl00213_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00215_0250","kfl00215_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00218_0180","kfl00218_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00225_0190","kfl00225_0190_v1.1","Klebsormidium nitens","(at3g18440 : 241.0) Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.; aluminum-activated malate transporter 9 (ALMT9); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G18420.1); Has 814 Blast hits to 808 proteins in 259 species: Archae - 0; Bacteria - 440; Metazoa - 0; Fungi - 20; Plants - 338; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "Kfl00228_0150","kfl00228_0150_v1.1","Klebsormidium nitens","(at2g35840 : 301.0) Sucrose-6F-phosphate phosphohydrolase family protein; FUNCTIONS IN: phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity; INVOLVED IN: sucrose biosynthetic process; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Sucrose phosphatase, plant/cyanobacteria (InterPro:IPR012847), Sucrose-phosphate phosphatase (InterPro:IPR006378); BEST Arabidopsis thaliana protein match is: sucrose-phosphatase 1 (TAIR:AT1G51420.1). & (reliability: 602.0) & (original description: no original description)","protein_coding" "Kfl00231_0080","kfl00231_0080_v1.1","Klebsormidium nitens","(at5g09650 : 351.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (q93y52|ipyr1_chlre : 293.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (reliability: 702.0) & (original description: no original description)","protein_coding" "Kfl00236_0070","kfl00236_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00244_0030","kfl00244_0030_v1.1","Klebsormidium nitens","(at2g13360 : 577.0) Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.; alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (reliability: 1154.0) & (original description: no original description)","protein_coding" "Kfl00247_0100","kfl00247_0100_v1.1","Klebsormidium nitens","(at5g40660 : 181.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)","protein_coding" "Kfl00247_g9","kfl00247_g9_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00250_0020","kfl00250_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00251_0060","kfl00251_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00257_0180","kfl00257_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00260_0180","kfl00260_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00260_0190","kfl00260_0190_v1.1","Klebsormidium nitens","(o24047|mdhc_mescr : 508.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Mesembryanthemum crystallinum (Common ice plant) & (at1g04410 : 503.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 1006.0) & (original description: no original description)","protein_coding" "Kfl00264_0120","kfl00264_0120_v1.1","Klebsormidium nitens","(at2g19600 : 326.0) member of Putative potassium proton antiporter family; K+ efflux antiporter 4 (KEA4); FUNCTIONS IN: potassium:hydrogen antiporter activity, potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: K+ efflux antiporter 6 (TAIR:AT5G11800.1); Has 10410 Blast hits to 10396 proteins in 2139 species: Archae - 355; Bacteria - 8476; Metazoa - 71; Fungi - 61; Plants - 415; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink). & (reliability: 652.0) & (original description: no original description)","protein_coding" "Kfl00269_0020","kfl00269_0020_v1.1","Klebsormidium nitens","(at1g52230 : 106.0) photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o65101|psah_maize : 106.0) Photosystem I reaction center subunit VI, chloroplast precursor (PSI-H) (Light-harvesting complex I 11 kDa protein) - Zea mays (Maize) & (reliability: 212.0) & (original description: no original description)","protein_coding" "Kfl00289_0020","kfl00289_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00291_0100","kfl00291_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00292_0160","kfl00292_0160_v1.1","Klebsormidium nitens","(at4g14500 : 197.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G23080.1); Has 214 Blast hits to 213 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)","protein_coding" "Kfl00296_0030","kfl00296_0030_v1.1","Klebsormidium nitens","(at1g54520 : 213.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)","protein_coding" "Kfl00298_0090","kfl00298_0090_v1.1","Klebsormidium nitens","(at3g61750 : 105.0) Cytochrome b561/ferric reductase transmembrane with DOMON related domain; FUNCTIONS IN: dopamine beta-monooxygenase activity; INVOLVED IN: histidine catabolic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G07570.1); Has 634 Blast hits to 633 proteins in 115 species: Archae - 2; Bacteria - 2; Metazoa - 111; Fungi - 103; Plants - 398; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "Kfl00298_0120","kfl00298_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00316_0100","kfl00316_0100_v1.1","Klebsormidium nitens","(at2g20570 : 171.0) Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1). & (reliability: 342.0) & (original description: no original description)","protein_coding" "Kfl00323_0120","kfl00323_0120_v1.1","Klebsormidium nitens","(at5g35970 : 675.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 6377 Blast hits to 5712 proteins in 1082 species: Archae - 188; Bacteria - 2376; Metazoa - 1211; Fungi - 1055; Plants - 600; Viruses - 0; Other Eukaryotes - 947 (source: NCBI BLink). & (reliability: 1350.0) & (original description: no original description)","protein_coding" "Kfl00339_0160","kfl00339_0160_v1.1","Klebsormidium nitens","(at1g10290 : 615.0) involved in trafficking from the trans-Golgi Network to the central vacuole.; dynamin-like protein 6 (ADL6); FUNCTIONS IN: GTPase activity; INVOLVED IN: Golgi to vacuole transport; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Pleckstrin homology-type (InterPro:IPR011993), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: dynamin-like 3 (TAIR:AT1G59610.1); Has 3284 Blast hits to 3098 proteins in 352 species: Archae - 4; Bacteria - 126; Metazoa - 1435; Fungi - 709; Plants - 704; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (reliability: 1230.0) & (original description: no original description)","protein_coding" "Kfl00340_0040","kfl00340_0040_v1.1","Klebsormidium nitens","(at5g60540 : 223.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description)","protein_coding" "Kfl00342_0120","kfl00342_0120_v1.1","Klebsormidium nitens","(at1g12600 : 405.0) UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 2 (TAIR:AT4G23010.1); Has 1283 Blast hits to 1283 proteins in 272 species: Archae - 2; Bacteria - 86; Metazoa - 575; Fungi - 206; Plants - 224; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)","protein_coding" "Kfl00353_0040","kfl00353_0040_v1.1","Klebsormidium nitens","(at2g29050 : 206.0) RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)","protein_coding" "Kfl00361_0060","kfl00361_0060_v1.1","Klebsormidium nitens","(at5g45410 : 160.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)","protein_coding" "Kfl00371_0020","kfl00371_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00371_0100","kfl00371_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00371_0150","kfl00371_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00378_0060","kfl00378_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00379_0090","kfl00379_0090_v1.1","Klebsormidium nitens","(at1g64140 : 441.0) BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 882.0) & (original description: no original description)","protein_coding" "Kfl00387_0110","kfl00387_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00395_0080","kfl00395_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00400_0020","kfl00400_0020_v1.1","Klebsormidium nitens","(at5g40850 : 395.0) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.; urophorphyrin methylase 1 (UPM1); CONTAINS InterPro DOMAIN/s: Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uroporphyrin-III C-methyltransferase, C-terminal (InterPro:IPR006366), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776), Uroporphiryn-III C-methyltransferase, conserved site (InterPro:IPR003043). & (reliability: 790.0) & (original description: no original description)","protein_coding" "Kfl00407_0120","kfl00407_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00413_0010","kfl00413_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00416_0100","kfl00416_0100_v1.1","Klebsormidium nitens","(q03684|bip4_tobac : 984.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 972.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (reliability: 1944.0) & (original description: no original description)","protein_coding" "Kfl00426_0020","kfl00426_0020_v1.1","Klebsormidium nitens","(at3g48070 : 104.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G62910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "Kfl00428_0100","kfl00428_0100_v1.1","Klebsormidium nitens","(at1g20880 : 155.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1). & (q03878|grp1_dauca : 82.8) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (reliability: 310.0) & (original description: no original description)","protein_coding" "Kfl00428_g10","kfl00428_g10_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00429_0060","kfl00429_0060_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00429_0065","kfl00429_0065_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00438_0080","kfl00438_0080_v1.1","Klebsormidium nitens","(at4g34310 : 322.0) alpha/beta-Hydrolases superfamily protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 644.0) & (original description: no original description)","protein_coding" "Kfl00449_0070","kfl00449_0070_v1.1","Klebsormidium nitens","(at3g63410 : 441.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (p23525|in37_spiol : 439.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (reliability: 882.0) & (original description: no original description)","protein_coding" "Kfl00460_0030","kfl00460_0030_v1.1","Klebsormidium nitens","(q02028|hsp7s_pea : 999.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (at5g49910 : 978.0) Stromal heat shock protein involved in protein import into chloroplast.; chloroplast heat shock protein 70-2 (CPHSC70-2EAT SHOCK PROTEIN 70-2); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to heat; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-1 (TAIR:AT4G24280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1956.0) & (original description: no original description)","protein_coding" "Kfl00466_0070","kfl00466_0070_v1.1","Klebsormidium nitens","(at2g22360 : 447.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (q04960|dnjh_cucsa : 166.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 894.0) & (original description: no original description)","protein_coding" "Kfl00468_0020","kfl00468_0020_v1.1","Klebsormidium nitens","(p80471|lipc_soltu : 276.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g22240 : 270.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)","protein_coding" "Kfl00474_0080","kfl00474_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00477_0020","kfl00477_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00506_0010","kfl00506_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00511_0100","kfl00511_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00531_0060","kfl00531_0060_v1.1","Klebsormidium nitens","(at3g11670 : 597.0) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).; DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 183 Blast hits to 183 proteins in 35 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (q6dw74|dgdg1_lotja : 593.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (reliability: 1194.0) & (original description: no original description)","protein_coding" "Kfl00536_0060","kfl00536_0060_v1.1","Klebsormidium nitens","(at2g01650 : 220.0) encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.; plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description)","protein_coding" "Kfl00561_0030","kfl00561_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00573_0020","kfl00573_0020_v1.1","Klebsormidium nitens","(at5g07470 : 299.0) ubiquitous enzyme that repairs oxidatively damaged proteins; peptidemethionine sulfoxide reductase 3 (PMSR3); CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9sec2|msra_lacsa : 298.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (reliability: 598.0) & (original description: no original description)","protein_coding" "Kfl00601_0010","kfl00601_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00603_0060","kfl00603_0060_v1.1","Klebsormidium nitens","(at2g31955 : 481.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (reliability: 962.0) & (original description: no original description)","protein_coding" "Kfl00605_0080","kfl00605_0080_v1.1","Klebsormidium nitens","(at5g46800 : 367.0) Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein; A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 734.0) & (original description: no original description)","protein_coding" "Kfl00621_0040","kfl00621_0040_v1.1","Klebsormidium nitens","(at1g25540 : 97.8) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.; PHYTOCHROME AND FLOWERING TIME 1 (PFT1); FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: in 8 processes; LOCATED IN: mediator complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med25, von Willebrand factor type A (InterPro:IPR021419); Has 143907 Blast hits to 47238 proteins in 2114 species: Archae - 36; Bacteria - 15136; Metazoa - 49480; Fungi - 14034; Plants - 10447; Viruses - 822; Other Eukaryotes - 53952 (source: NCBI BLink). & (reliability: 195.6) & (original description: no original description)","protein_coding" "Kfl00652_0030","kfl00652_0030_v1.1","Klebsormidium nitens","(at1g35710 : 155.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G08850.1); Has 304074 Blast hits to 147448 proteins in 4766 species: Archae - 178; Bacteria - 29187; Metazoa - 106993; Fungi - 12531; Plants - 120860; Viruses - 430; Other Eukaryotes - 33895 (source: NCBI BLink). & (p93194|rpk1_iponi : 130.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 310.0) & (original description: no original description)","protein_coding" "Kfl00678_0080","kfl00678_0080_v1.1","Klebsormidium nitens","(q8vyx2|akt1_orysa : 272.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (at5g37500 : 268.0) Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)","protein_coding" "Kfl00692_0020","kfl00692_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00696_0080","kfl00696_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00698_0020","kfl00698_0020_v1.1","Klebsormidium nitens","(at3g01910 : 230.