"sequence_id","alias","species","description","type"
"105868","No alias","Selaginella moellendorffii ","phragmoplast orienting kinesin 1","protein_coding"
"107333","No alias","Selaginella moellendorffii ","cruciferin 3","protein_coding"
"112001","No alias","Selaginella moellendorffii ","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"167575","No alias","Selaginella moellendorffii ","Proteasome component (PCI) domain protein","protein_coding"
"228572","No alias","Selaginella moellendorffii ","allene oxide synthase","protein_coding"
"235078","No alias","Selaginella moellendorffii ","Mediator complex, subunit Med10","protein_coding"
"269010","No alias","Selaginella moellendorffii ","Auxin efflux carrier family protein","protein_coding"
"271334","No alias","Selaginella moellendorffii ","allene oxide synthase","protein_coding"
"272088","No alias","Selaginella moellendorffii ","20S proteasome subunit PAA2","protein_coding"
"27243","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"27447","No alias","Selaginella moellendorffii ","receptor-like kinase in in flowers 3","protein_coding"
"28630","No alias","Selaginella moellendorffii ","squamosa promoter binding protein-like 8","protein_coding"
"34417","No alias","Selaginella moellendorffii ","Glycosyl hydrolase superfamily protein","protein_coding"
"38995","No alias","Selaginella moellendorffii ","homeobox protein 33","protein_coding"
"402882","No alias","Selaginella moellendorffii ","Putative lysine decarboxylase family protein","protein_coding"
"403713","No alias","Selaginella moellendorffii ","MALE GAMETOPHYTE DEFECTIVE 2","protein_coding"
"404193","No alias","Selaginella moellendorffii ","PRP38 family protein","protein_coding"
"404572","No alias","Selaginella moellendorffii ","auxin transport protein (BIG)","protein_coding"
"410588","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412728","No alias","Selaginella moellendorffii ","Fasciclin-like arabinogalactan family protein","protein_coding"
"412922","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"413468","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414169","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414732","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416916","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"417220","No alias","Selaginella moellendorffii ","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding"
"418921","No alias","Selaginella moellendorffii ","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"420311","No alias","Selaginella moellendorffii ","GRF1-interacting factor 3","protein_coding"
"422116","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"424895","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426245","No alias","Selaginella moellendorffii ","tRNA synthetase class I (I, L, M and V) family protein","protein_coding"
"430656","No alias","Selaginella moellendorffii ","phosphoesterase","protein_coding"
"432187","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"432317","No alias","Selaginella moellendorffii ","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"439474","No alias","Selaginella moellendorffii ","PLAC8 family protein","protein_coding"
"444766","No alias","Selaginella moellendorffii ","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"446021","No alias","Selaginella moellendorffii ","allene oxide synthase","protein_coding"
"72615","No alias","Selaginella moellendorffii ","RING/U-box superfamily protein","protein_coding"
"73490","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"7952","No alias","Selaginella moellendorffii ","ortholog of human splicing factor SC35","protein_coding"
"82306","No alias","Selaginella moellendorffii ","COP1-interacting protein-related","protein_coding"
"85495","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"86151","No alias","Selaginella moellendorffii ","VIRB2-interacting protein 2","protein_coding"
"88136","No alias","Selaginella moellendorffii ","peroxin 19-2","protein_coding"
"91996","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 19","protein_coding"
"93022","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"94807","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"A4A49_16014","No alias","Nicotiana attenuata","ubiquinone biosynthesis protein coq4-like, mitochondrial","protein_coding"
"AC190628.4_FG007","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"At1g02850","No alias","Arabidopsis thaliana","Beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:B3H5Q1]","protein_coding"
"At1g15800","No alias","Arabidopsis thaliana","At1g15800 [Source:UniProtKB/TrEMBL;Acc:Q6NL17]","protein_coding"
"At1g17300","No alias","Arabidopsis thaliana","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17285.1); Has 27 Blast hits to 27 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: /.../BLink). [Source:TAIR;Acc:AT1G17300]","protein_coding"
"At1g55330","No alias","Arabidopsis thaliana","ATAGP21 [Source:UniProtKB/TrEMBL;Acc:A0A178W6X6]","protein_coding"
"At1g65180","No alias","Arabidopsis thaliana","Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9S9J8]","protein_coding"
"At1g66090","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS class) [Source:UniProtKB/TrEMBL;Acc:Q9C515]","protein_coding"
"At1g67080","No alias","Arabidopsis thaliana","Protein ABA DEFICIENT 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP9]","protein_coding"
"At1g68290","No alias","Arabidopsis thaliana","Endonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G4]","protein_coding"
"At1g68330","No alias","Arabidopsis thaliana","At1g68330 [Source:UniProtKB/TrEMBL;Acc:Q8RWC8]","protein_coding"
"At2g03690","No alias","Arabidopsis thaliana","Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR0]","protein_coding"
"At2g29110","No alias","Arabidopsis thaliana","Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]","protein_coding"
"At2g30410","No alias","Arabidopsis thaliana","Tubulin-folding cofactor A [Source:UniProtKB/Swiss-Prot;Acc:O04350]","protein_coding"
"At2g43450","No alias","Arabidopsis thaliana","Uncharacterized protein At2g43450 [Source:UniProtKB/TrEMBL;Acc:O22859]","protein_coding"
"At2g44745","No alias","Arabidopsis thaliana","At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]","protein_coding"
"At2g46390","No alias","Arabidopsis thaliana","Succinate dehydrogenase subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKE0]","protein_coding"
"At2g47690","No alias","Arabidopsis thaliana","NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A [Source:UniProtKB/Swiss-Prot;Acc:O82238]","protein_coding"
"At3g04640","No alias","Arabidopsis thaliana","At3g04640 [Source:UniProtKB/TrEMBL;Acc:Q9SR10]","protein_coding"
"At3g09500","No alias","Arabidopsis thaliana","60S ribosomal protein L35-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF53]","protein_coding"
"At3g10860","No alias","Arabidopsis thaliana","At3g10860 [Source:UniProtKB/TrEMBL;Acc:Q9SG91]","protein_coding"
"At3g12730","No alias","Arabidopsis thaliana","Myb family transcription factor PHL12 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI2]","protein_coding"
"At3g20210","No alias","Arabidopsis thaliana","DELTAVPE [Source:UniProtKB/TrEMBL;Acc:A0A178VB13]","protein_coding"
"At3g28630","No alias","Arabidopsis thaliana","Actin cross-linking protein, putative (DUF569) [Source:UniProtKB/TrEMBL;Acc:Q8GXC9]","protein_coding"
"At3g29300","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LHJ4]","protein_coding"
"At3g29380","No alias","Arabidopsis thaliana","Plant-specific TFIIB-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA6]","protein_coding"
"At3g44280","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase G [Source:UniProtKB/TrEMBL;Acc:Q9LXM0]","protein_coding"
"At3g51040","No alias","Arabidopsis thaliana","Protein RTE1-HOMOLOG [Source:UniProtKB/Swiss-Prot;Acc:Q9SD42]","protein_coding"
"At3g57080","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase V subunit 5A [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J2]","protein_coding"
"At4g01420","No alias","Arabidopsis thaliana","Calcineurin B-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q7FZF1]","protein_coding"
"At4g14615","No alias","Arabidopsis thaliana","At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]","protein_coding"
"At4g14870","No alias","Arabidopsis thaliana","SECE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ24]","protein_coding"
"At4g17510","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE1]","protein_coding"
"At4g24530","No alias","Arabidopsis thaliana","O-fucosyltransferase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y030]","protein_coding"
"At4g29530","No alias","Arabidopsis thaliana","Thiamine phosphate phosphatase-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SU92]","protein_coding"
"At4g29735","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised p /.../ family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G29735]","protein_coding"
"At5g04470","No alias","Arabidopsis thaliana","Cyclin-dependent protein kinase inhibitor SIM [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ78]","protein_coding"
"At5g22600","No alias","Arabidopsis thaliana","FBD / Leucine Rich Repeat domains containing protein [Source:UniProtKB/TrEMBL;Acc:Q1PDU4]","protein_coding"
"At5g24090","No alias","Arabidopsis thaliana","Acidic endochitinase [Source:UniProtKB/Swiss-Prot;Acc:P19172]","protein_coding"
"At5g24140","No alias","Arabidopsis thaliana","squalene monooxygenase 2 [Source:TAIR;Acc:AT5G24140]","protein_coding"
"At5g35900","No alias","Arabidopsis thaliana","LBD35 [Source:UniProtKB/TrEMBL;Acc:A0A178UHA2]","protein_coding"
"At5g45010","No alias","Arabidopsis thaliana","DSS1(V) [Source:UniProtKB/TrEMBL;Acc:Q2PDG4]","protein_coding"
"At5g46140","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q5XV21]","protein_coding"
"At5g47280","No alias","Arabidopsis thaliana","Putative disease resistance protein At5g47280 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVT1]","protein_coding"
"At5g52210","No alias","Arabidopsis thaliana","At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]","protein_coding"
"At5g53950","No alias","Arabidopsis thaliana","Protein CUP-SHAPED COTYLEDON 2 [Source:UniProtKB/Swiss-Prot;Acc:O04017]","protein_coding"
"At5g60530","No alias","Arabidopsis thaliana","At5g60530/muf9_180 [Source:UniProtKB/TrEMBL;Acc:Q9FKJ4]","protein_coding"
"Bradi1g03910","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi1g16180","No alias","Brachypodium distachyon","EID1-like 2","protein_coding"
"Bradi1g22556","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g26080","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g26840","No alias","Brachypodium distachyon","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"Bradi1g28700","No alias","Brachypodium distachyon","ORMDL family protein","protein_coding"
"Bradi1g28870","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Bradi1g35920","No alias","Brachypodium distachyon","KH domain-containing protein / zinc finger (CCCH type) family protein","protein_coding"
"Bradi1g37480","No alias","Brachypodium distachyon","GATA type zinc finger transcription factor family protein","protein_coding"
"Bradi1g53320","No alias","Brachypodium distachyon","Peptidase M20/M25/M40 family protein","protein_coding"
"Bradi1g54190","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding"
"Bradi1g57900","No alias","Brachypodium distachyon","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Bradi1g66980","No alias","Brachypodium distachyon","DA1-related protein 2","protein_coding"
"Bradi2g11250","No alias","Brachypodium distachyon","S-adenosylmethionine synthetase 1","protein_coding"
"Bradi2g24930","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g35492","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g37380","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g43750","No alias","Brachypodium distachyon","Pectin lyase-like superfamily protein","protein_coding"
"Bradi2g52430","No alias","Brachypodium distachyon","HOPZ-ACTIVATED RESISTANCE 1","protein_coding"
"Bradi2g54711","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g59220","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g00158","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g30200","No alias","Brachypodium distachyon","GATA type zinc finger transcription factor family protein","protein_coding"
