"sequence_id","alias","species","description","type" "10140","No alias","Selaginella moellendorffii ","DNA helicase (RECQl4A)","protein_coding" "104103","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "114130","No alias","Selaginella moellendorffii ","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding" "133091","No alias","Selaginella moellendorffii ","WD-40 repeat family protein / notchless protein, putative","protein_coding" "133451","No alias","Selaginella moellendorffii ","F-box family protein","protein_coding" "145521","No alias","Selaginella moellendorffii ","damaged DNA binding protein 1A","protein_coding" "148941","No alias","Selaginella moellendorffii ","phosphoenolpyruvate carboxylase 4","protein_coding" "156135","No alias","Selaginella moellendorffii ","ribonuclease II family protein","protein_coding" "156878","No alias","Selaginella moellendorffii ","fimbrin 1","protein_coding" "166593","No alias","Selaginella moellendorffii ","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "170122","No alias","Selaginella moellendorffii ","gamma-tubulin","protein_coding" "267194","No alias","Selaginella moellendorffii ","tobamovirus multiplication protein 3","protein_coding" "27859","No alias","Selaginella moellendorffii ","xylose isomerase family protein","protein_coding" "402571","No alias","Selaginella moellendorffii ","RECQ helicase L4B","protein_coding" "404338","No alias","Selaginella moellendorffii ","Integrase-type DNA-binding superfamily protein","protein_coding" "404377","No alias","Selaginella moellendorffii ","TOPLESS-related 1","protein_coding" "405303","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "405542","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "408722","No alias","Selaginella moellendorffii ","MUTL-homologue 1","protein_coding" "409868","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "411685","No alias","Selaginella moellendorffii ","RNA cyclase family protein","protein_coding" "413436","No alias","Selaginella moellendorffii ","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "417287","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding" "417629","No alias","Selaginella moellendorffii ","Homeodomain-like superfamily protein","protein_coding" "418466","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "422588","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "424000","No alias","Selaginella moellendorffii ","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "425076","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "425635","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "427260","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "427917","No alias","Selaginella moellendorffii ","Amidohydrolase family","protein_coding" "428897","No alias","Selaginella moellendorffii ","Regulator of chromosome condensation (RCC1) family protein","protein_coding" "437958","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding" "440060","No alias","Selaginella moellendorffii ","transcription regulators","protein_coding" "441302","No alias","Selaginella moellendorffii ","nine-cis-epoxycarotenoid dioxygenase 9","protein_coding" "444608","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "446102","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "447027","No alias","Selaginella moellendorffii ","Insulinase (Peptidase family M16) family protein","protein_coding" "448426","No alias","Selaginella moellendorffii ","ubiquitin-protein ligases","protein_coding" "68680","No alias","Selaginella moellendorffii ","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "75337","No alias","Selaginella moellendorffii ","DNA-directed RNA polymerase family protein","protein_coding" "75439","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 15","protein_coding" "76535","No alias","Selaginella moellendorffii ","Apoptosis inhibitory protein 5 (API5)","protein_coding" "78845","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding" "79650","No alias","Selaginella moellendorffii ","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "80512","No alias","Selaginella moellendorffii ","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein","protein_coding" "86099","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding" "89705","No alias","Selaginella moellendorffii ","NAD(P)H dehydrogenase (quinone)s","protein_coding" "91529","No alias","Selaginella moellendorffii ","nine-cis-epoxycarotenoid dioxygenase 4","protein_coding" "98103","No alias","Selaginella moellendorffii ","RAB GTPASE HOMOLOG B18","protein_coding" "99561","No alias","Selaginella moellendorffii ","embryo defective 3012","protein_coding" "99647","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "A4A49_09660","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 4b","protein_coding" "A4A49_24860","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 4a","protein_coding" "AC212023.4_FG007","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "At1g01320","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HS99]","protein_coding" "At1g03060","No alias","Arabidopsis thaliana","Protein SPIRRIG [Source:UniProtKB/Swiss-Prot;Acc:F4HZB2]","protein_coding" "At1g04120","No alias","Arabidopsis thaliana","MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2]","protein_coding" "At1g06760","No alias","Arabidopsis thaliana","Histone H1.1 [Source:UniProtKB/Swiss-Prot;Acc:P26568]","protein_coding" "At1g08610","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g08610 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRS4]","protein_coding" "At1g10320","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY74]","protein_coding" "At1g10930","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like 4A [Source:UniProtKB/Swiss-Prot;Acc:Q8L840]","protein_coding" "At1g12620","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]","protein_coding" "At1g14830","No alias","Arabidopsis thaliana","DRP1C [Source:UniProtKB/TrEMBL;Acc:A0A178W4V6]","protein_coding" "At1g15660","No alias","Arabidopsis thaliana","Centromere protein C [Source:UniProtKB/Swiss-Prot;Acc:Q66LG9]","protein_coding" "At1g18370","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-7A [Source:UniProtKB/Swiss-Prot;Acc:Q8S905]","protein_coding" "At1g18490","No alias","Arabidopsis thaliana","Plant cysteine oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3U6]","protein_coding" "At1g20960","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]","protein_coding" "At1g21650","No alias","Arabidopsis thaliana","Protein translocase subunit SecA [Source:UniProtKB/TrEMBL;Acc:F4HY36]","protein_coding" "At1g24764","No alias","Arabidopsis thaliana","microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]","protein_coding" "At1g25390","No alias","Arabidopsis thaliana","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6K9]","protein_coding" "At1g26640","No alias","Arabidopsis thaliana","Isopentenyl phosphate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F7]","protein_coding" "At1g29350","No alias","Arabidopsis thaliana","Kinase-related protein of unknown function (DUF1296) [Source:TAIR;Acc:AT1G29350]","protein_coding" "At1g29900","No alias","Arabidopsis thaliana","Carbamoyl-phosphate synthase large chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42601]","protein_coding" "At1g30410","No alias","Arabidopsis thaliana","multidrug resistance-associated protein 13 [Source:TAIR;Acc:AT1G30410]","protein_coding" "At1g31360","No alias","Arabidopsis thaliana","RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]","protein_coding" "At1g31730","No alias","Arabidopsis thaliana","AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]","protein_coding" "At1g34340","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XID7]","protein_coding" "At1g35220","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in /.../cies: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). [Source:TAIR;Acc:AT1G35220]","protein_coding" "At1g44780","No alias","Arabidopsis thaliana","Translation initiation factor [Source:UniProtKB/TrEMBL;Acc:Q5Q0F0]","protein_coding" "At1g49540","No alias","Arabidopsis thaliana","Elongator protein 2 [Source:UniProtKB/TrEMBL;Acc:F4I1S8]","protein_coding" "At1g50500","No alias","Arabidopsis thaliana","Membrane trafficking VPS53 family protein [Source:TAIR;Acc:AT1G50500]","protein_coding" "At1g52420","No alias","Arabidopsis thaliana","At1g52420 [Source:UniProtKB/TrEMBL;Acc:Q9SSP6]","protein_coding" "At1g52500","No alias","Arabidopsis thaliana","Formamidopyrimidine-DNA glycosylase [Source:UniProtKB/Swiss-Prot;Acc:O80358]","protein_coding" "At1g54220","No alias","Arabidopsis thaliana","Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]","protein_coding" "At1g54460","No alias","Arabidopsis thaliana","Protein WVD2-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASW8]","protein_coding" "At1g57700","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I854]","protein_coding" "At1g57820","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase ORTHRUS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ0]","protein_coding" "At1g58250","No alias","Arabidopsis thaliana","HYPERSENSITIVE TO PI STARVATION 4 [Source:UniProtKB/TrEMBL;Acc:F4I9T6]","protein_coding" "At1g64330","No alias","Arabidopsis thaliana","At1g64330 [Source:UniProtKB/TrEMBL;Acc:Q9C7V7]","protein_coding" "At1g67720","No alias","Arabidopsis thaliana","Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI2]","protein_coding" "At1g71210","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g71210, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA6]","protein_coding" "At1g72670","No alias","Arabidopsis thaliana","At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]","protein_coding" "At1g74690","No alias","Arabidopsis thaliana","Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]","protein_coding" "At1g80010","No alias","Arabidopsis thaliana","Protein FAR1-RELATED SEQUENCE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9S793]","protein_coding" "At1g80070","No alias","Arabidopsis thaliana","SUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]","protein_coding" "At2g01250","No alias","Arabidopsis thaliana","60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]","protein_coding" "At2g16950","No alias","Arabidopsis thaliana","transportin 1 [Source:TAIR;Acc:AT2G16950]","protein_coding" "At2g17980","No alias","Arabidopsis thaliana","SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]","protein_coding" "At2g18220","No alias","Arabidopsis thaliana","Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPV5]","protein_coding" "At2g36200","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4ILV6]","protein_coding" "At2g36490","No alias","Arabidopsis thaliana","Protein ROS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ6]","protein_coding" "At2g36810","No alias","Arabidopsis thaliana","Protein SHOOT GRAVITROPISM 6 [Source:UniProtKB/Swiss-Prot;Acc:F4IP13]","protein_coding" "At2g37500","No alias","Arabidopsis thaliana","Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VUS6]","protein_coding" "At2g41720","No alias","Arabidopsis thaliana","EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]","protein_coding" "At2g45540","No alias","Arabidopsis thaliana","BEACH domain-containing protein C2 [Source:UniProtKB/Swiss-Prot;Acc:F4IG73]","protein_coding" "At2g45900","No alias","Arabidopsis thaliana","TRM13 [Source:UniProtKB/TrEMBL;Acc:A0A178VUV9]","protein_coding" "At3g01160","No alias","Arabidopsis thaliana","Pre-rRNA-processing ESF1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9MAC6]","protein_coding" "At3g02260","No alias","Arabidopsis thaliana","Auxin transport protein BIG [Source:UniProtKB/Swiss-Prot;Acc:Q9SRU2]","protein_coding" "At3g03130","No alias","Arabidopsis thaliana","LisH domain-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M9N2]","protein_coding" "At3g03340","No alias","Arabidopsis thaliana","LUC7 related protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRM4]","protein_coding" "At3g05130","No alias","Arabidopsis thaliana","Paramyosin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA6]","protein_coding" "At3g06030","No alias","Arabidopsis thaliana","Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O22042]","protein_coding" "At3g06980","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUG7]","protein_coding" "At3g09360","No alias","Arabidopsis thaliana","Cyclin/Brf1-like TBP-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WVQ3]","protein_coding" "At3g11130","No alias","Arabidopsis thaliana","Clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNJ6]","protein_coding" "At3g13290","No alias","Arabidopsis thaliana","Varicose-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LTT9]","protein_coding" "At3g17830","No alias","Arabidopsis thaliana","At3g17830 [Source:UniProtKB/TrEMBL;Acc:Q058J9]","protein_coding" "At3g19510","No alias","Arabidopsis thaliana","Homeobox protein HAT3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q04996]","protein_coding" "At3g20150","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-12F [Source:UniProtKB/Swiss-Prot;Acc:F4JDI6]","protein_coding" "At3g22380","No alias","Arabidopsis thaliana","Time for coffee [Source:UniProtKB/TrEMBL;Acc:B3H7F6]","protein_coding" "At3g24870","No alias","Arabidopsis thaliana","Chromatin modification-related protein EAF1 B [Source:UniProtKB/Swiss-Prot;Acc:F4J7T2]","protein_coding" "At3g25840","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWN3]","protein_coding" "At3g26730","No alias","Arabidopsis thaliana","Putative RING zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LSE3]","protein_coding" "At3g44600","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP71 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4D0]","protein_coding" "At3g46530","No alias","Arabidopsis thaliana","Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]","protein_coding" "At3g49260","No alias","Arabidopsis thaliana","IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]","protein_coding" "At3g51280","No alias","Arabidopsis thaliana","Protein POLLENLESS 3-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD20]","protein_coding" "At3g51310","No alias","Arabidopsis thaliana","Vacuolar protein sorting-associated protein 35C [Source:UniProtKB/Swiss-Prot;Acc:A8R7K9]","protein_coding" "At3g54980","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g54980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SV46]","protein_coding" "At3g56860","No alias","Arabidopsis thaliana","UBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]","protein_coding" "At3g56870","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q5XVA1]","protein_coding" "At3g57060","No alias","Arabidopsis thaliana","Condensin complex subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4J246]","protein_coding" "At3g61150","No