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p27968|nia7_horvu : 200.0) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) - Hordeum vulgare (Barley) & (reliability: 460.0) & (original description: no original description)","protein_coding" "Kfl00701_0030","kfl00701_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00701_0040","kfl00701_0040_v1.1","Klebsormidium nitens","(at3g56140 : 563.0) Protein of unknown function (DUF399 and DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 (InterPro:IPR007314), Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 538 Blast hits to 538 proteins in 131 species: Archae - 0; Bacteria - 182; Metazoa - 33; Fungi - 6; Plants - 279; Viruses - 6; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 1126.0) & (original description: no original description)","protein_coding" "Kfl00782_0030","kfl00782_0030_v1.1","Klebsormidium nitens","(q7xqp4|sapk7_orysa : 173.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (at5g63650 : 169.0) encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.; SNF1-related protein kinase 2.5 (SNRK2.5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 132292 Blast hits to 116481 proteins in 3406 species: Archae - 169; Bacteria - 13418; Metazoa - 52934; Fungi - 13701; Plants - 25794; Viruses - 1077; Other Eukaryotes - 25199 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "Kfl00788_0020","kfl00788_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00797_0010","kfl00797_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00798_0070","kfl00798_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00818_0030","kfl00818_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00873_0030","kfl00873_0030_v1.1","Klebsormidium nitens","(at5g50210 : 619.0) Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.; quinolinate synthase (QS); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), Quinolinate synthetase A (InterPro:IPR003473); BEST Arabidopsis thaliana protein match is: sulfur E2 (TAIR:AT1G67810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1238.0) & (original description: no original description)","protein_coding" "Kfl00891_0050","kfl00891_0050_v1.1","Klebsormidium nitens","(p39867|nia1_brana : 986.0) Nitrate reductase [NADH], clone PBNBR1405 (EC 1.7.1.1) (NR) - Brassica napus (Rape) & (at1g77760 : 974.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1948.0) & (original description: no original description)","protein_coding" "Kfl00895_0020","kfl00895_0020_v1.1","Klebsormidium nitens","(q40412|aba2_nicpl : 582.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g67030 : 558.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (reliability: 1116.0) & (original description: no original description)","protein_coding" "Kfl00922_0040","kfl00922_0040_v1.1","Klebsormidium nitens","(at1g56500 : 1012.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: metabolic process, cell redox homeostasis; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Low-density lipoprotein receptor, class B (YWTD) repeat (InterPro:IPR000033), Thioredoxin fold (InterPro:IPR012335), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Thioredoxin-like (InterPro:IPR017936), NHL repeat (InterPro:IPR001258), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT3G07060.1); Has 23445 Blast hits to 20574 proteins in 2565 species: Archae - 340; Bacteria - 17044; Metazoa - 1036; Fungi - 332; Plants - 721; Viruses - 3; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 2024.0) & (original description: no original description)","protein_coding" "Kfl00960_0020","kfl00960_0020_v1.1","Klebsormidium nitens","(at5g35690 : 87.0) CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "Kfl01057_0030","kfl01057_0030_v1.1","Klebsormidium nitens","(q01297|cata1_ricco : 422.0) Catalase isozyme 1 (EC 1.11.1.6) - Ricinus communis (Castor bean) & (at1g20630 : 417.0) Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.; catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 834.0) & (original description: no original description)","protein_coding" "Kfl01397_0010","kfl01397_0010_v1.1","Klebsormidium nitens","(at4g26850 : 433.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 866.0) & (original description: no original description)","protein_coding" "Kfl01436_0015","kfl01436_0015_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g03730","No alias","Oryza sativa","nuclease PA3, putative, expressed","protein_coding" "LOC_Os01g04250","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g05080","No alias","Oryza sativa","thylakoid lumenal protein, putative, expressed","protein_coding" "LOC_Os01g05310","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g05560","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g06040","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g07370","No alias","Oryza sativa","KIP1, putative, expressed","protein_coding" "LOC_Os01g09640","No alias","Oryza sativa","Myb transcription factor, putative, expressed","protein_coding" "LOC_Os01g09890","No alias","Oryza sativa","translation initiation factor SUI1, putative, expressed","protein_coding" "LOC_Os01g12030","No alias","Oryza sativa","endoglucanase precursor, putative, expressed","protein_coding" "LOC_Os01g12750","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding" "LOC_Os01g13390","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g17240","No alias","Oryza sativa","transporter, major facilitator family, putative, expressed","protein_coding" "LOC_Os01g22010","No alias","Oryza sativa","S-adenosylmethionine synthetase, putative, expressed","protein_coding" "LOC_Os01g22510","No alias","Oryza sativa","cyclase/dehydrase family protein, expressed","protein_coding" "LOC_Os01g27520","No alias","Oryza sativa","tRNA synthetases class II domain containing protein, expressed","protein_coding" "LOC_Os01g32460","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g33030","No alias","Oryza sativa","Brix domain containing protein, putative, expressed","protein_coding" "LOC_Os01g33450","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g43870","No alias","Oryza sativa","NLI interacting factor-like phosphatase, putative, expressed","protein_coding" "LOC_Os01g47630","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g50616","No alias","Oryza sativa","phosphatidylinositol transfer, putative, expressed","protein_coding" "LOC_Os01g51920","No alias","Oryza sativa","phosphotransferase, putative, expressed","protein_coding" "LOC_Os01g52530","No alias","Oryza sativa","phosphoribosyl transferase, putative, expressed","protein_coding" "LOC_Os01g53010","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os01g55050","No alias","Oryza sativa","protein of unknown function DUF1421 domain containing protein, expressed","protein_coding" "LOC_Os01g56450","No alias","Oryza sativa","DUF567 domain containing protein, putative, expressed","protein_coding" "LOC_Os01g56890","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g57560","No alias","Oryza sativa","serine/threonine-protein kinase receptor precursor, putative, expressed","protein_coding" "LOC_Os01g57870","No alias","Oryza sativa","disease resistance protein RPS2, putative, expressed","protein_coding" "LOC_Os01g59100","No alias","Oryza sativa","cytokinin-N-glucosyltransferase 1, putative, expressed","protein_coding" "LOC_Os01g60870","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g61400","No alias","Oryza sativa","sufB/sufD domain containing protein, putative, expressed","protein_coding" "LOC_Os01g66330","No alias","Oryza sativa","ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed","protein_coding" "LOC_Os01g72650","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding" "LOC_Os01g72930","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding" "LOC_Os01g73500","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g01380","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g02470","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed","protein_coding" "LOC_Os02g04460","No alias","Oryza sativa","ribosomal protein L3, putative, expressed","protein_coding" "LOC_Os02g06430","No alias","Oryza sativa","DUF292 domain containing protein, expressed","protein_coding" "LOC_Os02g06720","No alias","Oryza sativa","WD domain containing protein, putative, expressed","protein_coding" "LOC_Os02g09940","No alias","Oryza sativa","peroxiredoxin, putative, expressed","protein_coding" "LOC_Os02g10900","No alias","Oryza sativa","NB-ARC domain containing protein, expressed","protein_coding" "LOC_Os02g15400","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os02g19990","No alias","Oryza sativa","reticulon domain containing protein, putative, expressed","protein_coding" "LOC_Os02g26430","No alias","Oryza sativa","WRKY42, expressed","protein_coding" "LOC_Os02g28110","No alias","Oryza sativa","ornithine decarboxylase, putative, expressed","protein_coding" "LOC_Os02g32450","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g32760","No alias","Oryza sativa","60S acidic ribosomal protein, putative, expressed","protein_coding" "LOC_Os02g32860","No alias","Oryza sativa","poly synthetase 3, putative, expressed","protein_coding" "LOC_Os02g34940","No alias","Oryza sativa","OsPDIL1-3 protein disulfide isomerase PDIL1-3, expressed","protein_coding" "LOC_Os02g36450","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding" "LOC_Os02g36570","No alias","Oryza sativa","ABC1 family domain containing protein, putative, expressed","protein_coding" "LOC_Os02g37654","No alias","Oryza sativa","lecithin:cholesterol acyltransferase, putative, expressed","protein_coding" "LOC_Os02g39360","No alias","Oryza sativa","B-box zinc finger family protein, putative, expressed","protein_coding" "LOC_Os02g39384","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g39600","No alias","Oryza sativa","outer envelope protein, putative, expressed","protein_coding" "LOC_Os02g39950","No alias","Oryza sativa","EF hand family protein, putative, expressed","protein_coding" "LOC_Os02g43370","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os02g48770","No alias","Oryza sativa","SAM dependent carboxyl methyltransferase, putative, expressed","protein_coding" "LOC_Os02g51030","No alias","Oryza sativa","methyltransferase domain containing protein, putative, expressed","protein_coding" "LOC_Os02g51310","No alias","Oryza sativa","TCP family transcription factor, putative, expressed","protein_coding" "LOC_Os02g51740","No alias","Oryza sativa","VQ domain containing protein, putative, expressed","protein_coding" "LOC_Os02g53130","No alias","Oryza sativa","nitrate reductase, putative, expressed","protein_coding" "LOC_Os02g54590","No alias","Oryza sativa","serine threonine kinase, putative, expressed","protein_coding" "LOC_Os02g56040","No alias","Oryza sativa","chaperone protein dnaJ, putative, expressed","protein_coding" "LOC_Os02g58270","No alias","Oryza sativa","metallo-beta-lactamase family protein, putative, expressed","protein_coding" "LOC_Os02g58310","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g03790","No alias","Oryza sativa","AMP-binding domain containing protein, expressed","protein_coding" "LOC_Os03g04110","No alias","Oryza sativa","lysM domain-containing GPI-anchored protein precursor, putative, expressed","protein_coding" "LOC_Os03g04440","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g05870","No alias","Oryza sativa","Fe-S metabolism associated domain containing protein, expressed","protein_coding" "LOC_Os03g06290","No alias","Oryza sativa","OsSub27 - Putative Subtilisin homologue, expressed","protein_coding" "LOC_Os03g07960","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g09250","No alias","Oryza sativa","inositol-3-phosphate synthase, putative, expressed","protein_coding" "LOC_Os03g10180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g10190","No alias","Oryza sativa","seryl-tRNA synthetase, putative, expressed","protein_coding" "LOC_Os03g12660","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding" "LOC_Os03g14900","No alias","Oryza sativa","NB-ARC/LRR disease resistance protein, putative, expressed","protein_coding" "LOC_Os03g15810","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding" "LOC_Os03g19600","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os03g22010","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding" "LOC_Os03g23980","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family protein, putative, expressed","protein_coding" "LOC_Os03g24910","No alias","Oryza sativa","nodulation protein-related, putative, expressed","protein_coding" "LOC_Os03g25330","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding" "LOC_Os03g25940","No alias","Oryza sativa","cystathionine gamma-synthase, putative, expressed","protein_coding" "LOC_Os03g31110","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os03g31570","No alias","Oryza sativa","proline-rich family protein, putative, expressed","protein_coding" "LOC_Os03g37878","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g41419","No alias","Oryza sativa","serpin domain containing protein, putative, expressed","protein_coding" "LOC_Os03g49630","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g50620","No alias","Oryza sativa","ATP binding protein, putative, expressed","protein_coding" "LOC_Os03g50630","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g53200","No alias","Oryza sativa","OsCML4 - Calmodulin-related calcium sensor protein, expressed","protein_coding" "LOC_Os03g54130","No alias","Oryza sativa","cysteine protease 1 precursor, putative, expressed","protein_coding" "LOC_Os03g55110","No alias","Oryza sativa","26S proteasome non-ATPase regulatory subunit 10, putative, expressed","protein_coding" "LOC_Os03g55340","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding" "LOC_Os03g58300","No alias","Oryza sativa","indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os03g59080","No alias","Oryza sativa","AMP-binding enzyme, putative, expressed","protein_coding" "LOC_Os03g59210","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g59320","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g60620","No alias","Oryza sativa","DnaK family protein, putative, expressed","protein_coding" "LOC_Os03g60820","No alias","Oryza sativa","transporter, major facilitator superfamily domain containing protein, expressed","protein_coding" "LOC_Os03g61680","No alias","Oryza sativa","huntingtin-interacting protein HYPK, putative, expressed","protein_coding" "LOC_Os03g61890","No alias","Oryza sativa","chloroplast protein import component Toc159, putative, expressed","protein_coding" "LOC_Os04g01140","No alias","Oryza sativa","cytochrome P450 93A2, putative, expressed","protein_coding" "LOC_Os04g03810","No alias","Oryza sativa","OsSub38 - Putative Subtilisin homologue, expressed","protein_coding" "LOC_Os04g08010","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g15600","No alias","Oryza sativa","receptor kinase, putative, expressed","protein_coding" "LOC_Os04g21350","No alias","Oryza sativa","flowering promoting factor-like 1, putative, expressed","protein_coding" "LOC_Os04g24220","No alias","Oryza sativa","OsWAK32 - OsWAK receptor-like