"sequence_id","alias","species","description","type" "107634","No alias","Selaginella moellendorffii ","kinesin like protein for actin based chloroplast movement 2","protein_coding" "111647","No alias","Selaginella moellendorffii ","B-box type zinc finger family protein","protein_coding" "118803","No alias","Selaginella moellendorffii ","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding" "121598","No alias","Selaginella moellendorffii ","tonoplast dicarboxylate transporter","protein_coding" "134899","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A7","protein_coding" "137886","No alias","Selaginella moellendorffii ","maturase K","protein_coding" "142633","No alias","Selaginella moellendorffii ","phosphoenolpyruvate carboxykinase 1","protein_coding" "144086","No alias","Selaginella moellendorffii ","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding" "145611","No alias","Selaginella moellendorffii ","glutamate:glyoxylate aminotransferase","protein_coding" "149244","No alias","Selaginella moellendorffii ","K+ uptake permease 11","protein_coding" "149815","No alias","Selaginella moellendorffii ","proline-rich family protein","protein_coding" "149856","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding" "153433","No alias","Selaginella moellendorffii ","Transketolase family protein","protein_coding" "153563","No alias","Selaginella moellendorffii ","glycine decarboxylase P-protein 2","protein_coding" "154869","No alias","Selaginella moellendorffii ","cold shock domain protein 1","protein_coding" "155351","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "159420","No alias","Selaginella moellendorffii ","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding" "163526","No alias","Selaginella moellendorffii ","RNI-like superfamily protein","protein_coding" "165987","No alias","Selaginella moellendorffii ","UDP-GLUCOSE PYROPHOSPHORYLASE 1","protein_coding" "166088","No alias","Selaginella moellendorffii ","photosynthetic electron transfer C","protein_coding" "174630","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "177791","No alias","Selaginella moellendorffii ","solanesyl diphosphate synthase 1","protein_coding" "178158","No alias","Selaginella moellendorffii ","lipoxygenase 3","protein_coding" "179380","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A7","protein_coding" "184811","No alias","Selaginella moellendorffii ","trehalose-6-phosphate synthase","protein_coding" "18755","No alias","Selaginella moellendorffii ","RING/U-box superfamily protein","protein_coding" "231708","No alias","Selaginella moellendorffii ","magnesium (Mg) transporter 10","protein_coding" "231914","No alias","Selaginella moellendorffii ","photosystem II subunit R","protein_coding" "231921","No alias","Selaginella moellendorffii ","Calcium-dependent phosphotriesterase superfamily protein","protein_coding" "232963","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "233607","No alias","Selaginella moellendorffii ","Inositol monophosphatase family protein","protein_coding" "236581","No alias","Selaginella moellendorffii ","2Fe-2S ferredoxin-like superfamily protein","protein_coding" "267533","No alias","Selaginella moellendorffii ","Phosphoglycerate kinase family protein","protein_coding" "268623","No alias","Selaginella moellendorffii ","rubisco activase","protein_coding" "270375","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 11A3","protein_coding" "270698","No alias","Selaginella moellendorffii ","Aldolase superfamily protein","protein_coding" "270825","No alias","Selaginella moellendorffii ","glyceraldehyde 3-phosphate dehydrogenase A subunit 2","protein_coding" "271030","No alias","Selaginella moellendorffii ","Pyridine nucleotide-disulphide oxidoreductase family protein","protein_coding" "271394","No alias","Selaginella moellendorffii ","lipid-binding serum glycoprotein family protein","protein_coding" "271586","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "424281","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "437606","No alias","Selaginella moellendorffii ","AAA-type ATPase family protein / ankyrin repeat family protein","protein_coding" "440439","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "441093","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "441980","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "442777","No alias","Selaginella moellendorffii ","RNA-binding protein-defense related 1","protein_coding" "444108","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "445683","No alias","Selaginella moellendorffii ","ferric reduction oxidase 6","protein_coding" "448423","No alias","Selaginella moellendorffii ","protein containing PDZ domain, a K-box domain, and a TPR region","protein_coding" "448753","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "448933","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "56042","No alias","Selaginella moellendorffii ","nodulin MtN21 /EamA-like transporter family protein","protein_coding" "63565","No alias","Selaginella moellendorffii ","phosphoglycerate/bisphosphoglycerate mutase family protein","protein_coding" "76003","No alias","Selaginella moellendorffii ","Inositol monophosphatase family protein","protein_coding" "76749","No alias","Selaginella moellendorffii ","STT7 homolog STN7","protein_coding" "78366","No alias","Selaginella moellendorffii ","ABC2 homolog 13","protein_coding" "82367","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "83798","No alias","Selaginella moellendorffii ","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding" "88460","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1118)","protein_coding" "89397","No alias","Selaginella moellendorffii ","heavy metal atpase 2","protein_coding" "89924","No alias","Selaginella moellendorffii ","cycling DOF factor 1","protein_coding" "91594","No alias","Selaginella moellendorffii ","Uncharacterised protein family (UPF0114)","protein_coding" "94384","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "96134","No alias","Selaginella moellendorffii ","thioredoxin M-type 4","protein_coding" "96287","No alias","Selaginella moellendorffii ","Rubredoxin-like superfamily protein","protein_coding" "96997","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding" "97070","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding" "97883","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding" "A4A49_08119","No alias","Nicotiana attenuata","glycine dehydrogenase (decarboxylating), mitochondrial","protein_coding" "AC203093.3_FG001","No alias","Zea mays","Function unknown","protein_coding" "At1g03495","No alias","Arabidopsis thaliana","HXXXD-type acyl-transferase family protein [Source:TAIR;Acc:AT1G03495]","protein_coding" "At1g04350","No alias","Arabidopsis thaliana","1-aminocyclopropane-1-carboxylate oxidase homolog 6 [Source:UniProtKB/Swiss-Prot;Acc:P93824]","protein_coding" "At1g04550","No alias","Arabidopsis thaliana","Auxin-responsive protein IAA12 [Source:UniProtKB/Swiss-Prot;Acc:Q38830]","protein_coding" "At1g06550","No alias","Arabidopsis thaliana","3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]","protein_coding" "At1g07010","No alias","Arabidopsis thaliana","Calcineurin-like metallo-phosphoesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HNW0]","protein_coding" "At1g10960","No alias","Arabidopsis thaliana","Ferredoxin-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04090]","protein_coding" "At1g12820","No alias","Arabidopsis thaliana","Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]","protein_coding" "At1g25420","No alias","Arabidopsis thaliana","At1g25420/F2J7_16 [Source:UniProtKB/TrEMBL;Acc:Q9C6L2]","protein_coding" "At1g26220","No alias","Arabidopsis thaliana","Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C666]","protein_coding" "At1g29660","No alias","Arabidopsis thaliana","GDSL esterase/lipase At1g29660 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7N5]","protein_coding" "At1g29720","No alias","Arabidopsis thaliana","Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]","protein_coding" "At1g31300","No alias","Arabidopsis thaliana","At1g31300/T19E23_12 [Source:UniProtKB/TrEMBL;Acc:Q93Z82]","protein_coding" "At1g32520","No alias","Arabidopsis thaliana","TLDc domain protein [Source:UniProtKB/TrEMBL;Acc:Q682Q6]","protein_coding" "At1g33110","No alias","Arabidopsis thaliana","Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WPH4]","protein_coding" "At1g33811","No alias","Arabidopsis thaliana","GDSL esterase/lipase At1g33811 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Z1]","protein_coding" "At1g35510","No alias","Arabidopsis thaliana","O-fucosyltransferase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E6]","protein_coding" "At1g37130","No alias","Arabidopsis thaliana","Nitrate reductase [NADH] 2 [Source:UniProtKB/Swiss-Prot;Acc:P11035]","protein_coding" "At1g42550","No alias","Arabidopsis thaliana","Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]","protein_coding" "At1g48030","No alias","Arabidopsis thaliana","Dihydrolipoyl dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K3]","protein_coding" "At1g48480","No alias","Arabidopsis thaliana","Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]","protein_coding" "At1g50460","No alias","Arabidopsis thaliana","Hexokinase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPS1]","protein_coding" "At1g52870","No alias","Arabidopsis thaliana","At1g52870/F14G24_14 [Source:UniProtKB/TrEMBL;Acc:Q9C933]","protein_coding" "At1g60430","No alias","Arabidopsis thaliana","Actin-related protein 2/3 complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECJ7]","protein_coding" "At1g62960","No alias","Arabidopsis thaliana","Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]","protein_coding" "At1g63900","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase SP1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7N4]","protein_coding" "At1g64770","No alias","Arabidopsis thaliana","NDH-dependent cyclic electron flow 1 [Source:UniProtKB/TrEMBL;Acc:F4I890]","protein_coding" "At1g68010","No alias","Arabidopsis thaliana","hydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]","protein_coding" "At1g70250","No alias","Arabidopsis thaliana","Receptor serine/threonine kinase [Source:UniProtKB/TrEMBL;Acc:F4I5D4]","protein_coding" "At1g70730","No alias","Arabidopsis thaliana","Phosphoglucomutase/phosphomannomutase family protein [Source:UniProtKB/TrEMBL;Acc:F4I6W4]","protein_coding" "At1g72300","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGI8]","protein_coding" "At1g73650","No alias","Arabidopsis thaliana","Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]","protein_coding" "At1g75170","No alias","Arabidopsis thaliana","Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]","protein_coding" "At1g77760","No alias","Arabidopsis thaliana","Nitrate reductase [Source:UniProtKB/TrEMBL;Acc:A0A178WBR8]","protein_coding" "At1g78510","No alias","Arabidopsis thaliana","Solanesyl diphosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S948]","protein_coding" "At1g78570","No alias","Arabidopsis thaliana","Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]","protein_coding" "At2g01260","No alias","Arabidopsis thaliana","At2g01260 [Source:UniProtKB/TrEMBL;Acc:Q9ZU41]","protein_coding" "At2g04039","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 /.../hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). [Source:TAIR;Acc:AT2G04039]","protein_coding" "At2g21330","No alias","Arabidopsis thaliana","Fructose-bisphosphate aldolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU4]","protein_coding" "At2g26080","No alias","Arabidopsis thaliana","Glycine dehydrogenase (decarboxylating) 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80988]","protein_coding" "At2g27510","No alias","Arabidopsis thaliana","Ferredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178VWS0]","protein_coding" "At2g28350","No alias","Arabidopsis thaliana","Auxin response factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV66]","protein_coding" "At2g29340","No alias","Arabidopsis thaliana","Tropinone reductase homolog At2g29340 [Source:UniProtKB/Swiss-Prot;Acc:F4IKM1]","protein_coding" "At2g29720","No alias","Arabidopsis thaliana","FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:O82384]","protein_coding" "At2g30140","No alias","Arabidopsis thaliana","UDP-glycosyltransferase 87A2 [Source:UniProtKB/Swiss-Prot;Acc:O64733]","protein_coding" "At2g31750","No alias","Arabidopsis thaliana","UDP-glucosyl transferase 74D1 [Source:TAIR;Acc:AT2G31750]","protein_coding" "At2g32560","No alias","Arabidopsis thaliana","F-box protein At2g32560 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY82]","protein_coding" "At2g34150","No alias","Arabidopsis thaliana","Protein SCAR1 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX6]","protein_coding" "At2g34560","No alias","Arabidopsis thaliana","AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]","protein_coding" "At2g42690","No alias","Arabidopsis thaliana","Phospholipase A1-IIdelta [Source:UniProtKB/Swiss-Prot;Acc:Q9SJI7]","protein_coding" "At2g47440","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22266]","protein_coding" "At2g47860","No alias","Arabidopsis thaliana","Phototropic-responsive NPH3 family protein [Source:UniProtKB/TrEMBL;Acc:F4IM54]","protein_coding" "At3g02360","No alias","Arabidopsis thaliana","6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/TrEMBL;Acc:A0A178VK18]","protein_coding" "At3g04520","No alias","Arabidopsis thaliana","Probable low-specificity L-threonine aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPH3]","protein_coding" "At3g06350","No alias","Arabidopsis thaliana","Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQT8]","protein_coding" "At3g06750","No alias","Arabidopsis thaliana","F3E22.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9M7Y1]","protein_coding" "At3g06760","No alias","Arabidopsis thaliana","Drought-responsive family protein [Source:UniProtKB/TrEMBL;Acc:F4JC45]","protein_coding" "At3g10760","No alias","Arabidopsis thaliana","Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]","protein_coding" "At3g10840","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A4IJ41]","protein_coding" "At3g13040","No alias","Arabidopsis thaliana","Myb family transcription factor PHL6 [Source:UniProtKB/Swiss-Prot;Acc:Q949U2]","protein_coding" "At3g14205","No alias","Arabidopsis thaliana","Phosphoinositide phosphatase SAC2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A27]","protein_coding" "At3g14415","No alias","Arabidopsis thaliana","GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]","protein_coding" "At3g15650","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J010]","protein_coding" "At3g17390","No alias","Arabidopsis thaliana","S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VIP8]","protein_coding" "At3g19000","No alias","Arabidopsis thaliana","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]","protein_coding" "At3g19480","No alias","Arabidopsis thaliana","D-3-phosphoglycerate dehydrogenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LT69]","protein_coding" "At3g22110","No alias","Arabidopsis thaliana","Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]","protein_coding" "At3g26070","No alias","Arabidopsis thaliana","Probable plastid-lipid-associated protein 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU85]","protein_coding" "At3g28270","No alias","Arabidopsis thaliana","UPF0496 protein At3g28270 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD9]","protein_coding" "At3g49220","No alias","Arabidopsis thaliana","Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRM8]","protein_coding" "At3g49810","No alias","Arabidopsis thaliana","U-box domain-containing protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q058P4]","protein_coding" "At3g51240","No alias","Arabidopsis thaliana","Naringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]","protein_coding" "At3g52230","No alias","Arabidopsis thaliana","AT3g52230/F4F15_340 [Source:UniProtKB/TrEMBL;Acc:Q9SUY2]","protein_coding" "At3g52360","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9FT46]","protein_coding" "At3g55120","No alias","Arabidopsis thaliana","Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]","protein_coding" "At3g56200","No alias","Arabidopsis thaliana","Amino acid transporter AVT6C [Source:UniProtKB/Swiss-Prot;Acc:Q9LYM2]","protein_coding" "At4g00490","No alias","Arabidopsis thaliana","Beta-amylase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O65258]","protein_coding" "At4g04540","No alias","Arabidopsis thaliana","Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]","protein_coding" "At4g05090","No alias","Arabidopsis thaliana","3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]","protein_coding" "At4g05390","No alias","Arabidopsis thaliana","Ferredoxin--NADP reductase, root isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V6]","protein_coding" "At4g12390","No alias","Arabidopsis thaliana","Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]","protein_coding" "At4g12830","No alias","Arabidopsis thaliana","AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]","protein_coding" "At4g14090","No alias","Arabidopsis thaliana","UDP-glycosyltransferase 75C1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WW21]","protein_coding" "At4g22870","No alias","Arabidopsis thaliana","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMN7]","protein_coding" "At4g25700","No alias","Arabidopsis thaliana","Beta-carotene 3-hydroxylase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZZ8]","protein_coding" "At4g25830","No alias","Arabidopsis thaliana","CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTE2]","protein_coding" "At4g27030","No alias","Arabidopsis thaliana","FADA [Source:UniProtKB/TrEMBL;Acc:A0A178UUY9]","protein_coding" "At4g28740","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (Inter /.../R021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28740]","protein_coding" "At4g30210","No alias","Arabidopsis thaliana","P450 reductase 2 [Source:TAIR;Acc:AT4G30210]","protein_coding" "At4g30610","No alias","Arabidopsis thaliana","Serine carboxypeptidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9M099]","protein_coding" "At4g32260","No alias","Arabidopsis thaliana","PDE334 [Source:UniProtKB/TrEMBL;Acc:A0A178V017]","protein_coding" "At4g32880","No alias","Arabidopsis thaliana","Homeobox-leucine zipper protein ATHB-8 [Source:UniProtKB/Swiss-Prot;Acc:Q39123]","protein_coding" "At4g33010","No alias","Arabidopsis thaliana","Glycine cleavage system P protein [Source:UniProtKB/TrEMBL;Acc:A0A178UTF1]","protein_coding" "At4g33950","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]","protein_coding" "At4g37460","No alias","Arabidopsis thaliana","SRFR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V335]","protein_coding" "At4g37560","No alias","Arabidopsis thaliana","Acetamidase/Formamidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8H1G4]","protein_coding" "At4g38970","No alias","Arabidopsis thaliana","Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]","protein_coding" "At5g05790","No alias","Arabidopsis thaliana","At5g05790 [Source:UniProtKB/TrEMBL;Acc:Q9FFJ9]","protein_coding" "At5g09870","No alias","Arabidopsis thaliana","Cellulose synthase A catalytic subunit 5 [UDP-forming] [Source:UniProtKB/Swiss-Prot;Acc:Q8L778]","protein_coding" "At5g16540","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 57 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7N8]","protein_coding" "At5g17010","No alias","Arabidopsis thaliana","D-xylose-proton symporter-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6AWX0]","protein_coding" "At5g17230","No alias","Arabidopsis thaliana","PHYTOENE SYNTHASE [Source:UniProtKB/TrEMBL;Acc:F4KGX7]","protein_coding" "At5g17310","No alias","Arabidopsis thaliana","UTP--glucose-1-phosphate uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:P57751]","protein_coding" "At5g19760","No alias","Arabidopsis thaliana","Mitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]","protein_coding" "At5g24810","No alias","Arabidopsis thaliana","ABC1 family protein [Source:UniProtKB/TrEMBL;Acc:F4KIJ2]","protein_coding" "At5g42100","No alias","Arabidopsis thaliana","Glucan endo-1,3-beta-glucosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHX5]","protein_coding" "At5g46800","No alias","Arabidopsis thaliana","Mitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]","protein_coding" "At5g50915","No alias","Arabidopsis thaliana","Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]","protein_coding" "At5g51020","No alias","Arabidopsis thaliana","Chromophore lyase CRL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FI46]","protein_coding" "At5g51460","No alias","Arabidopsis thaliana","Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]","protein_coding" "At5g53370","No alias","Arabidopsis thaliana","pectin methylesterase PCR fragment F [Source:TAIR;Acc:AT5G53370]","protein_coding" "At5g56860","No alias","Arabidopsis thaliana","GATA transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ36]","protein_coding" "At5g57960","No alias","Arabidopsis thaliana","GTP binding protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FJM0]","protein_coding" "At5g58140","No alias","Arabidopsis thaliana","Phototropin-2 [Source:UniProtKB/Swiss-Prot;Acc:P93025]","protein_coding" "At5g58260","No alias","Arabidopsis thaliana","NdhN [Source:UniProtKB/TrEMBL;Acc:A0A178UG88]","protein_coding" "At5g59770","No alias","Arabidopsis thaliana","Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:Q8GW27]","protein_coding" "At5g61410","No alias","Arabidopsis thaliana","RPE [Source:UniProtKB/TrEMBL;Acc:A0A178UPG9]","protein_coding" "At5g62140","No alias","Arabidopsis thaliana","ATP-dependent Clp protease ATP-binding subunit [Source:UniProtKB/TrEMBL;Acc:Q9FIS4]","protein_coding" "At5g62210","No alias","Arabidopsis