alias","Arabidopsis thaliana","HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]","protein_coding" "At3g62080","No alias","Arabidopsis thaliana","SNF7 family protein [Source:UniProtKB/TrEMBL;Acc:F4IX33]","protein_coding" "At4g01780","No alias","Arabidopsis thaliana","XH/XS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG55]","protein_coding" "At4g02510","No alias","Arabidopsis thaliana","Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]","protein_coding" "At4g02710","No alias","Arabidopsis thaliana","Protein NETWORKED 1C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQX8]","protein_coding" "At4g02800","No alias","Arabidopsis thaliana","At4g02800 [Source:UniProtKB/TrEMBL;Acc:Q9SY05]","protein_coding" "At4g03100","No alias","Arabidopsis thaliana","Rho GTPase-activating protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JI46]","protein_coding" "At4g05520","No alias","Arabidopsis thaliana","EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]","protein_coding" "At4g10480","No alias","Arabidopsis thaliana","Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]","protein_coding" "At4g14200","No alias","Arabidopsis thaliana","Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUM8]","protein_coding" "At4g18300","No alias","Arabidopsis thaliana","Initiation factor-2Bepsilon-like protein [Source:UniProtKB/TrEMBL;Acc:O49733]","protein_coding" "At4g21190","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g21190 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG95]","protein_coding" "At4g21820","No alias","Arabidopsis thaliana","binding;calmodulin binding [Source:TAIR;Acc:AT4G21820]","protein_coding" "At4g23460","No alias","Arabidopsis thaliana","Beta-adaptin-like protein C [Source:UniProtKB/Swiss-Prot;Acc:O81742]","protein_coding" "At4g25880","No alias","Arabidopsis thaliana","pumilio 6 [Source:TAIR;Acc:AT4G25880]","protein_coding" "At4g26980","No alias","Arabidopsis thaliana","At4g26980 [Source:UniProtKB/TrEMBL;Acc:Q501F5]","protein_coding" "At4g32560","No alias","Arabidopsis thaliana","Paramyosin-like protein [Source:UniProtKB/TrEMBL;Acc:Q94CB2]","protein_coding" "At4g33400","No alias","Arabidopsis thaliana","Dem-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SZB7]","protein_coding" "At4g34450","No alias","Arabidopsis thaliana","Coatomer subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q0WW26]","protein_coding" "At4g34910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW44]","protein_coding" "At5g03430","No alias","Arabidopsis thaliana","Phosphoadenosine phosphosulfate (PAPS) reductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZE4]","protein_coding" "At5g12220","No alias","Arabidopsis thaliana","Las1-like family protein [Source:UniProtKB/TrEMBL;Acc:F4JZH9]","protein_coding" "At5g13590","No alias","Arabidopsis thaliana","unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). [Source:TAIR;Acc:AT5G13590]","protein_coding" "At5g18750","No alias","Arabidopsis thaliana","DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]","protein_coding" "At5g19400","No alias","Arabidopsis thaliana","Protein SMG7 [Source:UniProtKB/Swiss-Prot;Acc:A9QM73]","protein_coding" "At5g37630","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K790]","protein_coding" "At5g38690","No alias","Arabidopsis thaliana","AT5g38690/MBB18_24 [Source:UniProtKB/TrEMBL;Acc:Q8RW95]","protein_coding" "At5g45260","No alias","Arabidopsis thaliana","Disease resistance protein RRS1 [Source:UniProtKB/Swiss-Prot;Acc:P0DKH5]","protein_coding" "At5g46100","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g46100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL2]","protein_coding" "At5g46390","No alias","Arabidopsis thaliana","Carboxyl-terminal-processing peptidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KHG6]","protein_coding" "At5g47010","No alias","Arabidopsis thaliana","Regulator of nonsense transcripts 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FJR0]","protein_coding" "At5g47490","No alias","Arabidopsis thaliana","Protein transport protein SEC16B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK8]","protein_coding" "At5g48450","No alias","Arabidopsis thaliana","SKU5 similar 3 [Source:UniProtKB/TrEMBL;Acc:F4K1P9]","protein_coding" "At5g49880","No alias","Arabidopsis thaliana","Mitotic spindle checkpoint protein MAD1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY1]","protein_coding" "At5g50840","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G50840]","protein_coding" "At5g52280","No alias","Arabidopsis thaliana","At5g52280 [Source:UniProtKB/TrEMBL;Acc:Q9FHD1]","protein_coding" "At5g52410","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - /.../ Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G52410]","protein_coding" "At5g56240","No alias","Arabidopsis thaliana","BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]","protein_coding" "At5g59600","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g59600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR2]","protein_coding" "At5g60040","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL;Acc:F4JXF8]","protein_coding" "At5g60930","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT5G60930]","protein_coding" "At5g61190","No alias","Arabidopsis thaliana","putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain [Source:TAIR;Acc:AT5G61190]","protein_coding" "At5g63710","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G63710]","protein_coding" "At5g63840","No alias","Arabidopsis thaliana","Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]","protein_coding" "At5g63960","No alias","Arabidopsis thaliana","DNA polymerase [Source:UniProtKB/TrEMBL;Acc:F4KC69]","protein_coding" "At5g65900","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB89]","protein_coding" "At5g67100","No alias","Arabidopsis thaliana","DNA polymerase alpha catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA3]","protein_coding" "At5g67270","No alias","Arabidopsis thaliana","EB1C [Source:UniProtKB/TrEMBL;Acc:A0A178UNG3]","protein_coding" "Bradi1g00887","No alias","Brachypodium distachyon","exportin 1A","protein_coding" "Bradi1g10640","No alias","Brachypodium distachyon","Protein of unknown function (DUF760)","protein_coding" "Bradi1g11817","No alias","Brachypodium distachyon","chloride channel D","protein_coding" "Bradi1g15360","No alias","Brachypodium distachyon","DNA-binding protein, putative","protein_coding" "Bradi1g15450","No alias","Brachypodium distachyon","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding" "Bradi1g16460","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g17580","No alias","Brachypodium distachyon","RECQ helicase L2","protein_coding" "Bradi1g19010","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Bradi1g21820","No alias","Brachypodium distachyon","agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein","protein_coding" "Bradi1g23340","No alias","Brachypodium distachyon","WRKY family transcription factor family protein","protein_coding" "Bradi1g24597","No alias","Brachypodium distachyon","HOPM interactor 7","protein_coding" "Bradi1g24630","No alias","Brachypodium distachyon","aminophospholipid ATPase 2","protein_coding" "Bradi1g24720","No alias","Brachypodium distachyon","HSI2-like 1","protein_coding" "Bradi1g26420","No alias","Brachypodium distachyon","DNA-binding bromodomain-containing protein","protein_coding" "Bradi1g26940","No alias","Brachypodium distachyon","chromatin remodeling 4","protein_coding" "Bradi1g29247","No alias","Brachypodium distachyon","transcription factor jumonji (jmjC) domain-containing protein","protein_coding" "Bradi1g29260","No alias","Brachypodium distachyon","endoplasmic reticulum-adenine nucleotide transporter 1","protein_coding" "Bradi1g29410","No alias","Brachypodium distachyon","Transcription elongation factor (TFIIS) family protein","protein_coding" "Bradi1g32300","No alias","Brachypodium distachyon","Nucleotidyltransferase family protein","protein_coding" "Bradi1g33280","No alias","Brachypodium distachyon","O-fucosyltransferase family protein","protein_coding" "Bradi1g33640","No alias","Brachypodium distachyon","S-locus lectin protein kinase family protein","protein_coding" "Bradi1g43440","No alias","Brachypodium distachyon","binding","protein_coding" "Bradi1g46360","No alias","Brachypodium distachyon","Kinase-related protein of unknown function (DUF1296)","protein_coding" "Bradi1g46550","No alias","Brachypodium distachyon","CTC-interacting domain 7","protein_coding" "Bradi1g47367","No alias","Brachypodium distachyon","chromatin remodeling factor CHD3 (PICKLE)","protein_coding" "Bradi1g47407","No alias","Brachypodium distachyon","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "Bradi1g48426","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi1g60450","No alias","Brachypodium distachyon","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "Bradi1g60890","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Bradi1g61000","No alias","Brachypodium distachyon","SAP domain-containing protein","protein_coding" "Bradi1g61220","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding" "Bradi1g62580","No alias","Brachypodium distachyon","CW-type Zinc Finger","protein_coding" "Bradi1g63250","No alias","Brachypodium distachyon","aminophospholipid ATPase 1","protein_coding" "Bradi1g63360","No alias","Brachypodium distachyon","WWE protein-protein interaction domain protein family","protein_coding" "Bradi1g65450","No alias","Brachypodium distachyon","APRATAXIN-like","protein_coding" "Bradi1g71160","No alias","Brachypodium distachyon","Arabinanase/levansucrase/invertase","protein_coding" "Bradi1g71690","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding" "Bradi1g76370","No alias","Brachypodium distachyon","DNA-binding bromodomain-containing protein","protein_coding" "Bradi2g03717","No alias","Brachypodium distachyon","Peptidase family M48 family protein","protein_coding" "Bradi2g04440","No alias","Brachypodium distachyon","asparagine-linked glycosylation 3","protein_coding" "Bradi2g05824","No alias","Brachypodium distachyon","DNA binding","protein_coding" "Bradi2g06260","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi2g09080","No alias","Brachypodium distachyon","TOPLESS-related 2","protein_coding" "Bradi2g14600","No alias","Brachypodium distachyon","Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein","protein_coding" "Bradi2g21970","No alias","Brachypodium distachyon","NOT2 / NOT3 / NOT5 family","protein_coding" "Bradi2g35740","No alias","Brachypodium distachyon","chromatin-remodeling protein 11","protein_coding" "Bradi2g38160","No alias","Brachypodium distachyon","Duplicated homeodomain-like superfamily protein","protein_coding" "Bradi2g46680","No alias","Brachypodium distachyon","GPI transamidase component family protein / Gaa1-like family protein","protein_coding" "Bradi2g48130","No alias","Brachypodium distachyon","Integrase-type DNA-binding superfamily protein","protein_coding" "Bradi2g49860","No alias","Brachypodium distachyon","winged-helix DNA-binding transcription factor family protein","protein_coding" "Bradi2g52955","No alias","Brachypodium distachyon","Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "Bradi2g55497","No alias","Brachypodium distachyon","TBP-associated factor 12","protein_coding" "Bradi2g57657","No alias","Brachypodium distachyon","sister chromatid cohesion 1 protein 4","protein_coding" "Bradi2g61830","No alias","Brachypodium distachyon","Glycosyl hydrolases family 32 protein","protein_coding" "Bradi3g02497","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding" "Bradi3g08260","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi3g09067","No alias","Brachypodium distachyon","GSK3/SHAGGY-like protein kinase 1","protein_coding" "Bradi3g09760","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g12020","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g12880","No alias","Brachypodium distachyon","RNA-binding KH domain-containing protein","protein_coding" "Bradi3g13610","No alias","Brachypodium distachyon","EMBRYO DEFECTIVE 140","protein_coding" "Bradi3g15594","No alias","Brachypodium distachyon","HOPZ-ACTIVATED RESISTANCE 1","protein_coding" "Bradi3g17620","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi3g26800","No alias","Brachypodium distachyon","histone acetyltransferase of the GNAT family 1","protein_coding" "Bradi3g27480","No alias","Brachypodium distachyon","Splicing factor, CC1-like","protein_coding" "Bradi3g28760","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g29870","No alias","Brachypodium distachyon","RNA-binding KH domain-containing protein","protein_coding" "Bradi3g32780","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Bradi3g33240","No alias","Brachypodium distachyon","G2484-1 protein","protein_coding" "Bradi3g35870","No alias","Brachypodium distachyon","splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein","protein_coding" "Bradi3g37350","No alias","Brachypodium distachyon","phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding" "Bradi3g43587","No alias","Brachypodium distachyon","phragmoplast-associated kinesin-related protein 1","protein_coding" "Bradi3g44197","No alias","Brachypodium distachyon","DNA polymerase epsilon catalytic subunit","protein_coding" "Bradi3g49447","No alias","Brachypodium distachyon","ARF-GAP domain 2","protein_coding" "Bradi3g50590","No alias","Brachypodium distachyon","Diacylglycerol kinase family protein","protein_coding" "Bradi3g52480","No alias","Brachypodium distachyon","Tudor/PWWP/MBT superfamily protein","protein_coding" "Bradi3g52690","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Bradi3g52951","No alias","Brachypodium distachyon","nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding","protein_coding" "Bradi3g53047","No alias","Brachypodium distachyon","little nuclei1","protein_coding" "Bradi3g55905","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g59200","No alias","Brachypodium distachyon","Transducin family protein / WD-40 repeat family protein","protein_coding" "Bradi3g60200","No alias","Brachypodium distachyon","Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor","protein_coding" "Bradi4g01790","No alias","Brachypodium distachyon","SET domain protein 25","protein_coding" "Bradi4g03980","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Bradi4g04470","No alias","Brachypodium distachyon","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Bradi4g07950","No alias","Brachypodium distachyon","RING/FYVE/PHD zinc finger superfamily protein","protein_coding" "Bradi4g15010","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g22770","No alias","Brachypodium distachyon","SEUSS transcriptional co-regulator","protein_coding" "Bradi4g23990","No alias","Brachypodium distachyon","transmembrane nine 