"Bradi3g38500","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g42430","No alias","Brachypodium distachyon","myb domain protein 42","protein_coding"
"Bradi3g47680","No alias","Brachypodium distachyon","isocitrate dehydrogenase 1","protein_coding"
"Bradi3g55590","No alias","Brachypodium distachyon","Zim17-type zinc finger protein","protein_coding"
"Bradi4g01230","No alias","Brachypodium distachyon","Protein of unknown function (DUF1637)","protein_coding"
"Bradi4g01300","No alias","Brachypodium distachyon","Plant-specific transcription factor YABBY family protein","protein_coding"
"Bradi4g45430","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g08620","No alias","Brachypodium distachyon","serine carboxypeptidase-like 45","protein_coding"
"Bradi5g25920","No alias","Brachypodium distachyon","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Bradi5g26550","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Brara.A00004.1","No alias","Brassica rapa","alpha-class expansin","protein_coding"
"Brara.A00087.1","No alias","Brassica rapa","A-class RAB GTPase","protein_coding"
"Brara.A00225.1","No alias","Brassica rapa","clathrin uncoating protein *(AUL)","protein_coding"
"Brara.A00402.1","No alias","Brassica rapa","light-responsive regulatory protein *(SEP1)","protein_coding"
"Brara.A00719.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00773.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01522.1","No alias","Brassica rapa","GeBP-type transcription factor","protein_coding"
"Brara.A01730.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01958.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02319.1","No alias","Brassica rapa","assembly factor involved in RuBisCo assembly *(BSD2)","protein_coding"
"Brara.A02869.1","No alias","Brassica rapa","spindle assembly checkpoint protein *(BUB3)","protein_coding"
"Brara.B00079.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00212.1","No alias","Brassica rapa","MyoB class-IIb myosin receptor","protein_coding"
"Brara.B00281.1","No alias","Brassica rapa","circadian clock repression factor *(CHE) & TCP-type transcription factor","protein_coding"
"Brara.B00360.1","No alias","Brassica rapa","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Brara.B00389.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01317.1","No alias","Brassica rapa","MAP3K-WNK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B01918.1","No alias","Brassica rapa","regulatory protein *(LOTR) involved in Casparian strip formation","protein_coding"
"Brara.B02257.1","No alias","Brassica rapa","component *(NDUFB2/AGGG) of NADH dehydrogenase beta subcomplex","protein_coding"
"Brara.B03163.1","No alias","Brassica rapa","accessory protein *(COQ4)","protein_coding"
"Brara.B03423.1","No alias","Brassica rapa","substrate adaptor of SCF E3 ubiquitin ligase *(SLY)","protein_coding"
"Brara.B03714.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03833.1","No alias","Brassica rapa","small GTPase *(ROP)","protein_coding"
"Brara.C00624.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)","protein_coding"
"Brara.C00833.1","No alias","Brassica rapa","regulatory component *(TON2/FASS) of TTP preprophase band formation complex & regulatory component B2 of PP2A phosphatase complexes","protein_coding"
"Brara.C01145.1","No alias","Brassica rapa","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C01167.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding"
"Brara.C01507.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01515.1","No alias","Brassica rapa","auxiliary factor of DNA methylation pathway *(MORC)","protein_coding"
"Brara.C02038.1","No alias","Brassica rapa","LIM-type transcription factor","protein_coding"
"Brara.C02629.1","No alias","Brassica rapa","non-SNARE-type phytolongin","protein_coding"
"Brara.C03928.1","No alias","Brassica rapa","transcription factor *(A/B-GATA)","protein_coding"
"Brara.C04638.1","No alias","Brassica rapa","alpha-AURORA kinase activator *(TPXL2/3)","protein_coding"
"Brara.D00404.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding"
"Brara.D01258.1","No alias","Brassica rapa","component *(bTHXm) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.D01522.1","No alias","Brassica rapa","clade I phosphatase","protein_coding"
"Brara.D02199.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02469.1","No alias","Brassica rapa","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Brara.E00543.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01837.1","No alias","Brassica rapa","component *(UPF3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.E01914.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01936.1","No alias","Brassica rapa","nucleotide sugar transporter *(URGT/UXT)","protein_coding"
"Brara.E01957.1","No alias","Brassica rapa","plastidial RNA splicing factor *(CFM3)","protein_coding"
"Brara.E03059.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03642.1","No alias","Brassica rapa","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F01567.1","No alias","Brassica rapa","oxoguanine DNA glycosylase *(OGG1)","protein_coding"
"Brara.F01673.1","No alias","Brassica rapa","AP-endonuclease *(APE1) & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.F02894.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02938.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-7 transcription factor","protein_coding"
"Brara.F03069.1","No alias","Brassica rapa","6-deoxocastasterone 6-oxidase *(BR6OX) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.F03243.1","No alias","Brassica rapa","protein S-acyltransferase *(PAT1-9)","protein_coding"
"Brara.F03361.1","No alias","Brassica rapa","accessory protein *(COQ4)","protein_coding"
"Brara.F03444.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01210.1","No alias","Brassica rapa","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Brara.G01279.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex *(NUP205)","protein_coding"
"Brara.G01505.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01563.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01795.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G01936.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02001.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02718.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03289.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03549.1","No alias","Brassica rapa","uridine 5-carboxymethylaminomethyl modification enzyme *(TrmE)","protein_coding"
"Brara.H00720.1","No alias","Brassica rapa","phospholipase-A1 *(PA-PLA1) & phospholipase *(SGR2)","protein_coding"
"Brara.H01349.1","No alias","Brassica rapa","component *(bL28m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.H01487.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01674.1","No alias","Brassica rapa","regulatory protein (CIB) of blue light perception & bHLH-type transcription factor","protein_coding"
"Brara.H02352.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02357.1","No alias","Brassica rapa","microtubule assembly factor *(TCS1)","protein_coding"
"Brara.H02437.1","No alias","Brassica rapa","homologous recombination repair exonuclease *(EXO1)","protein_coding"
"Brara.H02626.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4B))","protein_coding"
"Brara.H02805.1","No alias","Brassica rapa","STAR-type post-transcriptionally regulatory factor","protein_coding"
"Brara.H03065.1","No alias","Brassica rapa","pre-mRNA-processing protein *(PRP39)","protein_coding"
"Brara.H03092.1","No alias","Brassica rapa","component *(XPD) of multifunctional TFIIh complex & component *(XPD) of TFIIh basal transcription factor complex","protein_coding"
"Brara.I00141.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00931.1","No alias","Brassica rapa","Golgin-type membrane tethering protein *(GRIP)","protein_coding"
"Brara.I01269.1","No alias","Brassica rapa","GDP1 LSU processome maturation factor","protein_coding"
"Brara.I01690.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03414.1","No alias","Brassica rapa","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"Brara.I03680.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03995.1","No alias","Brassica rapa","regulatory protein (CIB) of blue light perception & bHLH-type transcription factor","protein_coding"
"Brara.I04229.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04682.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04699.1","No alias","Brassica rapa","RNA editing factor *(MEF21)","protein_coding"
"Brara.I05529.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05615.1","No alias","Brassica rapa","scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Brara.J00010.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01186.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01584.1","No alias","Brassica rapa","sucrose-phosphate synthase & EC_2.4 glycosyltransferase","protein_coding"
"Brara.J01647.1","No alias","Brassica rapa","ROP-activating protein *(RenGAP)","protein_coding"
"Brara.J02654.1","No alias","Brassica rapa","component *(SAM/Tob55) of outer mitochondrion membrane SAM insertion system","protein_coding"
"Brara.K00186.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01127.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01576.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g009450","No alias","Chlamydomonas reinhardtii","Molecular chaperone Hsp40/DnaJ family protein","protein_coding"
"Cre01.g034700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g048300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g070202","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g081050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g088000","No alias","Chlamydomonas reinhardtii","prohibitin 1","protein_coding"
"Cre02.g096850","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF788)","protein_coding"
"Cre02.g114600","No alias","Chlamydomonas reinhardtii","2-cysteine peroxiredoxin B","protein_coding"
"Cre03.g154850","No alias","Chlamydomonas reinhardtii","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Cre03.g193550","No alias","Chlamydomonas reinhardtii","decoy","protein_coding"
"Cre03.g197850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g204250","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-homocysteine hydrolase","protein_coding"
"Cre03.g206202","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre05.g232800","No alias","Chlamydomonas reinhardtii","sulfiredoxin","protein_coding"
"Cre05.g242950","No alias","Chlamydomonas reinhardtii","Ribosomal protein L22p/L17e family protein","protein_coding"
"Cre06.g250200","No alias","Chlamydomonas reinhardtii","methionine adenosyltransferase 3","protein_coding"
"Cre06.g278222","No alias","Chlamydomonas reinhardtii","receptor for activated C kinase 1C","protein_coding"
"Cre06.g278224","No alias","Chlamydomonas reinhardtii","ribosomal protein L16","protein_coding"
"Cre06.g288400","No alias","Chlamydomonas reinhardtii","ribosomal protein S11","protein_coding"
"Cre06.g293700","No alias","Chlamydomonas reinhardtii","Ribosomal protein L12 family protein","protein_coding"
"Cre06.g298350","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre06.g307950","No alias","Chlamydomonas reinhardtii","Ribosomal protein L9/RNase H1","protein_coding"
"Cre08.g375050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g388550","No alias","Chlamydomonas reinhardtii","Ribosomal protein L21","protein_coding"
"Cre09.g390245","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g392097","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g393358","No alias","Chlamydomonas reinhardtii","Hyaluronan / mRNA binding family","protein_coding"
"Cre09.g394850","No alias","Chlamydomonas reinhardtii","membrane protein, putative","protein_coding"
"Cre09.g397697","No alias","Chlamydomonas reinhardtii","Ribosomal protein L4/L1 family","protein_coding"
"Cre09.g401478","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g428900","No alias","Chlamydomonas reinhardtii","bacterial hemolysin-related","protein_coding"
"Cre10.g430000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g432800","No alias","Chlamydomonas reinhardtii","40s ribosomal protein SA B","protein_coding"