protein kinase, expressed","protein_coding" "LOC_Os04g33260","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g34510","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g37550","No alias","Oryza sativa","aspartic proteinase nepenthesin-2 precursor, putative, expressed","protein_coding" "LOC_Os04g37710","No alias","Oryza sativa","serine hydrolase domain containing protein, expressed","protein_coding" "LOC_Os04g38420","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed","protein_coding" "LOC_Os04g38450","No alias","Oryza sativa","gamma-glutamyltranspeptidase 1 precursor, putative, expressed","protein_coding" "LOC_Os04g39840","No alias","Oryza sativa","Os4bglu10 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed","protein_coding" "LOC_Os04g41160","No alias","Oryza sativa","protein kinase, putative, expressed","protein_coding" "LOC_Os04g41630","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g42784","No alias","Oryza sativa","DNA mismatch repair protein, putative, expressed","protein_coding" "LOC_Os04g46560","No alias","Oryza sativa","lactate/malate dehydrogenase, putative, expressed","protein_coding" "LOC_Os04g47770","No alias","Oryza sativa","cis-zeatin O-glucosyltransferase, putative, expressed","protein_coding" "LOC_Os04g48840","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g52530","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding" "LOC_Os04g53510","No alias","Oryza sativa","OsFBL20 - F-box domain and LRR containing protein, expressed","protein_coding" "LOC_Os04g57210","No alias","Oryza sativa","actin-6, putative, expressed","protein_coding" "LOC_Os04g57870","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g58280","No alias","Oryza sativa","stem-specific protein TSJT1, putative, expressed","protein_coding" "LOC_Os04g59200","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding" "LOC_Os04g59340","No alias","Oryza sativa","RNA-binding region RNP-1, putative, expressed","protein_coding" "LOC_Os04g59440","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding" "LOC_Os05g01470","No alias","Oryza sativa","methionine S-methyltransferase, putative, expressed","protein_coding" "LOC_Os05g01570","No alias","Oryza sativa","auxin-induced protein 5NG4, putative, expressed","protein_coding" "LOC_Os05g03960","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g06180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g06890","No alias","Oryza sativa","relA-SpoT like protein RSH4, putative, expressed","protein_coding" "LOC_Os05g15510","No alias","Oryza sativa","cellulase, putative, expressed","protein_coding" "LOC_Os05g26890","No alias","Oryza sativa","G-protein alpha subunit, putative, expressed","protein_coding" "LOC_Os05g27780","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g28210","No alias","Oryza sativa","small hydrophilic plant seed protein, putative, expressed","protein_coding" "LOC_Os05g31650","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g33570","No alias","Oryza sativa","pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os05g33840","No alias","Oryza sativa","transketolase, putative, expressed","protein_coding" "LOC_Os05g34580","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os05g40260","No alias","Oryza sativa","acetyltransferase, GNAT family, putative, expressed","protein_coding" "LOC_Os05g43450","No alias","Oryza sativa","transcription initiation factor IIF beta subunit, putative, expressed","protein_coding" "LOC_Os05g43460","No alias","Oryza sativa","DUF567 domain containing protein, putative, expressed","protein_coding" "LOC_Os05g45080","No alias","Oryza sativa","anthocyanidin 5,3-O-glucosyltransferase, putative, expressed","protein_coding" "LOC_Os05g46000","No alias","Oryza sativa","ras-related protein, putative, expressed","protein_coding" "LOC_Os05g49300","No alias","Oryza sativa","iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed","protein_coding" "LOC_Os06g03550","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os06g04734","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g05700","No alias","Oryza sativa","cysteine synthase, putative, expressed","protein_coding" "LOC_Os06g10650","No alias","Oryza sativa","tyrosine phosphatase family protein, putative, expressed","protein_coding" "LOC_Os06g11240","No alias","Oryza sativa","12-oxophytodienoate reductase, putative, expressed","protein_coding" "LOC_Os06g11290","No alias","Oryza sativa","12-oxophytodienoate reductase, putative, expressed","protein_coding" "LOC_Os06g11400","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g12500","No alias","Oryza sativa","membrane associated DUF588 domain containing protein, putative, expressed","protein_coding" "LOC_Os06g12600","No alias","Oryza sativa","kinase, pfkB family, putative, expressed","protein_coding" "LOC_Os06g13000","No alias","Oryza sativa","ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os06g16140","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g19070","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding" "LOC_Os06g24190","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g24704","No alias","Oryza sativa","acyl-coenzyme A oxidase, putative, expressed","protein_coding" "LOC_Os06g38450","No alias","Oryza sativa","vignain precursor, putative, expressed","protein_coding" "LOC_Os06g43510","No alias","Oryza sativa","cytochrome P450 71D6, putative, expressed","protein_coding" "LOC_Os06g48740","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g48960","No alias","Oryza sativa","AIG2-like family domain containing protein, expressed","protein_coding" "LOC_Os06g49110","No alias","Oryza sativa","delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os06g51260","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding" "LOC_Os07g03820","No alias","Oryza sativa","lectin-like receptor kinase, putative, expressed","protein_coding" "LOC_Os07g06880","No alias","Oryza sativa","gibberellin receptor GID1L2, putative, expressed","protein_coding" "LOC_Os07g10400","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding" "LOC_Os07g13940","No alias","Oryza sativa","cytokinin-N-glucosyltransferase 1, putative, expressed","protein_coding" "LOC_Os07g15090","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os07g26660","No alias","Oryza sativa","aquaporin protein, putative, expressed","protein_coding" "LOC_Os07g26690","No alias","Oryza sativa","aquaporin protein, putative, expressed","protein_coding" "LOC_Os07g32570","No alias","Oryza sativa","OsAPRL1 adenosine 5'-phosphosulfate reductase-like OsAPRL1, expressed","protein_coding" "LOC_Os07g32620","No alias","Oryza sativa","anthocyanidin 5,3-O-glucosyltransferase, putative, expressed","protein_coding" "LOC_Os07g36170","No alias","Oryza sativa","chitin-inducible gibberellin-responsive protein, putative, expressed","protein_coding" "LOC_Os07g37454","No alias","Oryza sativa","urate anion exchanger, putative, expressed","protein_coding" "LOC_Os07g42520","No alias","Oryza sativa","dirigent, putative, expressed","protein_coding" "LOC_Os07g43940","No alias","Oryza sativa","X8 domain containing protein, expressed","protein_coding" "LOC_Os07g44000","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g44290","No alias","Oryza sativa","CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding" "LOC_Os08g01670","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding" "LOC_Os08g01870","No alias","Oryza sativa","Rf1, mitochondrial precursor, putative, expressed","protein_coding" "LOC_Os08g01940","No alias","Oryza sativa","non-lysosomal glucosylceramidase, putative, expressed","protein_coding" "LOC_Os08g06630","No alias","Oryza sativa","RNA polymerase sigma factor, putative, expressed","protein_coding" "LOC_Os08g13000","No alias","Oryza sativa","MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed","protein_coding" "LOC_Os08g14190","No alias","Oryza sativa","flavonol sulfotransferase, putative, expressed","protein_coding" "LOC_Os08g15500","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g15650","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g16600","No alias","Oryza sativa","WD-40 repeat protein family, putative, expressed","protein_coding" "LOC_Os08g20670","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os08g20730","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding" "LOC_Os08g23870","No alias","Oryza sativa","late embryogenesis abundant group 1, putative, expressed","protein_coding" "LOC_Os08g24610","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g25420","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g26460","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g26490","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g28930","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os08g31980","No alias","Oryza sativa","trehalose-6-phosphate synthase, putative, expressed","protein_coding" "LOC_Os08g34210","No alias","Oryza sativa","aldehyde dehydrogenase, putative, expressed","protein_coding" "LOC_Os08g36480","No alias","Oryza sativa","nitrate reductase, putative, expressed","protein_coding" "LOC_Os08g36500","No alias","Oryza sativa","nitrate reductase, putative, expressed","protein_coding" "LOC_Os08g39980","No alias","Oryza sativa","DNA-binding bromodomain-containing protein, putative, expressed","protein_coding" "LOC_Os08g41830","No alias","Oryza sativa","sulfite oxidase, putative, expressed","protein_coding" "LOC_Os08g43280","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g44180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g45190","No alias","Oryza sativa","PGR5, putative, expressed","protein_coding" "LOC_Os09g04990","No alias","Oryza sativa","cytoskeletal protein, putative, expressed","protein_coding" "LOC_Os09g06499","No alias","Oryza sativa","sulfate transporter 4.1, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os09g09510","No alias","Oryza sativa","legume lectins beta domain containing protein, expressed","protein_coding" "LOC_Os09g10180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g10204","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g11460","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding" "LOC_Os09g11480","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding" "LOC_Os09g12540","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding" "LOC_Os09g13040","No alias","Oryza sativa","plant protein of unknown function domain containing protein, expressed","protein_coding" "LOC_Os09g23350","No alias","Oryza sativa","trehalose synthase, putative, expressed","protein_coding" "LOC_Os09g23740","No alias","Oryza sativa","1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed","protein_coding" "LOC_Os09g27010","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding" "LOC_Os09g27040","No alias","Oryza sativa","GEX1, putative, expressed","protein_coding" "LOC_Os09g27050","No alias","Oryza sativa","HD domain containing protein, putative, expressed","protein_coding" "LOC_Os09g28510","No alias","Oryza sativa","EF hand family protein, putative, expressed","protein_coding" "LOC_Os09g31200","No alias","Oryza sativa","AN1-like zinc finger domain containing protein, expressed","protein_coding" "LOC_Os09g32380","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os09g33730","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g34230","No alias","Oryza sativa","UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed","protein_coding" "LOC_Os09g37710","No alias","Oryza sativa","NIN, putative, expressed","protein_coding" "LOC_Os09g38070","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g38090","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g38920","No alias","Oryza sativa","thiol protease SEN102 precursor, putative, expressed","protein_coding" "LOC_Os09g39540","No alias","Oryza sativa","40S ribosomal protein S25, putative, expressed","protein_coding" "LOC_Os10g02620","No alias","Oryza sativa","GAGA-binding protein, putative, expressed","protein_coding" "LOC_Os10g04470","No alias","Oryza sativa","conserved hypothetical protein","protein_coding" "LOC_Os10g04570","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g05780","No alias","Oryza sativa","POT domain containing peptide transporter, putative, expressed","protein_coding" "LOC_Os10g07548","No alias","Oryza sativa","wall-associated receptor kinase-like 4 precursor, putative, expressed","protein_coding" "LOC_Os10g11270","No alias","Oryza sativa","sulfotransferase domain containing protein, expressed","protein_coding" "LOC_Os10g18370","No alias","Oryza sativa","transcriptional regulator, putative, expressed","protein_coding" "LOC_Os10g25250","No alias","Oryza sativa","ZIM domain containing protein, putative, expressed","protein_coding" "LOC_Os10g25550","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding" "LOC_Os10g29810","No alias","Oryza sativa","MBTB58 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed","protein_coding" "LOC_Os10g30870","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g33540","No alias","Oryza sativa","alcohol oxidase, putative, expressed","protein_coding" "LOC_Os10g38610","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding" "LOC_Os10g39930","No alias","Oryza sativa","cytochrome P450 97B2, putative, expressed","protein_coding" "LOC_Os10g40250","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g41960","No alias","Oryza sativa","eukaryotic translation initiation factor 3 subunit B, putative, expressed","protein_coding" "LOC_Os10g42250","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g42900","No alias","Oryza sativa","peptide transporter PTR2, putative, expressed","protein_coding" "LOC_Os11g01590","No alias","Oryza sativa","nodulin, putative, expressed","protein_coding" "LOC_Os11g03390","No alias","Oryza sativa","FHA domain containing protein, putative, expressed","protein_coding" "LOC_Os11g03580","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g09020","No alias","Oryza sativa","amino acid transporter, putative, expressed","protein_coding" "LOC_Os11g09150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g09830","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g10980","No alias","Oryza sativa","pyruvate kinase, putative, expressed","protein_coding" "LOC_Os11g14630","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g25030","No alias","Oryza sativa","mitochondrial 2-oxoglutarate/malate translocator, putative, expressed","protein_coding" "LOC_Os11g26570","No alias","Oryza sativa","dehydrin, putative, expressed","protein_coding" "LOC_Os11g39670","No alias","Oryza sativa","seryl-tRNA synthetase, putative, expressed","protein_coding" "LOC_Os11g41010","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding" "LOC_Os11g44560","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding" "LOC_Os12g02980","No alias","Oryza sativa","nucleoside-triphosphatase, putative, expressed","protein_coding" "LOC_Os12g05590","No alias","Oryza sativa","RCN3 Centroradialis-like1 homogous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed","protein_coding" "LOC_Os12g06620","No alias","Oryza sativa","deoxyhypusine hydroxylase, putative, expressed","protein_coding" "LOC_Os12g06770","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os12g08090","No alias","Oryza sativa","amino acid transporter, putative, expressed","protein_coding" "LOC_Os12g12000","No alias","Oryza sativa","RALFL46 - Rapid ALkalinization Factor RALF family protein precursor, expressed","protein_coding" "LOC_Os12g12090","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g12130","No alias","Oryza sativa","verticillium wilt disease resistance protein, putative, expressed","protein_coding" "LOC_Os12g12934","No alias","Oryza sativa","peptide transporter PTR3-A, putative, expressed","protein_coding" "LOC_Os12g14840","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g15370","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g21798","No alias","Oryza sativa","40S ribosomal protein S3a, putative, expressed","protein_coding" "LOC_Os12g24510","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os12g25630","No alias","Oryza sativa","sulfite oxidase, putative, expressed","protein_coding" "LOC_Os12g28770","No alias","Oryza sativa","POEI19 - Pollen Ole e I allergen and extensin family protein precursor, expressed","protein_coding" "LOC_Os12g29740","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g32530","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g32760","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding" "LOC_Os12g34440","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g38051","No alias","Oryza sativa","metallothionein, putative, expressed","protein_coding" "LOC_Os12g38370","No alias","Oryza sativa","RALFL41 - Rapid ALkalinization Factor RALF family protein precursor, expressed","protein_coding" "MA_10117499g0010","No alias","Picea abies","(at3g07350 : 151.