1","protein_coding" "Bradi4g26227","No alias","Brachypodium distachyon","ENTH/VHS family protein","protein_coding" "Bradi4g26487","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Bradi4g31040","No alias","Brachypodium distachyon","related to AP2 2","protein_coding" "Bradi4g38400","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi4g38470","No alias","Brachypodium distachyon","homolog of histone chaperone HIRA","protein_coding" "Bradi4g40530","No alias","Brachypodium distachyon","Avirulence induced gene (AIG1) family protein","protein_coding" "Bradi4g41970","No alias","Brachypodium distachyon","transcription factor-related","protein_coding" "Bradi4g43510","No alias","Brachypodium distachyon","Aldolase superfamily protein","protein_coding" "Bradi4g45240","No alias","Brachypodium distachyon","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Bradi5g08610","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g10330","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding" "Bradi5g10432","No alias","Brachypodium distachyon","DNA helicase (RECQl4A)","protein_coding" "Bradi5g11141","No alias","Brachypodium distachyon","cysteine-rich RLK (RECEPTOR-like protein kinase) 10","protein_coding" "Bradi5g17340","No alias","Brachypodium distachyon","SU(VAR)3-9 homolog 5","protein_coding" "Bradi5g18610","No alias","Brachypodium distachyon","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding" "Bradi5g19787","No alias","Brachypodium distachyon","multidrug resistance-associated protein 9","protein_coding" "Bradi5g20280","No alias","Brachypodium distachyon","SCAMP family protein","protein_coding" "Bradi5g23027","No alias","Brachypodium distachyon","S-locus lectin protein kinase family protein","protein_coding" "Cre01.g002861","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g003463","No alias","Chlamydomonas reinhardtii","MUTS homolog 2","protein_coding" "Cre01.g012100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g015250","No alias","Chlamydomonas reinhardtii","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding" "Cre01.g017100","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding" "Cre01.g017450","No alias","Chlamydomonas reinhardtii","DNA polymerase alpha 2","protein_coding" "Cre01.g019150","No alias","Chlamydomonas reinhardtii","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding" "Cre01.g019750","No alias","Chlamydomonas reinhardtii","topoisomerase 6 subunit B","protein_coding" "Cre01.g021850","No alias","Chlamydomonas reinhardtii","DEAD/DEAH box RNA helicase family protein","protein_coding" "Cre01.g022000","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g023450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g024400","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Cre01.g029100","No alias","Chlamydomonas reinhardtii","PSF2","protein_coding" "Cre01.g034600","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cre01.g034750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g036050","No alias","Chlamydomonas reinhardtii","MUTL-homologue 1","protein_coding" "Cre01.g038151","No alias","Chlamydomonas reinhardtii","cell division cycle protein 48-related / CDC48-related","protein_coding" "Cre01.g047350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g053250","No alias","Chlamydomonas reinhardtii","RING/FYVE/PHD zinc finger superfamily protein","protein_coding" "Cre01.g054500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g089600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g095050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g095294","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Cre02.g097850","No alias","Chlamydomonas reinhardtii","CCCH-type zinc finger family protein","protein_coding" "Cre02.g100000","No alias","Chlamydomonas reinhardtii","Replication protein A, subunit RPA32","protein_coding" "Cre02.g103350","No alias","Chlamydomonas reinhardtii","fatty acid amide hydrolase","protein_coding" "Cre02.g104951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g119800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g142186","No alias","Chlamydomonas reinhardtii","Tubulin/FtsZ family protein","protein_coding" "Cre02.g142602","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g145687","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding" "Cre03.g158464","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g158550","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor CHD3 (PICKLE)","protein_coding" "Cre03.g162050","No alias","Chlamydomonas reinhardtii","histone deacetylase 15","protein_coding" "Cre03.g162950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g163300","No alias","Chlamydomonas reinhardtii","homolog of yeast CDT1 B homolog of yeast CDT1 B","protein_coding" "Cre03.g163850","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Cre03.g179961","No alias","Chlamydomonas reinhardtii","DNA polymerase epsilon catalytic subunit","protein_coding" "Cre03.g180050","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cre03.g185350","No alias","Chlamydomonas reinhardtii","callose synthase 5","protein_coding" "Cre03.g197300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g197700","No alias","Chlamydomonas reinhardtii","trithorax-like protein 2","protein_coding" "Cre03.g199350","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor18","protein_coding" "Cre03.g200900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g202000","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g202250","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding" "Cre03.g204017","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g213050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g214350","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding" "Cre04.g217944","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g219500","No alias","Chlamydomonas reinhardtii","Heat shock protein DnaJ with tetratricopeptide repeat","protein_coding" "Cre04.g219750","No alias","Chlamydomonas reinhardtii","DNA helicase (RECQl4A)","protein_coding" "Cre04.g220250","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with ABF2","protein_coding" "Cre04.g226001","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g227000","No alias","Chlamydomonas reinhardtii","DNA mismatch repair protein, putative","protein_coding" "Cre04.g233102","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g233350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g235750","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding" "Cre05.g236050","No alias","Chlamydomonas reinhardtii","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Cre05.g236100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g239250","No alias","Chlamydomonas reinhardtii","Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein","protein_coding" "Cre05.g239800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g240100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g243900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g255800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g258200","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre06.g263100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g278173","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g278243","No alias","Chlamydomonas reinhardtii","GTP cyclohydrolase I","protein_coding" "Cre06.g278244","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g286650","No alias","Chlamydomonas reinhardtii","methyltransferase 1","protein_coding" "Cre06.g288100","No alias","Chlamydomonas reinhardtii","mRNAadenosine methylase","protein_coding" "Cre06.g293000","No alias","Chlamydomonas reinhardtii","DNA primase, large subunit family","protein_coding" "Cre06.g294700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g295700","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "Cre06.g303536","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g312350","No alias","Chlamydomonas reinhardtii","DNA primases;DNA primases","protein_coding" "Cre07.g314700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g316850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "Cre07.g325716","No alias","Chlamydomonas reinhardtii","DNA ligase 1","protein_coding" "Cre07.g334650","No alias","Chlamydomonas reinhardtii","breast cancer susceptibility1","protein_coding" "Cre07.g338000","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "Cre07.g344634","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g344702","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g350800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g351400","No alias","Chlamydomonas reinhardtii","minichromosome maintenance 10","protein_coding" "Cre07.g355200","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 5","protein_coding" "Cre07.g357450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g358552","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g368350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g382150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g382750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g383950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g390150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g390430","No alias","Chlamydomonas reinhardtii","SMAD/FHA domain-containing protein","protein_coding" "Cre09.g393600","No alias","Chlamydomonas reinhardtii","DNA replication protein-related","protein_coding" "Cre09.g396475","No alias","Chlamydomonas reinhardtii","RING domain ligase1","protein_coding" "Cre09.g409426","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g418250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g422650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g424200","No alias","Chlamydomonas reinhardtii","DNA polymerase epsilon subunit B2","protein_coding" "Cre10.g426850","No alias","Chlamydomonas reinhardtii","HXXXD-type acyl-transferase family protein","protein_coding" "Cre10.g437300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g440200","No alias","Chlamydomonas reinhardtii","structural maintenance of chromosomes 5","protein_coding" "Cre10.g441700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g448300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g452300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g455600","No alias","Chlamydomonas reinhardtii","origin recognition complex 1","protein_coding" "Cre10.g455800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g455850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "Cre10.g460250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g461750","No alias","Chlamydomonas reinhardtii","methyltransferase 1","protein_coding" "Cre11.g467637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre11.g467745","No alias","Chlamydomonas reinhardtii","spindle pole body component 98","protein_coding" "Cre11.g475650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre11.g482700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding" "Cre12.g497650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g512500","No alias","Chlamydomonas reinhardtii","zinc knuckle (CCHC-type) family protein","protein_coding" "Cre12.g524050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g525500","No alias","Chlamydomonas reinhardtii","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding" "Cre12.g543300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g550000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g555050","No alias","Chlamydomonas reinhardtii","Restriction endonuclease, type II-like superfamily protein","protein_coding" "Cre12.g556653","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g562950","No alias","Chlamydomonas reinhardtii","anaphase promoting complex 6","protein_coding" "Cre13.g570150","No alias","Chlamydomonas reinhardtii","DNA binding","protein_coding" "Cre13.g574000","No alias","Chlamydomonas reinhardtii","chloride channel D","protein_coding" "Cre13.g575300","No alias","Chlamydomonas reinhardtii","Protein kinase family protein with ARM repeat domain","protein_coding" "Cre14.g619850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre15.g635800","No alias","Chlamydomonas reinhardtii","Structural maintenance of chromosomes (SMC) family protein","protein_coding" "Cre15.g641950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g651000","No alias","Chlamydomonas reinhardtii","Replication factor-A protein 1-related","protein_coding" "Cre16.g652950","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding" "Cre16.g667900","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding" "Cre16.g674152","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g676200","No alias","Chlamydomonas reinhardtii","Guanylate-binding family protein","protein_coding" "Cre16.g694800","No alias","Chlamydomonas reinhardtii","Arabidopsis thaliana protein of unknown function (DUF821)","protein_coding" "Cre16.g695350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g701350","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "Cre17.g712450","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF1767)","protein_coding" "Cre17.g719900","No alias","Chlamydomonas reinhardtii","catalytics;carbohydrate kinases;phosphoglucan, water dikinases","protein_coding" "Cre17.g726500","No alias","Chlamydomonas reinhardtii","origin recognition complex subunit 4","protein_coding" "Cre17.g729700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g732802","No alias","Chlamydomonas reinhardtii","fumarylacetoacetase, putative","protein_coding" "Cre17.g733600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g740510","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Cre17.g742700","No alias","Chlamydomonas reinhardtii","SET domain protein 2","protein_coding" "Cre17.g744247","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "evm.model.contig_2015.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2033.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2046.2","No alias","Porphyridium purpureum","(at1g18260 : 107.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2062.8","No alias","Porphyridium purpureum","(at5g19850 : 156.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.contig_2086.5","No alias","Porphyridium purpureum","(at4g38470 : 207.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17801|kpro_maize : 110.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 414.0) & (original description: no original description)","protein_coding" "evm.model.contig_2090.19","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2104.12","No alias","Porphyridium purpureum","(at5g09550 : 417.0) GDP dissociation inhibitor family protein / Rab GTPase activator family protein; FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1326 Blast hits to 1219 proteins in 259 species: Archae - 2; Bacteria - 4; Metazoa - 658; Fungi - 290; Plants - 182; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 834.0) & (original description: no original description)","protein_coding" "evm.model.contig_2104.17","No alias","Porphyridium purpureum","(at3g17940 : 112.