"Cre10.g437500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g480650","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre12.g505950","No alias","Chlamydomonas reinhardtii","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Cre12.g519350","No alias","Chlamydomonas reinhardtii","prohibitin 3","protein_coding"
"Cre12.g555650","No alias","Chlamydomonas reinhardtii","Nucleotide-diphospho-sugar transferase family protein","protein_coding"
"Cre13.g584700","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF185)","protein_coding"
"Cre13.g591501","No alias","Chlamydomonas reinhardtii","Pseudouridine synthase family protein","protein_coding"
"Cre16.g657300","No alias","Chlamydomonas reinhardtii","cyclopropyl isomerase","protein_coding"
"Cre16.g662200","No alias","Chlamydomonas reinhardtii","adenylate cyclases","protein_coding"
"Cre16.g668451","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g683300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g707900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g719150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2009.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2015.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2025.40","No alias","Porphyridium purpureum","(at1g78010 : 187.0) tRNA modification GTPase, putative; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: small GTPase mediated signal transduction, tRNA modification; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), tRNA modification GTPase TrmE (InterPro:IPR004520), GTP-binding protein TrmE, N-terminal (InterPro:IPR018948), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 37224 Blast hits to 31482 proteins in 3092 species: Archae - 387; Bacteria - 27903; Metazoa - 467; Fungi - 287; Plants - 322; Viruses - 0; Other Eukaryotes - 7858 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2032.31","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2033.32","No alias","Porphyridium purpureum","(at5g14460 : 85.5) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2039.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2051.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2052.2","No alias","Porphyridium purpureum","(at1g31360 : 390.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2059.34","No alias","Porphyridium purpureum","(at2g20060 : 100.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2064.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2068.25","No alias","Porphyridium purpureum","(at1g13160 : 220.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro:IPR012977), Armadillo-type fold (InterPro:IPR016024), SDA1 (InterPro:IPR007949); BEST Arabidopsis thaliana protein match is: SDA1 family protein (TAIR:AT4G31520.1); Has 29206 Blast hits to 13573 proteins in 931 species: Archae - 207; Bacteria - 10267; Metazoa - 6952; Fungi - 3668; Plants - 1163; Viruses - 549; Other Eukaryotes - 6400 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2075.6","No alias","Porphyridium purpureum","(at1g01930 : 85.1) zinc finger protein-related; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); Has 1975 Blast hits to 1659 proteins in 367 species: Archae - 3; Bacteria - 303; Metazoa - 582; Fungi - 382; Plants - 105; Viruses - 11; Other Eukaryotes - 589 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2080.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2086.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.2","No alias","Porphyridium purpureum","(at1g60780 : 403.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2090.38","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2116.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2117.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2119.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2139.11","No alias","Porphyridium purpureum","(at3g26570 : 182.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2139.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2150.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2154.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2190.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2219.6","No alias","Porphyridium purpureum","(at1g25380 : 177.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (p29518|bt1_maize : 88.2) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2228.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2273.7","No alias","Porphyridium purpureum","(at5g19300 : 172.0) CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2295.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2307.2","No alias","Porphyridium purpureum","(at3g52390 : 233.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2343.14","No alias","Porphyridium purpureum","(at3g57550 : 155.0) guanylate kinase; guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2359.4","No alias","Porphyridium purpureum","(at5g47680 : 91.7) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2364.1","No alias","Porphyridium purpureum","(at1g20575 : 262.0) Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G39630.1); Has 22705 Blast hits to 22656 proteins in 2589 species: Archae - 933; Bacteria - 16103; Metazoa - 288; Fungi - 260; Plants - 98; Viruses - 23; Other Eukaryotes - 5000 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2502.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2502.18","No alias","Porphyridium purpureum","(at2g22400 : 307.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2621.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2622.5","No alias","Porphyridium purpureum","(at4g25550 : 142.0) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2673.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3387.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3396.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3422.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.26","No alias","Porphyridium purpureum","(at3g50860 : 127.0) Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G19790.1); Has 2004 Blast hits to 2002 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 430; Plants - 303; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (o50016|ap2s1_maize : 99.8) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3441.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3448.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3468.5","No alias","Porphyridium purpureum","(at1g72340 : 220.0) NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: GTP binding, translation initiation factor activity; INVOLVED IN: translational initiation, cellular metabolic process; LOCATED IN: eukaryotic translation initiation factor 2B complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor 2B related (InterPro:IPR000649); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 2B (eIF-2B) family protein (TAIR:AT1G53900.1); Has 4473 Blast hits to 4473 proteins in 1031 species: Archae - 373; Bacteria - 1735; Metazoa - 520; Fungi - 473; Plants - 219; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3478.13","No alias","Porphyridium purpureum","(at5g06550 : 329.0) CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins in 292 species: Archae - 0; Bacteria - 297; Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3490.18","No alias","Porphyridium purpureum","(at1g27530 : 202.0) CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3491.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3522.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3523.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3525.3","No alias","Porphyridium purpureum","(at5g40660 : 112.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3527.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3581.1","No alias","Porphyridium purpureum","(at4g21710 : 1212.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (q9mus5|rpob_mesvi : 137.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (reliability: 2424.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3624.6","No alias","Porphyridium purpureum","(at4g05440 : 95.1) embryo sac development arrest 35 (EDA35); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: polar nucleus fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D123 (InterPro:IPR009772); Has 352 Blast hits to 345 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 149; Plants - 53; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_3649.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3649.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3670.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4402.7","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 129.0) no description available & (at3g56570 : 128.0) SET domain-containing protein; CONTAINS InterPro DOMAIN/s: RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G14030.1); Has 25210 Blast hits to 12491 proteins in 636 species: Archae - 52; Bacteria - 1284; Metazoa - 10981; Fungi - 2786; Plants - 1267; Viruses - 743; Other Eukaryotes - 8097 (source: NCBI BLink). & (gnl|cdd|39774 : 82.1) no description available & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4406.10","No alias","Porphyridium purpureum","(at3g57660 : 696.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (gnl|cdd|68872 : 103.0) no description available & (p06273|rpoc1_marpo : 88.6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Marchantia polymorpha (Liverwort) & (reliability: 1392.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4415.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4429.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4438.15","No alias","Porphyridium purpureum","(at5g45190 : 94.7) Encodes a cyclin T partner CYCT1;5.  Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.16","No alias","Porphyridium purpureum","(at1g64600 : 99.0) methyltransferases;copper ion binding; FUNCTIONS IN: methyltransferase activity, copper ion binding; INVOLVED IN: translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein Rsm22, bacterial-type (InterPro:IPR015324), Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 735 Blast hits to 687 proteins in 272 species: Archae - 0; Bacteria - 212; Metazoa - 195; Fungi - 160; Plants - 44; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.25","No alias","Porphyridium purpureum","(p37384|dmc1_lillo : 322.0) Meiotic recombination protein DMC1 homolog - Lilium longiflorum (Trumpet lily) & (at3g22880 : 319.0) Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.; DISRUPTION OF MEIOTIC CONTROL 1 (DMC1); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, meiosis, chiasma assembly, reciprocal meiotic recombination, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), ATPase, AAA+ type, core (InterPro:IPR003593), Meiotic recombinase Dmc1 (InterPro:IPR011940), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51 (TAIR:AT5G20850.1); Has 11998 Blast hits to 11924 proteins in 3797 species: Archae - 689; Bacteria - 8026; Metazoa - 742; Fungi - 447; Plants - 503; Viruses - 22; Other Eukaryotes - 1569 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4456.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4462.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4476.18","No alias","Porphyridium purpureum","(at4g24190 : 413.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat.  Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36183|enpl_horvu : 403.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (reliability: 826.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.24","No alias","Porphyridium purpureum","(at1g10840 : 206.0) Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).; translation initiation factor 3 subunit H1 (TIF3H1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4506.4","No alias","Porphyridium purpureum","(at4g24040 : 240.0) Encodes a trehalase, member of Glycoside Hydrolase Family 37.; trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_457.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_460.3","No alias","Porphyridium purpureum","(at1g17690 : 218.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_464.11","No alias","Porphyridium purpureum","(at4g10790 : 110.0) UBX domain-containing protein; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_472.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_508.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_512.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_548.3","No alias","Porphyridium purpureum","(at2g01350 : 110.0) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.; quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_560.12","No alias","Porphyridium purpureum","(at1g10580 : 333.