thaliana","Embryo-specific protein 3, (ATS3) [Source:UniProtKB/TrEMBL;Acc:Q9LVB5]","protein_coding" "At5g66730","No alias","Arabidopsis thaliana","IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]","protein_coding" "At5g67370","No alias","Arabidopsis thaliana","Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FN15]","protein_coding" "Bradi1g02680","No alias","Brachypodium distachyon","translocon at the outer envelope membrane of chloroplasts 159","protein_coding" "Bradi1g03940","No alias","Brachypodium distachyon","TRICHOME BIREFRINGENCE-LIKE 33","protein_coding" "Bradi1g06620","No alias","Brachypodium distachyon","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Bradi1g12880","No alias","Brachypodium distachyon","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein","protein_coding" "Bradi1g15120","No alias","Brachypodium distachyon","ACT domain repeat 4","protein_coding" "Bradi1g15450","No alias","Brachypodium distachyon","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding" "Bradi1g16075","No alias","Brachypodium distachyon","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Bradi1g19010","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Bradi1g20730","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding" "Bradi1g24590","No alias","Brachypodium distachyon","Protein of unknown function (DUF707)","protein_coding" "Bradi1g24747","No alias","Brachypodium distachyon","myosin 2","protein_coding" "Bradi1g27377","No alias","Brachypodium distachyon","MUTS-like protein 4","protein_coding" "Bradi1g29457","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi1g29680","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi1g31357","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g31670","No alias","Brachypodium distachyon","cryptochrome 3","protein_coding" "Bradi1g49960","No alias","Brachypodium distachyon","Cell cycle regulated microtubule associated protein","protein_coding" "Bradi1g52540","No alias","Brachypodium distachyon","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain","protein_coding" "Bradi1g60720","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi1g63100","No alias","Brachypodium distachyon","potassium transporter 2","protein_coding" "Bradi1g64110","No alias","Brachypodium distachyon","non-intrinsic ABC protein 9","protein_coding" "Bradi1g64381","No alias","Brachypodium distachyon","high chlorophyll fluorescent 107","protein_coding" "Bradi1g67270","No alias","Brachypodium distachyon","Calcium-binding tetratricopeptide family protein","protein_coding" "Bradi1g69170","No alias","Brachypodium distachyon","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Bradi1g71160","No alias","Brachypodium distachyon","Arabinanase/levansucrase/invertase","protein_coding" "Bradi1g74350","No alias","Brachypodium distachyon","heat shock transcription factor A6B","protein_coding" "Bradi2g03400","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi2g05620","No alias","Brachypodium distachyon","NADP-malic enzyme 4","protein_coding" "Bradi2g06260","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi2g09720","No alias","Brachypodium distachyon","cycling DOF factor 2","protein_coding" "Bradi2g11220","No alias","Brachypodium distachyon","CBL-interacting protein kinase 1","protein_coding" "Bradi2g15307","No alias","Brachypodium distachyon","solanesyl diphosphate synthase 2","protein_coding" "Bradi2g15317","No alias","Brachypodium distachyon","MAP kinase 20","protein_coding" "Bradi2g15630","No alias","Brachypodium distachyon","Hydroxyproline-rich glycoprotein family protein","protein_coding" "Bradi2g16887","No alias","Brachypodium distachyon","MATE efflux family protein","protein_coding" "Bradi2g25190","No alias","Brachypodium distachyon","Seven transmembrane MLO family protein","protein_coding" "Bradi2g25570","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi2g36890","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g43830","No alias","Brachypodium distachyon","Protein of unknown function (DUF3133)","protein_coding" "Bradi2g44170","No alias","Brachypodium distachyon","cytochrome P450, family 72, subfamily A, polypeptide 14","protein_coding" "Bradi2g44942","No alias","Brachypodium distachyon","prenylcysteine methylesterase","protein_coding" "Bradi2g48010","No alias","Brachypodium distachyon","glycine decarboxylase P-protein 2","protein_coding" "Bradi2g48130","No alias","Brachypodium distachyon","Integrase-type DNA-binding superfamily protein","protein_coding" "Bradi2g48657","No alias","Brachypodium distachyon","SPA1-related 4","protein_coding" "Bradi2g51300","No alias","Brachypodium distachyon","double-stranded-RNA-binding protein 4","protein_coding" "Bradi2g53620","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g59740","No alias","Brachypodium distachyon","thiamin pyrophosphokinase1","protein_coding" "Bradi2g59950","No alias","Brachypodium distachyon","Photosystem II reaction center PsbP family protein","protein_coding" "Bradi2g60630","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g62200","No alias","Brachypodium distachyon","Ankyrin repeat family protein","protein_coding" "Bradi3g06350","No alias","Brachypodium distachyon","Cyclase family protein","protein_coding" "Bradi3g07150","No alias","Brachypodium distachyon","Seven transmembrane MLO family protein","protein_coding" "Bradi3g08667","No alias","Brachypodium distachyon","indole-3-acetic acid inducible 18","protein_coding" "Bradi3g09350","No alias","Brachypodium distachyon","sodium/calcium exchanger family protein / calcium-binding EF hand family protein","protein_coding" "Bradi3g10150","No alias","Brachypodium distachyon","ENTH/VHS/GAT family protein","protein_coding" "Bradi3g10210","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding" "Bradi3g10770","No alias","Brachypodium distachyon","senescence-associated family protein","protein_coding" "Bradi3g14260","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi3g16515","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi3g18850","No alias","Brachypodium distachyon","P450 reductase 2","protein_coding" "Bradi3g22580","No alias","Brachypodium distachyon","photolyase 1","protein_coding" "Bradi3g23040","No alias","Brachypodium distachyon","Calcium-binding endonuclease/exonuclease/phosphatase family","protein_coding" "Bradi3g25658","No alias","Brachypodium distachyon","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding" "Bradi3g33930","No alias","Brachypodium distachyon","plastidic pyruvate kinase beta subunit 1","protein_coding" "Bradi3g34820","No alias","Brachypodium distachyon","manganese tracking factor for mitochondrial SOD2","protein_coding" "Bradi3g35000","No alias","Brachypodium distachyon","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding" "Bradi3g43790","No alias","Brachypodium distachyon","Protein of unknown function (DUF803)","protein_coding" "Bradi3g44140","No alias","Brachypodium distachyon","Heavy metal transport/detoxification superfamily protein","protein_coding" "Bradi3g44197","No alias","Brachypodium distachyon","DNA polymerase epsilon catalytic subunit","protein_coding" "Bradi3g45180","No alias","Brachypodium distachyon","UDP-Glycosyltransferase superfamily protein","protein_coding" "Bradi3g51757","No alias","Brachypodium distachyon","Homeodomain-like superfamily protein","protein_coding" "Bradi3g55317","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi4g00860","No alias","Brachypodium distachyon","lipases;hydrolases, acting on ester bonds","protein_coding" "Bradi4g01100","No alias","Brachypodium distachyon","PHYTOENE SYNTHASE","protein_coding" "Bradi4g11500","No alias","Brachypodium distachyon","sodium hydrogen exchanger 2","protein_coding" "Bradi4g15010","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g15130","No alias","Brachypodium distachyon","ETO1-like 1","protein_coding" "Bradi4g22700","No alias","Brachypodium distachyon","mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase","protein_coding" "Bradi4g25010","No alias","Brachypodium distachyon","UDP-Glycosyltransferase superfamily protein","protein_coding" "Bradi4g30480","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding" "Bradi4g33907","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi4g34000","No alias","Brachypodium distachyon","protein phosphatase 2A-4","protein_coding" "Bradi4g36517","No alias","Brachypodium distachyon","glycosyl hydrolase family 35 protein","protein_coding" "Bradi4g37608","No alias","Brachypodium distachyon","phosphate transporter 4;5","protein_coding" "Bradi4g37770","No alias","Brachypodium distachyon","P450 reductase 2","protein_coding" "Bradi4g38140","No alias","Brachypodium distachyon","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "Bradi4g41820","No alias","Brachypodium distachyon","tubby like protein 1","protein_coding" "Bradi4g41850","No alias","Brachypodium distachyon","actin 7","protein_coding" "Bradi5g00980","No alias","Brachypodium distachyon","cytochrome P450, family 79, subfamily B, polypeptide 2","protein_coding" "Bradi5g08800","No alias","Brachypodium distachyon","alpha-amylase-like 2","protein_coding" "Bradi5g08810","No alias","Brachypodium distachyon","forkhead-associated domain-containing protein / FHA domain-containing protein","protein_coding" "Bradi5g11141","No alias","Brachypodium distachyon","cysteine-rich RLK (RECEPTOR-like protein kinase) 10","protein_coding" "Bradi5g20177","No alias","Brachypodium distachyon","cation exchanger 1","protein_coding" "Bradi5g26725","No alias","Brachypodium distachyon","glutathione peroxidase 6","protein_coding" "Bradi5g27090","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding" "Brara.A00490.1","No alias","Brassica rapa","glycine dehydrogenase component *(P-protein) of glycine cleavage system & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "Brara.A00851.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A00911.1","No alias","Brassica rapa","receptor component *(PYL/RCAR) of cytoplasm-localized abscisic acid receptor complex","protein_coding" "Brara.A01390.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01446.1","No alias","Brassica rapa","SnRK3 SNF1-related protein kinase & protein kinase *(SOS2) & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.A03418.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03450.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00181.1","No alias","Brassica rapa","regulatory protein *(TMS) of vesicle trafficking","protein_coding" "Brara.B00877.1","No alias","Brassica rapa","sucrose-phosphate synthase & EC_2.4 glycosyltransferase","protein_coding" "Brara.B00917.1","No alias","Brassica rapa","assembly factor CRR42 involved in NDH complex assembly","protein_coding" "Brara.B01271.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B02162.1","No alias","Brassica rapa","beta-type-3 component *(PBC) of 26S proteasome","protein_coding" "Brara.B03041.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02168.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02211.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02308.1","No alias","Brassica rapa","URM ubiquitin-fold protein & CTU1-URM1 pathway sulfur carrier protein *(URM1)","protein_coding" "Brara.C02525.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02863.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C04580.1","No alias","Brassica rapa","methionine R-enantiomer sulfoxide reductase *(MsrB)","protein_coding" "Brara.D00157.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00710.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00750.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00816.1","No alias","Brassica rapa","protein kinase *(RIPK) targeted to RIN4 & RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.D01361.1","No alias","Brassica rapa","peroxisomal NAD-dependent malate dehydrogenase","protein_coding" "Brara.D02850.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.E00084.1","No alias","Brassica rapa","translation peptide chain release factor *(PrfA)","protein_coding" "Brara.E01517.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01803.1","No alias","Brassica rapa","organic cation transporter *(PUP)","protein_coding" "Brara.E02198.1","No alias","Brassica rapa","hexokinase","protein_coding" "Brara.E02944.1","No alias","Brassica rapa","nucleotide sugar transporter *(UUAT)","protein_coding" "Brara.F00255.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F00308.1","No alias","Brassica rapa","10-formyl-THF synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding" "Brara.F00941.1","No alias","Brassica rapa","1,2-alpha-fucosyltransferase *(FUT)","protein_coding" "Brara.F03631.1","No alias","Brassica rapa","voltage-gated potassium cation channel *(AKT/SKOR/GORK)","protein_coding" "Brara.G01746.1","No alias","Brassica rapa","adenylosuccinate synthetase *(PUR11) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding" "Brara.G01864.1","No alias","Brassica rapa","ethylene signal modulator *(ARGOS)","protein_coding" "Brara.G02073.1","No alias","Brassica rapa","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.H00292.1","No alias","Brassica rapa","U-Box-group-III E3 ubiquitin ligase","protein_coding" "Brara.H02478.1","No alias","Brassica rapa","pythosulfokine peptide receptor *(PSKR)","protein_coding" "Brara.H02896.1","No alias","Brassica rapa","EC_1.11 oxidoreductase acting on peroxide as acceptor & cytosolic ascorbate peroxidase *(APX)","protein_coding" "Brara.H02988.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I01723.1","No alias","Brassica rapa","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I02072.1","No alias","Brassica rapa","MADS/AGL-type transcription factor","protein_coding" "Brara.I02547.1","No alias","Brassica rapa","UDP-D-glucose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding" "Brara.I03481.1","No alias","Brassica rapa","EC_4.3 carbon-nitrogen lyase","protein_coding" "Brara.I04571.1","No alias","Brassica rapa","component *(BRK1) of SCAR/WAVE ARP2/3-activating complex","protein_coding" "Brara.I04707.1","No alias","Brassica rapa","Extensin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I05636.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00232.1","No alias","Brassica rapa","protease *(SBT1)","protein_coding" "Brara.J02374.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J02564.1","No alias","Brassica rapa","D-lactate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Brara.J02869.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J02911.1","No alias","Brassica rapa","RopGEF guanine nucleotide exchange factor *(PRONE)","protein_coding" "Brara.K00332.1","No alias","Brassica rapa","arginine decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding" "Brara.K00649.1","No alias","Brassica rapa","beta-type carbonic anhydrase","protein_coding" "Brara.K00671.1","No alias","Brassica rapa","Unknown function","protein_coding" "Cre01.g011660","No alias","Chlamydomonas reinhardtii","CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein","protein_coding" "Cre01.g019000","No alias","Chlamydomonas reinhardtii","AIG2-like (avirulence induced gene) family protein","protein_coding" "Cre01.g030000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g036950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g048550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g049350","No alias","Chlamydomonas reinhardtii","ethylene-dependent gravitropism-deficient and yellow-green-like 2","protein_coding" "Cre02.g081050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g108200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g146900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g143927","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g180750","No alias","Chlamydomonas reinhardtii","methionine synthase 3","protein_coding" "Cre03.g204601","No alias","Chlamydomonas reinhardtii","adenosine kinase 2","protein_coding" "Cre03.g206033","No alias","Chlamydomonas reinhardtii","Auxin-responsive family protein","protein_coding" "Cre06.g250200","No alias","Chlamydomonas reinhardtii","methionine adenosyltransferase 3","protein_coding" "Cre06.g250902","No alias","Chlamydomonas reinhardtii","Homocysteine S-methyltransferase family protein","protein_coding" "Cre06.g259150","No alias","Chlamydomonas reinhardtii","GTP binding Elongation factor Tu family protein","protein_coding" "Cre06.g278104","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g282251","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g291300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g295400","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding" "Cre06.g307100","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre07.g346050","No alias","Chlamydomonas reinhardtii","dicarboxylate diiron protein, putative (Crd1)","protein_coding" "Cre07.g347000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre08.g377100","No alias","Chlamydomonas reinhardtii","adenosine kinase","protein_coding" "Cre09.g388393","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding" "Cre09.g407373","No alias","Chlamydomonas reinhardtii","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "Cre10.g433600","No alias","Chlamydomonas reinhardtii","methylenetetrahydrofolate reductase 2","protein_coding" "Cre10.g433650","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Cre10.g446200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g493700","No alias","Chlamydomonas reinhardtii","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Cre12.g518900","No alias","Chlamydomonas reinhardtii","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "Cre12.g521650","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding" "Cre12.g534800","No alias","Chlamydomonas reinhardtii","glycine decarboxylase P-protein 2","protein_coding" "Cre12.g547400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g603225","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g603650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g606000","No alias","Chlamydomonas reinhardtii","elongation factor family protein","protein_coding" "Cre14.g611950","No alias","Chlamydomonas reinhardtii","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Cre14.g614750","No alias","Chlamydomonas reinhardtii","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "Cre14.g621751","No alias","Chlamydomonas reinhardtii","UDP-sugar pyrophosphorylase","protein_coding" "Cre15.g641700","No alias","Chlamydomonas reinhardtii","GCK domain-containing protein","protein_coding" "Cre16.g648000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g652050","No alias","Chlamydomonas reinhardtii","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Cre16.g674650","No alias","Chlamydomonas reinhardtii","Isochorismatase family protein","protein_coding" "Cre19.g750397","No alias","Chlamydomonas reinhardtii","plastid transcriptionally active 5","protein_coding" "evm.model.contig_2023.2","No alias","Porphyridium purpureum","(at4g00370 : 417.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (reliability: 834.0) & (original description: no original description)","protein_coding" "evm.model.contig_2031.20","No alias","Porphyridium purpureum","(at3g14415 : 415.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2). & (p05414|gox_spiol : 413.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 830.0) & (original description: no original description)","protein_coding" "evm.model.contig_2040.9","No alias","Porphyridium purpureum","(p13443|dhgy_cucsa : 422.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (at1g68010 : 412.0) Encodes hydroxypyruvate reductase.; hydroxypyruvate reductase (HPR); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1). & (reliability: 824.0) & (original description: no original description)","protein_coding" "evm.model.contig_2050.3","No alias","Porphyridium purpureum","(at5g26780 : 637.0) Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1.; serine hydroxymethyltransferase 2 (SHM2); FUNCTIONS IN: glycine hydroxymethyltransferase activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 11562 Blast hits to 11539 proteins in 2821 species: Archae - 258; Bacteria - 6362; Metazoa - 333; Fungi - 287; Plants - 321; Viruses - 6; Other Eukaryotes - 3995 (source: NCBI BLink). & (p50433|glym_soltu : 634.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1154.0) & (original description: no original description)","protein_coding" "evm.model.contig_2051.35","No alias","Porphyridium purpureum","(p49362|gcspb_flapr : 1084.0) Glycine dehydrogenase [decarboxylating] B, mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase B) (Glycine cleavage system P-protein B) - Flaveria pringlei & (at2g26080 : 1070.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (reliability: 2140.0) & (original description: no original description)","protein_coding" "evm.model.contig_2052.8","No alias","Porphyridium purpureum","(at5g35170 : 156.0) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (p43188|kadc_maize : 134.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.contig_2056.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2058.8","No alias","Porphyridium purpureum","(at3g61320 : 106.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "evm.model.contig_2062.19","No alias","Porphyridium purpureum","(at3g24430 : 234.0) encodes a MRP-like protein with a nucleotide-binding domain.; HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101); FUNCTIONS IN: ATP binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376), Protein of unknown function DUF59 (InterPro:IPR002744), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 16372 Blast hits to 16340 proteins in 2775 species: Archae - 600; Bacteria - 10162; Metazoa - 436; Fungi - 428; Plants - 202; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 468.0) & (original description: no original description)","protein_coding" "evm.model.contig_2062.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2073.13","No alias","Porphyridium purpureum","(at3g45780 : 100.