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)","protein_coding" "evm.model.contig_2104.7","No alias","Porphyridium purpureum","(at2g43940 : 119.0) HARMLESS TO OZONE LAYER 3 (HOL3); FUNCTIONS IN: methyltransferase activity, thiopurine S-methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Thiopurine S-methyltransferase (InterPro:IPR008854); BEST Arabidopsis thaliana protein match is: HARMLESS TO OZONE LAYER 1 (TAIR:AT2G43910.1); Has 1908 Blast hits to 1904 proteins in 625 species: Archae - 27; Bacteria - 1474; Metazoa - 21; Fungi - 109; Plants - 87; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)","protein_coding" "evm.model.contig_2112.8","No alias","Porphyridium purpureum","(at3g62000 : 138.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61990.1). & (q8h9b6|camt_soltu : 116.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Solanum tuberosum (Potato) & (reliability: 276.0) & (original description: no original description)","protein_coding" "evm.model.contig_2139.17","No alias","Porphyridium purpureum","(at5g52540 : 239.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G24000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 478.0) & (original description: no original description)","protein_coding" "evm.model.contig_2142.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2157.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2157.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2203.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2279.14","No alias","Porphyridium purpureum","(at1g06410 : 434.0) Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.; trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (reliability: 868.0) & (original description: no original description)","protein_coding" "evm.model.contig_2282.16","No alias","Porphyridium purpureum","(at1g10930 : 445.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 858.0) & (original description: no original description)","protein_coding" "evm.model.contig_2341.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2345.3","No alias","Porphyridium purpureum","(at1g13980 : 171.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 342.0) & (original description: no original description)","protein_coding" "evm.model.contig_2504.8","No alias","Porphyridium purpureum","(at4g01100 : 137.0) adenine nucleotide transporter 1 (ADNT1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G51050.1). & (p29518|bt1_maize : 102.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.contig_2521.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3395.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3400.1","No alias","Porphyridium purpureum","(at3g22980 : 493.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (o23755|ef2_betvu : 266.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 986.0) & (original description: no original description)","protein_coding" "evm.model.contig_3412.8","No alias","Porphyridium purpureum","(at5g11560 : 127.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)","protein_coding" "evm.model.contig_3415.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3423.19","No alias","Porphyridium purpureum","(at4g33650 : 318.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (reliability: 636.0) & (original description: no original description)","protein_coding" "evm.model.contig_3453.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3478.14","No alias","Porphyridium purpureum","(at5g57020 : 388.0) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.; myristoyl-CoA:protein N-myristoyltransferase (NMT1); CONTAINS InterPro DOMAIN/s: Myristoyl-CoA:protein N-myristoyltransferase (InterPro:IPR000903), Myristoyl-CoA:protein N-myristoyltransferase, conserved site (InterPro:IPR022678), Myristoyl-CoA:protein N-myristoyltransferase, N-terminal (InterPro:IPR022676), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Myristoyl-CoA:protein N-myristoyltransferase, C-terminal (InterPro:IPR022677); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G44175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 776.0) & (original description: no original description)","protein_coding" "evm.model.contig_3510.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3627.2","No alias","Porphyridium purpureum","(at4g31210 : 301.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), DNA topoisomerase I, bacterial-type (InterPro:IPR005733), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 21441 Blast hits to 18441 proteins in 2923 species: Archae - 440; Bacteria - 10015; Metazoa - 1777; Fungi - 750; Plants - 256; Viruses - 35; Other Eukaryotes - 8168 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description)","protein_coding" "evm.model.contig_3646.3","No alias","Porphyridium purpureum","(at3g52050 : 147.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity; CONTAINS InterPro DOMAIN/s: 5'-3' exonuclease, SAM-fold domain (InterPro:IPR020047), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, N-terminal resolvase-like domain (InterPro:IPR020046), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G34380.2); Has 9778 Blast hits to 9773 proteins in 2548 species: Archae - 3; Bacteria - 6175; Metazoa - 3; Fungi - 2; Plants - 105; Viruses - 32; Other Eukaryotes - 3458 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description)","protein_coding" "evm.model.contig_438.5","No alias","Porphyridium purpureum","(at2g25660 : 96.3) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) & (original description: no original description)","protein_coding" "evm.model.contig_4400.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4409.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4410.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4429.2","No alias","Porphyridium purpureum","(at1g60990 : 97.1) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G11860.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description)","protein_coding" "evm.model.contig_4432.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4432.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_444.20","No alias","Porphyridium purpureum","(at3g20630 : 279.0) Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (reliability: 558.0) & (original description: no original description)","protein_coding" "evm.model.contig_4453.1","No alias","Porphyridium purpureum","(at1g02145 : 145.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "evm.model.contig_4456.5","No alias","Porphyridium purpureum","(at5g16870 : 114.0) Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity; INVOLVED IN: translation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833); BEST Arabidopsis thaliana protein match is: Peptidyl-tRNA hydrolase II (PTH2) family protein (TAIR:AT3G03010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "evm.model.contig_4476.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4480.2","No alias","Porphyridium purpureum","(at2g37670 : 106.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_4525.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_455.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_458.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_462.1","No alias","Porphyridium purpureum","(at2g17510 : 372.0) EMBRYO DEFECTIVE 2763 (EMB2763); FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide binding protein, PINc (InterPro:IPR006596), Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: Ribonuclease II/R family protein (TAIR:AT1G77680.1). & (reliability: 744.0) & (original description: no original description)","protein_coding" "evm.model.contig_479.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_497.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_498.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_506.3","No alias","Porphyridium purpureum","(at1g54350 : 362.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 724.0) & (original description: no original description)","protein_coding" "evm.model.contig_506.7","No alias","Porphyridium purpureum","(at5g27920 : 102.0) F-box family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G01720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_524.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_530.2","No alias","Porphyridium purpureum","(at1g45110 : 137.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site (InterPro:IPR018063), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Uncharacterised protein family UPF0011 (InterPro:IPR008189); Has 8880 Blast hits to 8878 proteins in 2458 species: Archae - 59; Bacteria - 5736; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 2997 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.contig_531.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_540.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_545.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_552.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_558.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_559.6","No alias","Porphyridium purpureum","(q02879|tbp2_wheat : 263.0) TATA-box-binding protein 2 (TATA-box factor 2) (TATA-binding factor 2) (TATA sequence-binding protein 2) (TBP-2) (Transcription initiation factor TFIID TBP-2 subunit) - Triticum aestivum (Wheat) & (at3g13445 : 254.0) TBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex; TATA binding protein 1 (TBP1); FUNCTIONS IN: RNA polymerase II transcription factor activity, binding, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 2 (TAIR:AT1G55520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 508.0) & (original description: no original description)","protein_coding" "evm.model.contig_655.2","No alias","Porphyridium purpureum","(at4g27690 : 243.0) vacuolar protein sorting 26B (VPS26B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; LOCATED IN: retromer complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)","protein_coding" "evm.model.contig_703.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_718.2","No alias","Porphyridium purpureum","(at5g39940 : 291.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792). & (reliability: 582.0) & (original description: no original description)","protein_coding" "evm.model.contig_798.1","No alias","Porphyridium purpureum","(at1g50030 : 714.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 170.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1428.0) & (original description: no original description)","protein_coding" "evm.model.tig00000042.231","No alias","Cyanophora paradoxa","(o81263|kith_orysa : 138.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 136.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00000139.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000142.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000147.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.106","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.97","No alias","Cyanophora paradoxa","(at5g06680 : 125.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)","protein_coding" "evm.model.tig00000215.102","No alias","Cyanophora paradoxa","(at5g13840 : 103.0) FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1). & (reliability: 187.2) & (original description: no original description)","protein_coding" "evm.model.tig00000241.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000403.40","No alias","Cyanophora paradoxa","(at1g29630 : 229.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "evm.model.tig00000405.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000480.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000489.16","No alias","Cyanophora paradoxa","(at4g02070 : 188.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 111.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 376.0) & (original description: no original description)","protein_coding" "evm.model.tig00000523.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000545.28","No alias","Cyanophora paradoxa","(at5g17410 : 387.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 774.0) & (original description: no original description)","protein_coding" "evm.model.tig00000692.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000692.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000704.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000754.31","No alias","Cyanophora paradoxa","(at1g08130 : 306.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 80.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: no original description)","protein_coding" "evm.model.tig00000789.15","No alias","Cyanophora paradoxa","(at4g32700 : 299.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)","protein_coding" "evm.model.tig00000849.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000852.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000865.33","No alias","Cyanophora paradoxa","(p25387|gblp_chlre : 151.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (at3g49660 : 140.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)","protein_coding" "evm.model.tig00000880.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000900.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000903.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000903.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000989.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001030.24","No alias","Cyanophora paradoxa","(at5g19820 : 80.1) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)","protein_coding" "evm.model.tig00001056.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001073.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001107.10","No alias","Cyanophora paradoxa","(at1g67630 : 106.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "evm.model.tig00001154.43","No alias","Cyanophora paradoxa","(at5g52910 : 104.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.tig00001265.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001299.12","No alias","Cyanophora paradoxa","(at4g31400 : 91.7) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description)","protein_coding" "evm.model.tig00001331.9","No alias","Cyanophora paradoxa","(at1g02970 : 220.0) Protein kinase that negatively regulates the entry into mitosis.; WEE1 kinase homolog (WEE1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2); Has 100256 Blast hits to 98965 proteins in 4396 species: Archae - 165; Bacteria - 12308; Metazoa - 39873; Fungi - 10996; Plants - 18240; Viruses - 408; Other Eukaryotes - 18266 (source: NCBI BLink). & (q6ret6|ccamk_pea : 107.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (EC 2.7.11.17) (PsCCaMK) (Ps-SYM9) (Fragment) - Pisum sativum (Garden pea) & (reliability: 440.0) & (original description: no original description)","protein_coding" "evm.model.tig00001374.