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G54520.1); Has 62674 Blast hits to 30927 proteins in 942 species: Archae - 75; Bacteria - 8018; Metazoa - 23835; Fungi - 13551; Plants - 7464; Viruses - 27; Other Eukaryotes - 9704 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_593.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_600.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_611.3","No alias","Porphyridium purpureum","(at1g15730 : 149.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 17 (TAIR:AT1G80480.1); Has 16369 Blast hits to 11834 proteins in 1861 species: Archae - 128; Bacteria - 8189; Metazoa - 1729; Fungi - 553; Plants - 409; Viruses - 6; Other Eukaryotes - 5355 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_626.2","No alias","Porphyridium purpureum","(at1g08190 : 125.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_693.10","No alias","Porphyridium purpureum","(at2g03690 : 169.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_703.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_724.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_724.6","No alias","Porphyridium purpureum","(at2g45730 : 131.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_776.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_790.1","No alias","Porphyridium purpureum","(at3g06810 : 352.0) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render   plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA  (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a  β-oxidation-like process of IBA metabolism in Arabidopsis.  Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting  sequence and  two other putative IBA metabolic enzymes (IBR1 and IBR10)  can be found in this organelle. No specific enzymatic activity has been  documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty  acid β-oxidation.; IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_858.1","No alias","Porphyridium purpureum","(at4g11130 : 176.0) Encodes RNA-dependent RNA polymerase that is required for endogenous siRNA (but not miRNA) formation. Nomenclature according to Xie, et al. (2004).; RNA-dependent RNA polymerase 2 (RDR2); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.140","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.81","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.116","No alias","Cyanophora paradoxa","(at5g10720 : 81.6) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.17","No alias","Cyanophora paradoxa","(o24296|gpx1_pea : 130.0) Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx) - Pisum sativum (Garden pea) & (at4g31870 : 125.0) Encodes glutathione peroxidase.; glutathione peroxidase 7 (GPX7); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 1 (TAIR:AT2G25080.1); Has 8041 Blast hits to 8040 proteins in 1748 species: Archae - 4; Bacteria - 4124; Metazoa - 797; Fungi - 210; Plants - 405; Viruses - 8; Other Eukaryotes - 2493 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.105","No alias","Cyanophora paradoxa","(at5g63010 : 181.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G32950.1); Has 4234 Blast hits to 3983 proteins in 322 species: Archae - 2; Bacteria - 280; Metazoa - 1738; Fungi - 841; Plants - 754; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000215.56","No alias","Cyanophora paradoxa","(at2g27680 : 288.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.67","No alias","Cyanophora paradoxa","(at4g11260 : 193.0) Functions in plant disease resistance signaling,  SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly  expressed than AtSGT1. The N-terminal TPR domain of  AtSGT1a reduces the steady-state level of Arabidopsis SGT1  proteins whereas the same domain from AtSGT1b enhances  SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.; SGT1B; FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Tetratricopeptide-like helical (InterPro:IPR011990), SGS (InterPro:IPR007699), Tetratricopeptide repeat-containing (InterPro:IPR013026), HSP20-like chaperone (InterPro:IPR008978), Tetratricopeptide repeat (InterPro:IPR019734), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.78","No alias","Cyanophora paradoxa","(p27456|gshrp_pea : 210.0) Glutathione reductase, chloroplast/mitochondrial precursor (EC 1.8.1.7) (GR) (GRase) (GOR1) - Pisum sativum (Garden pea) & (at3g54660 : 209.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000350.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000388.51","No alias","Cyanophora paradoxa","(at5g64370 : 237.0) PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.; beta-ureidopropionase (BETA-UP); FUNCTIONS IN: beta-ureidopropionase activity; INVOLVED IN: nitrogen compound metabolic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010); BEST Arabidopsis thaliana protein match is: nitrilase-like protein 1 (TAIR:AT2G27450.2); Has 6588 Blast hits to 6556 proteins in 1697 species: Archae - 146; Bacteria - 4263; Metazoa - 430; Fungi - 262; Plants - 305; Viruses - 11; Other Eukaryotes - 1171 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000403.65","No alias","Cyanophora paradoxa","(at2g03690 : 138.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000403.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000411.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000478.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.4","No alias","Cyanophora paradoxa","(at3g02090 : 367.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (p29677|mppa_soltu : 147.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000553.6","No alias","Cyanophora paradoxa","(at3g15352 : 80.1) Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.; cytochrome c oxidase 17 (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: response to bacterium, response to copper ion; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: Cytochrome C oxidase copper chaperone (COX17) (TAIR:AT1G53030.1); Has 294 Blast hits to 294 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 51; Plants - 55; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000640.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000670.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000786.5","No alias","Cyanophora paradoxa","(at5g42150 : 244.0) Glutathione S-transferase family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutaredoxin active site (InterPro:IPR011767), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.24","No alias","Cyanophora paradoxa","(at4g31530 : 87.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37660.1). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000889.23","No alias","Cyanophora paradoxa","(at5g54100 : 310.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT4G27585.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000940.3","No alias","Cyanophora paradoxa","(p49727|ucri_maize : 205.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) - Zea mays (Maize) & (at5g13440 : 201.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000949.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000949.8","No alias","Cyanophora paradoxa","(at1g02475 : 101.0) Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01883.1); Has 515 Blast hits to 515 proteins in 169 species: Archae - 0; Bacteria - 342; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001085.20","No alias","Cyanophora paradoxa","(at3g19170 : 238.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001085.21","No alias","Cyanophora paradoxa","(at3g19170 : 158.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.27","No alias","Cyanophora paradoxa","(at5g36700 : 269.0) 2-phosphoglycolate phosphatase 1 (PGLP1); FUNCTIONS IN: phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA (InterPro:IPR006357), 2-phosphoglycolate phosphatase, eukaryotic (InterPro:IPR006349); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G36790.3). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001215.19","No alias","Cyanophora paradoxa","(at1g33290 : 217.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 745 Blast hits to 453 proteins in 163 species: Archae - 0; Bacteria - 369; Metazoa - 12; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001416.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001424.8","No alias","Cyanophora paradoxa","(at5g19750 : 97.1) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001527.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.289","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.74","No alias","Cyanophora paradoxa","(at3g05625 : 120.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 330 Blast hits to 328 proteins in 146 species: Archae - 14; Bacteria - 241; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.63","No alias","Cyanophora paradoxa","(at3g03890 : 117.0) FMN binding; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2470 (InterPro:IPR019595), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002), Haem iron utilisation protein, pyridoxamine 5'-phosphate domain-containing (InterPro:IPR014599); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 770 Blast hits to 770 proteins in 270 species: Archae - 0; Bacteria - 458; Metazoa - 13; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020801.74","No alias","Cyanophora paradoxa","(at3g08950 : 181.0) Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain.  HCC1 is localized in the mitochondrion.  A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity.  Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.; electron transport SCO1/SenC family protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synthesis of cytochrome c oxidase, Sco1/Sco2 (InterPro:IPR017276), Copper chaperone SCO1/SenC (InterPro:IPR003782), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G39740.1); Has 4072 Blast hits to 4072 proteins in 1098 species: Archae - 11; Bacteria - 2439; Metazoa - 165; Fungi - 147; Plants - 84; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020816.89","No alias","Cyanophora paradoxa","(at1g08540 : 224.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.34","No alias","Cyanophora paradoxa","(at3g11630 : 155.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.; Thioredoxin superfamily protein; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 16794 Blast hits to 16794 proteins in 2739 species: Archae - 621; Bacteria - 10920; Metazoa - 1157; Fungi - 359; Plants - 398; Viruses - 0; Other Eukaryotes - 3339 (source: NCBI BLink). & (o24364|bas1_spiol : 151.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) - Spinacia oleracea (Spinach) & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020902.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.113","No alias","Cyanophora paradoxa","(at1g60500 : 220.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.150","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.11","No alias","Cyanophora paradoxa","(at5g02240 : 132.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: apoplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020912.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020930.6","No alias","Cyanophora paradoxa","(at1g73990 : 153.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020944.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020960.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.127","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.136","No alias","Cyanophora paradoxa","(at5g20140 : 117.0) SOUL heme-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790), SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT3G10130.1). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.57","No alias","Cyanophora paradoxa","(at2g44920 : 98.6) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021098.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.12","No alias","Cyanophora paradoxa","(at4g01940 : 105.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.; NFU domain protein 1 (NFU1); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NIFU-like protein 2 (TAIR:AT5G49940.1); Has 4565 Blast hits to 4561 proteins in 1155 species: Archae - 11; Bacteria - 2225; Metazoa - 159; Fungi - 160; Plants - 186; Viruses - 3; Other Eukaryotes - 1821 (source: NCBI BLink). & (q84lk7|nifu1_orysa : 92.4) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021133.