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)","protein_coding" "MA_101821g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_102043g0010","No alias","Picea abies","(at1g14870 : 164.0) PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "MA_10264739g0010","No alias","Picea abies","(p27788|fer3_maize : 177.0) Ferredoxin-3, chloroplast precursor (Ferredoxin III) (Fd III) - Zea mays (Maize) & (at2g27510 : 157.0) ferredoxin 3 (FD3); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 7538 Blast hits to 7536 proteins in 1339 species: Archae - 137; Bacteria - 5569; Metazoa - 7; Fungi - 12; Plants - 623; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 314.0) & (original description: no original description)","protein_coding" "MA_103336g0010","No alias","Picea abies","(at5g49890 : 780.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1560.0) & (original description: no original description)","protein_coding" "MA_10394193g0010","No alias","Picea abies","(at5g10695 : 87.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. & (reliability: 174.0) & (original description: no original description)","protein_coding" "MA_10426402g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10426802g0010","No alias","Picea abies","(at5g15330 : 250.0) SPX domain gene 4 (SPX4); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description)","protein_coding" "MA_10426811g0010","No alias","Picea abies","(at1g05200 : 243.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 208.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: no original description)","protein_coding" "MA_10427592g0020","No alias","Picea abies","(at2g15490 : 164.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (p56725|zox_phavu : 143.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 328.0) & (original description: no original description)","protein_coding" "MA_10428743g0010","No alias","Picea abies","(at2g36970 : 136.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "MA_10434647g0010","No alias","Picea abies","(at2g43760 : 170.0) molybdopterin biosynthesis MoaE family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molybdopterin biosynthesis MoaE (InterPro:IPR003448); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 340.0) & (original description: no original description)","protein_coding" "MA_10435959g0010","No alias","Picea abies","(at1g11050 : 483.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (q8lkz1|nork_pea : 229.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 966.0) & (original description: no original description)","protein_coding" "MA_10436010g0010","No alias","Picea abies","(at3g20810 : 216.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G19840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description)","protein_coding" "MA_10436939g0010","No alias","Picea abies","(q43793|g6pdc_tobac : 96.7) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g13110 : 87.8) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.; glucose-6-phosphate dehydrogenase 2 (G6PD2); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 3 (TAIR:AT1G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "MA_10447g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_105262g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_11258g0010","No alias","Picea abies","(at1g07030 : 346.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G30160.1); Has 27351 Blast hits to 14015 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 11451; Fungi - 7735; Plants - 5292; Viruses - 0; Other Eukaryotes - 2867 (source: NCBI BLink). & (p29518|bt1_maize : 104.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 692.0) & (original description: no original description)","protein_coding" "MA_121523g0010","No alias","Picea abies","(at1g66140 : 110.0) Encodes a zinc finger protein containing only a single zinc finger.; zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "MA_13827g0010","No alias","Picea abies","(at3g07350 : 155.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)","protein_coding" "MA_142030g0010","No alias","Picea abies","(p38500|nir_betve : 866.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (at2g15620 : 858.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (reliability: 1716.0) & (original description: no original description)","protein_coding" "MA_155905g0010","No alias","Picea abies","(at2g25680 : 334.0) Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium.; molybdate transporter 1 (MOT1); FUNCTIONS IN: molybdate ion transmembrane transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: molybdate ion transport; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: sulfate transmembrane transporters (TAIR:AT1G80310.1); Has 761 Blast hits to 750 proteins in 291 species: Archae - 26; Bacteria - 503; Metazoa - 6; Fungi - 58; Plants - 70; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 668.0) & (original description: no original description)","protein_coding" "MA_16264g0010","No alias","Picea abies","(at5g17210 : 129.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT1G61065.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "MA_16402g0010","No alias","Picea abies","(p39866|nia2_phavu : 985.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g37130 : 937.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (reliability: 1874.0) & (original description: no original description)","protein_coding" "MA_188288g0010","No alias","Picea abies","(at2g15620 : 239.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (q42997|nir_orysa : 238.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: no original description)","protein_coding" "MA_19639g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_225054g0010","No alias","Picea abies","(at1g72140 : 151.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22540.1); Has 7231 Blast hits to 7080 proteins in 1330 species: Archae - 0; Bacteria - 3541; Metazoa - 585; Fungi - 456; Plants - 2171; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)","protein_coding" "MA_22510g0010","No alias","Picea abies","(at2g15620 : 863.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (p38500|nir_betve : 861.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Betula verrucosa (White birch) (Betula pendula) & (reliability: 1726.0) & (original description: no original description)","protein_coding" "MA_240288g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_268229g0010","No alias","Picea abies","(at5g62720 : 199.0) Integral membrane HPP family protein; CONTAINS InterPro DOMAIN/s: HPP (InterPro:IPR007065); BEST Arabidopsis thaliana protein match is: Integral membrane HPP family protein (TAIR:AT3G47980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description)","protein_coding" "MA_29186g0010","No alias","Picea abies","(at4g36930 : 83.2) Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.; SPATULA (SPT); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "MA_2g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_31469g0020","No alias","Picea abies",""(at1g55940 : 128.0) member of CYP708A; ""cytochrome P450, family 708, subfamily A, polypeptide 1"" (CYP708A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, shoot, hypocotyl, root, leaf; EXPRESSED DURING: LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), Cytochrome P450 (InterPro:IPR001128), F-box associated interaction domain (InterPro:IPR017451), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 33156 Blast hits to 33083 proteins in 1720 species: Archae - 63; Bacteria - 6821; Metazoa - 10825; Fungi - 5863; Plants - 8109; Viruses - 6; Other Eukaryotes - 1469 (source: NCBI BLink). & (q8gsq1|c85a1_orysa : 128.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 256.0) & (original description: no original description)"","protein_coding" "MA_357447g0010","No alias","Picea abies","(at2g19130 : 514.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (p17801|kpro_maize : 195.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1028.0) & (original description: no original description)","protein_coding" "MA_37058g0010","No alias","Picea abies","(at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; TRANSPARENT TESTA 2 (TT2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 5 (TAIR:AT3G13540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p10290|mybc_maize : 155.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (reliability: 288.0) & (original description: no original description)","protein_coding" "MA_3776609g0010","No alias","Picea abies","(at3g23770 : 133.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G14080.1); Has 2823 Blast hits to 2749 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 32; Plants - 2780; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p07979|gub_nicpl : 90.9) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 266.0) & (original description: no original description)","protein_coding" "MA_41213g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_417126g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_4271g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_470779g0010","No alias","Picea abies","(at5g04770 : 551.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.; cationic amino acid transporter 6 (CAT6); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 7 (TAIR:AT3G10600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1102.0) & (original description: no original description)","protein_coding" "MA_473068g0010","No alias","Picea abies","(at4g34950 : 391.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16660.1); Has 3379 Blast hits to 3250 proteins in 882 species: Archae - 26; Bacteria - 1593; Metazoa - 4; Fungi - 302; Plants - 604; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 782.0) & (original description: no original description)","protein_coding" "MA_48561g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_48873g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_52212g0010","No alias","Picea abies","(at1g24620 : 127.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (p04352|calm_chlre : 90.5) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 254.0) & (original description: no original description)","protein_coding" "MA_5227g0030","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_53300g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_6561322g0010","No alias","Picea abies","(at3g07350 : 154.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)","protein_coding" "MA_6681g0010","No alias","Picea abies","(at3g47420 : 627.0) Encodes a Pi starvation-responsive protein AtPS3.; phosphate starvation-induced gene 3 (PS3); FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 26325 Blast hits to 26083 proteins in 2250 species: Archae - 498; Bacteria - 20836; Metazoa - 940; Fungi - 2597; Plants - 303; Viruses - 0; Other Eukaryotes - 1151 (source: NCBI BLink). & (reliability: 1254.0) & (original description: no original description)","protein_coding" "MA_73834g0010","No alias","Picea abies","(at4g32190 : 348.0) Myosin heavy chain-related protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description)","protein_coding" "MA_769805g0010","No alias","Picea abies","(q9fvl0|hbl1_medsa : 199.0) Non-symbiotic hemoglobin 1 (MEDsa GLB1) - Medicago sativa (Alfalfa) & (at2g16060 : 194.0) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.; hemoglobin 1 (HB1); FUNCTIONS IN: oxygen binding; INVOLVED IN: response to hypoxia; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: haemoglobin 2 (TAIR:AT3G10520.1); Has 783 Blast hits to 745 proteins in 194 species: Archae - 0; Bacteria - 173; Metazoa - 274; Fungi - 3; Plants - 318; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "MA_7948721g0010","No alias","Picea abies","(at5g24080 : 130.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description)","protein_coding" "MA_80387g0010","No alias","Picea abies","(at5g60770 : 601.0) member of High affinity nitrate transporter family; nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1202.0) & (original description: no original description)","protein_coding" "MA_844497g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_8524117g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_8779645g0010","No alias","Picea abies","(at2g36780 : 233.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (p56725|zox_phavu : 167.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 466.0) & (original description: no original description)","protein_coding" "MA_89549g0010","No alias","Picea abies","(at3g14090 : 440.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein D3 (EXO70D3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D2 (TAIR:AT1G54090.1); Has 911 Blast hits to 902 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 98; Plants - 650; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 880.0) & (original description: no original description)","protein_coding" "MA_90790g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_924620g0010","No alias","Picea abies","(q2hu68|h2a1_medtr : 180.