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001374.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001497.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001574.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001636.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.14","No alias","Cyanophora paradoxa","(at1g04020 : 90.1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 180.2) & (original description: no original description)","protein_coding" "evm.model.tig00020537.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020538.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.193","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.80","No alias","Cyanophora paradoxa","(at1g08600 : 177.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 110.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.tig00020563.149","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020603.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020616.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.12","No alias","Cyanophora paradoxa","(at5g64630 : 142.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.tig00020675.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020685.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020710.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020723.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020800.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020902.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020903.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020909.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020911.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.145","No alias","Cyanophora paradoxa","(at4g15890 : 81.3) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 162.6) & (original description: no original description)","protein_coding" "evm.model.tig00020961.28","No alias","Cyanophora paradoxa","(at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) & (original description: no original description)","protein_coding" "evm.model.tig00020961.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020995.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021035.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021036.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021036.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021072.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021127.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021135.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021137.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021181.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021254.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021318.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.12","No alias","Cyanophora paradoxa","(at2g20000 : 287.0) Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.; HOBBIT (HBT); FUNCTIONS IN: binding; INVOLVED IN: in 10 processes; LOCATED IN: anaphase-promoting complex, nucleus, cell plate, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 19127 Blast hits to 10740 proteins in 1344 species: Archae - 1126; Bacteria - 9300; Metazoa - 1888; Fungi - 782; Plants - 572; Viruses - 0; Other Eukaryotes - 5459 (source: NCBI BLink). & (reliability: 574.0) & (original description: no original description)","protein_coding" "evm.model.tig00021434.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021435.12","No alias","Cyanophora paradoxa","(at5g27410 : 88.6) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). & (reliability: 177.2) & (original description: no original description)","protein_coding" "evm.model.tig00021489.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021616.10","No alias","Cyanophora paradoxa","(at4g25540 : 375.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).; homolog of DNA mismatch repair protein MSH3 (MSH3); CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153; Bacteria - 9793; Metazoa - 705; Fungi - 864; Plants - 451; Viruses - 3; Other Eukaryotes - 2578 (source: NCBI BLink). & (q9xgc9|msh2_maize : 143.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 750.0) & (original description: no original description)","protein_coding" "evm.model.tig00021617.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021621.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021719.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021719.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021742.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00022104.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "Glyma.01G006400","No alias","Glycine max","Arginyl-tRNA synthetase, class Ic","protein_coding" "Glyma.01G011100","No alias","Glycine max","Proteasome component (PCI) domain protein","protein_coding" "Glyma.01G032500","No alias","Glycine max","Threonyl-tRNA synthetase","protein_coding" "Glyma.01G039700","No alias","Glycine max","Vps51/Vps67 family (components of vesicular transport) protein","protein_coding" "Glyma.01G081100","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding" "Glyma.01G140200","No alias","Glycine max","arginase","protein_coding" "Glyma.01G164100","No alias","Glycine max","VPS35 homolog A","protein_coding" "Glyma.01G189200","No alias","Glycine max","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding" "Glyma.01G209800","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Glyma.01G213400","No alias","Glycine max","Sodium Bile acid symporter family","protein_coding" "Glyma.01G230700","No alias","Glycine max","KH domain-containing protein","protein_coding" "Glyma.01G234200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G244700","No alias","Glycine max","homolog of RAD54","protein_coding" "Glyma.02G012900","No alias","Glycine max","WD40/YVTN repeat-like-containing domain;Bromodomain","protein_coding" "Glyma.02G056600","No alias","Glycine max","GATA type zinc finger transcription factor family protein","protein_coding" "Glyma.02G074500","No alias","Glycine max","forkhead-associated (FHA) domain-containing protein","protein_coding" "Glyma.02G077000","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding" "Glyma.02G109200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.02G114000","No alias","Glycine max","Ribosomal RNA processing Brix domain protein","protein_coding" "Glyma.02G118800","No alias","Glycine max","cell division cycle 48B","protein_coding" "Glyma.02G127700","No alias","Glycine max","F-box/RNI-like superfamily protein","protein_coding" "Glyma.02G152400","No alias","Glycine max","DEGP protease 2","protein_coding" "Glyma.02G162700","No alias","Glycine max","purple acid phosphatase 29","protein_coding" "Glyma.02G261700","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding" "Glyma.02G278500","No alias","Glycine max","las1-like family protein","protein_coding" "Glyma.02G295100","No alias","Glycine max","microtubule-associated proteins 65-1","protein_coding" "Glyma.02G299400","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Glyma.02G305000","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Glyma.02G309100","No alias","Glycine max","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.03G028000","No alias","Glycine max","Arginase/deacetylase superfamily protein","protein_coding" "Glyma.03G029900","No alias","Glycine max","cytochrome P450, family 71, subfamily B, polypeptide 36","protein_coding" "Glyma.03G050300","No alias","Glycine max","Ribosomal protein S4 (RPS4A) family protein","protein_coding" "Glyma.03G070600","No alias","Glycine max","isochorismate synthase 2","protein_coding" "Glyma.03G100800","No alias","Glycine max","Phosphoribosyltransferase family protein","protein_coding" "Glyma.03G131100","No alias","Glycine max","sulfoquinovosyldiacylglycerol 1","protein_coding" "Glyma.03G232200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G234900","No alias","Glycine max","pescadillo-related","protein_coding" "Glyma.04G026100","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family protein","protein_coding" "Glyma.04G041400","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding" "Glyma.04G061000","No alias","Glycine max","nuclear RNA polymerase D2A","protein_coding" "Glyma.04G073700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G088100","No alias","Glycine max","RNA-binding KH domain-containing protein","protein_coding" "Glyma.04G090400","No alias","Glycine max","oxidoreductase, zinc-binding dehydrogenase family protein","protein_coding" "Glyma.04G145400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.04G228300","No alias","Glycine max","pseudo-response regulator 5","protein_coding" "Glyma.05G051800","No alias","Glycine max","copper ion binding","protein_coding" "Glyma.05G137400","No alias","Glycine max","ZIP metal ion transporter family","protein_coding" "Glyma.05G139400","No alias","Glycine max","Ribosomal protein S24/S35, mitochondrial","protein_coding" "Glyma.05G165500","No alias","Glycine max","T-complex protein 1 alpha subunit","protein_coding" "Glyma.05G176600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.05G195600","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding" "Glyma.05G221700","No alias","Glycine max","phosphorylethanolamine cytidylyltransferase 1","protein_coding" "Glyma.06G054800","No alias","Glycine max","Mitochondrial substrate carrier family protein","protein_coding" "Glyma.06G058300","No alias","Glycine max","sterile alpha motif (SAM) domain-containing protein","protein_coding" "Glyma.06G062300","No alias","Glycine max","TBP-associated factor 5","protein_coding" "Glyma.06G069200","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding" "Glyma.06G070600","No alias","Glycine max","RAN GTPase 3","protein_coding" "Glyma.06G092300","No alias","Glycine max","CBL-interacting protein kinase 8","protein_coding" "Glyma.06G120200","No alias","Glycine max","SWITCH/sucrose nonfermenting 3A","protein_coding" "Glyma.06G128600","No alias","Glycine max","prolyl oligopeptidase family protein","protein_coding" "Glyma.06G132300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G144100","No alias","Glycine max","Melibiase family protein","protein_coding" "Glyma.06G160100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.06G172400","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding" "Glyma.06G221600","No alias","Glycine max","Reticulon family protein","protein_coding" "Glyma.06G276200","No alias","Glycine max","multiprotein bridging factor 1B","protein_coding" "Glyma.06G296200","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding" "Glyma.07G019000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.07G034700","No alias","Glycine max","Coatomer, beta\' subunit","protein_coding" "Glyma.07G034800","No alias","Glycine max","lipoxygenase 1","protein_coding" "Glyma.07G040600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G060300","No alias","Glycine max","Dihydrodipicolinate reductase, bacterial/plant","protein_coding" "Glyma.07G107800","No alias","Glycine max","3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2","protein_coding" "Glyma.07G118700","No alias","Glycine max","methyl-CPG-binding domain 7","protein_coding" "Glyma.07G123900","No alias","Glycine max","Protein of unknown function (DUF3550/UPF0682)","protein_coding" "Glyma.07G138800","No alias","Glycine max","Protein of unknown function, DUF617","protein_coding" "Glyma.07G142000","No alias","Glycine max","Arabidopsis Inositol phosphorylceramide synthase 1","protein_coding" "Glyma.07G152700","No alias","Glycine max","metallopeptidase M24 family protein","protein_coding" "Glyma.07G208600","No alias","Glycine max","Phox-associated domain;Phox-like;Sorting nexin, C-terminal","protein_coding" "Glyma.07G269100","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding" "Glyma.08G053100","No alias","Glycine max","ATP binding;nucleic acid binding;helicases","protein_coding" "Glyma.08G067400","No alias","Glycine max","RNA-binding KH domain-containing protein","protein_coding" "Glyma.08G084800","No alias","Glycine max","urease accessory protein G","protein_coding" "Glyma.08G088900","No alias","Glycine max","Y-family DNA polymerase H","protein_coding" "Glyma.08G104700","No alias","Glycine max","Transducin family protein / WD-40 repeat family protein","protein_coding" "Glyma.08G122600","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "Glyma.08G176400","No alias","Glycine max","CTC-interacting domain 9","protein_coding" "Glyma.08G176900","No alias","Glycine max","homologue of NAP57","protein_coding" "Glyma.08G188100","No alias","Glycine max","DNA helicase (RECQl4A)","protein_coding" "Glyma.08G188700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G298400","No alias","Glycine max","Homeobox-leucine zipper protein family","protein_coding" "Glyma.08G315400","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.08G335300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.09G007600","No alias","Glycine max","plant UBX domain containing protein 4","protein_coding" "Glyma.09G024600","No alias","Glycine max","myosin heavy chain-related","protein_coding" "Glyma.09G029000","No alias","Glycine max","Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein","protein_coding" "Glyma.09G067200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G114000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G158200","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding" "Glyma.09G210300","No alias","Glycine max","protein dimerizations","protein_coding" "Glyma.09G215200","No alias","Glycine max","RECQ helicase L2","protein_coding" "Glyma.09G225000","No alias","Glycine max","purple acid phosphatase 27","protein_coding" "Glyma.09G229500","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "Glyma.10G017700","No alias","Glycine max","poly(ADP-ribose) polymerase","protein_coding" "Glyma.10G071500","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.10G106600","No alias","Glycine max","Glycosyl hydrolase family protein","protein_coding" "Glyma.10G164800","No alias","Glycine max","FtsH extracellular protease family","protein_coding" "Glyma.10G166800","No alias","Glycine max","RNA-binding ASCH domain protein","protein_coding" "Glyma.10G210300","No alias","Glycine max","Ribophorin I","protein_coding" "Glyma.10G215100","No alias","Glycine max","forkhead-associated (FHA) domain-containing protein","protein_coding" "Glyma.10G272200","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding" "Glyma.10G296200","No alias","Glycine max","TGACG motif-binding factor 6","protein_coding" "Glyma.11G018600","No alias","Glycine max","crooked neck protein, putative / cell cycle protein, putative","protein_coding" "Glyma.11G028100","No alias","Glycine max","Cell cycle regulated microtubule associated