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.14","No alias","Cyanophora paradoxa","(at1g09340 : 348.0) Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein.  CRB is important for the proper functioning of the chloroplast.  Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.; chloroplast RNA binding (CRB); FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast stem-loop binding protein of  41 kDa (TAIR:AT3G63140.1); Has 5936 Blast hits to 5936 proteins in 1402 species: Archae - 366; Bacteria - 3891; Metazoa - 108; Fungi - 58; Plants - 234; Viruses - 3; Other Eukaryotes - 1276 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.51","No alias","Cyanophora paradoxa","(at2g34460 : 166.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021494.8","No alias","Cyanophora paradoxa","(at1g04420 : 258.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (q40648|kcab_orysa : 100.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021501.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021517.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021525.26","No alias","Cyanophora paradoxa","(q6k669|ampl2_orysa : 139.0) Leucine aminopeptidase 2, chloroplast precursor (EC 3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase 2) - Oryza sativa (Rice) & (at2g24200 : 136.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30920.1). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021531.6","No alias","Cyanophora paradoxa","(at4g13250 : 166.0) Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NON-YELLOW COLORING 1 (NYC1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NYC1-like (TAIR:AT5G04900.1). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021589.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.40","No alias","Cyanophora paradoxa","(at5g54310 : 154.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.  Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"Glyma.01G024100","No alias","Glycine max","TTF-type zinc finger protein with HAT dimerisation domain","protein_coding"
"Glyma.01G116000","No alias","Glycine max","high mobility group B1","protein_coding"
"Glyma.01G150200","No alias","Glycine max","Amino acid permease family protein","protein_coding"
"Glyma.01G182000","No alias","Glycine max","extra-large G-protein 1","protein_coding"
"Glyma.02G114200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.02G119500","No alias","Glycine max","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Glyma.03G207000","No alias","Glycine max","Phosphatidic acid phosphatase (PAP2) family protein","protein_coding"
"Glyma.03G214150","No alias","Glycine max","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"Glyma.03G242100","No alias","Glycine max","Calcium-dependent phospholipid-binding Copine family protein","protein_coding"
"Glyma.04G069500","No alias","Glycine max","HCO3- transporter family","protein_coding"
"Glyma.04G115000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G146200","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding"
"Glyma.04G187900","No alias","Glycine max","C2 calcium/lipid-binding and GRAM domain containing protein","protein_coding"
"Glyma.04G213700","No alias","Glycine max","O-fucosyltransferase family protein","protein_coding"
"Glyma.05G226300","No alias","Glycine max","sulfate transporter 3;1","protein_coding"
"Glyma.06G016800","No alias","Glycine max","WUSCHEL related homeobox 13","protein_coding"
"Glyma.06G104600","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.06G254800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G264300","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.06G266900","No alias","Glycine max","galacturonosyltransferase 12","protein_coding"
"Glyma.06G281800","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding"
"Glyma.06G282700","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding"
"Glyma.07G048800","No alias","Glycine max","O-methyltransferase 1","protein_coding"
"Glyma.07G052632","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G066400","No alias","Glycine max","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Glyma.07G066700","No alias","Glycine max","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Glyma.07G107000","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.07G144000","No alias","Glycine max","receptor like protein 21","protein_coding"
"Glyma.07G193600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G195200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G146800","No alias","Glycine max","RNA polymerase II, Rpb4, core protein","protein_coding"
"Glyma.08G323100","No alias","Glycine max","MBOAT (membrane bound O-acyl transferase) family protein","protein_coding"
"Glyma.09G116500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G183500","No alias","Glycine max","BR enhanced expression 3","protein_coding"
"Glyma.09G219700","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding"
"Glyma.09G241600","No alias","Glycine max","AAA-ATPase 1","protein_coding"
"Glyma.09G269100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G209100","No alias","Glycine max","Cysteine proteinases superfamily protein","protein_coding"
"Glyma.10G251900","No alias","Glycine max","polyubiquitin 10","protein_coding"
"Glyma.10G296100","No alias","Glycine max","inositol transporter 1","protein_coding"
"Glyma.11G040552","No alias","Glycine max","GTP-binding protein Obg/CgtA","protein_coding"
"Glyma.11G089000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G093000","No alias","Glycine max","Proteasome maturation factor UMP1","protein_coding"
"Glyma.11G153501","No alias","Glycine max","annexin 8","protein_coding"
"Glyma.11G157976","No alias","Glycine max","pheophytinase","protein_coding"
"Glyma.11G165700","No alias","Glycine max","Protein of unknown function (DUF640)","protein_coding"
"Glyma.12G068500","No alias","Glycine max","geminivirus rep interacting kinase 2","protein_coding"
"Glyma.12G114300","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.12G204032","No alias","Glycine max","DTW domain-containing protein","protein_coding"
"Glyma.12G218500","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Glyma.12G230400","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.13G097600","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.13G100600","No alias","Glycine max","Cytidine/deoxycytidylate deaminase family protein","protein_coding"
"Glyma.13G218300","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding"
"Glyma.13G290300","No alias","Glycine max","Protein of unknown function (DUF688)","protein_coding"
"Glyma.13G304000","No alias","Glycine max","Auxin-responsive GH3 family protein","protein_coding"
"Glyma.14G014200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G024700","No alias","Glycine max","purple acid phosphatase 18","protein_coding"
"Glyma.14G050700","No alias","Glycine max","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"Glyma.14G079000","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.14G167000","No alias","Glycine max","bZIP transcription factor family protein","protein_coding"
"Glyma.14G186400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G220800","No alias","Glycine max","SGNH hydrolase-type esterase superfamily protein","protein_coding"
"Glyma.15G028300","No alias","Glycine max","Protein of unknown function (DUF3755)","protein_coding"
"Glyma.15G121600","No alias","Glycine max","SMAD/FHA domain-containing protein","protein_coding"
"Glyma.16G032800","No alias","Glycine max","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Glyma.16G058000","No alias","Glycine max","Alpha-L RNA-binding motif/Ribosomal protein S4 family protein","protein_coding"
"Glyma.16G088700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.17G065600","No alias","Glycine max","FGGY family of carbohydrate kinase","protein_coding"
"Glyma.17G121200","No alias","Glycine max","Transmembrane Fragile-X-F-associated protein","protein_coding"
"Glyma.17G214500","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.17G232260","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.17G234300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G060000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G126800","No alias","Glycine max","homeobox 1","protein_coding"
"Glyma.18G171800","No alias","Glycine max","CLAVATA3/ESR-RELATED 41","protein_coding"
"Glyma.18G270800","No alias","Glycine max","Malectin/receptor-like protein kinase family protein","protein_coding"
"Glyma.18G273200","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Glyma.19G105500","No alias","Glycine max","GRF zinc finger / Zinc knuckle protein","protein_coding"
"Glyma.19G233000","No alias","Glycine max","Protein of unknown function (DUF1624)","protein_coding"
"Glyma.20G057000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G147700","No alias","Glycine max","ovate family protein 12","protein_coding"
"Glyma.20G159400","No alias","Glycine max","PAR1 protein","protein_coding"
"Glyma.20G189100","No alias","Glycine max","Myotubularin-like phosphatases II superfamily","protein_coding"
"GRMZM2G001327","No alias","Zea mays","GTP binding Elongation factor Tu family protein","protein_coding"
"GRMZM2G006121","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G006293","No alias","Zea mays","Ribosomal protein S27a / Ubiquitin family protein","protein_coding"
"GRMZM2G010743","No alias","Zea mays","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein","protein_coding"
"GRMZM2G015100","No alias","Zea mays","nuclear assembly factor 1","protein_coding"
"GRMZM2G019325","No alias","Zea mays","ribosomal protein S11-beta","protein_coding"
"GRMZM2G024647","No alias","Zea mays","Ribosomal protein L6 family protein","protein_coding"
"GRMZM2G026216","No alias","Zea mays","Translation protein SH3-like family protein","protein_coding"
"GRMZM2G026983","No alias","Zea mays","Domain of unknown function (DUF3598)","protein_coding"
"GRMZM2G030072","No alias","Zea mays","ATP-dependent caseinolytic (Clp) protease/crotonase family protein","protein_coding"
"GRMZM2G030228","No alias","Zea mays","Ribosomal protein S8e family protein","protein_coding"
"GRMZM2G030433","No alias","Zea mays","RNAse E/G-like","protein_coding"
"GRMZM2G032104","No alias","Zea mays","tRNA/rRNA methyltransferase (SpoU) family protein","protein_coding"
"GRMZM2G033027","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G039711","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G048287","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G050825","No alias","Zea mays","Protein of unknown function (DUF3353)","protein_coding"
"GRMZM2G053434","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G054012","No alias","Zea mays","Ribosomal protein S30 family protein","protein_coding"
"GRMZM2G060886","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G063340","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"GRMZM2G073401","No alias","Zea mays","chaperonin 10","protein_coding"
"GRMZM2G074085","No alias","Zea mays","Ribosomal protein L31e family protein","protein_coding"
"GRMZM2G075630","No alias","Zea mays","60S acidic ribosomal protein family","protein_coding"
"GRMZM2G076399","No alias","Zea mays","Small nuclear ribonucleoprotein family protein","protein_coding"
"GRMZM2G080129","No alias","Zea mays","rRNA processing protein-related","protein_coding"
"GRMZM2G081519","No alias","Zea mays","5\'-3\' exonuclease family protein","protein_coding"
"GRMZM2G083253","No alias","Zea mays","ribosomal protein L23AB","protein_coding"
"GRMZM2G083497","No alias","Zea mays","ribosomal protein S15A","protein_coding"
"GRMZM2G083716","No alias","Zea mays","chaperonin 60 beta","protein_coding"
"GRMZM2G084868","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G087628","No alias","Zea mays","Nucleic acid-binding proteins superfamily","protein_coding"
"GRMZM2G092365","No alias","Zea mays","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"GRMZM2G100146","No alias","Zea mays","histone deacetylase 3","protein_coding"
"GRMZM2G100402","No alias","Zea mays","translocase outer membrane 20-2","protein_coding"
"GRMZM2G102891","No alias","Zea mays","60S acidic ribosomal protein family","protein_coding"
"GRMZM2G106056","No alias","Zea mays","DNA repair and meiosis protein (Mre11)","protein_coding"
"GRMZM2G108348","No alias","Zea mays","Ribosomal protein S4","protein_coding"