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 172.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 344.0) & (original description: no original description)","protein_coding" "MA_962403g0010","No alias","Picea abies","(at4g00220 : 164.0) Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.; JAGGED LATERAL ORGANS (JLO); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 18 (TAIR:AT2G45420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "MA_981701g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "Potri.001G330900","No alias","Populus trichocarpa","sulfite oxidase","protein_coding" "Potri.002G088600","No alias","Populus trichocarpa","nitrate reductase 1","protein_coding" "Potri.005G172400","No alias","Populus trichocarpa","nitrate reductase 2","protein_coding" "Pp1s101_77V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s104_147V6","No alias","Physcomitrella patens","soluble starch synthase iv-2","protein_coding" "Pp1s104_180V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s104_95V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s107_109V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s107_134V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s107_6V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s10_167V6","No alias","Physcomitrella patens","T19C21.21; myb family transcription factor [Arabidopsis thaliana]","protein_coding" "Pp1s110_3V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s111_40V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s112_219V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s115_19V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s124_41V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s126_111V6","No alias","Physcomitrella patens","carboxylic ester","protein_coding" "Pp1s126_33V6","No alias","Physcomitrella patens","LOC397994; middle molecular weight neurofilament protein NF-M(1) [Xenopus laevis]","protein_coding" "Pp1s12_210V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s130_156V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s131_106V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s135_14V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s139_35V6","No alias","Physcomitrella patens","sulfite oxidase","protein_coding" "Pp1s13_322V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s13_348V6","No alias","Physcomitrella patens","nucleic acid binding","protein_coding" "Pp1s144_115V6","No alias","Physcomitrella patens","-gpd base excision dna repair family protein","protein_coding" "Pp1s145_80V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding" "Pp1s147_58V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s147_77V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s149_125V6","No alias","Physcomitrella patens","gamma-glutamyl hydrolase","protein_coding" "Pp1s149_38V6","No alias","Physcomitrella patens","f-box family protein","protein_coding" "Pp1s14_464V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s152_58V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s155_5V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s15_330V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s162_166V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s164_7V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s171_39V6","No alias","Physcomitrella patens","atp binding","protein_coding" "Pp1s174_121V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s175_6V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s176_43V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s182_53V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s18_103V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s190_72V6","No alias","Physcomitrella patens","sulfite oxidase","protein_coding" "Pp1s194_15V6","No alias","Physcomitrella patens","18.2 kDa class I heat shock protein (HSP 18.2) [Arabidopsis thaliana]","protein_coding" "Pp1s198_22V6","No alias","Physcomitrella patens","aldo keto reductase","protein_coding" "Pp1s207_93V6","No alias","Physcomitrella patens","F7G19.11; protein kinase, putative [Arabidopsis thaliana]","protein_coding" "Pp1s208_86V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s209_124V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s20_17V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s211_64V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s213_19V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s217_43V6","No alias","Physcomitrella patens","Galactose oxidase precursor (GAO) [Hypomyces rosellus]","protein_coding" "Pp1s218_9V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s21_386V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s222_120V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s223_131V6","No alias","Physcomitrella patens","brassinosteroid insensitive 1-associated receptor kinase 1","protein_coding" "Pp1s223_71V6","No alias","Physcomitrella patens","chitinase","protein_coding" "Pp1s22_194V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s22_206V6","No alias","Physcomitrella patens","K1F13.19; aldose 1-epimerase family [Arabidopsis thaliana]","protein_coding" "Pp1s22_68V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s235_22V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s236_89V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s23_145V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s240_91V6","No alias","Physcomitrella patens","serine threonine-protein kinase","protein_coding" "Pp1s245_81V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s248_26V6","No alias","Physcomitrella patens","sulfite oxidase","protein_coding" "Pp1s24_170V6","No alias","Physcomitrella patens","asc1-like protein 1","protein_coding" "Pp1s24_239V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s251_72V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s257_16V6","No alias","Physcomitrella patens","F6E13.26; kelch repeat-containing F-box family protein [Arabidopsis thaliana]","protein_coding" "Pp1s25_316V6","No alias","Physcomitrella patens","saur family protein","protein_coding" "Pp1s262_89V6","No alias","Physcomitrella patens","T5M7.5; chloroplast nucleoid DNA-binding protein-related [Arabidopsis thaliana]","protein_coding" "Pp1s263_50V6","No alias","Physcomitrella patens","polcalcin","protein_coding" "Pp1s263_68V6","No alias","Physcomitrella patens","T15F16.15; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s265_48V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s267_15V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s267_41V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s275_90V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s27_331V6","No alias","Physcomitrella patens","small heat-shock protein","protein_coding" "Pp1s280_10V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s281_52V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s284_23V6","No alias","Physcomitrella patens","contains EST(s): C28110(C60065) [Oryza sativa (japonica cultivar-group)]","protein_coding" "Pp1s28_189V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s295_37V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s29_155V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s2_231V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s2_467V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s300_29V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s301_36V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s306_51V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s307_50V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s309_33V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s30_161V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s310_5V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s313_24V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s316_31V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s319_40V6","No alias","Physcomitrella patens","hypothetical protein similar to Arabidopsis thaliana chromosome 2, At2g19390 [Oryza sativa (japonica cultivar-group)]","protein_coding" "Pp1s31_239V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s325_42V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s32_65V6","No alias","Physcomitrella patens","ap2 domain-containing transcription factor","protein_coding" "Pp1s339_38V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s33_195V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s341_65V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s345_24V6","No alias","Physcomitrella patens","glutamine synthetase","protein_coding" "Pp1s34_27V6","No alias","Physcomitrella patens","nucleosome binding protein","protein_coding" "Pp1s34_78V6","No alias","Physcomitrella patens","MGH6.15; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s358_39V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s36_303V6","No alias","Physcomitrella patens","F17M5.60; disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana]","protein_coding" "Pp1s37_250V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s384_31V6","No alias","Physcomitrella patens","proteophosphoglycan ppg1 [Leishmania major]","protein_coding" "Pp1s385_40V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s39_177V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s39_241V6","No alias","Physcomitrella patens","mrna (guanine-7-)","protein_coding" "Pp1s414_21V6","No alias","Physcomitrella patens","T5P19.150; serine-rich protein-related [Arabidopsis thaliana]","protein_coding" "Pp1s41_147V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s41_66V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s42_146V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s43_31V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s46_27V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s47_238V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s49_127V6","No alias","Physcomitrella patens","K21H1.28; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s53_218V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s53_87V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s56_105V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s58_126V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s58_249V6","No alias","Physcomitrella patens","nitrate reductase","protein_coding" "Pp1s58_252V6","No alias","Physcomitrella patens","nitrate reductase","protein_coding" "Pp1s59_12V6","No alias","Physcomitrella patens","cyclin dependent kinase a","protein_coding" "Pp1s60_265V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s61_11V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s61_190V6","No alias","Physcomitrella patens","cog3536: uncharacterized protein conserved in bacteria","protein_coding" "Pp1s65_66V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s66_39V6","No alias","Physcomitrella patens","GPI8; essential for GPI anchor attachment [EC:3.4.22.34] [Candida albicans SC5314]","protein_coding" "Pp1s66_89V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s68_141V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s69_66V6","No alias","Physcomitrella patens","cytochrome p450","protein_coding" "Pp1s71_218V6","No alias","Physcomitrella patens","elongation factor 1-gamma 3","protein_coding" "Pp1s72_212V6","No alias","Physcomitrella patens","zinc c3hc4 type family protein","protein_coding" "Pp1s74_86V6","No alias","Physcomitrella patens","ap2 erf domain-containing transcription factor","protein_coding" "Pp1s75_158V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s77_110V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s78_68V6","No alias","Physcomitrella patens","glucose-methanol-choline","protein_coding" "Pp1s79_115V6","No alias","Physcomitrella patens","novel protein vertebrate solute carrier family sodium bicarbonate member 5","protein_coding" "Pp1s79_76V6","No alias","Physcomitrella patens","nitrate reductase","protein_coding" "Pp1s80_169V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s81_235V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s84_166V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s852_4V6","No alias","Physcomitrella patens","chitinase","protein_coding" "Pp1s85_79V6","No alias","Physcomitrella patens","nbs-coding resistance gene protein","protein_coding" "Pp1s86_42V6","No alias","Physcomitrella patens","ribonuclease h","protein_coding" "Pp1s87_137V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s87_190V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s87_37V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s90_247V6","No alias","Physcomitrella patens","Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic nucleotide-and calmodulin-regulated ion channel 2) (DEFENSE NO DEATH 1) [Arabidopsis thaliana]","protein_coding" "Pp1s97_140V6","No alias","Physcomitrella patens","beta-expansin 4 precursor","protein_coding" "Pp1s97_257V6","No alias","Physcomitrella patens","hydrogen voltage-gated channel 1","protein_coding" "Pp1s97_282V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s9_201V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s9_315V6","No alias","Physcomitrella patens","No description available","protein_coding" "PSME_00000426-RA","No alias","Pseudotsuga menziesii","(at1g29320 : 197.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 10050 Blast hits to 5411 proteins in 439 species: Archae - 25; Bacteria - 1235; Metazoa - 2837; Fungi - 1519; Plants - 647; Viruses - 46; Other Eukaryotes - 3741 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)","protein_coding" "PSME_00000640-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 142.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "PSME_00000781-RA","No alias","Pseudotsuga menziesii","(at3g10690 : 369.0) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (q7xzf7|gyra_orysa : 368.0) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (reliability: 738.0) & (original description: no original description)","protein_coding" "PSME_00001416-RA","No alias","Pseudotsuga menziesii","(at3g01910 : 318.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p39869|nia_lotja : 123.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Lotus japonicus & (reliability: 636.0) & (original description: no original description)","protein_coding" "PSME_00001425-RA","No alias","Pseudotsuga menziesii","(q08632|sdr1_picab : 358.0) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (at3g03980 : 265.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G04000.1); Has 125329 Blast hits to 125098 proteins in 3700 species: Archae - 987; Bacteria - 82672; Metazoa - 6160; Fungi - 6506; Plants - 2912; Viruses - 12; Other Eukaryotes - 26080 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "PSME_00001955-RA","No alias","Pseudotsuga menziesii","(at1g18900 : 775.0) Pentatricopeptide repeat (PPR) superfamily protein; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74750.1). & (q76c99|rf1_orysa : 140.