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)","protein_coding" "evm.model.contig_2114.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2123.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2146.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2160.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2181.3","No alias","Porphyridium purpureum","(at1g67890 : 147.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.contig_2225.2","No alias","Porphyridium purpureum","(at2g21280 : 280.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)","protein_coding" "evm.model.contig_2259.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2271.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2276.2","No alias","Porphyridium purpureum","(at5g18660 : 356.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 712.0) & (original description: no original description)","protein_coding" "evm.model.contig_2276.3","No alias","Porphyridium purpureum","(at4g36530 : 197.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)","protein_coding" "evm.model.contig_2290.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2346.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2353.4","No alias","Porphyridium purpureum","(at1g32080 : 127.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)","protein_coding" "evm.model.contig_2354.2","No alias","Porphyridium purpureum","(p51061|capp2_soybn : 700.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Glycine max (Soybean) & (at1g53310 : 694.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1388.0) & (original description: no original description)","protein_coding" "evm.model.contig_2502.19","No alias","Porphyridium purpureum","(at1g74470 : 564.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (reliability: 1128.0) & (original description: no original description)","protein_coding" "evm.model.contig_2621.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2656.1","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 105.0) no description available & (p16016|cahc_spiol : 84.7) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Spinacia oleracea (Spinach) & (at5g14740 : 81.3) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)","protein_coding" "evm.model.contig_2656.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3417.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3422.5","No alias","Porphyridium purpureum","(at5g41080 : 97.1) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: senescence-related gene 3 (TAIR:AT3G02040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description)","protein_coding" "evm.model.contig_3422.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3427.1","No alias","Porphyridium purpureum","(at5g45680 : 91.7) Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen; FK506-binding protein 13 (FKBP13); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 16-2 (TAIR:AT4G39710.1); Has 10267 Blast hits to 9756 proteins in 1768 species: Archae - 130; Bacteria - 5575; Metazoa - 1746; Fungi - 494; Plants - 780; Viruses - 0; Other Eukaryotes - 1542 (source: NCBI BLink). & (q43207|fkb70_wheat : 88.2) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 180.2) & (original description: no original description)","protein_coding" "evm.model.contig_3433.5","No alias","Porphyridium purpureum","(at1g60550 : 308.0) enoyl-CoA hydratase/isomerase D (ECHID); FUNCTIONS IN: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity, catalytic activity; INVOLVED IN: vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Naphthoate synthase (InterPro:IPR010198), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase A (TAIR:AT4G16210.1); Has 35699 Blast hits to 35688 proteins in 2278 species: Archae - 489; Bacteria - 23573; Metazoa - 1539; Fungi - 813; Plants - 522; Viruses - 0; Other Eukaryotes - 8763 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description)","protein_coding" "evm.model.contig_3458.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3458.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3475.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3488.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3490.1","No alias","Porphyridium purpureum","(at3g14390 : 125.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)","protein_coding" "evm.model.contig_3495.2","No alias","Porphyridium purpureum","(at1g09340 : 335.0) Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.; chloroplast RNA binding (CRB); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast stem-loop binding protein of 41 kDa (TAIR:AT3G63140.1); Has 5936 Blast hits to 5936 proteins in 1402 species: Archae - 366; Bacteria - 3891; Metazoa - 108; Fungi - 58; Plants - 234; Viruses - 3; Other Eukaryotes - 1276 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "evm.model.contig_3509.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3543.3","No alias","Porphyridium purpureum","(at3g06920 : 93.2) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 81615 Blast hits to 15733 proteins in 342 species: Archae - 9; Bacteria - 150; Metazoa - 1130; Fungi - 1463; Plants - 75788; Viruses - 0; Other Eukaryotes - 3075 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 168.6) & (original description: no original description)","protein_coding" "evm.model.contig_3593.4","No alias","Porphyridium purpureum","(at3g10840 : 102.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_3705.1","No alias","Porphyridium purpureum","(p54260|gcst_soltu : 327.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Solanum tuberosum (Potato) & (at1g11860 : 312.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (reliability: 624.0) & (original description: no original description)","protein_coding" "evm.model.contig_436.9","No alias","Porphyridium purpureum","(p27141|cahc_tobac : 83.6) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 82.8) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description)","protein_coding" "evm.model.contig_4404.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.31","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_4426.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4432.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4435.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4442.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_445.1","No alias","Porphyridium purpureum","(at1g49580 : 130.0) Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19100.1); Has 118201 Blast hits to 116445 proteins in 3162 species: Archae - 162; Bacteria - 14319; Metazoa - 43815; Fungi - 12645; Plants - 25821; Viruses - 463; Other Eukaryotes - 20976 (source: NCBI BLink). & (p53681|crk_dauca : 129.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.contig_4467.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4476.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4590.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4594.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4604.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_469.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_482.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_482.13","No alias","Porphyridium purpureum","(at1g32080 : 182.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.contig_496.7","No alias","Porphyridium purpureum","(at1g68830 : 95.5) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description)","protein_coding" "evm.model.contig_496.8","No alias","Porphyridium purpureum","(at4g00550 : 344.0) encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.; digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6dw74|dgdg1_lotja : 342.0) Digalactosyldiacylglycerol synthase 1, chloroplast precursor (EC 2.4.1.241) - Lotus japonicus & (reliability: 688.0) & (original description: no original description)","protein_coding" "evm.model.contig_503.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_510.16","No alias","Porphyridium purpureum","(at5g24940 : 153.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "evm.model.contig_518.6","No alias","Porphyridium purpureum","(at5g11510 : 114.0) Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection.; myb domain protein 3r-4 (MYB3R-4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein (TAIR:AT4G32730.1); Has 13831 Blast hits to 8419 proteins in 581 species: Archae - 0; Bacteria - 44; Metazoa - 1293; Fungi - 976; Plants - 8377; Viruses - 6; Other Eukaryotes - 3135 (source: NCBI BLink). & (p20025|myb38_maize : 93.2) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 228.0) & (original description: no original description)","protein_coding" "evm.model.contig_530.4","No alias","Porphyridium purpureum","(p28723|fths_spiol : 711.0) Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS) - Spinacia oleracea (Spinach) & (at1g50480 : 701.0) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete; 10-formyltetrahydrofolate synthetase (THFS); FUNCTIONS IN: formate-tetrahydrofolate ligase activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, folic acid and derivative biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Formate-tetrahydrofolate ligase, FTHFS, conserved site (InterPro:IPR020628), Formate-tetrahydrofolate ligase, FTHFS (InterPro:IPR000559); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G12280.1); Has 7211 Blast hits to 7172 proteins in 1581 species: Archae - 30; Bacteria - 3794; Metazoa - 307; Fungi - 186; Plants - 64; Viruses - 0; Other Eukaryotes - 2830 (source: NCBI BLink). & (reliability: 1402.0) & (original description: no original description)","protein_coding" "evm.model.contig_532.10","No alias","Porphyridium purpureum","(at2g32480 : 195.0) Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.; ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description)","protein_coding" "evm.model.contig_583.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_584.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_588.4","No alias","Porphyridium purpureum","(at4g01690 : 363.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (o24163|ppoc_tobac : 358.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (reliability: 726.0) & (original description: no original description)","protein_coding" "evm.model.contig_611.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_614.1","No alias","Porphyridium purpureum","(at2g24200 : 181.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30920.1). & (q6k669|ampl2_orysa : 176.0) Leucine aminopeptidase 2, chloroplast precursor (EC 3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase 2) - Oryza sativa (Rice) & (reliability: 362.0) & (original description: no original description)","protein_coding" "evm.model.contig_614.7","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_662.2","No alias","Porphyridium purpureum","(at3g01090 : 169.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 162.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 332.0) & (original description: no original description)","protein_coding" "evm.model.contig_708.1","No alias","Porphyridium purpureum","(at3g61320 : 135.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)","protein_coding" "evm.model.contig_869.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.160","No alias","Cyanophora paradoxa","(at2g48060 : 83.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)","protein_coding" "evm.model.tig00000093.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.126","No alias","Cyanophora paradoxa","(at1g05460 : 147.0) Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.; SILENCING DEFECTIVE (SDE3); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: virus induced gene silencing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, UvrD/REP type (InterPro:IPR000212); BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 8827 Blast hits to 7137 proteins in 1206 species: Archae - 219; Bacteria - 2402; Metazoa - 1784; Fungi - 1431; Plants - 666; Viruses - 219; Other Eukaryotes - 2106 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description)","protein_coding" "evm.model.tig00000158.114","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.87","No alias","Cyanophora paradoxa","(at1g72200 : 83.6) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description)","protein_coding" "evm.model.tig00000219.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000227.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000269.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.49","No alias","Cyanophora paradoxa","(at4g08500 : 80.5) Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.; MAPK/ERK kinase kinase 1 (MEKK1); FUNCTIONS IN: protein binding, kinase binding, DNA binding, MAP kinase kinase kinase activity, kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 9 (TAIR:AT4G08480.1); Has 132336 Blast hits to 130259 proteins in 4567 species: Archae - 142; Bacteria - 14700; Metazoa - 49430; Fungi - 12971; Plants - 32949; Viruses - 685; Other Eukaryotes - 21459 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "evm.model.tig00000402.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000449.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000498.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000507.34","No alias","Cyanophora paradoxa","(at1g54960 : 284.0) member of MEKK subfamily; NPK1-related protein kinase 2 (NP2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135537 Blast hits to 133200 proteins in 4901 species: Archae - 150; Bacteria - 15240; Metazoa - 51035; Fungi - 12941; Plants - 33422; Viruses - 585; Other Eukaryotes - 22164 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 113.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 568.0) & (original description: no original description)","protein_coding" "evm.model.tig00000523.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000581.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000691.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000718.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000769.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000828.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000828.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000842.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000851.5","No alias","Cyanophora paradoxa","(at1g19780 : 119.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 106.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 232.0) & (original description: no original description)","protein_coding" "evm.model.tig00000881.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000984.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001041.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001056.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001094.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001206.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001249.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001249.8","No alias","Cyanophora paradoxa","(at5g53080 : 80.9) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description)","protein_coding" "evm.model.tig00001264.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001574.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020552.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020557.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.84","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020693.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020710.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020934.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020944.35","No alias","Cyanophora paradoxa","(at4g03550 : 160.0) Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.; glucan synthase-like 5 (GSL05); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: in 12 processes; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 1 (TAIR:AT4G04970.1); Has 1221 Blast hits to 894 proteins in 155 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 695; Plants - 448; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)","protein_coding" "evm.model.tig00020965.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021013.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021038.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021042.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021133.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021133.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021168.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021179.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021179.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021221.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021290.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021350.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021433.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021434.63","No alias","Cyanophora paradoxa","(at1g73920 : 164.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1707 Blast hits to 1690 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 1166; Fungi - 276; Plants - 162; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.tig00021489.31","No alias","Cyanophora paradoxa","(p26969|gcsp_pea : 979.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Pisum sativum (Garden pea) & (at4g33010 : 975.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1950.0) & (original description: no original description)","protein_coding" "evm.model.tig00021493.44","No alias","Cyanophora paradoxa","(at5g23630 : 145.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "evm.model.tig00021493.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021571.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "Glyma.01G038300","No alias","Glycine max","SIN3-like 4","protein_coding" "Glyma.01G052400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G079500","No alias","Glycine max","GRAS family transcription factor","protein_coding" "Glyma.01G089300","No alias","Glycine max","Hydroxyproline-rich glycoprotein family protein","protein_coding" "Glyma.01G142400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G173600","No alias","Glycine max","laccase 11","protein_coding" "Glyma.01G192300","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding" "Glyma.01G205700","No alias","Glycine max","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Glyma.01G213200","No alias","Glycine max","armadillo repeat kinesin 3","protein_coding" "Glyma.01G229200","No alias","Glycine max","RELA/SPOT homolog 3","protein_coding" "Glyma.01G231700","No alias","Glycine max","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding" "Glyma.01G244500","No alias","Glycine max","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding" "Glyma.02G019500","No alias","Glycine max","protein kinase 2B","protein_coding" "Glyma.02G032100","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "Glyma.02G047600","No alias","Glycine max","ferredoxin-NADP(+)-oxidoreductase 1","protein_coding" "Glyma.02G058800","No alias","Glycine max","G-box binding factor 1","protein_coding" "Glyma.02G101100","No alias","Glycine max","Hydroxyproline-rich glycoprotein family protein","protein_coding" "Glyma.02G101500","No alias","Glycine max","decapping 5","protein_coding" "Glyma.02G101700","No alias","Glycine max","decapping 5","protein_coding" "Glyma.02G102500","No alias","Glycine max","Putative endonuclease or glycosyl hydrolase","protein_coding" "Glyma.02G147300","No alias","Glycine max","chloroplast stem-loop binding protein of 41 kDa","protein_coding" "Glyma.02G151400","No alias","Glycine max","BRI1 suppressor 1 (BSU1)-like 1","protein_coding" "Glyma.02G153800","No alias","Glycine max","Cation efflux family protein","protein_coding" "Glyma.02G225300","No alias","Glycine max","FTSH protease 9","protein_coding" "Glyma.02G231100","No alias","Glycine max","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "Glyma.03G004900","No alias","Glycine max","ENTH/VHS family protein","protein_coding" "Glyma.03G036600","No alias","Glycine max","ovate family protein 2","protein_coding" "Glyma.03G037300","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "Glyma.03G058100","No alias","Glycine max","LMBR1-like membrane protein","protein_coding" "Glyma.03G110700","No alias","Glycine max","RWD domain-containing protein","protein_coding" "Glyma.03G117300","No alias","Glycine max","ATP-dependent caseinolytic (Clp) protease/crotonase family protein","protein_coding" "Glyma.03G128300","No alias","Glycine max","glutamate synthase 1","protein_coding" "Glyma.03G172700","No alias","Glycine max","pyrophosphorylase 4","protein_coding" "Glyma.03G207300","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding" "Glyma.03G262100","No alias","Glycine max","dicer-like 1","protein_coding" "Glyma.04G018500","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.04G023700","No alias","Glycine max","Pathogenesis-related thaumatin superfamily protein","protein_coding" "Glyma.04G027700","No alias","Glycine max","Transcription initiation factor IIF, beta subunit","protein_coding" "Glyma.04G051200","No alias","Glycine max","glycine decarboxylase P-protein 1","protein_coding" "Glyma.04G070200","No alias","Glycine max","LisH dimerisation motif;WD40/YVTN repeat-like-containing domain","protein_coding" "Glyma.04G075100","No alias","Glycine max","H(+)-ATPase 5","protein_coding" "Glyma.04G095800","No alias","Glycine max","RAB geranylgeranyl transferase alpha subunit 1","protein_coding" "Glyma.04G156200","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.04G158100","No alias","Glycine max","signal peptide peptidase","protein_coding" "Glyma.04G188700","No alias","Glycine max","RAB GTPase homolog E1B","protein_coding" "Glyma.04G192000","No alias","Glycine max","relative of early flowering 6","protein_coding" "Glyma.04G194200","No alias","Glycine max","AMP-dependent synthetase and ligase family protein","protein_coding" "Glyma.04G255100","No alias","Glycine max","Coatomer, alpha subunit","protein_coding" "Glyma.05G007200","No alias","Glycine max","DegP protease 