protein","protein_coding" "Glyma.11G032700","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding" "Glyma.11G036633","No alias","Glycine max","receptor-like protein kinase 1","protein_coding" "Glyma.11G036700","No alias","Glycine max","receptor-like protein kinase 1","protein_coding" "Glyma.11G054100","No alias","Glycine max","SET domain-containing protein","protein_coding" "Glyma.11G073800","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding" "Glyma.11G094300","No alias","Glycine max","tRNA synthetase class I (I, L, M and V) family protein","protein_coding" "Glyma.11G101500","No alias","Glycine max","nucleolin like 2","protein_coding" "Glyma.11G102200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G104500","No alias","Glycine max","ARF-GAP domain 2","protein_coding" "Glyma.11G114300","No alias","Glycine max","NOP56-like pre RNA processing ribonucleoprotein","protein_coding" "Glyma.11G116800","No alias","Glycine max","FtsJ-like methyltransferase family protein","protein_coding" "Glyma.11G120300","No alias","Glycine max","dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein","protein_coding" "Glyma.11G201900","No alias","Glycine max","RECQ helicase SIM","protein_coding" "Glyma.11G240200","No alias","Glycine max","asparagine synthetase 3","protein_coding" "Glyma.12G005400","No alias","Glycine max","Proteasome component (PCI) domain protein","protein_coding" "Glyma.12G007900","No alias","Glycine max","PHD finger family protein","protein_coding" "Glyma.12G020700","No alias","Glycine max","tRNA synthetase class I (I, L, M and V) family protein","protein_coding" "Glyma.12G027400","No alias","Glycine max","nucleolin like 2","protein_coding" "Glyma.12G027700","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Glyma.12G040200","No alias","Glycine max","NOP56-like pre RNA processing ribonucleoprotein","protein_coding" "Glyma.12G070100","No alias","Glycine max","binding","protein_coding" "Glyma.12G086700","No alias","Glycine max","histone deacetylase 9","protein_coding" "Glyma.12G119800","No alias","Glycine max","MAK16 protein-related","protein_coding" "Glyma.12G147900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.12G151100","No alias","Glycine max","SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein","protein_coding" "Glyma.12G167800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.12G170000","No alias","Glycine max","DNA helicase (RECQl4A)","protein_coding" "Glyma.12G219400","No alias","Glycine max","myosin 2","protein_coding" "Glyma.12G223200","No alias","Glycine max","Plasma-membrane choline transporter family protein","protein_coding" "Glyma.12G230900","No alias","Glycine max","SecY protein transport family protein","protein_coding" "Glyma.13G057600","No alias","Glycine max","TPX2 (targeting protein for Xklp2) protein family","protein_coding" "Glyma.13G078900","No alias","Glycine max","C-8,7 sterol isomerase","protein_coding" "Glyma.13G112900","No alias","Glycine max","ARM repeat superfamily protein","protein_coding" "Glyma.13G130100","No alias","Glycine max","phytochrome interacting factor 3-like 5","protein_coding" "Glyma.13G148600","No alias","Glycine max","L-O-methylthreonine resistant 1","protein_coding" "Glyma.13G164900","No alias","Glycine max","chlororespiratory reduction 6","protein_coding" "Glyma.13G208900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G232900","No alias","Glycine max","RNA helicase family protein","protein_coding" "Glyma.14G005900","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.14G014300","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Glyma.14G018300","No alias","Glycine max","microtubule-associated proteins 65-1","protein_coding" "Glyma.14G058400","No alias","Glycine max","E3 ubiquitin ligase, putative","protein_coding" "Glyma.14G222900","No alias","Glycine max","Pseudouridine synthase family protein","protein_coding" "Glyma.15G090300","No alias","Glycine max","serine carboxypeptidase-like 19","protein_coding" "Glyma.15G157800","No alias","Glycine max","pigment defective 320","protein_coding" "Glyma.15G170700","No alias","Glycine max","nucleosome assembly protein 1;2","protein_coding" "Glyma.15G181250","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.15G195100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G207200","No alias","Glycine max","acyl-activating enzyme 17","protein_coding" "Glyma.16G005600","No alias","Glycine max","transcription coactivators","protein_coding" "Glyma.16G046900","No alias","Glycine max","histidine biosynthesis bifunctional protein (HISIE)","protein_coding" "Glyma.16G048100","No alias","Glycine max","Glycosyl hydrolase family 38 protein","protein_coding" "Glyma.16G089300","No alias","Glycine max","GTP cyclohydrolase I","protein_coding" "Glyma.16G096200","No alias","Glycine max","lipoxygenase 1","protein_coding" "Glyma.16G116600","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Glyma.16G179600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.16G213300","No alias","Glycine max","staurosporin and temperature sensitive 3-like b","protein_coding" "Glyma.17G009700","No alias","Glycine max","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Glyma.17G016200","No alias","Glycine max","pfkB-like carbohydrate kinase family protein","protein_coding" "Glyma.17G024200","No alias","Glycine max","tonneau 2 (TON2)","protein_coding" "Glyma.17G037100","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding" "Glyma.17G062200","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.17G082700","No alias","Glycine max","signal peptide peptidase","protein_coding" "Glyma.17G089100","No alias","Glycine max","Transducin family protein / WD-40 repeat family protein","protein_coding" "Glyma.17G093600","No alias","Glycine max","DP-E2F-like 1","protein_coding" "Glyma.17G121600","No alias","Glycine max","TBP-associated factor 2","protein_coding" "Glyma.17G125600","No alias","Glycine max","proline transporter 1","protein_coding" "Glyma.17G201700","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding" "Glyma.17G232700","No alias","Glycine max","growth-regulating factor 1","protein_coding" "Glyma.17G255200","No alias","Glycine max","glycine-rich protein","protein_coding" "Glyma.18G048900","No alias","Glycine max","RECQ helicase SIM","protein_coding" "Glyma.18G087800","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding" "Glyma.18G220400","No alias","Glycine max","DHHC-type zinc finger family protein","protein_coding" "Glyma.18G279000","No alias","Glycine max","Integral membrane HRF1 family protein","protein_coding" "Glyma.19G063300","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.19G069000","No alias","Glycine max","hAT transposon superfamily","protein_coding" "Glyma.19G153400","No alias","Glycine max","BTB-POZ and MATH domain 2","protein_coding" "Glyma.19G154800","No alias","Glycine max","F-box family protein","protein_coding" "Glyma.19G166800","No alias","Glycine max","phospholipid sterol acyl transferase 1","protein_coding" "Glyma.19G187900","No alias","Glycine max","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain","protein_coding" "Glyma.19G194800","No alias","Glycine max","Tubulin/FtsZ family protein","protein_coding" "Glyma.19G209800","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding" "Glyma.19G232500","No alias","Glycine max","pescadillo-related","protein_coding" "Glyma.19G243400","No alias","Glycine max","Pseudouridine synthase family protein","protein_coding" "Glyma.20G070700","No alias","Glycine max","calcium dependent protein kinase 1","protein_coding" "Glyma.20G083600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G151300","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding" "Glyma.20G167151","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G170100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G195000","No alias","Glycine max","5\'-nucleotidases;magnesium ion binding","protein_coding" "Glyma.20G210600","No alias","Glycine max","Protein of unknown function (DUF2361)","protein_coding" "Glyma.20G222100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G248800","No alias","Glycine max","KU70 homolog","protein_coding" "GRMZM2G025227","No alias","Zea mays","Domain of unknown function (DUF543)","protein_coding" "GRMZM2G030902","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "GRMZM2G043183","No alias","Zea mays","Vps52 / Sac2 family","protein_coding" "GRMZM2G044368","No alias","Zea mays","RAB GTPase homolog G3F","protein_coding" "GRMZM2G053720","No alias","Zea mays","Methylenetetrahydrofolate reductase family protein","protein_coding" "GRMZM2G097275","No alias","Zea mays","squamosa promoter binding protein-like 2","protein_coding" "GRMZM2G100838","No alias","Zea mays","DegP protease 1","protein_coding" "GRMZM2G106732","No alias","Zea mays","RECQ helicase L4B","protein_coding" "GRMZM2G113866","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding" "GRMZM2G145396","No alias","Zea mays","Protein of unknown function (DUF1138)","protein_coding" "GRMZM2G159307","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G169160","No alias","Zea mays","Seryl-tRNA synthetase","protein_coding" "GRMZM2G311051","No alias","Zea mays","yeast YAK1-related gene 1","protein_coding" "GRMZM2G330751","No alias","Zea mays","S-locus lectin protein kinase family protein","protein_coding" "GRMZM2G351074","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "GRMZM2G433137","No alias","Zea mays","Protein of unknown function (DUF567)","protein_coding" "GRMZM5G803063","No alias","Zea mays","Function unknown","protein_coding" "Kfl00001_0690","kfl00001_0690_v1.1","Klebsormidium nitens","(at5g62410 : 1028.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (reliability: 2056.0) & (original description: no original description)","protein_coding" "Kfl00001_0700","kfl00001_0700_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00003_0170","kfl00003_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00004_0070","kfl00004_0070_v1.1","Klebsormidium nitens","(at3g19180 : 127.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)","protein_coding" "Kfl00005_0580","kfl00005_0580_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00006_0490","kfl00006_0490_v1.1","Klebsormidium nitens","(at1g79350 : 335.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "Kfl00007_0060","kfl00007_0060_v1.1","Klebsormidium nitens","(at5g01630 : 307.0) Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.; BRCA2-like B (BRCA2B); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: meiosis; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA recombination/repair protein BRCA2, helical domain (InterPro:IPR015252), DNA recombination and repair protein, BRCA2 (InterPro:IPR011370), BRCA2, oligonucleotide/oligosaccharide-binding 1 (InterPro:IPR015187), Breast cancer type 2 susceptibility protein (InterPro:IPR015525), BRCA2 repeat (InterPro:IPR002093); BEST Arabidopsis thaliana protein match is: BREAST CANCER 2 like 2A (TAIR:AT4G00020.1); Has 281 Blast hits to 210 proteins in 91 species: Archae - 0; Bacteria - 4; Metazoa - 134; Fungi - 18; Plants - 61; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description)","protein_coding" "Kfl00007_0070","kfl00007_0070_v1.1","Klebsormidium nitens","(at1g59600 : 87.0) ZCW7; Has 136 Blast hits to 136 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "Kfl00010_0300","kfl00010_0300_v1.1","Klebsormidium nitens","(at3g14740 : 171.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)","protein_coding" "Kfl00013_0430","kfl00013_0430_v1.1","Klebsormidium nitens","(at1g18090 : 256.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)","protein_coding" "Kfl00014_0390","kfl00014_0390_v1.1","Klebsormidium nitens","(at4g20325 : 186.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)","protein_coding" "Kfl00017_0130","kfl00017_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00020_0210","kfl00020_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00020_0220","kfl00020_0220_v1.1","Klebsormidium nitens","(at3g54750 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 392.0) & (original description: no original description)","protein_coding" "Kfl00023_0330","kfl00023_0330_v1.1","Klebsormidium nitens","(at2g20635 : 307.0) ATP binding;protein kinases;protein serine/threonine kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Mad3/BUB1 homology region 1 (InterPro:IPR013212), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.1); Has 7386 Blast hits to 7115 proteins in 591 species: Archae - 30; Bacteria - 832; Metazoa - 2305; Fungi - 1186; Plants - 1328; Viruses - 3; Other Eukaryotes - 1702 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description)","protein_coding" "Kfl00024_0350","kfl00024_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00024_0510","kfl00024_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00025_0110","kfl00025_0110_v1.1","Klebsormidium nitens","(at3g52155 : 141.0) Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); Has 1391 Blast hits to 1391 proteins in 390 species: Archae - 1; Bacteria - 792; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description)","protein_coding" "Kfl00026_0270","kfl00026_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00028_0370","kfl00028_0370_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00028_g56","kfl00028_g56_v1.1","Klebsormidium nitens","(at2g27960 : 105.0) catalytic subunit of cyclin dependent kinase 1. physically interact with cyclin-dependent kinases (CDKs) and play an essential, but yet not entirely resolved, role in the regulation of the cell cycle; cyclin-dependent kinase-subunit 1 (CKS1); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: CDK-subunit 2 (TAIR:AT2G27970.1); Has 657 Blast hits to 657 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 139; Plants - 105; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "Kfl00029_0090","kfl00029_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00031_0310","kfl00031_0310_v1.1","Klebsormidium nitens","(at2g05210 : 102.0) Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.; Protection of Telomeres 1a (AtPOT1a); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Telomere end binding protein (InterPro:IPR011564); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "Kfl00036_0240","kfl00036_0240_v1.1","Klebsormidium nitens","(at4g08900 : 92.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 84.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (reliability: 184.0) & (original description: no original description)","protein_coding" "Kfl00038_0260","kfl00038_0260_v1.1","Klebsormidium nitens","(q9lre6|dpod1_orysa : 1360.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1356.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 2712.0) & (original description: no original description)","protein_coding" "Kfl00038_0385","kfl00038_0385_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00039_0170","kfl00039_0170_v1.1","Klebsormidium nitens","(at2g32590 : 335.