"GRMZM2G111022","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G119809","No alias","Zea mays","60S acidic ribosomal protein family","protein_coding"
"GRMZM2G121075","No alias","Zea mays","Ribosomal protein L11 family protein","protein_coding"
"GRMZM2G123495","No alias","Zea mays","Ribosomal protein L14p/L23e family protein","protein_coding"
"GRMZM2G124143","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G126821","No alias","Zea mays","40s ribosomal protein SA B","protein_coding"
"GRMZM2G128358","No alias","Zea mays","Nuclear transport factor 2 (NTF2) family protein","protein_coding"
"GRMZM2G148744","No alias","Zea mays","Ribosomal protein L22p/L17e family protein","protein_coding"
"GRMZM2G149768","No alias","Zea mays","GTP binding Elongation factor Tu family protein","protein_coding"
"GRMZM2G150286","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G151193","No alias","Zea mays","GTP binding Elongation factor Tu family protein","protein_coding"
"GRMZM2G153648","No alias","Zea mays","nuclear fusion defective 6","protein_coding"
"GRMZM2G157157","No alias","Zea mays","translocon at the outer envelope membrane of chloroplasts 34","protein_coding"
"GRMZM2G161506","No alias","Zea mays","RNA-binding CRS1 / YhbY (CRM) domain protein","protein_coding"
"GRMZM2G162764","No alias","Zea mays","HNH endonuclease","protein_coding"
"GRMZM2G168330","No alias","Zea mays","Ribosomal protein L14","protein_coding"
"GRMZM2G168674","No alias","Zea mays","Zinc-binding ribosomal protein family protein","protein_coding"
"GRMZM2G170336","No alias","Zea mays","UDP-D-glucuronate 4-epimerase 2","protein_coding"
"GRMZM2G171484","No alias","Zea mays","RNA binding Plectin/S10 domain-containing protein","protein_coding"
"GRMZM2G175510","No alias","Zea mays","TCP-1/cpn60 chaperonin family protein","protein_coding"
"GRMZM2G178968","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"GRMZM2G310002","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G326066","No alias","Zea mays","Ribosomal L27e protein family","protein_coding"
"GRMZM2G350399","No alias","Zea mays","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"GRMZM2G455828","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G484344","No alias","Zea mays","mraW methylase family protein","protein_coding"
"GRMZM5G801241","No alias","Zea mays","translocase inner membrane subunit 8","protein_coding"
"GRMZM5G808811","No alias","Zea mays","differentiation and greening-like 1","protein_coding"
"GRMZM5G819807","No alias","Zea mays","CLP protease R subunit 4","protein_coding"
"GRMZM5G850966","No alias","Zea mays","Ribosomal protein L36e family protein","protein_coding"
"GRMZM5G870752","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"GRMZM5G890561","No alias","Zea mays","Ribosomal protein L35Ae family protein","protein_coding"
"GRMZM5G897592","No alias","Zea mays","Cytochrome c","protein_coding"
"GRMZM6G820695","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"HORVU1Hr1G024040.1","No alias","Hordeum vulgare","component *(APC10) of (APC/C)-dependent ubiquitination catalytic core subcomplex","protein_coding"
"HORVU1Hr1G063250.8","No alias","Hordeum vulgare","phospholipase-A1 *(PC-PLA1)","protein_coding"
"HORVU2Hr1G001820.1","No alias","Hordeum vulgare","flavin-dependent monooxygenase *(YUCCA)","protein_coding"
"HORVU2Hr1G029350.2","No alias","Hordeum vulgare","uridylate kinase *(UMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G072210.3","No alias","Hordeum vulgare","arogenate dehydratase *(ADT)","protein_coding"
"HORVU2Hr1G073740.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G111050.1","No alias","Hordeum vulgare","ABC1 atypical protein kinase","protein_coding"
"HORVU2Hr1G111430.2","No alias","Hordeum vulgare","CLE precursor polypeptide","protein_coding"
"HORVU2Hr1G120400.1","No alias","Hordeum vulgare","accessory protein *(COQ4)","protein_coding"
"HORVU3Hr1G003050.1","No alias","Hordeum vulgare","glutamate decarboxylase *(GAD)","protein_coding"
"HORVU3Hr1G056330.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G064390.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G110830.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G116820.1","No alias","Hordeum vulgare","accessory protein *(COQ4)","protein_coding"
"HORVU3Hr1G116920.2","No alias","Hordeum vulgare","accessory protein *(COQ4)","protein_coding"
"HORVU4Hr1G051450.4","No alias","Hordeum vulgare","active component *(ALA) of ALA-ALIS flippase complex & P4-type ATPase component *(ALA) of phospholipid flippase complex & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"HORVU4Hr1G067280.2","No alias","Hordeum vulgare","EC_2.1 transferase transferring one-carbon group & homocysteine S-methyltransferase","protein_coding"
"HORVU4Hr1G086300.2","No alias","Hordeum vulgare","cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2 glycosylase","protein_coding"
"HORVU5Hr1G074450.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G083360.5","No alias","Hordeum vulgare","mRNA decay factor *(PAT1)","protein_coding"
"HORVU5Hr1G084070.1","No alias","Hordeum vulgare","3-dehydroquinate synthase *(DHQS)","protein_coding"
"HORVU6Hr1G022270.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G084830.1","No alias","Hordeum vulgare","palmitoyl-ACP thioesterase *(FATB)","protein_coding"
"Kfl00007_0460","kfl00007_0460_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00019_0440","kfl00019_0440_v1.1","Klebsormidium nitens","(at4g38360 : 318.0) Protein of unknown function (DUF300); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT1G77220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"Kfl00042_0120","kfl00042_0120_v1.1","Klebsormidium nitens","(at2g41000 : 113.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0140","kfl00045_0140_v1.1","Klebsormidium nitens","(at2g20650 : 533.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1066.0) &  (original description: no original description)","protein_coding"
"Kfl00083_g25","kfl00083_g25_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00101_0220","kfl00101_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00101_0230","kfl00101_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00114_0240","kfl00114_0240_v1.1","Klebsormidium nitens","(at4g36480 : 453.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"Kfl00123_0120","kfl00123_0120_v1.1","Klebsormidium nitens","(at1g13180 : 624.0) Mutant has defect in trichome cell expansion and  actin organization resulting in a distorted trichome phenotype.; DISTORTED TRICHOMES 1 (DIS1); FUNCTIONS IN: actin binding, structural constituent of cytoskeleton, ATP binding; INVOLVED IN: actin filament organization, multidimensional cell growth, cell morphogenesis, trichome morphogenesis; LOCATED IN: Arp2/3 protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000), Actin-related protein 3 (InterPro:IPR015623); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 12406 Blast hits to 12242 proteins in 2483 species: Archae - 6; Bacteria - 5; Metazoa - 5339; Fungi - 3178; Plants - 1454; Viruses - 2; Other Eukaryotes - 2422 (source: NCBI BLink). & (p17298|act2_orysa : 260.0) Actin-2 - Oryza sativa (Rice) & (reliability: 1248.0) &  (original description: no original description)","protein_coding"
"Kfl00139_0320","kfl00139_0320_v1.1","Klebsormidium nitens","(at3g54480 : 235.0) Encodes an SKP1 interacting partner (SKIP5).; SKP1/ASK-interacting protein 5 (SKIP5); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 36 Blast hits to 36 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"Kfl00167_0150","kfl00167_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00212_0150","kfl00212_0150_v1.1","Klebsormidium nitens","(at3g44680 : 637.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (p56521|hdac_maize : 506.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1274.0) &  (original description: no original description)","protein_coding"
"Kfl00213_0180","kfl00213_0180_v1.1","Klebsormidium nitens","(o49818|lgul_cicar : 270.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 252.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"Kfl00214_0110","kfl00214_0110_v1.1","Klebsormidium nitens","(at3g02600 : 184.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00220_0130","kfl00220_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00333_0140","kfl00333_0140_v1.1","Klebsormidium nitens","(at1g72175 : 184.0) FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G22510.1); Has 671 Blast hits to 671 proteins in 108 species: Archae - 0; Bacteria - 8; Metazoa - 504; Fungi - 36; Plants - 67; Viruses - 2; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00342_0160","kfl00342_0160_v1.1","Klebsormidium nitens","(at1g73600 : 642.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink). & (q9c6b9|peam3_arath : 642.0) Putative phosphoethanolamine N-methyltransferase 3 (EC 2.1.1.103) - Arabidopsis thaliana (Mouse-ear cress) & (reliability: 1284.0) &  (original description: no original description)","protein_coding"
"Kfl00348_0180","kfl00348_0180_v1.1","Klebsormidium nitens","(at1g16180 : 373.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1). & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"Kfl00360_0160","kfl00360_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00361_0120","kfl00361_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00373_0150","kfl00373_0150_v1.1","Klebsormidium nitens","(at1g37150 : 268.0) holocarboxylase synthetase 2 (HCS2); FUNCTIONS IN: biotin-[acetyl-CoA-carboxylase] ligase activity, catalytic activity; INVOLVED IN: protein modification process; EXPRESSED IN: pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Biotin protein ligase, C-terminal (InterPro:IPR003142), Biotin/lipoate A/B protein ligase (InterPro:IPR004143), Biotin--acetyl-CoA-carboxylase ligase (InterPro:IPR004408); BEST Arabidopsis thaliana protein match is: holocarboxylase synthase 1 (TAIR:AT2G25710.2); Has 6001 Blast hits to 6001 proteins in 2273 species: Archae - 223; Bacteria - 3976; Metazoa - 118; Fungi - 132; Plants - 62; Viruses - 0; Other Eukaryotes - 1490 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"Kfl00378_0110","kfl00378_0110_v1.1","Klebsormidium nitens","(at4g34412 : 158.0) CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"Kfl00399_0050","kfl00399_0050_v1.1","Klebsormidium nitens","(at2g44520 : 364.0) cytochrome c oxidase 10 (COX10); FUNCTIONS IN: protoheme IX farnesyltransferase activity, prenyltransferase activity; INVOLVED IN: heme o biosynthetic process, heme biosynthetic process; LOCATED IN: integral to membrane, mitochondrial membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protohaem IX farnesyltransferase, mitochondria (InterPro:IPR016315), Protohaem IX farnesyltransferase (InterPro:IPR006369), UbiA prenyltransferase (InterPro:IPR000537); Has 7990 Blast hits to 7990 proteins in 1845 species: Archae - 160; Bacteria - 4430; Metazoa - 177; Fungi - 179; Plants - 66; Viruses - 0; Other Eukaryotes - 2978 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00466_0050","kfl00466_0050_v1.1","Klebsormidium nitens","(at2g26140 : 699.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 340.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"Kfl00468_0010","kfl00468_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00477_0030","kfl00477_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00502_0070","kfl00502_0070_v1.1","Klebsormidium nitens","(at3g45100 : 589.0) encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway.; SETH2; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PIGA, GPI anchor biosynthesis (InterPro:IPR013234), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G73160.1); Has 19927 Blast hits to 19902 proteins in 2481 species: Archae - 910; Bacteria - 15350; Metazoa - 164; Fungi - 171; Plants - 192; Viruses - 0; Other Eukaryotes - 3140 (source: NCBI BLink). & (reliability: 1178.0) &  (original description: no original description)","protein_coding"