1","protein_coding" "Glyma.05G014300","No alias","Glycine max","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "Glyma.05G064800","No alias","Glycine max","GATA transcription factor 26","protein_coding" "Glyma.05G079500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.05G214200","No alias","Glycine max","vacuolar H+-ATPase subunit E isoform 3","protein_coding" "Glyma.05G243200","No alias","Glycine max","plastid movement impaired1","protein_coding" "Glyma.06G017900","No alias","Glycine max","catalase 2","protein_coding" "Glyma.06G052100","No alias","Glycine max","glycine decarboxylase P-protein 2","protein_coding" "Glyma.06G076100","No alias","Glycine max","H(+)-ATPase 5","protein_coding" "Glyma.06G118000","No alias","Glycine max","subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex","protein_coding" "Glyma.06G127200","No alias","Glycine max","GHMP kinase family protein","protein_coding" "Glyma.06G145700","No alias","Glycine max","ABC2 homolog 13","protein_coding" "Glyma.06G146900","No alias","Glycine max","general control non-repressible 5","protein_coding" "Glyma.06G156600","No alias","Glycine max","amino acid permease 2","protein_coding" "Glyma.06G158200","No alias","Glycine max","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein","protein_coding" "Glyma.06G159800","No alias","Glycine max","ENTH/VHS/GAT family protein","protein_coding" "Glyma.06G171900","No alias","Glycine max","AMP-dependent synthetase and ligase family protein","protein_coding" "Glyma.06G173800","No alias","Glycine max","relative of early flowering 6","protein_coding" "Glyma.06G223500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.06G309600","No alias","Glycine max","DCD (Development and Cell Death) domain protein","protein_coding" "Glyma.06G324900","No alias","Glycine max","Protein of unknown function (DUF179)","protein_coding" "Glyma.07G013500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G019500","No alias","Glycine max","HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain","protein_coding" "Glyma.07G028800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.07G056200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.07G065000","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding" "Glyma.07G237000","No alias","Glycine max","O-acetyltransferase family protein","protein_coding" "Glyma.07G267800","No alias","Glycine max","oligopeptide transporter","protein_coding" "Glyma.07G273600","No alias","Glycine max","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Glyma.08G011100","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding" "Glyma.08G043000","No alias","Glycine max","jasmonate-zim-domain protein 3","protein_coding" "Glyma.08G051000","No alias","Glycine max","plastid movement impaired1","protein_coding" "Glyma.08G064600","No alias","Glycine max","K+ efflux antiporter 3","protein_coding" "Glyma.08G122700","No alias","Glycine max","Kinase-related protein of unknown function (DUF1296)","protein_coding" "Glyma.08G125600","No alias","Glycine max","UDP-glycosyltransferase 74 F1","protein_coding" "Glyma.08G126500","No alias","Glycine max","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding" "Glyma.08G133600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.08G174200","No alias","Glycine max","Translation initiation factor 2, small GTP-binding protein","protein_coding" "Glyma.08G197500","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding" "Glyma.08G204300","No alias","Glycine max","AMP-dependent synthetase and ligase family protein","protein_coding" "Glyma.08G266500","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding" "Glyma.08G279800","No alias","Glycine max","kinesin like protein for actin based chloroplast movement 1","protein_coding" "Glyma.08G302600","No alias","Glycine max","alanine:glyoxylate aminotransferase","protein_coding" "Glyma.09G030400","No alias","Glycine max","Coatomer epsilon subunit","protein_coding" "Glyma.09G031100","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding" "Glyma.09G038300","No alias","Glycine max","calmodulin binding;transcription regulators","protein_coding" "Glyma.09G074100","No alias","Glycine max","RED family protein","protein_coding" "Glyma.09G177600","No alias","Glycine max","protein tyrosine kinase family protein","protein_coding" "Glyma.09G188000","No alias","Glycine max","Fibronectin type III domain-containing protein","protein_coding" "Glyma.09G195400","No alias","Glycine max","diacylglycerol acyltransferase family","protein_coding" "Glyma.09G198400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G208500","No alias","Glycine max","basic region/leucine zipper transcription factor 16","protein_coding" "Glyma.09G223600","No alias","Glycine max","sigma factor A","protein_coding" "Glyma.09G247900","No alias","Glycine max","2-phosphoglycolate phosphatase 1","protein_coding" "Glyma.09G266200","No alias","Glycine max","AGAMOUS-like 20","protein_coding" "Glyma.10G026600","No alias","Glycine max","chloroplast stem-loop binding protein of 41 kDa","protein_coding" "Glyma.10G030600","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Glyma.10G049800","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.10G051200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.10G066300","No alias","Glycine max","ENTH/VHS family protein","protein_coding" "Glyma.10G108600","No alias","Glycine max","Cyclin-like family protein","protein_coding" "Glyma.10G144100","No alias","Glycine max","Carbohydrate-binding X8 domain superfamily protein","protein_coding" "Glyma.10G160400","No alias","Glycine max","with no lysine (K) kinase 1","protein_coding" "Glyma.10G167000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G192400","No alias","Glycine max","Beta-glucosidase, GBA2 type family protein","protein_coding" "Glyma.10G225102","No alias","Glycine max","Duplicated homeodomain-like superfamily protein","protein_coding" "Glyma.10G241000","No alias","Glycine max","phosphoglucomutase","protein_coding" "Glyma.10G280600","No alias","Glycine max","Nucleotide-diphospho-sugar transferase family protein","protein_coding" "Glyma.10G289700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G293500","No alias","Glycine max","Transketolase","protein_coding" "Glyma.11G028500","No alias","Glycine max","Sodium Bile acid symporter family","protein_coding" "Glyma.11G057500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G088600","No alias","Glycine max","Auxin efflux carrier family protein","protein_coding" "Glyma.11G089800","No alias","Glycine max","nodulin MtN21 /EamA-like transporter family protein","protein_coding" "Glyma.11G107600","No alias","Glycine max","glycosyl hydrolase family 35 protein","protein_coding" "Glyma.11G151100","No alias","Glycine max","Plant calmodulin-binding protein-related","protein_coding" "Glyma.11G175955","No alias","Glycine max","BRI1 suppressor 1 (BSU1)-like 2","protein_coding" "Glyma.11G188800","No alias","Glycine max","phosphoglycerate/bisphosphoglycerate mutase family protein","protein_coding" "Glyma.12G136600","No alias","Glycine max","kinesin 3","protein_coding" "Glyma.12G136800","No alias","Glycine max","formin homology5","protein_coding" "Glyma.12G177900","No alias","Glycine max","serine carboxypeptidase-like 48","protein_coding" "Glyma.12G183100","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "Glyma.12G188800","No alias","Glycine max","BEL1-like homeodomain 1","protein_coding" "Glyma.13G089700","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Glyma.13G137500","No alias","Glycine max","IQ-domain 2","protein_coding" "Glyma.13G209800","No alias","Glycine max","REF4-related 1","protein_coding" "Glyma.13G210800","No alias","Glycine max","glutamine synthetase 2","protein_coding" "Glyma.13G217000","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding" "Glyma.13G312900","No alias","Glycine max","BEL1-like homeodomain 1","protein_coding" "Glyma.13G326400","No alias","Glycine max","4-hydroxy-3-methylbut-2-enyl diphosphate synthase","protein_coding" "Glyma.13G345500","No alias","Glycine max","Plant protein of unknown function (DUF936)","protein_coding" "Glyma.13G370200","No alias","Glycine max","uridylyltransferase-related","protein_coding" "Glyma.14G094700","No alias","Glycine max","glycine decarboxylase P-protein 2","protein_coding" "Glyma.14G122000","No alias","Glycine max","tracheary element differentiation-related 7","protein_coding" "Glyma.14G133600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.14G139250","No alias","Glycine max","glucuronidase 3","protein_coding" "Glyma.14G159600","No alias","Glycine max","pectin methylesterase PCR fragment F","protein_coding" "Glyma.14G162400","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.14G174200","No alias","Glycine max","cryptochrome 1","protein_coding" "Glyma.15G003200","No alias","Glycine max","uridylyltransferase-related","protein_coding" "Glyma.15G028800","No alias","Glycine max","Plant protein of unknown function (DUF936)","protein_coding" "Glyma.15G058100","No alias","Glycine max","Cysteine proteinases superfamily protein","protein_coding" "Glyma.15G064500","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.15G096200","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "Glyma.15G136300","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding" "Glyma.15G165500","No alias","Glycine max","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding" "Glyma.15G213700","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding" "Glyma.15G253000","No alias","Glycine max","Translation initiation factor 2, small GTP-binding protein","protein_coding" "Glyma.16G095100","No alias","Glycine max","membrane protein, putative","protein_coding" "Glyma.16G125100","No alias","Glycine max","histidine kinase 1","protein_coding" "Glyma.16G219200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.17G016000","No alias","Glycine max","E1 C-terminal related 1","protein_coding" "Glyma.17G060100","No alias","Glycine max","OSBP(oxysterol binding protein)-related protein 4B","protein_coding" "Glyma.17G101700","No alias","Glycine max","D-ribulose-5-phosphate-3-epimerase","protein_coding" "Glyma.17G151300","No alias","Glycine max","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein","protein_coding" "Glyma.17G188300","No alias","Glycine max","ABC1 family protein","protein_coding" "Glyma.17G228800","No alias","Glycine max","glycine decarboxylase P-protein 2","protein_coding" "Glyma.18G001400","No alias","Glycine max","Sec23/Sec24 protein transport family protein","protein_coding" "Glyma.18G004100","No alias","Glycine max","Nucleic acid-binding proteins superfamily","protein_coding" "Glyma.18G049600","No alias","Glycine max","oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor","protein_coding" "Glyma.18G085500","No alias","Glycine max","PLC-like phosphodiesterase family protein","protein_coding" "Glyma.18G146600","No alias","Glycine max","kinesin like protein for actin based chloroplast movement 1","protein_coding" "Glyma.18G149600","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding" "Glyma.18G222100","No alias","Glycine max","zinc finger protein-related","protein_coding" "Glyma.18G263900","No alias","Glycine max","Cyclic nucleotide-regulated ion channel family protein","protein_coding" "Glyma.18G268900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.18G292600","No alias","Glycine max","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "Glyma.19G030800","No alias","Glycine max","HXXXD-type acyl-transferase family protein","protein_coding" "Glyma.19G130800","No alias","Glycine max","glutamate synthase 1","protein_coding" "Glyma.19G143900","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.19G155000","No alias","Glycine max","Plant protein of unknown function (DUF828)","protein_coding" "Glyma.19G159900","No alias","Glycine max","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding" "Glyma.19G192800","No alias","Glycine max","starch branching enzyme 2.1","protein_coding" "Glyma.19G228100","No alias","Glycine max","haloacid dehalogenase-like hydrolase family protein","protein_coding" "Glyma.20G107800","No alias","Glycine max","hydroxypyruvate reductase","protein_coding" "Glyma.20G122600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding" "Glyma.20G179100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.20G214000","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.20G217200","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "GRMZM2G010628","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G019090","No alias","Zea mays","glutathione S-transferase (class zeta) 2","protein_coding" "GRMZM2G052170","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G053720","No alias","Zea mays","Methylenetetrahydrofolate reductase family protein","protein_coding" "GRMZM2G065066","No alias","Zea mays","SC35-like splicing factor 30","protein_coding" "GRMZM2G074896","No alias","Zea mays","Glycosyltransferase family 61 protein","protein_coding" "GRMZM2G082916","No alias","Zea mays","sec7 domain-containing protein","protein_coding" "GRMZM2G089506","No alias","Zea mays","Eukaryotic aspartyl protease family protein","protein_coding" "GRMZM2G095598","No alias","Zea mays","CONSTANS-like 3","protein_coding" "GRMZM2G104310","No alias","Zea mays","glycine decarboxylase P-protein 1","protein_coding" "GRMZM2G116952","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G127150","No alias","Zea mays","Amino acid permease family protein","protein_coding" "GRMZM2G159134","No alias","Zea mays","ABA-responsive element binding protein 3","protein_coding" "GRMZM5G824629","No alias","Zea mays","ubiquitin-conjugating enzyme 32","protein_coding" "GRMZM5G827174","No alias","Zea mays","Protein of unknown function (DUF1005)","protein_coding" "GRMZM5G864414","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "HORVU1Hr1G002890.1","No alias","Hordeum vulgare","EC_2.3 acyltransferase","protein_coding" "HORVU2Hr1G017290.1","No alias","Hordeum vulgare","transcription factor *(DOF)","protein_coding" "HORVU2Hr1G021920.1","No alias","Hordeum vulgare","plastidial inner envelope protease *(AraSP)","protein_coding" "HORVU2Hr1G071980.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G086140.5","No alias","Hordeum vulgare","S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding" "HORVU2Hr1G094040.2","No alias","Hordeum vulgare","GRAS-type transcription factor","protein_coding" "HORVU2Hr1G106970.2","No alias","Hordeum vulgare","HD-ZIP IV-type transcription factor","protein_coding" "HORVU2Hr1G119460.2","No alias","Hordeum vulgare","pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU3Hr1G056270.2","No alias","Hordeum vulgare","polygalacturonase *(PGX1-like) & EC_3.2 glycosylase","protein_coding" "HORVU3Hr1G062900.2","No alias","Hordeum vulgare","wax ester synthase and diacylglycerol acyltransferase *(WSD)","protein_coding" "HORVU3Hr1G067110.1","No alias","Hordeum vulgare","glycine dehydrogenase component *(P-protein) of glycine cleavage system & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "HORVU3Hr1G105720.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G009160.1","No alias","Hordeum vulgare","EC_6.1 ligase forming carbon-oxygen bond","protein_coding" "HORVU4Hr1G009210.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G015740.1","No alias","Hordeum vulgare","LRR-XI protein kinase & systemic nitrogen signalling CEP-receptor kinase *(CEPR) & CEP-peptide receptor *(CEPR) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU4Hr1G016470.17","No alias","Hordeum vulgare","ABC1 atypical protein kinase","protein_coding" "HORVU4Hr1G056950.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G059860.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G071730.11","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G078540.12","No alias","Hordeum vulgare","regulatory protein *(MASP) of microtubule dynamics","protein_coding" "HORVU4Hr1G079330.1","No alias","Hordeum vulgare","pheophorbide a oxygenase *(PAO)","protein_coding" "HORVU4Hr1G089330.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G030500.4","No alias","Hordeum vulgare","quinolinate synthase & cysteine desulfurase activator component of plastidial SUF system assembly phase","protein_coding" "HORVU5Hr1G062450.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G001480.1","No alias","Hordeum vulgare","solute transporter *(AAAP)","protein_coding" "HORVU6Hr1G076810.1","No alias","Hordeum vulgare","subunit alpha of E1 subcomplex of pyruvate dehydrogenase complex & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding" "HORVU6Hr1G081890.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G070870.4","No alias","Hordeum vulgare","circadian clock core oscillator protein *(LHY/CCA1) & transcription factor *(REVEILLE)","protein_coding" "HORVU7Hr1G088210.25","No alias","Hordeum vulgare","subfamily ABCC transporter","protein_coding" "Kfl00004_0530","kfl00004_0530_v1.1","Klebsormidium nitens","(at3g63460 : 701.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (reliability: 1402.0) & (original description: no original description)","protein_coding" "Kfl00006_0410","kfl00006_0410_v1.1","Klebsormidium nitens","(at3g51650 : 139.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51640.1); Has 27645 Blast hits to 15097 proteins in 1246 species: Archae - 44; Bacteria - 3367; Metazoa - 10036; Fungi - 2690; Plants - 1205; Viruses - 196; Other Eukaryotes - 10107 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "Kfl00006_0860","kfl00006_0860_v1.1","Klebsormidium nitens","(at3g17770 : 684.0) Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT1G48430.1); Has 5081 Blast hits to 5076 proteins in 1119 species: Archae - 14; Bacteria - 4130; Metazoa - 96; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (reliability: 1368.0) & (original description: no original description)","protein_coding" "Kfl00008_0090","kfl00008_0090_v1.1","Klebsormidium nitens","(p31251|ube12_wheat : 1361.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at5g06460 : 1321.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2642.0) & (original description: no original description)","protein_coding" "Kfl00008_0560","kfl00008_0560_v1.1","Klebsormidium nitens","(q949g3|pdr1_nicpl : 408.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g16340 : 404.0) pleiotropic drug resistance 1 (PDR1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), Pleiotropic drug resistance protein PDR (InterPro:IPR005285), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1). & (reliability: 808.0) & (original description: no original description)","protein_coding" "Kfl00010_0250","kfl00010_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00012_0550","kfl00012_0550_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00014_0160","kfl00014_0160_v1.1","Klebsormidium nitens","(at2g04550 : 239.0) Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.; indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 3359 Blast hits to 3359 proteins in 285 species: Archae - 9; Bacteria - 32; Metazoa - 1975; Fungi - 228; Plants - 239; Viruses - 200; Other Eukaryotes - 676 (source: NCBI BLink). & (reliability: 478.0) & (original description: no original description)","protein_coding" "Kfl00014_0560","kfl00014_0560_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00019_0470","kfl00019_0470_v1.1","Klebsormidium nitens","(at4g11380 : 1289.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 2578.0) & (original description: no original description)","protein_coding" "Kfl00029_0060","kfl00029_0060_v1.1","Klebsormidium nitens","(at5g08415 : 425.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 850.0) & (original description: no original description)","protein_coding" "Kfl00030_0090","kfl00030_0090_v1.1","Klebsormidium nitens","(p24258|cah2_chlre : 108.0) Carbonic anhydrase 2 precursor (EC 4.2.1.1) (Carbonate dehydratase 2) (CA2) [Contains: Carbonic anhydrase 2 large chain; Carbonic anhydrase 2 small chain] - Chlamydomonas reinhardtii & (at1g08065 : 103.0) alpha carbonic anhydrase 5 (ACA5); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1); Has 3351 Blast hits to 3338 proteins in 543 species: Archae - 0; Bacteria - 710; Metazoa - 2051; Fungi - 82; Plants - 328; Viruses - 7; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)","protein_coding" "Kfl00033_0130","kfl00033_0130_v1.1","Klebsormidium nitens","(at1g14610 : 1150.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (reliability: 2300.0) & (original description: no original description)","protein_coding" "Kfl00034_0140","kfl00034_0140_v1.1","Klebsormidium nitens","(at2g42600 : 1167.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink). & (p51061|capp2_soybn : 1165.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Glycine max (Soybean) & (reliability: 2334.0) & (original description: no original description)","protein_coding" "Kfl00037_0020","kfl00037_0020_v1.1","Klebsormidium nitens","(at4g26750 : 230.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)","protein_coding" "Kfl00037_0210","kfl00037_0210_v1.1","Klebsormidium nitens","(p33126|hsp81_orysa : 995.0) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) - Oryza sativa (Rice) & (at5g56030 : 994.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.; heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1). & (reliability: 1988.0) & (original description: no original description)","protein_coding" "Kfl00039_0400","kfl00039_0400_v1.1","Klebsormidium nitens","(at2g17190 : 149.0) ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17200.1); Has 11292 Blast hits to 6186 proteins in 743 species: Archae - 6; Bacteria - 243; Metazoa - 4778; Fungi - 1683; Plants - 2450; Viruses - 166; Other Eukaryotes - 1966 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "Kfl00043_0340","kfl00043_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00046_0260","kfl00046_0260_v1.1","Klebsormidium nitens","(at3g20720 : 506.