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "Kfl00040_0260","kfl00040_0260_v1.1","Klebsormidium nitens","(at2g45490 : 181.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells.; ataurora3 (AUR3); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 132422 Blast hits to 130217 proteins in 4585 species: Archae - 167; Bacteria - 15261; Metazoa - 49222; Fungi - 13102; Plants - 32389; Viruses - 552; Other Eukaryotes - 21729 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 166.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 342.0) & (original description: no original description)","protein_coding" "Kfl00044_0340","kfl00044_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00050_0180","kfl00050_0180_v1.1","Klebsormidium nitens","(at1g27880 : 512.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 1024.0) & (original description: no original description)","protein_coding" "Kfl00052_0340","kfl00052_0340_v1.1","Klebsormidium nitens","(at5g22110 : 456.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 912.0) & (original description: no original description)","protein_coding" "Kfl00053_0050","kfl00053_0050_v1.1","Klebsormidium nitens","(p08437|h3_volca : 147.0) Histone H3 - Volvox carteri & (at5g10980 : 146.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "Kfl00054_0235","kfl00054_0235_v1.1","Klebsormidium nitens","(at5g42480 : 110.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "Kfl00055_0170","kfl00055_0170_v1.1","Klebsormidium nitens","(at3g57060 : 412.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (reliability: 824.0) & (original description: no original description)","protein_coding" "Kfl00057_0090","kfl00057_0090_v1.1","Klebsormidium nitens","(at2g22140 : 132.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "Kfl00058_g44","kfl00058_g44_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00061_0280","kfl00061_0280_v1.1","Klebsormidium nitens","(at1g08260 : 1660.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 3320.0) & (original description: no original description)","protein_coding" "Kfl00066_0210","kfl00066_0210_v1.1","Klebsormidium nitens","(at4g22970 : 243.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (reliability: 486.0) & (original description: no original description)","protein_coding" "Kfl00066_0260","kfl00066_0260_v1.1","Klebsormidium nitens","(at5g15920 : 686.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1372.0) & (original description: no original description)","protein_coding" "Kfl00066_0340","kfl00066_0340_v1.1","Klebsormidium nitens","(at3g42660 : 451.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (reliability: 902.0) & (original description: no original description)","protein_coding" "Kfl00069_0130","kfl00069_0130_v1.1","Klebsormidium nitens","(at5g22010 : 421.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 842.0) & (original description: no original description)","protein_coding" "Kfl00072_0060","kfl00072_0060_v1.1","Klebsormidium nitens","(at1g57820 : 631.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1262.0) & (original description: no original description)","protein_coding" "Kfl00075_0310","kfl00075_0310_v1.1","Klebsormidium nitens","(p22177|pcna_soybn : 320.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) (Fragment) - Glycine max (Soybean) & (at2g29570 : 314.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 628.0) & (original description: no original description)","protein_coding" "Kfl00075_0320","kfl00075_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00080_0200","kfl00080_0200_v1.1","Klebsormidium nitens","(at1g70210 : 131.0) Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)","protein_coding" "Kfl00083_0330","kfl00083_0330_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00086_0370","kfl00086_0370_v1.1","Klebsormidium nitens","(at3g05740 : 520.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (reliability: 1040.0) & (original description: no original description)","protein_coding" "Kfl00094_0200","kfl00094_0200_v1.1","Klebsormidium nitens","(at5g52910 : 319.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)","protein_coding" "Kfl00100_0250","kfl00100_0250_v1.1","Klebsormidium nitens","(at1g67320 : 534.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 1068.0) & (original description: no original description)","protein_coding" "Kfl00102_0020","kfl00102_0020_v1.1","Klebsormidium nitens","(at1g74150 : 104.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 11763 Blast hits to 5823 proteins in 445 species: Archae - 10; Bacteria - 555; Metazoa - 4461; Fungi - 1268; Plants - 2654; Viruses - 19; Other Eukaryotes - 2796 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "Kfl00104_0270","kfl00104_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00108_0080","kfl00108_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00108_0130","kfl00108_0130_v1.1","Klebsormidium nitens","(q8lpu5|cmt3_maize : 469.0) DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (Chromomethylase 3) (DNA methyltransferase 105) - Zea mays (Maize) & (at4g19020 : 419.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description)","protein_coding" "Kfl00109_0040","kfl00109_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00109_0210","kfl00109_0210_v1.1","Klebsormidium nitens","(at5g64630 : 397.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93107|pf20_chlre : 84.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 794.0) & (original description: no original description)","protein_coding" "Kfl00110_0030","kfl00110_0030_v1.1","Klebsormidium nitens","(at3g27640 : 283.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 36714 Blast hits to 22017 proteins in 645 species: Archae - 42; Bacteria - 5151; Metazoa - 14249; Fungi - 8186; Plants - 4562; Viruses - 0; Other Eukaryotes - 4524 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description)","protein_coding" "Kfl00110_0200","kfl00110_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00111_0070","kfl00111_0070_v1.1","Klebsormidium nitens","(at1g02970 : 270.0) Protein kinase that negatively regulates the entry into mitosis.; WEE1 kinase homolog (WEE1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2); Has 100256 Blast hits to 98965 proteins in 4396 species: Archae - 165; Bacteria - 12308; Metazoa - 39873; Fungi - 10996; Plants - 18240; Viruses - 408; Other Eukaryotes - 18266 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 92.8) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 540.0) & (original description: no original description)","protein_coding" "Kfl00112_0010","kfl00112_0010_v1.1","Klebsormidium nitens","(at1g64960 : 375.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) & (original description: no original description)","protein_coding" "Kfl00113_0300","kfl00113_0300_v1.1","Klebsormidium nitens","(at4g29170 : 166.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)","protein_coding" "Kfl00114_0100","kfl00114_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00114_0110","kfl00114_0110_v1.1","Klebsormidium nitens","(p17070|pcna_orysa : 408.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Oryza sativa (Rice) & (at1g07370 : 400.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 800.0) & (original description: no original description)","protein_coding" "Kfl00116_0090","kfl00116_0090_v1.1","Klebsormidium nitens","(at1g04020 : 184.0) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)","protein_coding" "Kfl00117_0050","kfl00117_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00117_0160","kfl00117_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00125_0020","kfl00125_0020_v1.1","Klebsormidium nitens","(at2g13370 : 403.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 384.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 776.0) & (original description: no original description)","protein_coding" "Kfl00128_0250","kfl00128_0250_v1.1","Klebsormidium nitens","(at5g43080 : 138.0) Cyclin A3;1 (CYCA3;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25010|ccnal_dauca : 132.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 276.0) & (original description: no original description)","protein_coding" "Kfl00130_0230","kfl00130_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00131_0170","kfl00131_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00135_0100","kfl00135_0100_v1.1","Klebsormidium nitens","(at5g41880 : 457.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 914.0) & (original description: no original description)","protein_coding" "Kfl00141_0070","kfl00141_0070_v1.1","Klebsormidium nitens","(at1g66740 : 256.0) Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility.; SGA2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chromatin assembly or disassembly, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone, ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: anti- silencing function 1b (TAIR:AT5G38110.1); Has 608 Blast hits to 608 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 247; Fungi - 167; Plants - 75; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)","protein_coding" "Kfl00144_0030","kfl00144_0030_v1.1","Klebsormidium nitens","(at1g18335 : 168.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description)","protein_coding" "Kfl00144_0180","kfl00144_0180_v1.1","Klebsormidium nitens","(at1g24470 : 90.5) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 2 (KCR2); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 1 (TAIR:AT1G67730.1); Has 80088 Blast hits to 80001 proteins in 3265 species: Archae - 726; Bacteria - 55481; Metazoa - 4714; Fungi - 3206; Plants - 2039; Viruses - 0; Other Eukaryotes - 13922 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)","protein_coding" "Kfl00169_0080","kfl00169_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00173_0090","kfl00173_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00176_0100","kfl00176_0100_v1.1","Klebsormidium nitens","(at5g58140 : 89.4) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (q5z8k3|ado1_orysa : 87.0) Adagio-like protein 1 - Oryza sativa (Rice) & (reliability: 169.4) & (original description: no original description)","protein_coding" "Kfl00181_0220","kfl00181_0220_v1.1","Klebsormidium nitens","(at4g08990 : 1038.0) DNA (cytosine-5-)-methyltransferase family protein; FUNCTIONS IN: DNA binding, DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: DNA methylation; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA (cytosine-5)-methyltransferase 1 (InterPro:IPR017198), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117); BEST Arabidopsis thaliana protein match is: DNA methyltransferase 2 (TAIR:AT4G14140.1); Has 7214 Blast hits to 6137 proteins in 1440 species: Archae - 249; Bacteria - 4362; Metazoa - 525; Fungi - 274; Plants - 335; Viruses - 111; Other Eukaryotes - 1358 (source: NCBI BLink). & (q9axt8|cmt1_maize : 184.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (reliability: 2076.0) & (original description: no original description)","protein_coding" "Kfl00200_0040","kfl00200_0040_v1.1","Klebsormidium nitens","(at5g22750 : 253.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 468.0) & (original description: no original description)","protein_coding" "Kfl00202_0040","kfl00202_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00203_0160","kfl00203_0160_v1.1","Klebsormidium nitens","(at1g10930 : 726.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 1452.0) & (original description: no original description)","protein_coding" "Kfl00208_0200","kfl00208_0200_v1.1","Klebsormidium nitens","(at3g48540 : 256.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)","protein_coding" "Kfl00208_0210","kfl00208_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00209_0100","kfl00209_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00211_0100","kfl00211_0100_v1.1","Klebsormidium nitens","(at4g09020 : 951.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1902.0) & (original description: no original description)","protein_coding" "Kfl00212_0120","kfl00212_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00213_0030","kfl00213_0030_v1.1","Klebsormidium nitens","(at1g04730 : 462.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (reliability: 924.0) & (original description: no original description)","protein_coding" "Kfl00220_0150","kfl00220_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00221_0210","kfl00221_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00222_0100","kfl00222_0100_v1.1","Klebsormidium nitens","(at5g37630 : 265.0) EMBRYO DEFECTIVE 2656 (EMB2656); FUNCTIONS IN: binding; INVOLVED IN: mitotic chromosome condensation, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 333 Blast hits to 316 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 113; Fungi - 138; Plants - 47; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "Kfl00224_0030","kfl00224_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00231_0010","kfl00231_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00234_0120","kfl00234_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00250_0150","kfl00250_0150_v1.1","Klebsormidium nitens","(at3g16730 : 121.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "Kfl00257_0120","kfl00257_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00258_0040","kfl00258_0040_v1.1","Klebsormidium nitens","(at4g15890 : 412.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 824.0) & (original description: no original description)","protein_coding" "Kfl00274_0090","kfl00274_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00281_0130","kfl00281_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00290_0040","kfl00290_0040_v1.1","Klebsormidium nitens","(at4g15475 : 145.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "Kfl00302_0030","kfl00302_0030_v1.1","Klebsormidium nitens","(at1g67780 : 163.0) Zinc-finger domain of monoamine-oxidase A repressor R1 protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain, subgroup (InterPro:IPR018500), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 protein (TAIR:AT1G67270.1); Has 462 Blast hits to 453 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 73; Plants - 215; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)","protein_coding" "Kfl00302_0040","kfl00302_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00304_0110","kfl00304_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00305_0070","kfl00305_0070_v1.1","Klebsormidium nitens","(at1g74030 : 598.0) Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.; enolase 1 (ENO1); FUNCTIONS IN: phosphopyruvate hydratase activity; INVOLVED IN: trichome morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13710 Blast hits to 13689 proteins in 3755 species: Archae - 283; Bacteria - 5826; Metazoa - 2303; Fungi - 284; Plants - 460; Viruses - 0; Other Eukaryotes - 4554 (source: NCBI BLink). & (q43130|eno_mescr : 542.