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1550.0) & (original description: no original description)","protein_coding" "PSME_00002559-RA","No alias","Pseudotsuga menziesii","(at2g04030 : 1108.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (p51819|hsp83_iponi : 598.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2216.0) & (original description: no original description)","protein_coding" "PSME_00002825-RA","No alias","Pseudotsuga menziesii","(at1g27700 : 95.1) Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description)","protein_coding" "PSME_00003968-RA","No alias","Pseudotsuga menziesii","(q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (at4g28250 : 254.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description)","protein_coding" "PSME_00004668-RA","No alias","Pseudotsuga menziesii","(at5g01340 : 405.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 810.0) & (original description: no original description)","protein_coding" "PSME_00004766-RA","No alias","Pseudotsuga menziesii","(at4g36470 : 263.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9fyz9|bamt_antma : 237.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 484.0) & (original description: no original description)","protein_coding" "PSME_00005351-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding" "PSME_00005491-RA","No alias","Pseudotsuga menziesii","(at1g51710 : 557.0) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.; ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 849; Plants - 654; Viruses - 2; Other Eukaryotes - 764 (source: NCBI BLink). & (reliability: 1114.0) & (original description: no original description)","protein_coding" "PSME_00009135-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 87.8) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "PSME_00009381-RA","No alias","Pseudotsuga menziesii","(at1g10510 : 315.0) embryo defective 2004 (emb2004); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 21704 Blast hits to 6781 proteins in 315 species: Archae - 0; Bacteria - 982; Metazoa - 9646; Fungi - 490; Plants - 1111; Viruses - 0; Other Eukaryotes - 9475 (source: NCBI BLink). & (reliability: 630.0) & (original description: no original description)","protein_coding" "PSME_00010577-RA","No alias","Pseudotsuga menziesii","(at2g22750 : 153.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G37850.1); Has 2965 Blast hits to 2952 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 48; Plants - 2862; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "PSME_00010642-RA","No alias","Pseudotsuga menziesii","(at1g26780 : 220.0) Encodes LOF1 (LATERAL ORGAN FUSION1), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF2 (At1g69560).; myb domain protein 117 (MYB117); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 105 (TAIR:AT1G69560.1); Has 8894 Blast hits to 7964 proteins in 558 species: Archae - 0; Bacteria - 0; Metazoa - 920; Fungi - 607; Plants - 5396; Viruses - 5; Other Eukaryotes - 1966 (source: NCBI BLink). & (p20024|myb1_maize : 98.6) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 440.0) & (original description: no original description)","protein_coding" "PSME_00011436-RA","No alias","Pseudotsuga menziesii","(at3g27740 : 471.0) carbamoyl phosphate synthetase small subunit mRNA (carA),; carbamoyl phosphate synthetase A (CARA); FUNCTIONS IN: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, catalytic activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Carbamoyl phosphate synthase, small subunit, N-terminal (InterPro:IPR002474), Glutamine amidotransferase type 1 (InterPro:IPR017926), Carbamoyl phosphate synthase, small subunit (InterPro:IPR006274), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 28262 Blast hits to 23423 proteins in 4115 species: Archae - 591; Bacteria - 17320; Metazoa - 1741; Fungi - 716; Plants - 245; Viruses - 0; Other Eukaryotes - 7649 (source: NCBI BLink). & (reliability: 942.0) & (original description: no original description)","protein_coding" "PSME_00011572-RA","No alias","Pseudotsuga menziesii","(at3g03530 : 224.0) PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.; non-specific phospholipase C4 (NPC4); FUNCTIONS IN: hydrolase activity, acting on ester bonds, phospholipase C activity; INVOLVED IN: phospholipid catabolic process; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C5 (TAIR:AT3G03540.1); Has 2107 Blast hits to 2050 proteins in 380 species: Archae - 32; Bacteria - 1750; Metazoa - 0; Fungi - 127; Plants - 153; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description)","protein_coding" "PSME_00012088-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00012090-RA","No alias","Pseudotsuga menziesii","(p93400|plda1_tobac : 415.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at3g15730 : 405.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 810.0) & (original description: no original description)","protein_coding" "PSME_00012169-RA","No alias","Pseudotsuga menziesii","(at3g14120 : 80.5) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252). & (reliability: 161.0) & (original description: no original description)","protein_coding" "PSME_00013238-RA","No alias","Pseudotsuga menziesii","(p93804|pgmc1_maize : 969.0) Phosphoglucomutase, cytoplasmic 1 (EC 5.4.2.2) (Glucose phosphomutase 1) (PGM 1) - Zea mays (Maize) & (at1g70730 : 954.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (reliability: 1908.0) & (original description: no original description)","protein_coding" "PSME_00013561-RA","No alias","Pseudotsuga menziesii","(q6h676|exb11_orysa : 166.0) Expansin-B11 precursor (OsEXPB11) (Beta-expansin-11) (OsaEXPb1.20) - Oryza sativa (Rice) & (at2g20750 : 163.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)","protein_coding" "PSME_00013867-RA","No alias","Pseudotsuga menziesii","(at1g18800 : 182.0) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.; NAP1-related protein 2 (NRP2); FUNCTIONS IN: chromatin binding, histone binding, DNA binding; INVOLVED IN: cell proliferation, cell differentiation, nucleosome assembly, lateral root formation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: NAP1-related protein 1 (TAIR:AT1G74560.2); Has 4380 Blast hits to 3595 proteins in 373 species: Archae - 7; Bacteria - 141; Metazoa - 1827; Fungi - 714; Plants - 336; Viruses - 93; Other Eukaryotes - 1262 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "PSME_00014572-RA","No alias","Pseudotsuga menziesii","(p17569|nia_cucma : 1080.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Cucurbita maxima (Pumpkin) (Winter squash) & (at1g77760 : 1037.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 2074.0) & (original description: no original description)","protein_coding" "PSME_00016275-RA","No alias","Pseudotsuga menziesii","(at3g16170 : 152.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "PSME_00016579-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00017501-RA","No alias","Pseudotsuga menziesii","(at1g30220 : 637.0) Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.; inositol transporter 2 (INT2); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 52249 Blast hits to 41863 proteins in 2438 species: Archae - 698; Bacteria - 26108; Metazoa - 7164; Fungi - 11733; Plants - 4458; Viruses - 2; Other Eukaryotes - 2086 (source: NCBI BLink). & (q41144|stc_ricco : 113.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1274.0) & (original description: no original description)","protein_coding" "PSME_00018394-RA","No alias","Pseudotsuga menziesii","(at1g66920 : 293.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 194.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 564.0) & (original description: no original description)","protein_coding" "PSME_00022089-RA","No alias","Pseudotsuga menziesii","(p39866|nia2_phavu : 1201.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g77760 : 1167.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 2334.0) & (original description: no original description)","protein_coding" "PSME_00022558-RA","No alias","Pseudotsuga menziesii","(at2g03500 : 225.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description)","protein_coding" "PSME_00023512-RA","No alias","Pseudotsuga menziesii","(at1g31500 : 201.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G31530.1); Has 1261 Blast hits to 1240 proteins in 208 species: Archae - 0; Bacteria - 12; Metazoa - 523; Fungi - 244; Plants - 247; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description)","protein_coding" "PSME_00023538-RA","No alias","Pseudotsuga menziesii","(at4g08550 : 466.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (reliability: 932.0) & (original description: no original description)","protein_coding" "PSME_00024098-RA","No alias","Pseudotsuga menziesii","(at2g12550 : 438.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 876.0) & (original description: no original description)","protein_coding" "PSME_00024367-RA","No alias","Pseudotsuga menziesii","(at5g21950 : 246.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G33180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 492.0) & (original description: no original description)","protein_coding" "PSME_00024924-RA","No alias","Pseudotsuga menziesii","(at4g02290 : 664.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 642.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (reliability: 1328.0) & (original description: no original description)","protein_coding" "PSME_00025604-RA","No alias","Pseudotsuga menziesii","(at4g20130 : 309.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description)","protein_coding" "PSME_00026135-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 790.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1580.0) & (original description: no original description)","protein_coding" "PSME_00026578-RA","No alias","Pseudotsuga menziesii","(p93438|metl_orysa : 707.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Oryza sativa (Rice) & (at4g01850 : 704.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (reliability: 1394.0) & (original description: no original description)","protein_coding" "PSME_00026677-RA","No alias","Pseudotsuga menziesii","(at1g67100 : 203.0) LOB domain-containing protein 40 (LBD40); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 41 (TAIR:AT3G02550.1); Has 635 Blast hits to 634 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)","protein_coding" "PSME_00026861-RA","No alias","Pseudotsuga menziesii","(at1g53830 : 537.0) encodes a pectin methylesterase; pectin methylesterase 2 (PME2); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plant-type cell wall; EXPRESSED IN: sepal, flower, root, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 3 (TAIR:AT3G14310.1); Has 3028 Blast hits to 2957 proteins in 336 species: Archae - 6; Bacteria - 620; Metazoa - 1; Fungi - 201; Plants - 2174; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (p83948|pme3_citsi : 520.0) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 1074.0) & (original description: no original description)","protein_coding" "PSME_00027114-RA","No alias","Pseudotsuga menziesii","(at5g52450 : 515.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1030.0) & (original description: no original description)","protein_coding" "PSME_00027164-RA","No alias","Pseudotsuga menziesii","(at3g26744 : 85.1) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.; INDUCER OF CBF EXPRESSION 1 (ICE1); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1); Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 30; Plants - 2572; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)","protein_coding" "PSME_00027420-RA","No alias","Pseudotsuga menziesii","(at5g11540 : 238.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)","protein_coding" "PSME_00027846-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00027948-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 484.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 968.0) & (original description: no original description)","protein_coding" "PSME_00029399-RA","No alias","Pseudotsuga menziesii","(q52qh4|nac68_orysa : 261.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (at1g01720 : 246.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "PSME_00030310-RA","No alias","Pseudotsuga menziesii","(at3g03740 : 159.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)","protein_coding" "PSME_00030428-RA","No alias","Pseudotsuga menziesii","(at1g06900 : 194.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT2G41790.1); Has 36039 Blast hits to 19499 proteins in 2240 species: Archae - 83; Bacteria - 7236; Metazoa - 10750; Fungi - 4343; Plants - 1987; Viruses - 664; Other Eukaryotes - 10976 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "PSME_00032965-RA","No alias","Pseudotsuga menziesii","(at3g03380 : 602.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (reliability: 1204.0) & (original description: no original description)","protein_coding" "PSME_00034577-RA","No alias","Pseudotsuga menziesii","(at3g07270 : 372.0) GTP cyclohydrolase I; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase I/Nitrile oxidoreductase (InterPro:IPR020602); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description)","protein_coding" "PSME_00035788-RA","No alias","Pseudotsuga menziesii","(at2g41480 : 438.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (p22196|per2_arahy : 416.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 876.0) & (original description: no original description)","protein_coding" "PSME_00036063-RA","No alias","Pseudotsuga menziesii","(at3g28460 : 134.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4869 Blast hits to 4869 proteins in 1755 species: Archae - 2; Bacteria - 3296; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)","protein_coding" "PSME_00036478-RA","No alias","Pseudotsuga menziesii","(at5g06050 : 249.0) Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "PSME_00036919-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 182.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29736|myra_sinal : 119.0) Myrosinase MA1 (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 364.0) & (original description: no original description)","protein_coding" "PSME_00038226-RA","No alias","Pseudotsuga menziesii","(at3g17800 : 176.0) mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to UV-B; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT1G48450.1); Has 158 Blast hits to 158 proteins in 33 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)","protein_coding" "PSME_00038645-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00039151-RA","No alias","Pseudotsuga menziesii","(at5g35550 : 114.0) TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; TRANSPARENT TESTA 2 (TT2); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 5 (TAIR:AT3G13540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p20026|myb1_horvu : 107.