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 1012.0) & (original description: no original description)","protein_coding" "Kfl00054_0060","kfl00054_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00054_0190","kfl00054_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00056_0260","kfl00056_0260_v1.1","Klebsormidium nitens","(at3g04910 : 452.0) Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.; with no lysine (K) kinase 1 (WNK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, circadian rhythm; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G28080.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75kk8|mpk14_orysa : 99.0) Mitogen-activated protein kinase 14 (EC 2.7.11.24) (MAP kinase 14) - Oryza sativa (Rice) & (reliability: 828.0) & (original description: no original description)","protein_coding" "Kfl00057_0040","kfl00057_0040_v1.1","Klebsormidium nitens","(at1g22170 : 366.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (reliability: 710.0) & (original description: no original description)","protein_coding" "Kfl00061_0020","kfl00061_0020_v1.1","Klebsormidium nitens","(at3g28880 : 101.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)","protein_coding" "Kfl00062_0190","kfl00062_0190_v1.1","Klebsormidium nitens","(at5g19440 : 270.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51110|dfra_vitvi : 197.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 540.0) & (original description: no original description)","protein_coding" "Kfl00072_0240","kfl00072_0240_v1.1","Klebsormidium nitens","(at3g27740 : 551.0) carbamoyl phosphate synthetase small subunit mRNA (carA),; carbamoyl phosphate synthetase A (CARA); FUNCTIONS IN: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, catalytic activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Carbamoyl phosphate synthase, small subunit, N-terminal (InterPro:IPR002474), Glutamine amidotransferase type 1 (InterPro:IPR017926), Carbamoyl phosphate synthase, small subunit (InterPro:IPR006274), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 28262 Blast hits to 23423 proteins in 4115 species: Archae - 591; Bacteria - 17320; Metazoa - 1741; Fungi - 716; Plants - 245; Viruses - 0; Other Eukaryotes - 7649 (source: NCBI BLink). & (reliability: 1102.0) & (original description: no original description)","protein_coding" "Kfl00074_0110","kfl00074_0110_v1.1","Klebsormidium nitens","(at3g01780 : 1108.0) Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.; TPLATE; FUNCTIONS IN: binding; INVOLVED IN: pollen development, cytokinesis; LOCATED IN: nucleus, plasma membrane, cell plate, cytoplasm, phragmoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 18574 Blast hits to 8761 proteins in 652 species: Archae - 63; Bacteria - 685; Metazoa - 7555; Fungi - 1758; Plants - 703; Viruses - 446; Other Eukaryotes - 7364 (source: NCBI BLink). & (reliability: 2216.0) & (original description: no original description)","protein_coding" "Kfl00074_0120","kfl00074_0120_v1.1","Klebsormidium nitens","(at5g55040 : 82.0) DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain, conserved site (InterPro:IPR018359), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G20670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description)","protein_coding" "Kfl00075_0170","kfl00075_0170_v1.1","Klebsormidium nitens","(at2g28360 : 497.0) SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1543 Blast hits to 1191 proteins in 250 species: Archae - 2; Bacteria - 177; Metazoa - 564; Fungi - 334; Plants - 115; Viruses - 14; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 992.0) & (original description: no original description)","protein_coding" "Kfl00080_0050","kfl00080_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00092_0380","kfl00092_0380_v1.1","Klebsormidium nitens","(at3g63520 : 159.0) Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)","protein_coding" "Kfl00093_0330","kfl00093_0330_v1.1","Klebsormidium nitens","(at4g00290 : 149.0) Mechanosensitive ion channel protein; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS, transmembrane-2 (InterPro:IPR011014), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00234.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "Kfl00095_0070","kfl00095_0070_v1.1","Klebsormidium nitens","(at1g22410 : 681.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (p27608|arof_tobac : 676.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (reliability: 1362.0) & (original description: no original description)","protein_coding" "Kfl00097_0080","kfl00097_0080_v1.1","Klebsormidium nitens","(at5g47860 : 340.0) Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description)","protein_coding" "Kfl00100_0070","kfl00100_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00112_0080","kfl00112_0080_v1.1","Klebsormidium nitens","(at4g00900 : 1228.0) Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.; ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6atv4|aca2_orysa : 325.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2456.0) & (original description: no original description)","protein_coding" "Kfl00112_0210","kfl00112_0210_v1.1","Klebsormidium nitens","(at4g32710 : 219.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: proline extensin-like receptor kinase 1 (TAIR:AT3G24550.1); Has 121602 Blast hits to 120272 proteins in 4520 species: Archae - 116; Bacteria - 14308; Metazoa - 44161; Fungi - 10677; Plants - 33872; Viruses - 404; Other Eukaryotes - 18064 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 175.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 438.0) & (original description: no original description)","protein_coding" "Kfl00124_0350","kfl00124_0350_v1.1","Klebsormidium nitens","(at3g62130 : 326.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G26600.1); Has 4302 Blast hits to 4302 proteins in 1284 species: Archae - 105; Bacteria - 2583; Metazoa - 32; Fungi - 216; Plants - 120; Viruses - 0; Other Eukaryotes - 1246 (source: NCBI BLink). & (reliability: 652.0) & (original description: no original description)","protein_coding" "Kfl00132_0070","kfl00132_0070_v1.1","Klebsormidium nitens","(at3g08930 : 520.0) LMBR1-like membrane protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); BEST Arabidopsis thaliana protein match is: LMBR1-like membrane protein (TAIR:AT5G01460.1); Has 384 Blast hits to 384 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 85; Plants - 80; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 1040.0) & (original description: no original description)","protein_coding" "Kfl00133_0240","kfl00133_0240_v1.1","Klebsormidium nitens","(at4g30210 : 320.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (q05001|ncpr_catro : 316.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 640.0) & (original description: no original description)","protein_coding" "Kfl00134_0050","kfl00134_0050_v1.1","Klebsormidium nitens","(q42972|mdhg_orysa : 497.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Oryza sativa (Rice) & (at5g09660 : 483.0) encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 2 (PMDH2); FUNCTIONS IN: malate dehydrogenase activity; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome, microbody; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 966.0) & (original description: no original description)","protein_coding" "Kfl00135_0080","kfl00135_0080_v1.1","Klebsormidium nitens","(at4g21000 : 99.4) alpha carbonic anhydrase 6 (ACA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 4 (TAIR:AT4G20990.1); Has 3246 Blast hits to 3235 proteins in 536 species: Archae - 0; Bacteria - 711; Metazoa - 1969; Fungi - 83; Plants - 321; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (p20507|cah1_chlre : 87.8) Carbonic anhydrase 1 precursor (EC 4.2.1.1) (Carbonate dehydratase 1) (CA1) [Contains: Carbonic anhydrase 1 large chain; Carbonic anhydrase 1 small chain] - Chlamydomonas reinhardtii & (reliability: 198.8) & (original description: no original description)","protein_coding" "Kfl00136_0120","kfl00136_0120_v1.1","Klebsormidium nitens","(at4g30110 : 579.0) encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc; heavy metal atpase 2 (HMA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 4 (TAIR:AT2G19110.1); Has 39991 Blast hits to 32019 proteins in 3203 species: Archae - 837; Bacteria - 26240; Metazoa - 4077; Fungi - 2516; Plants - 2059; Viruses - 5; Other Eukaryotes - 4257 (source: NCBI BLink). & (q7xpy2|pma1_orysa : 120.0) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) - Oryza sativa (Rice) & (reliability: 1158.0) & (original description: no original description)","protein_coding" "Kfl00144_0250","kfl00144_0250_v1.1","Klebsormidium nitens","(at4g00370 : 134.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "Kfl00148_0200","kfl00148_0200_v1.1","Klebsormidium nitens","(at1g73750 : 320.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G15060.1); Has 187 Blast hits to 154 proteins in 46 species: Archae - 0; Bacteria - 64; Metazoa - 8; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 640.0) & (original description: no original description)","protein_coding" "Kfl00148_0270","kfl00148_0270_v1.1","Klebsormidium nitens","(at2g46020 : 1119.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 365.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2238.0) & (original description: no original description)","protein_coding" "Kfl00149_0100","kfl00149_0100_v1.1","Klebsormidium nitens","(at2g29650 : 617.0) Encodes an inorganic phosphate transporter that is localized to the thylakoid membrane.; anion transporter 1 (ANTR1); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1234.0) & (original description: no original description)","protein_coding" "Kfl00153_0130","kfl00153_0130_v1.1","Klebsormidium nitens","(at5g16520 : 191.0) unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)","protein_coding" "Kfl00155_0030","kfl00155_0030_v1.1","Klebsormidium nitens","(at5g24710 : 934.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 53337 Blast hits to 28879 proteins in 1972 species: Archae - 196; Bacteria - 12524; Metazoa - 15998; Fungi - 8175; Plants - 2336; Viruses - 1195; Other Eukaryotes - 12913 (source: NCBI BLink). & (reliability: 1868.0) & (original description: no original description)","protein_coding" "Kfl00159_0060","kfl00159_0060_v1.1","Klebsormidium nitens","(q96552|metl_catro : 659.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g01850 : 650.0) S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink). & (reliability: 1296.0) & (original description: no original description)","protein_coding" "Kfl00169_0020","kfl00169_0020_v1.1","Klebsormidium nitens","(p52780|syq_luplu : 1004.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 994.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (reliability: 1988.0) & (original description: no original description)","protein_coding" "Kfl00174_0120","kfl00174_0120_v1.1","Klebsormidium nitens","(at3g43300 : 1318.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (reliability: 2636.0) & (original description: no original description)","protein_coding" "Kfl00187_0240","kfl00187_0240_v1.1","Klebsormidium nitens","(at3g45240 : 323.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 1 (GRIK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 2 (TAIR:AT5G60550.1). & (q6x4a2|cipk1_orysa : 131.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: no original description)","protein_coding" "Kfl00189_0200","kfl00189_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00193_0170","kfl00193_0170_v1.1","Klebsormidium nitens","(at3g60600 : 183.0) Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1); FUNCTIONS IN: protein binding; INVOLVED IN: intracellular transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: plant VAP homolog 12 (TAIR:AT2G45140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 366.0) & (original description: no original description)","protein_coding" "Kfl00209_0020","kfl00209_0020_v1.1","Klebsormidium nitens","(at1g64570 : 136.0) DUO POLLEN 3 (DUO3); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); Has 1836 Blast hits to 1575 proteins in 289 species: Archae - 4; Bacteria - 248; Metazoa - 589; Fungi - 287; Plants - 112; Viruses - 46; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "Kfl00215_0180","kfl00215_0180_v1.1","Klebsormidium nitens","(at5g65620 : 942.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G10540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1884.0) & (original description: no original description)","protein_coding" "Kfl00216_0140","kfl00216_0140_v1.1","Klebsormidium nitens","(at1g13980 : 1073.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 2146.0) & (original description: no original description)","protein_coding" "Kfl00224_0050","kfl00224_0050_v1.1","Klebsormidium nitens","(q8ru33|va0d_orysa : 598.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (at3g28715 : 593.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28710.1). & (reliability: 1186.0) & (original description: no original description)","protein_coding" "Kfl00227_0060","kfl00227_0060_v1.1","Klebsormidium nitens","(at2g45540 : 892.0) WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1). & (reliability: 1784.0) & (original description: no original description)","protein_coding" "Kfl00232_0230","kfl00232_0230_v1.1","Klebsormidium nitens","(at3g11130 : 2670.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 5340.0) & (original description: no original description)","protein_coding" "Kfl00235_0200","kfl00235_0200_v1.1","Klebsormidium nitens","(at5g23630 : 1343.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6atv4|aca2_orysa : 82.8) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 2686.0) & (original description: no original description)","protein_coding" "Kfl00286_0030","kfl00286_0030_v1.1","Klebsormidium nitens","(at2g04360 : 165.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description)","protein_coding" "Kfl00292_0100","kfl00292_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00305_0130","kfl00305_0130_v1.1","Klebsormidium nitens","(at2g22250 : 506.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1012.0) & (original description: no original description)","protein_coding" "Kfl00314_0100","kfl00314_0100_v1.1","Klebsormidium nitens","(at5g15070 : 1080.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2). & (reliability: 2160.0) & (original description: no original description)","protein_coding" "Kfl00342_0180","kfl00342_0180_v1.1","Klebsormidium nitens","(p35130|ubc2_medsa : 263.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (at2g02760 : 262.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (reliability: 524.0) & (original description: no original description)","protein_coding" "Kfl00351_0100","kfl00351_0100_v1.1","Klebsormidium nitens","(at4g19390 : 153.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description)","protein_coding" "Kfl00352_0150","kfl00352_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00358_0130","kfl00358_0130_v1.1","Klebsormidium nitens","(at5g38710 : 268.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)","protein_coding" "Kfl00374_0010","kfl00374_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00378_0030","kfl00378_0030_v1.1","Klebsormidium nitens","(at3g52640 : 397.0) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) & (original description: no original description)","protein_coding" "Kfl00388_0070","kfl00388_0070_v1.1","Klebsormidium nitens","(at2g42810 : 714.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p48489|pp1_orysa : 223.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 1428.0) & (original description: no original description)","protein_coding" "Kfl00439_0060","kfl00439_0060_v1.1","Klebsormidium nitens","(at4g37040 : 394.0) encodes a methionine aminopeptidase; methionine aminopeptidase 1D (MAP1D); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 788.0) & (original description: no original description)","protein_coding" "Kfl00443_0040","kfl00443_0040_v1.1","Klebsormidium nitens","(q7xpy2|pma1_orysa : 425.0) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) - Oryza sativa (Rice) & (at2g18960 : 422.0) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.; H(+)-ATPase 1 (HA1); FUNCTIONS IN: protein binding, ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to water deprivation, proton transport, response to abscisic acid stimulus, regulation of stomatal movement; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37421 Blast hits to 33000 proteins in 3185 species: Archae - 713; Bacteria - 23967; Metazoa - 3870; Fungi - 2594; Plants - 1874; Viruses - 3; Other Eukaryotes - 4400 (source: NCBI BLink). & (reliability: 844.0) & (original description: no original description)","protein_coding" "Kfl00478_0030","kfl00478_0030_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00488_0090","kfl00488_0090_v1.1","Klebsormidium nitens","(at2g20900 : 290.0) diacylglycerol kinase 5 (DGK5); FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756), Diacylglycerol kinase, plant (InterPro:IPR016961); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase 6 (TAIR:AT4G28130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)","protein_coding" "Kfl00529_0010","kfl00529_0010_v1.1","Klebsormidium nitens","(at3g16860 : 194.0) COBRA-like protein 8 precursor (COBL8); CONTAINS InterPro DOMAIN/s: Glycosyl-phosphatidyl inositol-anchored, plant (InterPro:IPR006918); BEST Arabidopsis thaliana protein match is: COBRA-like protein-7 precursor (TAIR:AT4G16120.1); Has 377 Blast hits to 368 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 377; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7xr91|cobl7_orysa : 149.0) COBRA-like 7 protein precursor (BRITTLE CULM1-like 3 protein) - Oryza sativa (Rice) & (reliability: 388.0) & (original description: no original description)","protein_coding" "Kfl00548_0130","kfl00548_0130_v1.1","Klebsormidium nitens","(at1g31730 : 839.0) Adaptin family protein; FUNCTIONS IN: clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Adaptor protein complex AP-4, epsilon subunit (InterPro:IPR017109), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 4728 Blast hits to 3440 proteins in 365 species: Archae - 0; Bacteria - 98; Metazoa - 1563; Fungi - 860; Plants - 412; Viruses - 3; Other Eukaryotes - 1792 (source: NCBI BLink). & (reliability: 1678.0) & (original description: no original description)","protein_coding" "Kfl00566_0070","kfl00566_0070_v1.1","Klebsormidium nitens","(at1g29150 : 501.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 1002.0) & (original description: no original description)","protein_coding" "Kfl00582_0010","kfl00582_0010_v1.1","Klebsormidium nitens","(o04226|p5cs_orysa : 796.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at3g55610 : 785.0) encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner.; delta 1-pyrroline-5-carboxylate synthase 2 (P5CS2); FUNCTIONS IN: oxidoreductase activity, catalytic activity, glutamate 5-kinase activity; INVOLVED IN: hyperosmotic salinity response, proline biosynthetic process, response to abscisic acid stimulus, embryo development ending in seed dormancy; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta1-pyrroline-5-carboxylate synthase 1 (TAIR:AT2G39800.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1570.0) & (original description: no original description)","protein_coding" "Kfl00637_0110","kfl00637_0110_v1.1","Klebsormidium nitens","(q7x7l3|elp3_orysa : 899.0) Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) & (at5g50320 : 887.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; ELONGATA 3 (ELO3); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Histone acetyltransferase ELP3 (InterPro:IPR005910), Radical SAM (InterPro:IPR007197), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1774.0) & (original description: no original description)","protein_coding" "Kfl00668_0010","kfl00668_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00674_0010","kfl00674_0010_v1.1","Klebsormidium nitens","(p93338|gapn_nicpl : 823.0) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) - Nicotiana plumbagin & (at2g24270 : 814.0) Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.; aldehyde dehydrogenase 11A3 (ALDH11A3); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1). & (reliability: 1628.0) & (original description: no original description)","protein_coding" "Kfl00678_0080","kfl00678_0080_v1.1","Klebsormidium nitens","(q8vyx2|akt1_orysa : 272.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (at5g37500 : 268.0) Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)","protein_coding" "Kfl00699_0050","kfl00699_0050_v1.1","Klebsormidium nitens","(o49954|gcsp_soltu : 1348.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at4g33010 : 1341.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2682.0) & (original description: no original description)","protein_coding" "Kfl00714_0050","kfl00714_0050_v1.1","Klebsormidium nitens","(at3g60860 : 1621.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 3242.0) & (original description: no original description)","protein_coding" "Kfl00722_0070","kfl00722_0070_v1.1","Klebsormidium nitens","(at1g29900 : 1602.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 3204.0) & (original description: no original description)","protein_coding" "Kfl00766_0040","kfl00766_0040_v1.1","Klebsormidium nitens","(at5g17420 : 814.0) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).; IRREGULAR XYLEM 3 (IRX3); FUNCTIONS IN: cellulose synthase activity; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis, secondary cell wall biogenesis, rhamnogalacturonan I side chain metabolic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Cellulose synthase family protein (TAIR:AT5G05170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1628.0) & (original description: no original description)","protein_coding" "Kfl00868_0030","kfl00868_0030_v1.1","Klebsormidium nitens","(at3g25900 : 87.0) HMT-1; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1). & (q9fum7|hmt4_maize : 85.1) Homocysteine S-methyltransferase 4 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 4) (SMM:Hcy S-methyltransferase 4) (ZmHMT-4) - Zea mays (Maize) & (reliability: 174.0) & (original description: no original description)","protein_coding" "Kfl00885_0010","kfl00885_0010_v1.1","Klebsormidium nitens","(at1g68750 : 754.