"Kfl00505_0030","kfl00505_0030_v1.1","Klebsormidium nitens","(at5g43860 : 125.0) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.; chlorophyllase 2 (CLH2); CONTAINS InterPro DOMAIN/s: Chlorophyllase-like (InterPro:IPR010821), Chlorophyllase, chloroplast (InterPro:IPR017395); BEST Arabidopsis thaliana protein match is: chlorophyllase 1 (TAIR:AT1G19670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mv14|clh1_citsi : 98.6) Chlorophyllase-1, chloroplast precursor (EC 3.1.1.14) (Chlorophyll-chlorophyllido hydrolase 1) (Chlase 1) - Citrus sinensis (Sweet orange) & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"Kfl00530_0070","kfl00530_0070_v1.1","Klebsormidium nitens","(at5g67610 : 149.0) Uncharacterized conserved protein (DUF2215); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2215 (InterPro:IPR019358); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2215) (TAIR:AT3G49840.1); Has 145 Blast hits to 145 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00587_0070","kfl00587_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00689_0030","kfl00689_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00691_0030","kfl00691_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00747_0040","kfl00747_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00916_0010","kfl00916_0010_v1.1","Klebsormidium nitens","(at5g51040 : 134.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00947_0040","kfl00947_0040_v1.1","Klebsormidium nitens","(at5g02230 : 82.8) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"Kfl01247_g1","kfl01247_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01337_0010","kfl01337_0010_v1.1","Klebsormidium nitens","(at2g03690 : 270.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g21850","No alias","Oryza sativa","protein transport protein-related, putative, expressed","protein_coding"
"LOC_Os01g40870","No alias","Oryza sativa","aldehyde dehydrogenase, putative, expressed","protein_coding"
"LOC_Os01g43060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g55840","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os01g56100","No alias","Oryza sativa","BSD domain containing protein, expressed","protein_coding"
"LOC_Os01g65790","No alias","Oryza sativa","pectinesterase, putative, expressed","protein_coding"
"LOC_Os01g68598","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g70350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g71180","No alias","Oryza sativa","pentatricopeptide repeat protein PPR1106-17, putative, expressed","protein_coding"
"LOC_Os01g71790","No alias","Oryza sativa","NAM, putative, expressed","protein_coding"
"LOC_Os02g01700","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os02g04325","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g06650","No alias","Oryza sativa","COX VIIa, putative, expressed","protein_coding"
"LOC_Os02g08460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g13310","No alias","Oryza sativa","homeobox domain containing protein, expressed","protein_coding"
"LOC_Os02g13760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g14860","No alias","Oryza sativa","prefoldin subunit, putative, expressed","protein_coding"
"LOC_Os02g29240","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g35940","No alias","Oryza sativa","gibberellin receptor GID1L2, putative, expressed","protein_coding"
"LOC_Os02g36360","No alias","Oryza sativa","ZOS2-11 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os02g37490","No alias","Oryza sativa","glycine-rich cell wall structural protein precursor, putative, expressed","protein_coding"
"LOC_Os02g40840","No alias","Oryza sativa","alcohol oxidase, putative, expressed","protein_coding"
"LOC_Os02g45180","No alias","Oryza sativa","ORM1, putative, expressed","protein_coding"
"LOC_Os02g53430","No alias","Oryza sativa","DNA-3-methyladenine glycosylase, putative, expressed","protein_coding"
"LOC_Os02g56250","No alias","Oryza sativa","GATA zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os03g02730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g06350","No alias","Oryza sativa","DUF623 domain containing protein, expressed","protein_coding"
"LOC_Os03g06870","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g06930","No alias","Oryza sativa","homeodomain protein, putative, expressed","protein_coding"
"LOC_Os03g11990","No alias","Oryza sativa","bolA, putative, expressed","protein_coding"
"LOC_Os03g29830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g29920","No alias","Oryza sativa","proline-rich protein, putative, expressed","protein_coding"
"LOC_Os03g42070","No alias","Oryza sativa","cyclin, putative, expressed","protein_coding"
"LOC_Os03g44450","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g46310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g58764","No alias","Oryza sativa","OsFBDUF18 - F-box and DUF domain containing protein, expressed","protein_coding"
"LOC_Os04g26620","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g35560","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os04g38910","No alias","Oryza sativa","atypical receptor-like kinase MARK, putative, expressed","protein_coding"
"LOC_Os04g41110","No alias","Oryza sativa","Rad21 / Rec8 like protein, putative, expressed","protein_coding"
"LOC_Os04g44770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g55120","No alias","Oryza sativa","jp18, putative, expressed","protein_coding"
"LOC_Os04g57780","No alias","Oryza sativa","tetratricopeptide repeat domain containing protein, expressed","protein_coding"
"LOC_Os04g57790","No alias","Oryza sativa","ubiquinone biosynthesis protein COQ4, putative, expressed","protein_coding"
"LOC_Os04g57850","No alias","Oryza sativa","AMP-binding enzyme, putative, expressed","protein_coding"
"LOC_Os05g09650","No alias","Oryza sativa","ubiquinone biosynthesis protein COQ4, putative, expressed","protein_coding"
"LOC_Os05g15950","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g24010","No alias","Oryza sativa","receptor protein kinase-like, putative, expressed","protein_coding"
"LOC_Os05g34500","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g38600","No alias","Oryza sativa","ZOS5-09 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os06g07978","No alias","Oryza sativa","peptidase, T1 family, putative, expressed","protein_coding"
"LOC_Os06g14060","No alias","Oryza sativa","MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed","protein_coding"
"LOC_Os06g43190","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g48680","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08710","No alias","Oryza sativa","AT hook-containing DNA-binding protein, putative, expressed","protein_coding"
"LOC_Os07g14310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g28210","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g33850","No alias","Oryza sativa","ras-related protein, putative, expressed","protein_coding"
"LOC_Os07g38810","No alias","Oryza sativa","lectin receptor-type protein kinase, putative, expressed","protein_coding"
"LOC_Os07g39120","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g43850","No alias","Oryza sativa","nucleic acid binding protein, putative, expressed","protein_coding"
"LOC_Os08g27540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g33550","No alias","Oryza sativa","transposon protein, putative, Mutator sub-class, expressed","protein_coding"
"LOC_Os08g38400","No alias","Oryza sativa","oligopeptide transporter, putative, expressed","protein_coding"
"LOC_Os08g38980","No alias","Oryza sativa","chloride transporter, chloride channel family, putative, expressed","protein_coding"
"LOC_Os08g41820","No alias","Oryza sativa","exo70 exocyst complex subunit domain containing protein, expressed","protein_coding"
"LOC_Os09g08400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g35540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g36860","No alias","Oryza sativa","acyl carrier protein, putative, expressed","protein_coding"
"LOC_Os10g06580","No alias","Oryza sativa","cyclin-dependent kinase G-1, putative, expressed","protein_coding"
"LOC_Os10g31864","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g40810","No alias","Oryza sativa","GATA zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os10g41230","No alias","Oryza sativa","homeobox associated leucine zipper, putative, expressed","protein_coding"
"LOC_Os11g04560","No alias","Oryza sativa","calmodulin-like protein 1, putative, expressed","protein_coding"
"LOC_Os11g06610","No alias","Oryza sativa","jasmonate-induced protein, putative, expressed","protein_coding"
"LOC_Os11g19760","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os11g30560","No alias","Oryza sativa","dehydrogenase/reductase, putative, expressed","protein_coding"
"LOC_Os11g39060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g01410","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g02814","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os12g36640","No alias","Oryza sativa","universal stress protein domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g42020","No alias","Oryza sativa","AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os12g42120","No alias","Oryza sativa","PPR repeat containing protein, expressed","protein_coding"
"Mp1g01030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g08160.1","No alias","Marchantia polymorpha","component RPP2 of LSU proteome component","protein_coding"
"Mp1g08750.1","No alias","Marchantia polymorpha","Probable protein S-acyltransferase 16 OS=Arabidopsis thaliana (sp|q93vv0|zdhc6_arath : 129.0)","protein_coding"
"Mp1g08870.1","No alias","Marchantia polymorpha","component MTA of adenosine N6-methyltransferase complex","protein_coding"
"Mp1g13380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g21180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g10210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g15620.1","No alias","Marchantia polymorpha","PEX1-PEX6 recruitment component APM9 of receptor export system","protein_coding"
"Mp2g16480.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g26280.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g04200.1","No alias","Marchantia polymorpha","component Tim8 of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"Mp3g14360.1","No alias","Marchantia polymorpha","component ADO of SCF E3 ubiquitin ligase complex. photoreceptor (ADO)","protein_coding"
"Mp3g20660.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g22590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g03420.1","No alias","Marchantia polymorpha","component FBX of SCF E3 ubiquitin ligase complex","protein_coding"
"Mp4g18050.1","No alias","Marchantia polymorpha","component SPCs1 of SPC endoplasmic signal peptidase complex","protein_coding"
"Mp5g02970.1","No alias","Marchantia polymorpha","accessory protein (COQ4)","protein_coding"
"Mp6g03560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g01980.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g15980.1","No alias","Marchantia polymorpha","LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica (sp|q6z4u4|bak1_orysj : 390.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 61.8)","protein_coding"
"Mp7g18050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g06960.1","No alias","Marchantia polymorpha","UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (LpxD)","protein_coding"
"Mp8g12030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g14670.1","No alias","Marchantia polymorpha","component MED10 of middle module of MEDIATOR transcription co-activator complex","protein_coding"
"Potri.008G097100","No alias","Populus trichocarpa","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Potri.010G157500","No alias","Populus trichocarpa","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Pp1s10_386V6","No alias","Physcomitrella patens","dpy-30 homolog","protein_coding"
"Pp1s203_53V6","No alias","Physcomitrella patens","flagellar wd repeat protein pf20","protein_coding"
"Pp1s206_50V6","No alias","Physcomitrella patens","pectate lyase","protein_coding"
"Pp1s226_17V6","No alias","Physcomitrella patens","ubiquinone biosynthesis","protein_coding"
"Pp1s268_14V6","No alias","Physcomitrella patens","chaperone protein","protein_coding"
"Pp1s67_133V6","No alias","Physcomitrella patens","MAB16.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"PSME_00008048-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00008189-RA","No alias","Pseudotsuga menziesii","(at4g03100 : 311.0) Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 3907 Blast hits to 3903 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 2865; Fungi - 460; Plants - 187; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"PSME_00009788-RA","No alias","Pseudotsuga menziesii","(at3g54670 : 223.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"PSME_00017330-RA","No alias","Pseudotsuga menziesii","(q42910|ppdk_mescr : 1442.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 1390.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2780.0) &  (original description: no original description)","protein_coding"