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 214.0) & (original description: no original description)","protein_coding" "PSME_00039319-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 189.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)","protein_coding" "PSME_00040214-RA","No alias","Pseudotsuga menziesii","(at5g01720 : 553.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G27920.1); Has 15959 Blast hits to 6468 proteins in 357 species: Archae - 0; Bacteria - 920; Metazoa - 6194; Fungi - 1434; Plants - 4975; Viruses - 16; Other Eukaryotes - 2420 (source: NCBI BLink). & (reliability: 1106.0) & (original description: no original description)","protein_coding" "PSME_00040645-RA","No alias","Pseudotsuga menziesii","(at5g55250 : 163.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 145.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 326.0) & (original description: no original description)","protein_coding" "PSME_00041119-RA","No alias","Pseudotsuga menziesii","(at5g67420 : 212.0) LOB domain-containing protein 37 (LBD37); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 38 (TAIR:AT3G49940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)","protein_coding" "PSME_00041246-RA","No alias","Pseudotsuga menziesii","(at3g07080 : 295.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT4G32140.1); Has 3286 Blast hits to 3282 proteins in 690 species: Archae - 51; Bacteria - 1416; Metazoa - 341; Fungi - 278; Plants - 200; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)","protein_coding" "PSME_00042917-RA","No alias","Pseudotsuga menziesii","(at5g44560 : 133.0) VPS2.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 266.0) & (original description: no original description)","protein_coding" "PSME_00045625-RA","No alias","Pseudotsuga menziesii","(at3g51140 : 256.0) Protein of unknown function (DUF3353); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3353 (InterPro:IPR021788); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3353) (TAIR:AT5G23040.1); Has 193 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)","protein_coding" "PSME_00046498-RA","No alias","Pseudotsuga menziesii","(at3g21670 : 563.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink). & (reliability: 1126.0) & (original description: no original description)","protein_coding" "PSME_00049620-RA","No alias","Pseudotsuga menziesii","(at3g01910 : 304.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (p36859|nia_pethy : 118.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Petunia hybrida (Petunia) & (reliability: 608.0) & (original description: no original description)","protein_coding" "PSME_00051096-RA","No alias","Pseudotsuga menziesii","(at2g36780 : 244.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36770.1); Has 8038 Blast hits to 7938 proteins in 460 species: Archae - 0; Bacteria - 340; Metazoa - 2374; Fungi - 35; Plants - 5114; Viruses - 105; Other Eukaryotes - 70 (source: NCBI BLink). & (p56725|zox_phavu : 160.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 462.0) & (original description: no original description)","protein_coding" "PSME_00052323-RA","No alias","Pseudotsuga menziesii","(at5g21920 : 172.0) YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1). & (reliability: 344.0) & (original description: no original description)","protein_coding" "PSME_00052407-RA","No alias","Pseudotsuga menziesii","(at4g09460 : 211.0) Encodes myb6 DNA-binding protein.; myb domain protein 6 (MYB6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: high response to osmotic stress 10 (TAIR:AT1G35515.1); Has 9066 Blast hits to 8378 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 460; Plants - 6053; Viruses - 3; Other Eukaryotes - 1770 (source: NCBI BLink). & (p20026|myb1_horvu : 207.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 422.0) & (original description: no original description)","protein_coding" "PSME_00055475-RA","No alias","Pseudotsuga menziesii","(at1g73500 : 337.0) member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.; MAP kinase kinase 9 (MKK9); FUNCTIONS IN: protein kinase activator activity, MAP kinase kinase activity, kinase activity; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 7 (TAIR:AT1G18350.1); Has 126854 Blast hits to 125581 proteins in 4823 species: Archae - 172; Bacteria - 14892; Metazoa - 47012; Fungi - 12114; Plants - 31822; Viruses - 500; Other Eukaryotes - 20342 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 223.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 674.0) & (original description: no original description)","protein_coding" "PSME_00055705-RA","No alias","Pseudotsuga menziesii","(at5g52060 : 85.5) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.; BCL-2-associated athanogene 1 (BAG1); INVOLVED IN: regulation of apoptosis, apoptosis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis regulator, Bcl-2 protein, BAG (InterPro:IPR003103), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: BCL-2-associated athanogene 3 (TAIR:AT5G07220.1); Has 385 Blast hits to 385 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 126; Fungi - 8; Plants - 222; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)","protein_coding" "PSME_00056795-RA","No alias","Pseudotsuga menziesii","(at2g22500 : 375.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (reliability: 732.0) & (original description: no original description)","protein_coding" "Solyc01g005620","No alias","Solanum lycopersicum","oxoglutarate/malate translocator","protein_coding" "Solyc01g006720","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR)","protein_coding" "Solyc01g009080","No alias","Solanum lycopersicum","Zeaxanthin epoxidase, chloroplastic (AHRD V3.3 *** A0A0B0MK82_GOSAR)","protein_coding" "Solyc01g014320","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative (AHRD V3.3 *** A0A061E9R4_THECC)","protein_coding" "Solyc01g080460","No alias","Solanum lycopersicum","pyruvate orthophosphate dikinase (AHRD V3.3 *** AT4G15530.6)","protein_coding" "Solyc01g081480","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT5G17670.1)","protein_coding" "Solyc01g087260","No alias","Solanum lycopersicum","carotenoid cleavage dioxygenase 1B","protein_coding" "Solyc01g087270","No alias","Solanum lycopersicum","Carotenoid cleavage dioxygenase (AHRD V3.3 *-* A0A166HYX6_DAUCA)","protein_coding" "Solyc01g091950","No alias","Solanum lycopersicum","1-acylglycerophosphocholine O-acyltransferase 1 (AHRD V3.3 *** A0A0B0N8P7_GOSAR)","protein_coding" "Solyc01g096660","No alias","Solanum lycopersicum","PSII-associated proline-rich protein","protein_coding" "Solyc01g097770","No alias","Solanum lycopersicum","phototropin 2","protein_coding" "Solyc01g100370","No alias","Solanum lycopersicum","Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** AT3G62550.1)","protein_coding" "Solyc01g100910","No alias","Solanum lycopersicum","WAT1-related protein (AHRD V3.3 *** K4B1C2_SOLLC)","protein_coding" "Solyc01g103760","No alias","Solanum lycopersicum","magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8)","protein_coding" "Solyc01g104910","No alias","Solanum lycopersicum","Loricrin-like protein (AHRD V3.3 *** A0A072UZF2_MEDTR)","protein_coding" "Solyc01g106790","No alias","Solanum lycopersicum","Tubulin alpha-6 chain, putative (AHRD V3.3 *** A0A072VQC5_MEDTR)","protein_coding" "Solyc01g108630","No alias","Solanum lycopersicum","nii1 nitrite reductase","protein_coding" "Solyc01g110670","No alias","Solanum lycopersicum","SAUR-like auxin-responsive protein family (AHRD V3.3 *** AT2G21210.2)","protein_coding" "Solyc01g110770","No alias","Solanum lycopersicum","Small auxin up-regulated RNA11","protein_coding" "Solyc01g110940","No alias","Solanum lycopersicum","SAUR-like auxin-responsive protein family (AHRD V3.3 *** AT4G38840.1)","protein_coding" "Solyc02g005180","No alias","Solanum lycopersicum","Sugar facilitator protein 2","protein_coding" "Solyc02g062340","No alias","Solanum lycopersicum","Fructose-bisphosphate aldolase (AHRD V3.3 *** K4B6C3_SOLLC)","protein_coding" "Solyc02g063530","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc02g065110","No alias","Solanum lycopersicum","MAP kinase kinase kinase 15","protein_coding" "Solyc02g067180","No alias","Solanum lycopersicum","cystathionine gamma synthase","protein_coding" "Solyc02g069860","No alias","Solanum lycopersicum","Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR)","protein_coding" "Solyc02g070080","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G10500.1)","protein_coding" "Solyc02g070910","No alias","Solanum lycopersicum","Ontology_term=GO:0004675","protein_coding" "Solyc02g071380","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G17010.1)","protein_coding" "Solyc02g072160","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT4G18810.1)","protein_coding" "Solyc02g076870","No alias","Solanum lycopersicum","Alpha/beta-hydrolase superfamily protein (AHRD V3.3 *** G7LIR3_MEDTR)","protein_coding" "Solyc02g077950","No alias","Solanum lycopersicum","Dof zinc finger protein5","protein_coding" "Solyc02g080780","No alias","Solanum lycopersicum","Orotidine 5'-phosphate decarboxylase (AHRD V3.3 *** A0A0B0MNV8_GOSAR)","protein_coding" "Solyc02g083790","No alias","Solanum lycopersicum","Pathogenesis-related thaumatin family protein (AHRD V3.3 *** G7JW96_MEDTR)","protein_coding" "Solyc02g084440","No alias","Solanum lycopersicum","Fructose-bisphosphate aldolase","protein_coding" "Solyc02g084740","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** D7MBI4_ARALL)","protein_coding" "Solyc02g086830","No alias","Solanum lycopersicum","Protease Do-like 1 (AHRD V3.3 *** W9SPU6_9ROSA)","protein_coding" "Solyc02g090100","No alias","Solanum lycopersicum","LOW QUALITY:Synechocystis YCF37 (AHRD V3.3 *** A0A061DHK7_THECC)","protein_coding" "Solyc02g092700","No alias","Solanum lycopersicum","DUF1230 family protein (DUF1230) (AHRD V3.3 *** AT5G67370.1)","protein_coding" "Solyc02g094120","No alias","Solanum lycopersicum","sulfite oxidase","protein_coding" "Solyc03g005230","No alias","Solanum lycopersicum","Methyl-6-phytyl-1,4-benzoquinone methyltransferase 2 (AHRD V3.3 *** F1BPW0_SOLPN)","protein_coding" "Solyc03g006250","No alias","Solanum lycopersicum","GDSL esterase/lipase (AHRD V3.3 *** A0A0B2QGL7_GLYSO)","protein_coding" "Solyc03g034170","No alias","Solanum lycopersicum","acclimation of photosynthesis to environment (AHRD V3.3 *** AT5G38660.1)","protein_coding" "Solyc03g044220","No alias","Solanum lycopersicum","F-box protein (AHRD V3.3 *** W9R4Y4_9ROSA)","protein_coding" "Solyc03g044330","No alias","Solanum lycopersicum","Acetolactate synthase (AHRD V3.3 *** A0A0V0IYE7_SOLCH)","protein_coding" "Solyc03g059260","No alias","Solanum lycopersicum","Carboxyl-terminal-processing protease (AHRD V3.3 *** A0A151QQ57_CAJCA)","protein_coding" "Solyc03g063030","No alias","Solanum lycopersicum","Transmembrane amino acid transporter family protein (AHRD V3.3 *** AT2G39130.2)","protein_coding" "Solyc03g063040","No alias","Solanum lycopersicum","Amino acid transporter family protein (AHRD V3.3 *-* B9HLH9_POPTR)","protein_coding" "Solyc03g080060","No alias","Solanum lycopersicum","LOW QUALITY:Clade XV lectin receptor kinase (AHRD V3.3 *** A0A0K1U1X9_SOLLC)","protein_coding" "Solyc03g083960","No alias","Solanum lycopersicum","Trehalose 6-phosphate phosphatase (AHRD V3.3 *** K4BIH1_SOLLC)","protein_coding" "Solyc03g093830","No alias","Solanum lycopersicum","ORANGE protein-like","protein_coding" "Solyc03g096900","No alias","Solanum lycopersicum","Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase isoform 3 (AHRD V3.3 *** A0A061F675_THECC)","protein_coding" "Solyc03g111690","No alias","Solanum lycopersicum","Pectate lyase family protein (AHRD V3.3 *** AT1G67750.1)","protein_coding" "Solyc03g111700","No alias","Solanum lycopersicum","Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** AT1G29700.2),Pfam:PF13483","protein_coding" "Solyc03g114340","No alias","Solanum lycopersicum","1-deoxy-D-xylulose-5-phosphate reductoisomerase","protein_coding" "Solyc03g115540","No alias","Solanum lycopersicum","bHLH transcription factor 024","protein_coding" "Solyc03g116570","No alias","Solanum lycopersicum","Thiol-disulfide oxidoreductase DCC (AHRD V3.3 *** A0A0K9PRB5_ZOSMR)","protein_coding" "Solyc03g118430","No alias","Solanum lycopersicum","Insulinase (Peptidase family M16) family protein (AHRD V3.3 *** AT5G42390.1)","protein_coding" "Solyc03g119540","No alias","Solanum lycopersicum","CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)","protein_coding" "Solyc03g121910","No alias","Solanum lycopersicum","Threonine synthase, putative (AHRD V3.3 *** B9RK44_RICCO)","protein_coding" "Solyc04g005090","No alias","Solanum lycopersicum","cofactor assembly of complex C (AHRD V3.3 *** AT1G59840.2)","protein_coding" "Solyc04g007110","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** G7JZC5_MEDTR)","protein_coding" "Solyc04g008570","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061GUB4_THECC)","protein_coding" "Solyc04g009580","No alias","Solanum lycopersicum","CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V3.3 *** W9RFS6_9ROSA)","protein_coding" "Solyc04g010190","No alias","Solanum lycopersicum","Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 --* K7TWD9_MAIZE)","protein_coding" "Solyc04g015130","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** Q02494_MAIZE)","protein_coding" "Solyc04g040190","No alias","Solanum lycopersicum","lycopene beta-cyclase","protein_coding" "Solyc04g049380","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *** AT2G39190.2)","protein_coding" "Solyc04g049390","No alias","Solanum lycopersicum","Kinase superfamily protein isoform 1 (AHRD V3.3 *-* A0A061FUY1_THECC)","protein_coding" "Solyc04g051800","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** AT5G09930.1)","protein_coding" "Solyc04g063240","No alias","Solanum lycopersicum","STAY-GREEN-like protein (AHRD V3.3 *** AT1G44000.1)","protein_coding" "Solyc04g064670","No alias","Solanum lycopersicum","Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GXL4_9ROSI)","protein_coding" "Solyc04g072050","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** I3SNC1_MEDTR)","protein_coding" "Solyc04g074180","No alias","Solanum lycopersicum","cryptochrome 1","protein_coding" "Solyc04g081320","No alias","Solanum lycopersicum","Protein disulfide-isomerase LQY1, chloroplastic (AHRD V3.3 *-* LQY1_ARATH)","protein_coding" "Solyc04g082920","No alias","Solanum lycopersicum","Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *-* K4BW18_SOLLC)","protein_coding" "Solyc04g083010","No alias","Solanum lycopersicum","ABC1-like kinase 3","protein_coding" "Solyc05g006640","No alias","Solanum lycopersicum","Phospholipid-transporting ATPase (AHRD V3.3 *** A0A0V0IYV6_SOLCH)","protein_coding" "Solyc05g006740","No alias","Solanum lycopersicum","Sl Glutathione