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (q6r2v6|capp2_chlre : 680.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 1508.0) & (original description: no original description)","protein_coding" "Kfl00888_0010","kfl00888_0010_v1.1","Klebsormidium nitens","(at1g53050 : 545.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (q38772|cdc2a_antma : 209.0) Cell division control protein 2 homolog A (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 1016.0) & (original description: no original description)","protein_coding" "Kfl00899_0050","kfl00899_0050_v1.1","Klebsormidium nitens","(at2g17970 : 322.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G36090.2). & (reliability: 644.0) & (original description: no original description)","protein_coding" "Kfl01076_0020","kfl01076_0020_v1.1","Klebsormidium nitens","(at5g20380 : 489.0) Encodes an inorganic phosphate transporter (PHT4;5).; phosphate transporter 4;5 (PHT4;5); FUNCTIONS IN: inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 43170 Blast hits to 43076 proteins in 2553 species: Archae - 690; Bacteria - 35592; Metazoa - 2424; Fungi - 1396; Plants - 508; Viruses - 0; Other Eukaryotes - 2560 (source: NCBI BLink). & (reliability: 978.0) & (original description: no original description)","protein_coding" "Kfl01253_0010","kfl01253_0010_v1.1","Klebsormidium nitens","(at3g16270 : 241.0) ENTH/VHS family protein; INVOLVED IN: intracellular protein transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Epsin, N-terminal (InterPro:IPR001026), ENTH/VHS (InterPro:IPR008942); Has 168 Blast hits to 159 proteins in 72 species: Archae - 0; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "Kfl01343_0010","kfl01343_0010_v1.1","Klebsormidium nitens","(at3g15850 : 306.0) Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.; fatty acid desaturase 5 (FAD5); CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT3G15870.1); Has 3424 Blast hits to 3424 proteins in 822 species: Archae - 0; Bacteria - 1534; Metazoa - 801; Fungi - 236; Plants - 106; Viruses - 4; Other Eukaryotes - 743 (source: NCBI BLink). & (reliability: 612.0) & (original description: no original description)","protein_coding" "Kfl01726_0010","kfl01726_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g07090","No alias","Oryza sativa","5-azacytidine resistance protein azr1, putative, expressed","protein_coding" "LOC_Os01g10810","No alias","Oryza sativa","rho termination factor, N-terminal domain containing protein, expressed","protein_coding" "LOC_Os01g11946","No alias","Oryza sativa","ABC transporter, ATP-binding protein, putative, expressed","protein_coding" "LOC_Os01g50860","No alias","Oryza sativa","chloride transporter, chloride channel family, putative, expressed","protein_coding" "LOC_Os01g51410","No alias","Oryza sativa","glycine dehydrogenase, putative, expressed","protein_coding" "LOC_Os01g63230","No alias","Oryza sativa","growth regulator related protein, putative, expressed","protein_coding" "LOC_Os01g71190","No alias","Oryza sativa","photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os01g73580","No alias","Oryza sativa","glycosyl hydrolases, putative, expressed","protein_coding" "LOC_Os02g02520","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g33010","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g47800","No alias","Oryza sativa","monodehydroascorbate reductase, putative, expressed","protein_coding" "LOC_Os02g50780","No alias","Oryza sativa","glycosyl hydrolase family 47 domain contain protein, expressed","protein_coding" "LOC_Os02g52650","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding" "LOC_Os03g03910","No alias","Oryza sativa","catalase domain containing protein, expressed","protein_coding" "LOC_Os03g29970","No alias","Oryza sativa","histone-like transcription factor and archaeal histone, putative, expressed","protein_coding" "LOC_Os03g51020","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g32430","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g36760","No alias","Oryza sativa","enzyme of the cupin superfamily protein, putative, expressed","protein_coding" "LOC_Os04g38600","No alias","Oryza sativa","glyceraldehyde-3-phosphate dehydrogenase, putative, expressed","protein_coding" "LOC_Os04g41340","No alias","Oryza sativa","4-nitrophenylphosphatase, putative, expressed","protein_coding" "LOC_Os05g02420","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g49380","No alias","Oryza sativa","OsDegp9 - Putative Deg protease homologue, expressed","protein_coding" "LOC_Os06g07790","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os06g09820","No alias","Oryza sativa","cupin superfamily protein, putative, expressed","protein_coding" "LOC_Os06g40940","No alias","Oryza sativa","glycine dehydrogenase, putative, expressed","protein_coding" "LOC_Os06g51290","No alias","Oryza sativa","phytoene synthase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os07g01214","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os08g29170","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding" "LOC_Os09g02400","No alias","Oryza sativa","RNA-binding region RNP-1, putative, expressed","protein_coding" "LOC_Os10g01044","No alias","Oryza sativa","isoflavone reductase, putative, expressed","protein_coding" "LOC_Os10g38710","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding" "LOC_Os10g41710","No alias","Oryza sativa","chaperonin, putative, expressed","protein_coding" "LOC_Os11g31900","No alias","Oryza sativa","acyl carrier protein, putative, expressed","protein_coding" "LOC_Os11g32320","No alias","Oryza sativa","CCB1, putative, expressed","protein_coding" "LOC_Os11g47980","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g16240","No alias","Oryza sativa","nmrA-like family domain containing protein, expressed","protein_coding" "LOC_Os12g23180","No alias","Oryza sativa","3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed","protein_coding" "Mp1g01200.1","No alias","Marchantia polymorpha","UPF1 Nonsense-Mediated mRNA Decay effector protein","protein_coding" "Mp1g03970.1","No alias","Marchantia polymorpha","flavodiiron protein of pseudo-cyclic electron flow","protein_coding" "Mp1g08410.1","No alias","Marchantia polymorpha","chromatin remodeling factor (ERCC6). DNA repair protein (CSB)","protein_coding" "Mp1g16110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g18590.1","No alias","Marchantia polymorpha","protein kinase (DYRK)","protein_coding" "Mp1g19210.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding" "Mp1g20850.1","No alias","Marchantia polymorpha","regulatory cofactor (RST1) of exosome complex","protein_coding" "Mp1g24070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g25620.1","No alias","Marchantia polymorpha","regulatory subunit beta of SNF1-related SnRK1 kinase complex. regulatory subunit beta of SnRK1 kinase complex","protein_coding" "Mp1g26300.1","No alias","Marchantia polymorpha","STIG1/GRI precursor polypeptide","protein_coding" "Mp1g26860.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g11860.1","No alias","Marchantia polymorpha","RING-H2-class E3 ligase","protein_coding" "Mp2g21640.1","No alias","Marchantia polymorpha","Caffeoylshikimate esterase OS=Arabidopsis thaliana (sp|q9c942|cse_arath : 219.0)","protein_coding" "Mp2g23580.1","No alias","Marchantia polymorpha","RbcX assembly factor involved in RuBisCo assembly","protein_coding" "Mp2g23610.1","No alias","Marchantia polymorpha","DNA repair protein (XPC)","protein_coding" "Mp2g26740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g00930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g17870.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g25460.1","No alias","Marchantia polymorpha","protein kinase (PEK). regulator component SPA of COP1-SPA E3 ligase subcomplex. regulator component SPA of COP1-SPA light signal transduction ubiquitin E3 ligase complex","protein_coding" "Mp4g05600.1","No alias","Marchantia polymorpha","myotubularin lipid phosphatase","protein_coding" "Mp4g06780.1","No alias","Marchantia polymorpha","male gamete adhesion factor (GEX2)","protein_coding" "Mp4g14080.1","No alias","Marchantia polymorpha","WEE1 cell cycle interphase regulator kinase. protein kinase (WEE)","protein_coding" "Mp4g17730.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g03020.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding" "Mp5g06790.1","No alias","Marchantia polymorpha","subfamily ABCC transporter","protein_coding" "Mp5g18530.1","No alias","Marchantia polymorpha","Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana (sp|q9flw0|y5241_arath : 179.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 92.9)","protein_coding" "Mp5g19070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g08420.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g08570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g17030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g19380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g08890.1","No alias","Marchantia polymorpha","glycine dehydrogenase component P-protein of glycine cleavage system","protein_coding" "Mp7g11430.1","No alias","Marchantia polymorpha","terminal oxidase (PTOX)","protein_coding" "Mp8g00470.1","No alias","Marchantia polymorpha","tetraketide alpha-pyrone reductase (TKPR)","protein_coding" "Mp8g00660.1","No alias","Marchantia polymorpha","Glycosyltransferase family 92 protein Os08g0121900 OS=Oryza sativa subsp. japonica (sp|q6yrm6|y8219_orysj : 278.0)","protein_coding" "Mp8g01780.1","No alias","Marchantia polymorpha","component Pex5 of cargo-receptor system","protein_coding" "Mp8g02830.1","No alias","Marchantia polymorpha","Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana (sp|q9s9n9|ccr1_arath : 222.0)","protein_coding" "Mp8g08900.1","No alias","Marchantia polymorpha","Probable histidine kinase 5 OS=Oryza sativa subsp. japonica (sp|a1a697|ohk5_orysj : 185.0)","protein_coding" "Mp8g12690.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g12800.1","No alias","Marchantia polymorpha","transcription factor (NLP)","protein_coding" "Mp8g16060.1","No alias","Marchantia polymorpha","uricase","protein_coding" "Mp8g16540.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g18740.1","No alias","Marchantia polymorpha","Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana (sp|q71n54|lcat4_arath : 504.0)","protein_coding" "Potri.006G229300","No alias","Populus trichocarpa","glycine decarboxylase P-protein 1","protein_coding" "Potri.018G053640","No alias","Populus trichocarpa","glycine decarboxylase P-protein 1","protein_coding" "Potri.018G053680","No alias","Populus trichocarpa","glycine decarboxylase P-protein 1","protein_coding" "Pp1s103_67V6","No alias","Physcomitrella patens","ycf37 (arabidopsis homolog of synechocystis ycf37)","protein_coding" "Pp1s112_169V6","No alias","Physcomitrella patens","cytochrome b6-f complex iron-sulfur subunit","protein_coding" "Pp1s114_123V6","No alias","Physcomitrella patens","uroporphyrinogen decarboxylase","protein_coding" "Pp1s125_77V6","No alias","Physcomitrella patens","abc transporter family protein","protein_coding" "Pp1s129_61V6","No alias","Physcomitrella patens","heavy metal-associated domain containing expressed","protein_coding" "Pp1s129_62V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s13_405V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s145_159V6","No alias","Physcomitrella patens","pgr5-like a","protein_coding" "Pp1s146_112V6","No alias","Physcomitrella patens","protochlorophyllide reductase b","protein_coding" "Pp1s146_17V6","No alias","Physcomitrella patens","stearoyl-acyl carrier protein desaturase","protein_coding" "Pp1s15_181V6","No alias","Physcomitrella patens","starch branching enzyme i","protein_coding" "Pp1s15_409V6","No alias","Physcomitrella patens","photosystem ii 10 kda polypeptide","protein_coding" "Pp1s15_499V6","No alias","Physcomitrella patens","glycine cleavage system p-protein","protein_coding" "Pp1s15_500V6","No alias","Physcomitrella patens","glycine cleavage system p-protein","protein_coding" "Pp1s170_1V6","No alias","Physcomitrella patens","F24K9.30; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s171_85V6","No alias","Physcomitrella patens","tir-nbs resistance protein","protein_coding" "Pp1s197_146V6","No alias","Physcomitrella patens","nitrite reductase","protein_coding" "Pp1s197_85V6","No alias","Physcomitrella patens","copper-transporting atpase","protein_coding" "Pp1s19_25V6","No alias","Physcomitrella patens","aminotransferase 2","protein_coding" "Pp1s1_594V6","No alias","Physcomitrella patens","annexin a4","protein_coding" "Pp1s211_145V6","No alias","Physcomitrella patens","zeta-carotene desaturase","protein_coding" "Pp1s237_53V6","No alias","Physcomitrella patens","F1N21.23; exostosin family protein [Arabidopsis thaliana]","protein_coding" "Pp1s240_18V6","No alias","Physcomitrella patens","F5H14.20; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s241_62V6","No alias","Physcomitrella patens","contains ESTs AU101298(E4372),D48939(S15524) similar to Arabidopsis thaliana chromosome 1, F25A4.30 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding" "Pp1s245_12V6","No alias","Physcomitrella patens","s-adenosylmethionine-dependent methyltransferase","protein_coding" "Pp1s263_33V6","No alias","Physcomitrella patens","plastoquinol-plastocyanin reductase","protein_coding" "Pp1s273_61V6","No alias","Physcomitrella patens","MBB18.21; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s276_86V6","No alias","Physcomitrella patens","glycine cleavage system p-protein","protein_coding" "Pp1s290_42V6","No alias","Physcomitrella patens","chlorophyllide a oxygenase","protein_coding" "Pp1s293_101V6","No alias","Physcomitrella patens","F13I13.5; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s294_44V6","No alias","Physcomitrella patens","MBK21.23; short-chain dehydrogenase/reductase (SDR) family protein [EC:1.3.1.34] [Arabidopsis thaliana]","protein_coding" "Pp1s299_3V6","No alias","Physcomitrella patens","phosphoribulokinase precursor","protein_coding" "Pp1s30_358V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s317_49V6","No alias","Physcomitrella patens","thioredoxin m -","protein_coding" "Pp1s33_305V6","No alias","Physcomitrella patens","F20D21.21; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s341_73V6","No alias","Physcomitrella patens","alanine aminotransferase","protein_coding" "Pp1s34_427V6","No alias","Physcomitrella patens","nig (nsp (nuclear shuttle protein)-interacting gtpase) gtp binding gtpase","protein_coding" "Pp1s350_40V6","No alias","Physcomitrella patens","pyridoxine biosynthesis protein","protein_coding" "Pp1s35_179V6","No alias","Physcomitrella patens","family protein","protein_coding" "Pp1s35_69V6","No alias","Physcomitrella patens","F2J7.10; zinc finger (B-box type) family protein [Arabidopsis thaliana]","protein_coding" "Pp1s364_14V6","No alias","Physcomitrella patens","F24B18.9; CONSTANS B-box zinc finger family protein [Arabidopsis thaliana]","protein_coding" "Pp1s367_39V6","No alias","Physcomitrella patens","cytochrome p450","protein_coding" "Pp1s375_27V6","No alias","Physcomitrella patens","cyclase dehydrase","protein_coding" "Pp1s378_29V6","No alias","Physcomitrella patens","MTG10.17; hypothetical protein [Arabidopsis thaliana]","protein_coding" "Pp1s378_41V6","No alias","Physcomitrella patens","ribulose bisphosphate carboxylase oxygenase chloroplast","protein_coding" "Pp1s378_8V6","No alias","Physcomitrella patens","50s ribosomal protein l31","protein_coding" "Pp1s379_10V6","No alias","Physcomitrella patens","kinesin like protein","protein_coding" "Pp1s379_12V6","No alias","Physcomitrella patens","StAR-related lipid transfer protein 7 (StARD7) (START domain-containing protein 7) (Protein GTT1) [Homo sapiens]","protein_coding" "Pp1s41_319V6","No alias","Physcomitrella patens","arginine decarboxylase","protein_coding" "Pp1s422_8V6","No alias","Physcomitrella patens","catalase","protein_coding" "Pp1s447_16V6","No alias","Physcomitrella patens","universal stress protein family protein","protein_coding" "Pp1s458_5V6","No alias","Physcomitrella patens","MXC7.11; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s45_36V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s46_272V6","No alias","Physcomitrella patens","dna binding protein","protein_coding" "Pp1s46_42V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding" "Pp1s475_17V6","No alias","Physcomitrella patens","hypothetical protein [Cyanidioschyzon merolae]","protein_coding" "Pp1s475_26V6","No alias","Physcomitrella patens","mitochondrial carrier protein","protein_coding" "Pp1s495_14V6","No alias","Physcomitrella patens","abc transporter family protein","protein_coding" "Pp1s519_7V6","No alias","Physcomitrella patens","alpha beta hydrolase fold","protein_coding" "Pp1s53_206V6","No alias","Physcomitrella patens","ppx phosphatase","protein_coding" "Pp1s53_229V6","No alias","Physcomitrella patens","F3E22.4; mov34 family protein [Arabidopsis thaliana]","protein_coding" "Pp1s545_4V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding" "Pp1s55_140V6","No alias","Physcomitrella patens","mrna-binding protein","protein_coding" "Pp1s55_291V6","No alias","Physcomitrella patens","LOC474779 [Canis familiaris]","protein_coding" "Pp1s5_291V6","No alias","Physcomitrella patens","acyltransferase like 1","protein_coding" "Pp1s65_255V6","No alias","Physcomitrella patens","haloacid dehalogenase-like hydrolase domain containing 3","protein_coding" "Pp1s67_243V6","No alias","Physcomitrella patens","GH3-like protein 1 (GH3-like protein)","protein_coding" "Pp1s67_83V6","No alias","Physcomitrella patens","protein binding","protein_coding" "Pp1s68_264V6","No alias","Physcomitrella patens","delta 9","protein_coding" "Pp1s69_37V6","No alias","Physcomitrella patens","dna binding","protein_coding" "Pp1s6_56V6","No alias","Physcomitrella patens","nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30","protein_coding" "Pp1s70_12V6","No alias","Physcomitrella patens","heat shock protein 70 -interacting","protein_coding" "Pp1s77_163V6","No alias","Physcomitrella patens","elip3 gene for putative early light-induced protein ELIP3","protein_coding" "Pp1s7_232V6","No alias","Physcomitrella patens","haloacid dehalogenase-like hydrolase domain containing 3","protein_coding" "Pp1s7_259V6","No alias","Physcomitrella patens","T24H18.70; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s7_56V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding" "Pp1s83_144V6","No alias","Physcomitrella patens","phosphoenolpyruvate carboxylase","protein_coding" "Pp1s83_159V6","No alias","Physcomitrella patens","F24J13.5; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s86_156V6","No alias","Physcomitrella patens","glyceraldehyde-3-phosphate dehydrogenase","protein_coding" "Pp1s8_244V6","No alias","Physcomitrella patens","F12M12.200; 17.4 kDa class I heat shock protein (HSP17.4-CI) [Arabidopsis thaliana]","protein_coding" "Pp1s99_95V6","No alias","Physcomitrella patens","lhcsr2 gene for putative putative chlorophyll a-b binding protein LHCSR2","protein_coding" "PSME_00000035-RA","No alias","Pseudotsuga menziesii","(at1g58200 : 572.0) A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.; MSCS-like 3 (MSL3); FUNCTIONS IN: ion channel activity; INVOLVED IN: plastid organization, response to osmotic stress; LOCATED IN: membrane, plastid envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: MSCS-like 2 (TAIR:AT5G10490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1144.0) & (original description: no original description)","protein_coding" "PSME_00000068-RA","No alias","Pseudotsuga menziesii","(at2g26260 : 555.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (3BETAHSD/D2); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (TAIR:AT1G47290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1110.0) & (original description: no original description)","protein_coding" "PSME_00000942-RA","No alias","Pseudotsuga menziesii","(at5g60580 : 219.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)","protein_coding" "PSME_00001887-RA","No alias","Pseudotsuga menziesii","(at5g19420 : 1094.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (reliability: 2188.0) & (original description: no original description)","protein_coding" "PSME_00004227-RA","No alias","Pseudotsuga menziesii","(p23225|gltb_maize : 550.0) Ferredoxin-dependent glutamate synthase, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT) - Zea mays (Maize) & (at5g04140 : 540.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (reliability: 1080.0) & (original description: no original description)","protein_coding" "PSME_00004228-RA","No alias","Pseudotsuga menziesii","(at2g41220 : 410.