"PSME_00018923-RA","No alias","Pseudotsuga menziesii","(at5g49030 : 198.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00020219-RA","No alias","Pseudotsuga menziesii","(at2g03690 : 274.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"PSME_00020747-RA","No alias","Pseudotsuga menziesii","(at1g71830 : 917.0) Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development  controlling male gametophyte production.  later; somatic embryogenesis receptor-like kinase 1 (SERK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: somatic embryogenesis receptor-like kinase 2 (TAIR:AT1G34210.1); Has 181670 Blast hits to 121787 proteins in 4268 species: Archae - 123; Bacteria - 18224; Metazoa - 45784; Fungi - 8994; Plants - 88758; Viruses - 411; Other Eukaryotes - 19376 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 232.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1834.0) &  (original description: no original description)","protein_coding"
"PSME_00022540-RA","No alias","Pseudotsuga menziesii","(at5g10080 : 393.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 786.0) &  (original description: no original description)","protein_coding"
"PSME_00023853-RA","No alias","Pseudotsuga menziesii","(at1g71120 : 243.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 149.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00026161-RA","No alias","Pseudotsuga menziesii","(at3g20500 : 598.0) purple acid phosphatase 18 (PAP18); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2123 Blast hits to 2103 proteins in 464 species: Archae - 3; Bacteria - 774; Metazoa - 209; Fungi - 79; Plants - 766; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (q09131|ppaf_soybn : 279.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"PSME_00033084-RA","No alias","Pseudotsuga menziesii","(at1g25145 : 125.0) UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00035720-RA","No alias","Pseudotsuga menziesii","(at1g32340 : 527.0) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine.; NDR1/HIN1-like 8 (NHL8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3653 Blast hits to 3199 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1736; Fungi - 604; Plants - 670; Viruses - 7; Other Eukaryotes - 636 (source: NCBI BLink). & (reliability: 1054.0) &  (original description: no original description)","protein_coding"
"PSME_00037728-RA","No alias","Pseudotsuga menziesii","(at4g19450 : 466.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G45275.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 932.0) &  (original description: no original description)","protein_coding"
"PSME_00040777-RA","No alias","Pseudotsuga menziesii","(at2g46690 : 103.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT3G61900.1); Has 1291 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1290; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00043522-RA","No alias","Pseudotsuga menziesii",""(at3g52970 : 375.0) member of CYP76G; ""cytochrome P450, family 76, subfamily G, polypeptide 1"" (CYP76G1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1). & (p37120|c75a2_solme : 357.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 704.0) &  (original description: no original description)"","protein_coding"
"PSME_00043882-RA","No alias","Pseudotsuga menziesii","(at5g49030 : 258.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00044758-RA","No alias","Pseudotsuga menziesii","(at5g50230 : 553.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Autophagy-related protein 16 (InterPro:IPR013923), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 76401 Blast hits to 35303 proteins in 1111 species: Archae - 133; Bacteria - 9405; Metazoa - 31134; Fungi - 15838; Plants - 8951; Viruses - 22; Other Eukaryotes - 10918 (source: NCBI BLink). & (p25387|gblp_chlre : 87.4) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"PSME_00048628-RA","No alias","Pseudotsuga menziesii","(at5g60580 : 155.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1); Has 1580 Blast hits to 1234 proteins in 158 species: Archae - 0; Bacteria - 10; Metazoa - 420; Fungi - 112; Plants - 626; Viruses - 18; Other Eukaryotes - 394 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00049051-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"Seita.2G123900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G018400.1","No alias","Setaria italica ","accessory protein *(COQ4)","protein_coding"
"Sobic.002G318501.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G263900.1","No alias","Sorghum bicolor ","accessory protein *(COQ4)","protein_coding"
"Sobic.010G278100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g006850","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H9M3_POPTR)","protein_coding"
"Solyc01g080190","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RSR9_RICCO)","protein_coding"
"Solyc01g087390","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g096040","No alias","Solanum lycopersicum","Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G01300.1)","protein_coding"
"Solyc01g096440","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061EFM5_THECC)","protein_coding"
"Solyc01g102790","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0K9NUC3_ZOSMR)","protein_coding"
"Solyc01g105710","No alias","Solanum lycopersicum","peptidyl-prolyl isomerase FKBP12","protein_coding"
"Solyc01g109090","No alias","Solanum lycopersicum","LOW QUALITY:mRNA, clone: RTFL01-34-C05 (AHRD V3.3 -** E4MXL5_EUTHA)","protein_coding"
"Solyc02g076710","No alias","Solanum lycopersicum","Cysteine protease (AHRD V3.3 *** Q7XYU8_ANTAD)","protein_coding"
"Solyc02g077650","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9N3J7_POPTR)","protein_coding"
"Solyc02g077910","No alias","Solanum lycopersicum","Mitochondrial carrier protein, expressed (AHRD V3.3 *** A0A0K9PZC5_ZOSMR)","protein_coding"
"Solyc02g079820","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XF40_CYNCS)","protein_coding"
"Solyc02g080950","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XCX1_CYNCS)","protein_coding"
"Solyc02g084240","No alias","Solanum lycopersicum","H1 histone-like protein","protein_coding"
"Solyc02g084830","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YGR3_CYNCS)","protein_coding"
"Solyc03g007350","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A061EH92_THECC)","protein_coding"
"Solyc03g031440","No alias","Solanum lycopersicum","Quinone reductase family protein (AHRD V3.3 *** AT4G27270.1)","protein_coding"
"Solyc03g032090","No alias","Solanum lycopersicum","Amino acid transporter, putative (AHRD V3.3 *** B9S6V9_RICCO)","protein_coding"
"Solyc03g093630","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0K9PNP9_ZOSMR)","protein_coding"
"Solyc03g116540","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SY25_RICCO)","protein_coding"
"Solyc03g121040","No alias","Solanum lycopersicum","Clavaminate synthase-like protein (AHRD V3.3 *** W9REK5_9ROSA)","protein_coding"
"Solyc04g009220","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T720_RICCO)","protein_coding"
"Solyc04g014710","No alias","Solanum lycopersicum","Autophagy-related protein 9 (AHRD V3.3 *** A0A1D1ZI98_9ARAE)","protein_coding"
"Solyc04g015560","No alias","Solanum lycopersicum","Beta-glucosidase (AHRD V3.3 *** A0A0B4PJM3_SOYBN)","protein_coding"
"Solyc04g051600","No alias","Solanum lycopersicum","tRNA(His) guanylyltransferase 2 (AHRD V3.3 *** THG2_ARATH)","protein_coding"
"Solyc04g072880","No alias","Solanum lycopersicum","CycH1_2","protein_coding"
"Solyc04g076330","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199VX93_ANACO)","protein_coding"
"Solyc04g082650","No alias","Solanum lycopersicum","S-acyltransferase (AHRD V3.3 *** K4BVZ2_SOLLC)","protein_coding"
"Solyc05g012150","No alias","Solanum lycopersicum","Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial (AHRD V3.3 *** K4BXT8_SOLLC)","protein_coding"
"Solyc06g006000","No alias","Solanum lycopersicum","Maternal effect embryo arrest 59 (AHRD V3.3 *** A0A061GXA8_THECC)","protein_coding"
"Solyc06g006100","No alias","Solanum lycopersicum","Anthranilate synthase (AHRD V3.3 *** A0A0K9NQE9_ZOSMR)","protein_coding"
"Solyc06g009620","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061F8B1_THECC)","protein_coding"
"Solyc06g048960","No alias","Solanum lycopersicum","Dicer-like 2a","protein_coding"
"Solyc06g062290","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** K4C6W0_SOLLC)","protein_coding"
"Solyc06g073740","No alias","Solanum lycopersicum","Beta-glucosidase (AHRD V3.3 *** A0A0B4PJM3_SOYBN)","protein_coding"
"Solyc06g082600","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme E2-like protein (AHRD V3.3 *** Q2PYY4_SOLTU)","protein_coding"
"Solyc07g008540","No alias","Solanum lycopersicum","chloroplast import apparatus 2 (AHRD V3.3 *** AT5G57180.2)","protein_coding"
"Solyc07g043610","No alias","Solanum lycopersicum","Auxin response factor_SGN-U230670","protein_coding"
"Solyc07g053850","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT4G28370.4)","protein_coding"
"Solyc07g055540","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** A0A124SAX2_CYNCS)","protein_coding"
"Solyc07g064230","No alias","Solanum lycopersicum","Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** AT4G27100.2)","protein_coding"
"Solyc08g005490","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G31850.4)","protein_coding"
"Solyc08g008020","No alias","Solanum lycopersicum","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** AT4G11610.2)","protein_coding"
"Solyc08g078600","No alias","Solanum lycopersicum","DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B0N397_GOSAR)","protein_coding"
"Solyc08g082370","No alias","Solanum lycopersicum","LOW QUALITY:calpain-type cysteine protease family (AHRD V3.3 --* AT1G55350.6)","protein_coding"
"Solyc09g007040","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** D7LUH3_ARALL)","protein_coding"
"Solyc09g008300","No alias","Solanum lycopersicum","LOW QUALITY:Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EAZ8_THECC)","protein_coding"
"Solyc09g075170","No alias","Solanum lycopersicum","Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G62890.1)","protein_coding"
"Solyc09g091050","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* AT5G04220.1)","protein_coding"
"Solyc09g092050","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9GFV9_POPTR)","protein_coding"
"Solyc10g008570","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A124SD53_CYNCS)","protein_coding"
"Solyc10g008590","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RB17_RICCO)","protein_coding"
"Solyc10g080780","No alias","Solanum lycopersicum","bZIP transcription factor family protein (AHRD V3.3 *** AT5G06950.5)","protein_coding"
"Solyc10g084540","No alias","Solanum lycopersicum","Phosphatidate phosphatase LPIN2-like protein (AHRD V3.3 *-* A0A0B2P3Z9_GLYSO)","protein_coding"
"Solyc11g008050","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g022380","No alias","Solanum lycopersicum","Phosphoinositide phosphatase family protein (AHRD V3.3 *** AT1G22620.1)","protein_coding"
"Solyc11g067210","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XH63_CYNCS)","protein_coding"
"Solyc11g071370","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9GHN6_POPTR)","protein_coding"
"Solyc12g010180","No alias","Solanum lycopersicum","Anthranilate synthase (AHRD V3.3 *** A0A0K9PKR0_ZOSMR)","protein_coding"
"Solyc12g010740","No alias","Solanum lycopersicum","Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *-* C0LGQ2_ARATH)","protein_coding"
"Solyc12g014330","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9STL7_RICCO)","protein_coding"
"Solyc12g096760","No alias","Solanum lycopersicum","NADP-dependent alkenal double bond reductase (AHRD V3.3 *** A0A072TWU1_MEDTR)","protein_coding"
"Solyc12g100310","No alias","Solanum lycopersicum","Protein kinase family protein (AHRD V3.3 *** AT3G13670.1)","protein_coding"
"Sopen05g006940","No alias","Solanum pennellii","Coenzyme Q (ubiquinone) biosynthesis protein Coq4","protein_coding"