S-transferase","protein_coding" "Solyc05g008070","No alias","Solanum lycopersicum","Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS)","protein_coding" "Solyc05g008080","No alias","Solanum lycopersicum","NOD26-like intrinsic protein 4.2","protein_coding" "Solyc05g008920","No alias","Solanum lycopersicum","DUF789 family protein (AHRD V3.3 *** G7KMK8_MEDTR)","protein_coding" "Solyc05g008950","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7KAJ2_ARALL)","protein_coding" "Solyc05g012620","No alias","Solanum lycopersicum","uvrB/uvrC motif-containing protein (AHRD V3.3 *** AT2G03390.4)","protein_coding" "Solyc05g013570","No alias","Solanum lycopersicum","Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT1G67900.6)","protein_coding" "Solyc05g013680","No alias","Solanum lycopersicum","GDSL esterase/lipase (AHRD V3.3 *** W9RN10_9ROSA)","protein_coding" "Solyc05g014190","No alias","Solanum lycopersicum","CAAX amino terminal protease family protein (AHRD V3.3 *** AT3G26085.4)","protein_coding" "Solyc05g015470","No alias","Solanum lycopersicum","LOW QUALITY:chaperone protein dnaJ-like protein (AHRD V3.3 *** AT5G43260.1)","protein_coding" "Solyc05g024260","No alias","Solanum lycopersicum","Bidirectional sugar transporter SWEET (AHRD V3.3 *** K4BZR4_SOLLC)","protein_coding" "Solyc05g025890","No alias","Solanum lycopersicum","Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** AT2G06025.6)","protein_coding" "Solyc05g041200","No alias","Solanum lycopersicum","4-hydroxyphenylpyruvate dioxygenase (AHRD V3.3 *** K4C0A1_SOLLC)","protein_coding" "Solyc05g050230","No alias","Solanum lycopersicum","Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA)","protein_coding" "Solyc05g051710","No alias","Solanum lycopersicum","RPM1-interacting protein 4 (RIN4) family protein (AHRD V3.3 *** G7LBA7_MEDTR)","protein_coding" "Solyc05g055790","No alias","Solanum lycopersicum","Protein phosphatase-2c, putative (AHRD V3.3 *** B9RM68_RICCO)","protein_coding" "Solyc05g055940","No alias","Solanum lycopersicum","Myb-like transcription factor family protein (AHRD V3.3 *** G7KXD8_MEDTR)","protein_coding" "Solyc05g056000","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT5G19290.1)","protein_coding" "Solyc05g056300","No alias","Solanum lycopersicum","Thioredoxin (AHRD V3.3 *** A0A103YEZ4_CYNCS)","protein_coding" "Solyc05g056320","No alias","Solanum lycopersicum","smr (Small MutS Related) domain-containing protein (AHRD V3.3 *** AT5G23520.2)","protein_coding" "Solyc06g010030","No alias","Solanum lycopersicum","MLO-like protein (AHRD V3.3 *-* K4C430_SOLLC)","protein_coding" "Solyc06g036640","No alias","Solanum lycopersicum","alpha-(1,6)-fucosyltransferase (AHRD V3.3 *** AT5G28910.2)","protein_coding" "Solyc06g049050","No alias","Solanum lycopersicum","expansin 2","protein_coding" "Solyc06g053480","No alias","Solanum lycopersicum","Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** A0A0V0I9I2_SOLCH)","protein_coding" "Solyc06g053840","No alias","Solanum lycopersicum","auxin-regulated IAA4","protein_coding" "Solyc06g053910","No alias","Solanum lycopersicum","DUF506 family protein (AHRD V3.3 *** A0A072VMZ8_MEDTR)","protein_coding" "Solyc06g060060","No alias","Solanum lycopersicum","NAD kinase 2 (AHRD V3.3 *** AT1G21640.1)","protein_coding" "Solyc06g060310","No alias","Solanum lycopersicum","Chlorophyllide a oxygenase (AHRD V3.3 *** W9SD87_9ROSA)","protein_coding" "Solyc06g064550","No alias","Solanum lycopersicum","Aspartokinase-homoserine dehydrogenase (AHRD V3.3 *** O63067_SOYBN)","protein_coding" "Solyc06g065040","No alias","Solanum lycopersicum","bHLH transcription factor 086","protein_coding" "Solyc06g068230","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT1G15290.1)","protein_coding" "Solyc06g068760","No alias","Solanum lycopersicum","Chromophore lyase CpcT/CpeT 3 (AHRD V3.3 *** A0A0B0NHE8_GOSAR)","protein_coding" "Solyc06g072710","No alias","Solanum lycopersicum","Sigma factor (AHRD V3.3 *** Q9SLX3_TOBAC)","protein_coding" "Solyc06g073290","No alias","Solanum lycopersicum","Tetrapyrrole-binding family protein (AHRD V3.3 *** B9HH58_POPTR)","protein_coding" "Solyc07g005360","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4CB08_SOLLC)","protein_coding" "Solyc07g005370","No alias","Solanum lycopersicum","Pathogenesis-related (PR)-10-related norcoclaurine synthase-like protein (AHRD V3.3 *** C3SBS5_ESCCA)","protein_coding" "Solyc07g017800","No alias","Solanum lycopersicum","La-related protein 6 isoform 1 (AHRD V3.3 *** A0A061GR72_THECC)","protein_coding" "Solyc07g032380","No alias","Solanum lycopersicum","DNA LIGASE 6 (AHRD V3.3 --* AT1G66730.1)","protein_coding" "Solyc07g032490","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT2G26690.1)","protein_coding" "Solyc07g040950","No alias","Solanum lycopersicum","Lactoylglutathione lyase / glyoxalase I family protein (AHRD V3.3 *** AT5G57040.1)","protein_coding" "Solyc07g043130","No alias","Solanum lycopersicum","Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT2G30520.1)","protein_coding" "Solyc07g049440","No alias","Solanum lycopersicum","GDSL esterase/lipase (AHRD V3.3 *** W9S4N1_9ROSA)","protein_coding" "Solyc07g051820","No alias","Solanum lycopersicum","Cellulose synthase family protein (AHRD V3.3 *** B9GTW0_POPTR)","protein_coding" "Solyc07g054290","No alias","Solanum lycopersicum","photosystem II family protein (AHRD V3.3 *** AT1G03600.1)","protein_coding" "Solyc07g055260","No alias","Solanum lycopersicum","DnaJ (AHRD V3.3 *** A0A126DIH0_ARAHY)","protein_coding" "Solyc07g056020","No alias","Solanum lycopersicum","Translation initiation factor IF-2 (AHRD V3.3 *** W9QCR7_9ROSA)","protein_coding" "Solyc07g061940","No alias","Solanum lycopersicum","Acetolactate synthase (AHRD V3.3 *** A0A0V0IYE7_SOLCH)","protein_coding" "Solyc07g066310","No alias","Solanum lycopersicum","Photosystem II 10 kDa polypeptide family protein (AHRD V3.3 *** A9PH94_POPTR)","protein_coding" "Solyc08g005010","No alias","Solanum lycopersicum","CAAX protease self-immunity protein (AHRD V3.3 *** AT4G17840.1)","protein_coding" "Solyc08g006590","No alias","Solanum lycopersicum","LOW QUALITY:enhanced disease resistance-like protein (DUF1336) (AHRD V3.3 *** AT5G10750.1)","protein_coding" "Solyc08g006990","No alias","Solanum lycopersicum","aluminum activated malate transporter family protein (AHRD V3.3 *** AT5G46610.1)","protein_coding" "Solyc08g007970","No alias","Solanum lycopersicum","Myosin heavy chain-related protein, putative (AHRD V3.3 *** A0A061GCE0_THECC)","protein_coding" "Solyc08g008100","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc08g008630","No alias","Solanum lycopersicum","beta-carotene isomerase D27 (AHRD V3.3 *** AT1G64680.2)","protein_coding" "Solyc08g013670","No alias","Solanum lycopersicum","photosystem I reaction center subunit","protein_coding" "Solyc08g016080","No alias","Solanum lycopersicum","high chlorophyll fluorescence phenotype 173 (AHRD V3.3 *** AT1G16720.1)","protein_coding" "Solyc08g076150","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5GMW9_POPTR)","protein_coding" "Solyc08g076780","No alias","Solanum lycopersicum","Cinnamoyl-CoA reductase, putative (AHRD V3.3 *-* B9S247_RICCO)","protein_coding" "Solyc08g079770","No alias","Solanum lycopersicum","S-type anion channel (AHRD V3.3 *** A0A1C3RMF1_MEDTR)","protein_coding" "Solyc08g081030","No alias","Solanum lycopersicum","LOW QUALITY:Haloacid dehalogenase-like hydrolase superfamily protein (AHRD V3.3 *** A0A061EYI4_THECC)","protein_coding" "Solyc08g082010","No alias","Solanum lycopersicum","Myosin heavy chain-like protein (AHRD V3.3 *** Q9FJ35_ARATH)","protein_coding" "Solyc08g082280","No alias","Solanum lycopersicum","Long-Chain Acyl-CoA Synthetase (AHRD V3.3 *** A0A0G2SJB5_SALMI)","protein_coding" "Solyc09g007760","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 2.10","protein_coding" "Solyc09g007770","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 2.1","protein_coding" "Solyc09g009830","No alias","Solanum lycopersicum","Carbonic anhydrase family protein (AHRD V3.3 *** D7LUA2_ARALL)","protein_coding" "Solyc09g011010","No alias","Solanum lycopersicum","Photosystem II 22 kDa protein, chloroplastic (AHRD V3.3 --* PSBS_SPIOL)","protein_coding" "Solyc09g063010","No alias","Solanum lycopersicum","bHLH transcription factor 058","protein_coding" "Solyc09g065020","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** A0A061DRU1_THECC)","protein_coding" "Solyc09g065900","No alias","Solanum lycopersicum","glutathione reductase, chloroplastic","protein_coding" "Solyc09g072990","No alias","Solanum lycopersicum","mRNA, clone: RTFL01-07-P23 (AHRD V3.3 *** E4MWC7_EUTHA)","protein_coding" "Solyc09g074610","No alias","Solanum lycopersicum","Chaperone DnaJ-domain superfamily protein (AHRD V3.3 *** A0A061EBG7_THECC)","protein_coding" "Solyc09g082580","No alias","Solanum lycopersicum","auxin canalization protein (DUF828) (AHRD V3.3 *** AT3G22810.1)","protein_coding" "Solyc09g082630","No alias","Solanum lycopersicum","1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (AHRD V3.3 *** A0A0H2UIA1_SOLLC)","protein_coding" "Solyc09g089730","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)","protein_coding" "Solyc09g090960","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G60000.1)","protein_coding" "Solyc09g097910","No alias","Solanum lycopersicum","30S ribosomal protein S1 (AHRD V3.3 *** W9RML0_9ROSA)","protein_coding" "Solyc10g006650","No alias","Solanum lycopersicum","Quinone reductase family protein (AHRD V3.3 *** AT4G27270.1)","protein_coding" "Solyc10g009230","No alias","Solanum lycopersicum","At2g46730/F19D11.1 (AHRD V3.3 --* Q8VYU9_ARATH)","protein_coding" "Solyc10g044520","No alias","Solanum lycopersicum","Ferredoxin (AHRD V3.3 *** A0A0K0PWX6_SOLLC)","protein_coding" "Solyc10g050920","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT3G22150.2)","protein_coding" "Solyc10g052530","No alias","Solanum lycopersicum","Small auxin up-regulated RNA72","protein_coding" "Solyc10g077040","No alias","Solanum lycopersicum","putative magnesium-protoporphyrin monomethyl ester cyclase","protein_coding" "Solyc10g077120","No alias","Solanum lycopersicum","Photosystem II core complex proteins psbY (AHRD V3.3 *** A0A061EES6_THECC)","protein_coding" "Solyc10g084440","No alias","Solanum lycopersicum","Dirigent protein (AHRD V3.3 *-* D7LW00_ARALL)","protein_coding" "Solyc10g085820","No alias","Solanum lycopersicum","DnaJ subfamily C member 28 (AHRD V3.3 *** A0A0B0MTA2_GOSAR)","protein_coding" "Solyc10g085830","No alias","Solanum lycopersicum","Caffeic acid O-methyltransferase (AHRD V3.3 *** A0A072VA70_MEDTR)","protein_coding" "Solyc10g086170","No alias","Solanum lycopersicum","amidase 1 (AHRD V3.3 *** AT1G08980.1)","protein_coding" "Solyc10g086580","No alias","Solanum lycopersicum","Ribulose bisphosphate carboxylase/oxygenase activase (AHRD V3.3 *** V9IMY5_NICAT)","protein_coding" "Solyc11g007270","No alias","Solanum lycopersicum","Alkaline/neutral invertase (AHRD V3.3 *** A0A0X8AZR5_CAMSI)","protein_coding" "Solyc11g007340","No alias","Solanum lycopersicum","Plant tudor-like RNA-binding protein (AHRD V3.3 *** A0A072UR05_MEDTR)","protein_coding" "Solyc11g007540","No alias","Solanum lycopersicum","cytochrome P450 77 A20","protein_coding" "Solyc11g008480","No alias","Solanum lycopersicum","Photosystem II reaction center PsbP family protein (AHRD V3.3 *** AT3G05410.2)","protein_coding" "Solyc11g009030","No alias","Solanum lycopersicum","LOW QUALITY:glycine-rich protein (AHRD V3.3 *** AT4G10330.1)","protein_coding" "Solyc11g011440","No alias","Solanum lycopersicum","LOW QUALITY:Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G66180.1)","protein_coding" "Solyc11g012850","No alias","Solanum lycopersicum","Chlorophyllide a oxygenase (AHRD V3.3 *** W9SD87_9ROSA)","protein_coding" "Solyc11g013810","No alias","Solanum lycopersicum","Nitrate reductase (AHRD V3.3 *** K4D6I5_SOLLC)","protein_coding" "Solyc11g042630","No alias","Solanum lycopersicum","DUF506 family protein (AHRD V3.3 *** G7K973_MEDTR)","protein_coding" "Solyc11g042640","No alias","Solanum lycopersicum","Rieske domain containing protein (AHRD V3.3 *** B6U301_MAIZE)","protein_coding" "Solyc11g066660","No alias","Solanum lycopersicum","Magnesium transporter MRS2-like protein (AHRD V3.3 *** A0A072VBF4_MEDTR)","protein_coding" "Solyc11g068530","No alias","Solanum lycopersicum","LOW QUALITY:FANTASTIC four-like protein (DUF3049) (AHRD V3.3 *-* AT5G22390.1)","protein_coding" "Solyc12g005660","No alias","Solanum lycopersicum","Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS)","protein_coding" "Solyc12g005980","No alias","Solanum lycopersicum","Ubiquitin and WLM domain-containing protein (AHRD V3.3 *** A0A0B0N1Y2_GOSAR)","protein_coding" "Solyc12g006420","No alias","Solanum lycopersicum","Topoisomerase II-associated protein PAT1 (AHRD V3.3 *** AT4G14990.1)","protein_coding" "Solyc12g006810","No alias","Solanum lycopersicum","SOUL heme-binding family protein (AHRD V3.3 *** AT5G20140.1)","protein_coding" "Solyc12g007010","No alias","Solanum lycopersicum","fe-S cluster assembly factor HCF101","protein_coding" "Solyc12g008380","No alias","Solanum lycopersicum","LOW QUALITY:Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 *** I3SWH2_MEDTR)","protein_coding" "Solyc12g009070","No alias","Solanum lycopersicum","Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 --* A0A151SSR0_CAJCA)","protein_coding" "Solyc12g009200","No alias","Solanum lycopersicum","Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** K4DC08_SOLLC)","protein_coding" "Solyc12g010870","No alias","Solanum lycopersicum","ATP synthase I-like protein","protein_coding" "Solyc12g010880","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc12g042920","No alias","Solanum lycopersicum","Cytochrome c1, heme protein (AHRD V3.3 *** G7KN99_MEDTR)","protein_coding" "Solyc12g056560","No alias","Solanum lycopersicum","Heat shock family protein (AHRD V3.3 *-* B9GTI4_POPTR)","protein_coding" "Solyc12g056850","No alias","Solanum lycopersicum","Chaperone protein DnaJ (AHRD V3.3 *** W9SH24_9ROSA)","protein_coding" "Solyc12g096500","No alias","Solanum lycopersicum","CONSTANS-like protein (AHRD V3.3 *** Q0MQL9_SOLTU)","protein_coding" "Solyc12g096550","No alias","Solanum lycopersicum","Pheophorbide a oxygenase (AHRD V3.3 *** A0A103XQM0_CYNCS)","protein_coding" "Solyc12g096580","No alias","Solanum lycopersicum","Potassium transporter (AHRD V3.3 *** M1BTK3_SOLTU)","protein_coding" "Solyc12g096870","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** Q0PI14_VITLA)","protein_coding" "Solyc12g098920","No alias","Solanum lycopersicum","RelA-SpoT like protein RSH4 (AHRD V3.3 *** Q84LE6_TOBAC)","protein_coding" "Sopen02g038740","No alias","Solanum pennellii","Oxidoreductase molybdopterin binding domain","protein_coding" "Sopen11g008740","No alias","Solanum pennellii","Mo-co oxidoreductase dimerisation domain","protein_coding"