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.; glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink). & (q43155|gltb_spiol : 407.0) Ferredoxin-dependent glutamate synthase, chloroplast (EC 1.4.7.1) (Fd-GOGAT) - Spinacia oleracea (Spinach) & (reliability: 820.0) & (original description: no original description)","protein_coding" "PSME_00004338-RA","No alias","Pseudotsuga menziesii","(at4g34740 : 712.0) Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage.; GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis; LOCATED IN: plastid stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 (TAIR:AT2G16570.1); Has 21535 Blast hits to 21523 proteins in 2920 species: Archae - 630; Bacteria - 12403; Metazoa - 419; Fungi - 318; Plants - 251; Viruses - 17; Other Eukaryotes - 7497 (source: NCBI BLink). & (p52418|pur1_soybn : 689.0) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (reliability: 1424.0) & (original description: no original description)","protein_coding" "PSME_00006184-RA","No alias","Pseudotsuga menziesii","(p93111|hem11_cucsa : 685.0) Glutamyl-tRNA reductase 1, chloroplast precursor (EC 1.2.1.70) (GluTR) - Cucumis sativus (Cucumber) & (at1g58290 : 668.0) Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.; HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). & (reliability: 1336.0) & (original description: no original description)","protein_coding" "PSME_00006192-RA","No alias","Pseudotsuga menziesii","(at3g56690 : 179.0) encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined.; Cam interacting protein 111 (CIP111); FUNCTIONS IN: ATPase activity, calmodulin binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 63578 Blast hits to 32942 proteins in 3240 species: Archae - 2541; Bacteria - 24762; Metazoa - 9322; Fungi - 6853; Plants - 5967; Viruses - 72; Other Eukaryotes - 14061 (source: NCBI BLink). & (q96372|cdc48_capan : 99.8) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 358.0) & (original description: no original description)","protein_coding" "PSME_00007256-RA","No alias","Pseudotsuga menziesii","(q84tq7|gai_goshi : 509.0) DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI) - Gossypium hirsutum (Upland cotton) & (at2g01570 : 488.0) Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.; REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 976.0) & (original description: no original description)","protein_coding" "PSME_00007742-RA","No alias","Pseudotsuga menziesii","(at5g64940 : 291.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 582.0) & (original description: no original description)","protein_coding" "PSME_00008055-RA","No alias","Pseudotsuga menziesii","(at5g01160 : 124.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)","protein_coding" "PSME_00008087-RA","No alias","Pseudotsuga menziesii","(at5g22800 : 632.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 1030 (EMB1030); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1); Has 15847 Blast hits to 15731 proteins in 3137 species: Archae - 486; Bacteria - 7745; Metazoa - 750; Fungi - 242; Plants - 138; Viruses - 0; Other Eukaryotes - 6486 (source: NCBI BLink). & (reliability: 1264.0) & (original description: no original description)","protein_coding" "PSME_00008602-RA","No alias","Pseudotsuga menziesii","(q43467|eftu1_soybn : 699.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Glycine max (Soybean) & (at4g20360 : 678.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1356.0) & (original description: no original description)","protein_coding" "PSME_00009474-RA","No alias","Pseudotsuga menziesii","(at5g01920 : 299.0) Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.; STN8; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: photosystem II stabilization; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: STN7 (Stt7 homolog STN7); kinase/ protein kinase (TAIR:AT1G68830.1); Has 33057 Blast hits to 33030 proteins in 1682 species: Archae - 26; Bacteria - 4053; Metazoa - 14243; Fungi - 4538; Plants - 3212; Viruses - 96; Other Eukaryotes - 6889 (source: NCBI BLink). & (q84v18|stt7_chlre : 152.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 598.0) & (original description: no original description)","protein_coding" "PSME_00009567-RA","No alias","Pseudotsuga menziesii","(at4g33650 : 355.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (reliability: 710.0) & (original description: no original description)","protein_coding" "PSME_00009602-RA","No alias","Pseudotsuga menziesii","(at1g53800 : 229.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "PSME_00010578-RA","No alias","Pseudotsuga menziesii","(at4g28080 : 1306.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 2612.0) & (original description: no original description)","protein_coding" "PSME_00010907-RA","No alias","Pseudotsuga menziesii","(at1g70070 : 370.0) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (reliability: 740.0) & (original description: no original description)","protein_coding" "PSME_00011683-RA","No alias","Pseudotsuga menziesii","(at4g02260 : 230.0) RELA/SPOT homolog 1 (RSH1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to wounding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)","protein_coding" "PSME_00011688-RA","No alias","Pseudotsuga menziesii","(at3g05545 : 110.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, PHD-type (InterPro:IPR001965); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47700.1); Has 1560 Blast hits to 1269 proteins in 195 species: Archae - 0; Bacteria - 91; Metazoa - 627; Fungi - 277; Plants - 288; Viruses - 4; Other Eukaryotes - 273 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "PSME_00013307-RA","No alias","Pseudotsuga menziesii","(p57997|if2c_phavu : 551.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (at1g17220 : 540.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (reliability: 1080.0) & (original description: no original description)","protein_coding" "PSME_00013348-RA","No alias","Pseudotsuga menziesii","(p26320|psbo_soltu : 438.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Solanum tuberosum (Potato) & (at5g66570 : 411.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type.; PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 822.0) & (original description: no original description)","protein_coding" "PSME_00013415-RA","No alias","Pseudotsuga menziesii","(at2g28800 : 99.0) member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.; ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1). & (q9fy06|ppf1_pea : 87.8) Inner membrane protein PPF-1, chloroplast precursor (Post-floral-specific protein 1) - Pisum sativum (Garden pea) & (reliability: 198.0) & (original description: no original description)","protein_coding" "PSME_00014301-RA","No alias","Pseudotsuga menziesii","(q53ni2|nadk2_orysa : 791.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 786.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 1572.0) & (original description: no original description)","protein_coding" "PSME_00014594-RA","No alias","Pseudotsuga menziesii","(at1g08540 : 330.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 660.0) & (original description: no original description)","protein_coding" "PSME_00014614-RA","No alias","Pseudotsuga menziesii","(p52783|glna_pinsy : 602.0) Glutamine synthetase cytosolic isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS1) - Pinus sylvestris (Scots pine) & (at5g16570 : 524.0) Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthetase 1;4 (GLN1;4); CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1048.0) & (original description: no original description)","protein_coding" "PSME_00015895-RA","No alias","Pseudotsuga menziesii","(at3g19540 : 568.0) Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT1G49840.1); Has 219 Blast hits to 218 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 219; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1136.0) & (original description: no original description)","protein_coding" "PSME_00016710-RA","No alias","Pseudotsuga menziesii","(at1g29340 : 462.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.; plant U-box 17 (PUB17); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: defense response to fungus, incompatible interaction, defense response, incompatible interaction, apoptosis, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G01830.1); Has 4178 Blast hits to 3456 proteins in 244 species: Archae - 2; Bacteria - 18; Metazoa - 476; Fungi - 388; Plants - 2844; Viruses - 3; Other Eukaryotes - 447 (source: NCBI BLink). & (q64ha9|spl11_orysa : 315.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 924.0) & (original description: no original description)","protein_coding" "PSME_00017066-RA","No alias","Pseudotsuga menziesii","(at1g78420 : 222.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17145.1). & (reliability: 444.0) & (original description: no original description)","protein_coding" "PSME_00017468-RA","No alias","Pseudotsuga menziesii","(p37272|psy_capan : 122.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (at5g17230 : 116.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)","protein_coding" "PSME_00018109-RA","No alias","Pseudotsuga menziesii","(at5g26742 : 768.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 351.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1536.0) & (original description: no original description)","protein_coding" "PSME_00018249-RA","No alias","Pseudotsuga menziesii","(o49954|gcsp_soltu : 1622.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Solanum tuberosum (Potato) & (at4g33010 : 1620.0) glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3240.0) & (original description: no original description)","protein_coding" "PSME_00019489-RA","No alias","Pseudotsuga menziesii","(q40884|mapk_pethy : 533.0) Mitogen-activated protein kinase homolog 1 (EC 2.7.11.24) (PMEK1) - Petunia hybrida (Petunia) & (at1g10210 : 522.0) Encodes ATMPK1.; mitogen-activated protein kinase 1 (ATMPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase homolog 2 (TAIR:AT1G59580.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1044.0) & (original description: no original description)","protein_coding" "PSME_00020379-RA","No alias","Pseudotsuga menziesii","(at1g64530 : 513.0) Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035); BEST Arabidopsis thaliana protein match is: NIN like protein 7 (TAIR:AT4G24020.1); Has 703 Blast hits to 646 proteins in 50 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 585; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 1026.0) & (original description: no original description)","protein_coding" "PSME_00021655-RA","No alias","Pseudotsuga menziesii","(at5g14640 : 707.0) shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40518|msk1_tobac : 686.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (reliability: 1414.0) & (original description: no original description)","protein_coding" "PSME_00023284-RA","No alias","Pseudotsuga menziesii","(at1g31930 : 270.0) Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.; extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1). & (reliability: 540.0) & (original description: no original description)","protein_coding" "PSME_00023944-RA","No alias","Pseudotsuga menziesii","(at4g26190 : 122.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)","protein_coding" "PSME_00025688-RA","No alias","Pseudotsuga menziesii","(at4g16110 : 251.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (q689g4|prr73_orysa : 80.5) Two-component response regulator-like PRR73 (Pseudo-response regulator 73) (OsPRR73) - Oryza sativa (Rice) & (reliability: 502.0) & (original description: no original description)","protein_coding" "PSME_00026185-RA","No alias","Pseudotsuga menziesii","(at1g27910 : 490.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.; plant U-box 45 (PUB45); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G24330.1); Has 2726 Blast hits to 2661 proteins in 214 species: Archae - 0; Bacteria - 25; Metazoa - 192; Fungi - 159; Plants - 2120; Viruses - 3; Other Eukaryotes - 227 (source: NCBI BLink). & (q64ha9|spl11_orysa : 124.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 980.0) & (original description: no original description)","protein_coding" "PSME_00026521-RA","No alias","Pseudotsuga menziesii","(at3g19950 : 152.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "PSME_00027250-RA","No alias","Pseudotsuga menziesii","(at5g15450 : 165.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 310.0) & (original description: no original description)","protein_coding" "PSME_00027324-RA","No alias","Pseudotsuga menziesii","(at1g50200 : 336.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (reliability: 672.0) & (original description: no original description)","protein_coding" "PSME_00027400-RA","No alias","Pseudotsuga menziesii","(at2g39940 : 611.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 1222.0) & (original description: no original description)","protein_coding" "PSME_00027835-RA","No alias","Pseudotsuga menziesii","(at2g22300 : 284.0) Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.; signal responsive 1 (SR1); FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: response to biotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains (TAIR:AT5G64220.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 544.0) & (original description: no original description)","protein_coding" "PSME_00028490-RA","No alias","Pseudotsuga menziesii","(at3g18290 : 905.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 1810.0) & (original description: no original description)","protein_coding" "PSME_00029186-RA","No alias","Pseudotsuga menziesii","(at1g06230 : 335.0) This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.; global transcription factor group E4 (GTE4); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA mediated transformation, cell cycle, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT1G17790.1). & (reliability: 670.0) & (original description: no original description)","protein_coding" "PSME_00029827-RA","No alias","Pseudotsuga menziesii","(at1g51720 : 301.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description)","protein_coding" "PSME_00030438-RA","No alias","Pseudotsuga menziesii","(at2g16990 : 191.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)","protein_coding" "PSME_00032790-RA","No alias","Pseudotsuga menziesii","(p28723|fths_spiol : 1022.0) Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS) - Spinacia oleracea (Spinach) & (at1g50480 : 1008.0) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete; 10-formyltetrahydrofolate synthetase (THFS); FUNCTIONS IN: formate-tetrahydrofolate ligase activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, folic acid and derivative biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Formate-tetrahydrofolate ligase, FTHFS, conserved site (InterPro:IPR020628), Formate-tetrahydrofolate ligase, FTHFS (InterPro:IPR000559); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G12280.1); Has 7211 Blast hits to 7172 proteins in 1581 species: Archae - 30; Bacteria - 3794; Metazoa - 307; Fungi - 186; Plants - 64; Viruses - 0; Other Eukaryotes - 2830 (source: NCBI BLink). & (reliability: 2016.0) & (original description: no original description)","protein_coding" "PSME_00033325-RA","No alias","Pseudotsuga menziesii","(at2g31890 : 333.0) Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance.; RAP; CONTAINS InterPro DOMAIN/s: RAP domain (InterPro:IPR013584); Has 766 Blast hits to 576 proteins in 113 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 18; Plants - 194; Viruses - 0; Other Eukaryotes - 390 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description)","protein_coding" "PSME_00033753-RA","No alias","Pseudotsuga menziesii","(at1g31870 : 117.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)","protein_coding" "PSME_00034085-RA","No alias","Pseudotsuga menziesii","(at2g37710 : 501.0) Induced in response to Salicylic acid.; receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 163.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 910.0) & (original description: no original description)","protein_coding" "PSME_00037126-RA","No alias","Pseudotsuga menziesii","(at1g08570 : 214.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) & (original description: no original description)","protein_coding" "PSME_00037336-RA","No alias","Pseudotsuga menziesii","(at5g07740 : 86.3) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (reliability: 172.6) & (original description: no original description)","protein_coding" "PSME_00037441-RA","No alias","Pseudotsuga menziesii","(at2g01850 : 343.0) EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.; endoxyloglucan transferase A3 (EXGT-A3); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: phloem or xylem histogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 28 (TAIR:AT1G14720.1); Has 2101 Blast hits to 2091 proteins in 291 species: Archae - 0; Bacteria - 238; Metazoa - 0; Fungi - 449; Plants - 1341; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q41542|xth_wheat : 192.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 686.0) & (original description: no original description)","protein_coding" "PSME_00037619-RA","No alias","Pseudotsuga menziesii","(at1g16520 : 114.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "PSME_00038053-RA","No alias","Pseudotsuga menziesii","(at5g13630 : 2193.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 4386.0) & (original description: no original description)","protein_coding" "PSME_00039147-RA","No alias","Pseudotsuga menziesii","(p93431|rca_orysa : 723.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (at2g39730 : 706.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 1412.0) & (original description: no original description)","protein_coding" "PSME_00040449-RA","No alias","Pseudotsuga menziesii","(q8s7e1|cao_orysa : 621.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (at1g44446 : 593.0) Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1186.0) & (original description: no original description)","protein_coding" "PSME_00040764-RA","No alias","Pseudotsuga menziesii","(at5g03555 : 632.0) permease, cytosine/purines, uracil, thiamine, allantoin family protein; FUNCTIONS IN: nucleobase transmembrane transporter activity; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Permease, cytosine/purines, uracil, thiamine, allantoin (InterPro:IPR001248); Has 4949 Blast hits to 4943 proteins in 959 species: Archae - 81; Bacteria - 2901; Metazoa - 0; Fungi - 592; Plants - 52; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (reliability: 1264.0) & (original description: no original description)","protein_coding" "PSME_00041316-RA","No alias","Pseudotsuga menziesii","(at5g39660 : 139.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 107.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 278.0) & (original description: no original description)","protein_coding" "PSME_00044379-RA","No alias","Pseudotsuga menziesii","(q43415|lcyb_capan : 736.0) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-) - Capsicum annuum (Bell pepper) & (at3g10230 : 726.0) Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.; lycopene cyclase (LYC); CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase (InterPro:IPR008671), Lycopene cyclase, beta/epsilon (InterPro:IPR010108); BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein (TAIR:AT5G57030.1); Has 1114 Blast hits to 1109 proteins in 188 species: Archae - 1; Bacteria - 220; Metazoa - 0; Fungi - 0; Plants - 356; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (reliability: 1452.0) & (original description: no original description)","protein_coding" "PSME_00044622-RA","No alias","Pseudotsuga menziesii","(at1g30360 : 704.0) early-responsive to dehydration 4 (ERD4); INVOLVED IN: response to water deprivation; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G02900.1); Has 1361 Blast hits to 1266 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 651; Plants - 396; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 1408.0) & (original description: no original description)","protein_coding" "PSME_00050779-RA","No alias","Pseudotsuga menziesii","(at3g22430 : 276.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)","protein_coding" "PSME_00051574-RA","No alias","Pseudotsuga menziesii","(q69r21|aldo4_orysa : 499.0) Probable aldehyde oxidase 4 (EC 1.2.3.1) (AO-4) - Oryza sativa (Rice) & (at3g43600 : 482.0) Encodes an aldehyde oxidase. AAO2 does not appear to act on abscisic aldehyde in vitro but it is possible that it may function in abscisic acid biosynthesis when the activity of At2g27150 (AAO3), the primary abscisic aldehyde oxidase, is lost.; aldehyde oxidase 2 (AAO2); FUNCTIONS IN: aldehyde oxidase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 1 (TAIR:AT5G20960.2); Has 18530 Blast hits to 17817 proteins in 1279 species: Archae - 421; Bacteria - 11000; Metazoa - 1023; Fungi - 117; Plants - 281; Viruses - 0; Other Eukaryotes - 5688 (source: NCBI BLink). & (reliability: 964.0) & (original description: no original description)","protein_coding" "PSME_00052632-RA","No alias","Pseudotsuga menziesii","(at1g76880 : 371.0) Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 4096 Blast hits to 3293 proteins in 319 species: Archae - 0; Bacteria - 232; Metazoa - 1014; Fungi - 378; Plants - 799; Viruses - 55; Other Eukaryotes - 1618 (source: NCBI BLink). & (reliability: 742.0) & (original description: no original description)","protein_coding" "PSME_00054449-RA","No alias","Pseudotsuga menziesii","(at2g40830 : 144.0) Encodes a putative RING-H2 finger protein RHC1a.; RING-H2 finger C1A (RHC1A); FUNCTIONS IN: zinc ion binding; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)","protein_coding" "PSME_00056206-RA","No alias","Pseudotsuga menziesii","(at1g31330 : 247.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (p13192|psaf_horvu : 246.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) - Hordeum vulgare (Barley) & (reliability: 494.0) & (original description: no original description)","protein_coding" "PSME_00056418-RA","No alias","Pseudotsuga menziesii","(at1g02040 : 111.0) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "Seita.1G024300.1","No alias","Setaria italica ","E3 ubiquitin ligase","protein_coding" "Seita.1G057100.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding" "Seita.1G097800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G099200.1","No alias","Setaria italica ","glutaminase component of pyridoxal 5-phosphate synthase complex","protein_coding" "Seita.1G161800.1","No alias","Setaria italica ","E3 ubiquitin ligase","protein_coding" "Seita.1G198600.1","No alias","Setaria italica ","bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.1G216200.1","No alias","Setaria italica ","phosphate transporter *(PHT2)","protein_coding" "Seita.1G340600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G344600.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.1G354800.1","No alias","Setaria italica ","monogalactosyldiacylglycerol synthase & EC_2.4 glycosyltransferase","protein_coding" "Seita.1G365200.1","No alias","Setaria italica ","ABC1 atypical protein kinase","protein_coding" "Seita.1G372300.1","No alias","Setaria italica ","plasma membrane intrinsic protein *(PIP)","protein_coding" "Seita.1G380100.1","No alias","Setaria italica ","small GTPase *(ROP)","protein_coding" "Seita.2G060400.1","No alias","Setaria italica ","MAP3K-WNK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.2G123000.1","No alias","Setaria italica ","plasma membrane intrinsic protein *(PIP)","protein_coding" "Seita.2G126200.1","No alias","Setaria italica ","EC_2.3 acyltransferase","protein_coding" "Seita.2G129800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G133000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G166700.1","No alias","Setaria italica ","component *(LHCq) of LHC-II complex","protein_coding" "Seita.2G238800.1","No alias","Setaria italica ","metabolite transporter *(DTX)","protein_coding" "Seita.2G259500.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding" "Seita.2G303600.1","No alias","Setaria italica ","myosin adaptor protein *(MadB)","protein_coding" "Seita.2G304200.1","No alias","Setaria italica ","phosphate transporter *(PHT4)","protein_coding" "Seita.2G305900.1","No alias","Setaria italica ","NADPH","protein_coding" "Seita.2G327400.1","No alias","Setaria italica ","LON-type protease","protein_coding" "Seita.2G396900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G417100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G031300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G042200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G058000.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & MAP-kinase protein kinase","protein_coding" "Seita.3G108700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G109100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G131700.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.3G131800.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.3G139600.1","No alias","Setaria italica ","regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & component *(SPA) of substrate adaptor module of CUL4-based ubiquitin ligase complex","protein_coding" "Seita.3G182400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G239400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G274200.1","No alias","Setaria italica ","C2H2 subclass Di19 transcription factor","protein_coding" "Seita.3G292200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G294500.1","No alias","Setaria italica ","EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)","protein_coding" "Seita.3G353100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G394900.1","No alias","Setaria italica ","component *(NF-YA) of NF-Y transcription factor complex","protein_coding" "Seita.3G397800.1","No alias","Setaria italica ","phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Seita.4G056000.1","No alias","Setaria italica ","accessory protein *(PlCALM3)","protein_coding" "Seita.4G077400.1","No alias","Setaria italica ","Kinesin-14-type motor protein & accessory motility factor *(KAC)","protein_coding" "Seita.4G102100.1","No alias","Setaria italica ","small GTPase *(ROP)","protein_coding" "Seita.4G185200.1","No alias","Setaria italica ","allantoate amidohydrolase","protein_coding" "Seita.4G205300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G222200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G227100.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding" "Seita.5G045500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G067500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G081500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G142600.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.5G177000.1","No alias","Setaria italica ","component *(DET1) of CDDD substrate adaptor module of CUL4-based ubiquitin ligase","protein_coding" "Seita.5G231500.1","No alias","Setaria italica ","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding" "Seita.5G234700.1","No alias","Setaria italica ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "Seita.5G248800.1","No alias","Setaria italica ","EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "Seita.5G250800.1","No alias","Setaria italica ","E2 MUB ubiquitin-conjugating enzyme","protein_coding" "Seita.5G262300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G284200.1","No alias","Setaria italica ","MAP3K-MEKK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.5G291800.1","No alias","Setaria italica ","glycine dehydrogenase component *(P-protein) of glycine cleavage system & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "Seita.5G380600.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.5G394800.1","No alias","Setaria italica ","metal cation transporter *(MRS/MGT)","protein_coding" "Seita.5G411200.1","No alias","Setaria italica ","substrate adaptor BT of CUL3-BTB E3 ubiquitin ligase complex","protein_coding" "Seita.6G060500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G162900.1","No alias","Setaria italica ","EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor & NADP-dependent glyceraldehyde 3-phosphate dehydrogenase","protein_coding" "Seita.7G111300.1","No alias","Setaria italica ","metal ion-chelate reductase *(FRO)","protein_coding" "Seita.7G200400.1","No alias","Setaria italica ","amino acid transporter *(ANT)","protein_coding" "Seita.7G209700.1","No alias","Setaria italica ","GRAS-type transcription factor","protein_coding" "Seita.7G219300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G235600.1","No alias","Setaria italica ","dienoyl-CoA reductase & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding" "Seita.7G236100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G265500.1","No alias","Setaria italica ","sulfate transporter *(SULTR)","protein_coding" "Seita.7G286500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.8G022200.1","No alias","Setaria italica ","hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase","protein_coding" "Seita.8G028100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.8G035100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.8G037300.1","No alias","Setaria italica ","transcriptional co-regulator *(OFP)","protein_coding" "Seita.8G116700.1","No alias","Setaria italica ","regulatory protein of RNA homeostasis","protein_coding" "Seita.8G148600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.8G216200.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.8G222500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G042400.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.9G044500.1","No alias","Setaria italica ","assembly factor involved in RuBisCo assembly *(RbcX)","protein_coding" "Seita.9G067000.1","No alias","Setaria italica ","acid phosphatase storage protein","protein_coding" "Seita.9G166700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G171300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G190200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G277200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G328700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G337500.1","No alias","Setaria italica ","methylsterol monooxygenase SMO1 of phytosterol C4-demethylation complex & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "Seita.9G359100.1","No alias","Setaria italica ","LON-type protease","protein_coding" "Seita.9G410800.1","No alias","Setaria italica ","sucrose synthase & EC_2.4 glycosyltransferase","protein_coding" "Seita.9G466400.1","No alias","Setaria italica ","aromatic amino acid transporter *(HAAAP)","protein_coding" "Seita.9G514100.1","No alias","Setaria italica ","uroporphyrinogen III synthase *(UROS)","protein_coding" "Seita.9G517500.1","No alias","Setaria italica ","regulatory protein *(CORD) of cortical microtubule organisation","protein_coding" "Seita.9G519900.1","No alias","Setaria italica ","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding" "Seita.9G520400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G532700.1","No alias","Setaria italica ","sulfate transporter *(SULTR)","protein_coding" "Sobic.001G014200.5","No alias","Sorghum bicolor ","RCK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.001G048400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G073500.1","No alias","Sorghum bicolor ","IMP/GMP-specific phosphohydrolase","protein_coding" "Sobic.001G170700.1","No alias","Sorghum bicolor ","protease *(SBT1)","protein_coding" "Sobic.001G351400.1","No alias","Sorghum bicolor ","programmed cell death metacaspase-like regulator *(MCP1)","protein_coding" "Sobic.002G094800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G098800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G324100.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase","protein_coding" "Sobic.002G376600.1","No alias","Sorghum bicolor ","component *(WEB1) of WEB1-PMI2 cp-actin filament reorganisation complex","protein_coding" "Sobic.003G010400.1","No alias","Sorghum bicolor ","G-class RAB GTPase","protein_coding" "Sobic.003G036200.1","No alias","Sorghum bicolor ","cytosolic NADP-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Sobic.003G209600.2","No alias","Sorghum bicolor ","phosphocholine phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding" "Sobic.003G320700.1","No alias","Sorghum bicolor ","component *(ATG18) of autophagosome ATG9-2-18 membrane shuttling complex","protein_coding" "Sobic.004G027800.2","No alias","Sorghum bicolor ","EC_3.2 glycosylase & BZR-type transcription factor","protein_coding" "Sobic.004G046500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G083100.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding" "Sobic.004G096801.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G121400.1","No alias","Sorghum bicolor ","cation antiporter *(CAX)","protein_coding" "Sobic.004G193400.1","No alias","Sorghum bicolor ","component *(PsbTn) of PS-II complex","protein_coding" "Sobic.004G221000.2","No alias","Sorghum bicolor ","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding" "Sobic.004G272100.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group & phosphoribulokinase *(PRK)","protein_coding" "Sobic.005G036400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.005G123200.3","No alias","Sorghum bicolor ","xylulose-1,5-bisphosphate phosphatase *(CbbY)","protein_coding" "Sobic.005G177800.1","No alias","Sorghum bicolor ","transcriptional regulator *(POPEYE) of iron homeostasis & bHLH-type transcription factor","protein_coding" "Sobic.005G179300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.005G213100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G082000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G107832.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G188900.1","No alias","Sorghum bicolor ","GRAS-type transcription factor","protein_coding" "Sobic.007G198300.1","No alias","Sorghum bicolor ","type-II inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding" "Sobic.008G039900.1","No alias","Sorghum bicolor ","glycine dehydrogenase component *(P-protein) of glycine cleavage system & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "Sobic.008G094300.1","No alias","Sorghum bicolor ","sugar efflux transporter *(SWEET)","protein_coding" "Sobic.008G094400.1","No alias","Sorghum bicolor ","sugar efflux transporter *(SWEET)","protein_coding" "Sobic.008G096900.1","No alias","Sorghum bicolor ","regulatory protein *(COV1) of vacuolar protein sorting","protein_coding" "Sobic.008G139000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G140100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G016633.1","No alias","Sorghum bicolor ","MYB class-R2R3 transcription factor","protein_coding" "Sobic.009G085500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G135000.1","No alias","Sorghum bicolor ","regulatory protein *(SPL7) of copper homeostasis & SBP-type transcription factor","protein_coding" "Sobic.009G146800.1","No alias","Sorghum bicolor ","voltage-gated potassium cation channel *(AKT/SKOR/GORK)","protein_coding" "Sobic.009G207900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G237000.1","No alias","Sorghum bicolor ","protease *(Deg)","protein_coding" "Sobic.009G242100.1","No alias","Sorghum bicolor ","motility factor *(CHUP)","protein_coding" "Sobic.010G250900.3","No alias","Sorghum bicolor ","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding" "Solyc01g014120","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc01g014380","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc01g092950","No alias","Solanum lycopersicum","MADS-box transcription factor (AHRD V3.3 *** A0A072TQ92_MEDTR)","protein_coding" "Solyc01g094940","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7KQ62_ARALL)","protein_coding" "Solyc01g097460","No alias","Solanum lycopersicum","Ribose 5-phosphate isomerase-related family protein (AHRD V3.3 *** U5GAQ0_POPTR)","protein_coding" "Solyc01g103200","No alias","Solanum lycopersicum","plasminogen activator inhibitor (AHRD V3.3 *** AT1G57680.3)","protein_coding" "Solyc01g109040","No alias","Solanum lycopersicum","Cytochrome b6-f complex subunit 7 (AHRD V3.3 *** W9R158_9ROSA)","protein_coding" "Solyc01g109260","No alias","Solanum lycopersicum","Plastid division PDV2-like protein (AHRD V3.3 *** A0A0B0MUD2_GOSAR)","protein_coding" "Solyc01g109780","No alias","Solanum lycopersicum","F-box protein (AHRD V3.3 *-* A0A0B2RZB4_GLYSO)","protein_coding" "Solyc01g110350","No alias","Solanum lycopersicum","Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 --* AT3G50420.2)","protein_coding" "Solyc01g111630","No alias","Solanum lycopersicum","D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *-* AT4G34200.1)","protein_coding" "Solyc02g020940","No alias","Solanum lycopersicum","Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** K4B4U4_SOLLC)","protein_coding" "Solyc02g062690","No alias","Solanum lycopersicum","bHLH transcription factor 012","protein_coding" "Solyc02g077780","No alias","Solanum lycopersicum","MACPF domain-containing protein (AHRD V3.3 *** A0A0B2S5Z8_GLYSO)","protein_coding" "Solyc02g080810","No alias","Solanum lycopersicum","Aminomethyltransferase (AHRD V3.3 *** K4B9V1_SOLLC)","protein_coding" "Solyc02g084840","No alias","Solanum lycopersicum","Dhn1 protein (AHRD V3.3 *** O48621_SOLCO)","protein_coding" "Solyc02g086820","No alias","Solanum lycopersicum","chloroplast carbonic anhydrase","protein_coding" "Solyc02g093370","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc03g006030","No alias","Solanum lycopersicum","LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR)","protein_coding" "Solyc03g007030","No alias","Solanum lycopersicum","CDGSH iron-sulfur domain-containing protein","protein_coding" "Solyc03g031700","No alias","Solanum lycopersicum","ATP-binding-cassette transporter family protein (AHRD V3.3 *** B9H1C6_POPTR)","protein_coding" "Solyc03g117850","No alias","Solanum lycopersicum","Ribulose bisphosphate carboxylase/oxygenase activase (AHRD V3.3 *** A0A072VDJ3_MEDTR)","protein_coding" "Solyc03g118130","No alias","Solanum lycopersicum","Rubredoxin (AHRD V3.3 *** A0A0K9Q129_ZOSMR)","protein_coding" "Solyc03g123520","No alias","Solanum lycopersicum","Polyphosphoinositide phosphatase (AHRD V1 ***- C1H752_PARBA)","protein_coding" "Solyc04g015450","No alias","Solanum lycopersicum","extensin X55684","protein_coding" "Solyc04g074350","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** M1D1E1_SOLTU)","protein_coding" "Solyc04g076040","No alias","Solanum lycopersicum","cyclinD5_1","protein_coding" "Solyc04g079110","No alias","Solanum lycopersicum","LOW QUALITY:BRI1 kinase inhibitor 1 (AHRD V3.3 *** A0A061FJ36_THECC)","protein_coding" "Solyc05g008770","No alias","Solanum lycopersicum","Bidirectional amino acid transporter 1 (AHRD V3.3 *-* A0A061E5W5_THECC)","protein_coding" "Solyc05g009930","No alias","Solanum lycopersicum","Hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT3G25690.6)","protein_coding" "Solyc05g010250","No alias","Solanum lycopersicum","N-acetyltransferase, putative (AHRD V3.3 *** B9RLC7_RICCO)","protein_coding" "Solyc05g050110","No alias","Solanum lycopersicum","DUF2358 family protein (DUF2358) (AHRD V3.3 *** AT2G46220.1)","protein_coding" "Solyc05g050240","No alias","Solanum lycopersicum","Plastid division protein PDV1 (AHRD V3.3 *-* A0A199W2F8_ANACO)","protein_coding" "Solyc05g050500","No alias","Solanum lycopersicum","LOW QUALITY:ATP synthase delta chain, putative (AHRD V3.3 *** B9SBC4_RICCO)","protein_coding" "Solyc05g052600","No alias","Solanum lycopersicum","Sedoheptulose-1,7-bisphosphatase (AHRD V3.3 *** G7JAP0_MEDTR)","protein_coding" "Solyc05g055840","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** B6EWY8_LYCBA)","protein_coding" "Solyc05g055850","No alias","Solanum lycopersicum","resistance to phytophthora 1 (AHRD V3.3 *** AT2G48070.2)","protein_coding" "Solyc06g009340","No alias","Solanum lycopersicum","Chaperone protein DnaJ (AHRD V3.3 *-* A0A1D1YHH5_9ARAE)","protein_coding" "Solyc06g053260","No alias","Solanum lycopersicum","SAUR-like auxin-responsive family protein (AHRD V3.3 *** G7J880_MEDTR)","protein_coding" "Solyc06g061070","No alias","Solanum lycopersicum","Glycine cleavage system protein H (AHRD V3.3 *** A9PG07_POPTR)","protein_coding" "Solyc06g065990","No alias","Solanum lycopersicum","ATP synthase subunit b (AHRD V3.3 *** A0A0K9PIX0_ZOSMR)","protein_coding" "Solyc06g068450","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** K4C820_SOLLC)","protein_coding" "Solyc06g072540","No alias","Solanum lycopersicum","ATP synthase subunit alpha, chloroplastic (AHRD V3.3 *-* ATPA_NICTO)","protein_coding" "Solyc06g076790","No alias","Solanum lycopersicum","LOW QUALITY:Thylakoid soluble phosphoprotein (AHRD V3.3 *** Q8GT36_SPIOL)","protein_coding" "Solyc07g042490","No alias","Solanum lycopersicum","LOW QUALITY:Auxin responsive SAUR protein (AHRD V3.3 *** A0A118K7G8_CYNCS)","protein_coding" "Solyc07g054120","No alias","Solanum lycopersicum","LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1)","protein_coding" "Solyc07g054540","No alias","Solanum lycopersicum","Lipoyl synthase (AHRD V3.3 *** W9RNC4_9ROSA)","protein_coding" "Solyc07g054820","No alias","Solanum lycopersicum","Protein THYLAKOID FORMATION1, chloroplastic (AHRD V3.3 *** THF1_SOLTU)","protein_coding" "Solyc07g062740","No alias","Solanum lycopersicum","Serine/arginine repetitive matrix protein 2, putative (AHRD V3.3 *** A0A061F6Z0_THECC)","protein_coding" "Solyc07g066110","No alias","Solanum lycopersicum","LOW QUALITY:Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T0K6_RICCO)","protein_coding" "Solyc07g066610","No alias","Solanum lycopersicum","phosphoglycerate kinase","protein_coding" "Solyc08g065220","No alias","Solanum lycopersicum","glycine decarboxylase p-protein","protein_coding" "Solyc08g074560","No alias","Solanum lycopersicum","ABC1-like kinase 1","protein_coding" "Solyc08g076740","No alias","Solanum lycopersicum","ER-based factor for assembly of V-ATPase (AHRD V3.3 *-* AT5G52980.1)","protein_coding" "Solyc08g076770","No alias","Solanum lycopersicum","ER-based factor for assembly of V-ATPase (AHRD V3.3 *** AT5G52980.1)","protein_coding" "Solyc08g079180","No alias","Solanum lycopersicum","Elongation factor G, chloroplastic (AHRD V3.3 *** K4CNS6_SOLLC)","protein_coding" "Solyc08g083360","No alias","Solanum lycopersicum","Photosynthetic NDH subcomplex B 3 (AHRD V3.3 *** A0A0F7GXX2_9ROSI)","protein_coding" "Solyc09g007240","No alias","Solanum lycopersicum","2,3-bisphosphoglycerate-independent phosphoglycerate mutase (AHRD V3.3 *** AT3G53470.1)","protein_coding" "Solyc09g059510","No alias","Solanum lycopersicum","Ethylene-responsive transcription factor-like protein (AHRD V3.3 *** W9RYM6_9ROSA)","protein_coding" "Solyc09g065180","No alias","Solanum lycopersicum","binding protein precursor AF106660","protein_coding" "Solyc09g074450","No alias","Solanum lycopersicum","LOW QUALITY:Hydroxyproline-rich glycoprotein (AHRD V3.3 *** B9I9X0_POPTR)","protein_coding" "Solyc09g097900","No alias","Solanum lycopersicum","Ras family (AHRD V3.3 *** A0A191UMR0_SOLDE)","protein_coding" "Solyc10g006330","No alias","Solanum lycopersicum","Plastid movement impaired protein (AHRD V3.3 *** G7LD87_MEDTR)","protein_coding" "Solyc10g007100","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *** K4CXP0_SOLLC)","protein_coding" "Solyc10g007670","No alias","Solanum lycopersicum","NifU-like protein 3, chloroplastic (AHRD V3.3 *** A0A1D1XGL9_9ARAE)","protein_coding" "Solyc10g024360","No alias","Solanum lycopersicum","Potassium channel (AHRD V3.3 *** Q9SSV3_NICPA)","protein_coding" "Solyc10g051340","No alias","Solanum lycopersicum","Adenylyl cyclase-associated protein (AHRD V3.3 *** K4D0T6_SOLLC)","protein_coding" "Solyc10g079480","No alias","Solanum lycopersicum","Lycopene beta-cyclase (AHRD V3.3 *** A0A0U2DBC9_LYCCN)","protein_coding" "Solyc10g086730","No alias","Solanum lycopersicum","Fructose-1,6-bisphosphatase (AHRD V3.3 *** W9S5L8_9ROSA)","protein_coding" "Solyc11g006040","No alias","Solanum lycopersicum","Receptor protein kinase, putative (AHRD V3.3 *** B9T5F6_RICCO)","protein_coding" "Solyc11g007670","No alias","Solanum lycopersicum","Myotubularin-related protein 2 (AHRD V3.3 *** A0A0B2NUW1_GLYSO)","protein_coding" "Solyc11g008620","No alias","Solanum lycopersicum","Phosphoglycolate phosphatase (AHRD V3.3 *** A0A0V0I1W8_SOLCH)","protein_coding" "Solyc11g065740","No alias","Solanum lycopersicum","Chaperonin-like RbcX protein (AHRD V3.3 *** G7J266_MEDTR)","protein_coding" "Solyc12g094640","No alias","Solanum lycopersicum","Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 *** K4DH36_SOLLC)","protein_coding" "Solyc12g099930","No alias","Solanum lycopersicum","alanine:glyoxylate aminotransferase (AHRD V3.3 *** AT2G13360.3)","protein_coding" "Sopen08g018830","No alias","Solanum pennellii","Glycine cleavage system P-protein","protein_coding"