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1196.0) & (original description: no original description)","protein_coding" "Kfl00309_0170","kfl00309_0170_v1.1","Klebsormidium nitens","(at5g63920 : 891.0) Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.; topoisomerase 3alpha (TOP3A); FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: in 7 processes; LOCATED IN: chromosome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IA, zn finger (InterPro:IPR013498), DNA topoisomerase, type IA, core (InterPro:IPR000380), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, central (InterPro:IPR013497), Zinc finger, GRF-type (InterPro:IPR010666), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826), Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), Toprim domain (InterPro:IPR006171), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: DNA topoisomerase, type IA, core (TAIR:AT2G32000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1782.0) & (original description: no original description)","protein_coding" "Kfl00323_0110","kfl00323_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00323_0130","kfl00323_0130_v1.1","Klebsormidium nitens","(at3g46940 : 221.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description)","protein_coding" "Kfl00323_0170","kfl00323_0170_v1.1","Klebsormidium nitens","(at5g23240 : 148.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)","protein_coding" "Kfl00327_0060","kfl00327_0060_v1.1","Klebsormidium nitens","(at4g32700 : 819.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 1638.0) & (original description: no original description)","protein_coding" "Kfl00330_0070","kfl00330_0070_v1.1","Klebsormidium nitens","(o23787|thi4_citsi : 475.0) Thiazole biosynthetic enzyme, chloroplast precursor - Citrus sinensis (Sweet orange) & (at5g54770 : 471.0) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.; THI1; FUNCTIONS IN: protein homodimerization activity, zinc ion binding; INVOLVED IN: oxazole or thiazole biosynthetic process, response to cold, thiamin biosynthetic process, response to DNA damage stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis Thi4 protein (InterPro:IPR002922); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 942.0) & (original description: no original description)","protein_coding" "Kfl00334_0080","kfl00334_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00334_0090","kfl00334_0090_v1.1","Klebsormidium nitens","(at3g48160 : 187.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 374.0) & (original description: no original description)","protein_coding" "Kfl00340_0020","kfl00340_0020_v1.1","Klebsormidium nitens","(at4g33680 : 587.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1174.0) & (original description: no original description)","protein_coding" "Kfl00348_0110","kfl00348_0110_v1.1","Klebsormidium nitens","(at2g39440 : 108.0) CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)","protein_coding" "Kfl00349_0050","kfl00349_0050_v1.1","Klebsormidium nitens","(o48653|dpola_orysa : 1124.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 1019.0) Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2038.0) & (original description: no original description)","protein_coding" "Kfl00349_0090","kfl00349_0090_v1.1","Klebsormidium nitens","(at3g25100 : 380.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description)","protein_coding" "Kfl00349_0100","kfl00349_0100_v1.1","Klebsormidium nitens","(at3g60830 : 373.0) Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.; actin-related protein 7 (ARP7); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12219 Blast hits to 11995 proteins in 2504 species: Archae - 0; Bacteria - 50; Metazoa - 5224; Fungi - 3189; Plants - 1407; Viruses - 2; Other Eukaryotes - 2347 (source: NCBI BLink). & (p30173|act13_soltu : 236.0) Actin-101 - Solanum tuberosum (Potato) & (reliability: 746.0) & (original description: no original description)","protein_coding" "Kfl00358_0060","kfl00358_0060_v1.1","Klebsormidium nitens","(at3g52950 : 407.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1). & (reliability: 814.0) & (original description: no original description)","protein_coding" "Kfl00373_0040","kfl00373_0040_v1.1","Klebsormidium nitens","(q9mum5|mind_mesvi : 261.0) Putative septum site-determining protein minD - Mesostigma viride & (at5g24020 : 219.0) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor.; MIND; FUNCTIONS IN: calcium-dependent ATPase activity, protein binding, ATPase activity, protein homodimerization activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Septum site-determining protein MinD (InterPro:IPR010223), Cobyrinic acid a,c-diamide synthase (InterPro:IPR002586); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)","protein_coding" "Kfl00381_0040","kfl00381_0040_v1.1","Klebsormidium nitens","(at1g10930 : 306.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 612.0) & (original description: no original description)","protein_coding" "Kfl00394_0110","kfl00394_0110_v1.1","Klebsormidium nitens","(at2g20980 : 139.0) Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication.; minichromosome maintenance 10 (MCM10); CONTAINS InterPro DOMAIN/s: Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "Kfl00411_0100","kfl00411_0100_v1.1","Klebsormidium nitens","(at5g48600 : 1014.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (reliability: 2028.0) & (original description: no original description)","protein_coding" "Kfl00418_0100","kfl00418_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00422_0150","kfl00422_0150_v1.1","Klebsormidium nitens","(at1g67630 : 373.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 746.0) & (original description: no original description)","protein_coding" "Kfl00425_0030","kfl00425_0030_v1.1","Klebsormidium nitens","(at3g18370 : 142.0) ATSYTF; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 3360; Fungi - 437; Plants - 1305; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "Kfl00434_0080","kfl00434_0080_v1.1","Klebsormidium nitens","(at4g08920 : 663.0) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.; cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40115|phr1_sinal : 592.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1326.0) & (original description: no original description)","protein_coding" "Kfl00489_0040","kfl00489_0040_v1.1","Klebsormidium nitens","(at2g21790 : 1267.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 2534.0) & (original description: no original description)","protein_coding" "Kfl00511_0110","kfl00511_0110_v1.1","Klebsormidium nitens","(at5g21140 : 141.0) embryo defective 1379 (emb1379); CONTAINS InterPro DOMAIN/s: Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513), Zinc finger, RING-like (InterPro:IPR014857); Has 255 Blast hits to 254 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description)","protein_coding" "Kfl00531_0085","kfl00531_0085_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00539_0100","kfl00539_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00561_0040","kfl00561_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00575_0070","kfl00575_0070_v1.1","Klebsormidium nitens","(at3g05420 : 141.0) Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39610|dyha_chlre : 92.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 282.0) & (original description: no original description)","protein_coding" "Kfl00582_g4","kfl00582_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00593_0030","kfl00593_0030_v1.1","Klebsormidium nitens","(at3g13490 : 625.0) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.; OVULE ABORTION 5 (OVA5); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Lysyl-tRNA synthetase, class II (InterPro:IPR002313); BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1); Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404; Bacteria - 18954; Metazoa - 615; Fungi - 809; Plants - 266; Viruses - 0; Other Eukaryotes - 6441 (source: NCBI BLink). & (q6f2u9|syk_orysa : 326.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1250.0) & (original description: no original description)","protein_coding" "Kfl00593_0080","kfl00593_0080_v1.1","Klebsormidium nitens","(at1g08540 : 226.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 452.0) & (original description: no original description)","protein_coding" "Kfl00608_0090","kfl00608_0090_v1.1","Klebsormidium nitens","(at5g61460 : 571.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1142.0) & (original description: no original description)","protein_coding" "Kfl00626_0050","kfl00626_0050_v1.1","Klebsormidium nitens","(at3g18524 : 1095.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 1091.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 2190.0) & (original description: no original description)","protein_coding" "Kfl00640_0020","kfl00640_0020_v1.1","Klebsormidium nitens","(at1g80380 : 354.0) encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.; P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: glycerate kinase activity; INVOLVED IN: photorespiration; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 708.0) & (original description: no original description)","protein_coding" "Kfl00644_0020","kfl00644_0020_v1.1","Klebsormidium nitens","(at4g14770 : 146.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "Kfl00647_0030","kfl00647_0030_v1.1","Klebsormidium nitens","(at2g37210 : 233.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (reliability: 452.0) & (original description: no original description)","protein_coding" "Kfl00647_0040","kfl00647_0040_v1.1","Klebsormidium nitens","(at3g48110 : 1020.0) glycine-tRNA ligase; EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS IN: glycine-tRNA ligase activity; INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal (InterPro:IPR002311), Glycyl-tRNA synthetase, class II, heterodimeric (InterPro:IPR006194), Glycyl-tRNA synthetase, class IIc, beta subunit (InterPro:IPR015944), Glycyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR002310); Has 11308 Blast hits to 11293 proteins in 1754 species: Archae - 4; Bacteria - 6864; Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 4395 (source: NCBI BLink). & (reliability: 2040.0) & (original description: no original description)","protein_coding" "Kfl00649_0050","kfl00649_0050_v1.1","Klebsormidium nitens","(at1g08840 : 249.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 498.0) & (original description: no original description)","protein_coding" "Kfl00651_0060","kfl00651_0060_v1.1","Klebsormidium nitens","(at1g15980 : 299.0) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.; NDH-dependent cyclic electron flow 1 (NDF1); INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, NAD(P)H dehydrogenase complex (plastoquinone); EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 119 Blast hits to 119 proteins in 57 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)","protein_coding" "Kfl00733_0030","kfl00733_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00736_0030","kfl00736_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00759_0050","kfl00759_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00814_0010","kfl00814_0010_v1.1","Klebsormidium nitens","(at3g54630 : 135.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)","protein_coding" "Kfl00826_0040","kfl00826_0040_v1.1","Klebsormidium nitens","(at1g70680 : 100.0) Caleosin-related family protein; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: Caleosin-related family protein (TAIR:AT1G70670.1); Has 342 Blast hits to 337 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 281; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "Kfl00866_0040","kfl00866_0040_v1.1","Klebsormidium nitens","(q40687|gbb_orysa : 341.0) Guanine nucleotide-binding protein subunit beta - Oryza sativa (Rice) & (at4g34460 : 332.0) Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 59918 Blast hits to 28704 proteins in 832 species: Archae - 54; Bacteria - 8355; Metazoa - 23550; Fungi - 12390; Plants - 7677; Viruses - 0; Other Eukaryotes - 7892 (source: NCBI BLink). & (reliability: 664.0) & (original description: no original description)","protein_coding" "Kfl00914_0020","kfl00914_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00923_0010","kfl00923_0010_v1.1","Klebsormidium nitens","(at2g01320 : 654.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 225.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1308.0) & (original description: no original description)","protein_coding" "Kfl01000_0010","kfl01000_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g09340","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g09710","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g11510","No alias","Oryza sativa","OsMADS91 - MADS-box family gene with M-beta type-box, expressed","protein_coding" "LOC_Os01g24470","No alias","Oryza sativa","PHS1, putative, expressed","protein_coding" "LOC_Os01g25430","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g32150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g36850","No alias","Oryza sativa","transposon protein, putative, Pong sub-class, expressed","protein_coding" "LOC_Os01g41540","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os01g46670","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g48530","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g65850","No alias","Oryza sativa","CHD3-type chromatin-remodeling factor PICKLE, putative, expressed","protein_coding" "LOC_Os01g70860","No alias","Oryza sativa","esterase, putative, expressed","protein_coding" "LOC_Os02g11720","No alias","Oryza sativa","lipase, putative, expressed","protein_coding" "LOC_Os02g17620","No alias","Oryza sativa","isochorismatase family protein, putative, expressed","protein_coding" "LOC_Os02g18750","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g27580","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os02g43680","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g48270","No alias","Oryza sativa","DUF260 domain containing protein, putative","protein_coding" "LOC_Os02g49650","No alias","Oryza sativa","leaf senescence related protein, putative, expressed","protein_coding" "LOC_Os02g53030","No alias","Oryza sativa","mitogen-activated protein kinase kinase kinase 1, putative, expressed","protein_coding" "LOC_Os03g03280","No alias","Oryza sativa","TKL_IRAK_CrRLK1L-1.6 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed","protein_coding" "LOC_Os03g05510","No alias","Oryza sativa","DUF260 domain containing protein, putative, expressed","protein_coding" "LOC_Os03g26120","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os03g27680","No alias","Oryza sativa","conserved hypothetical protein","protein_coding" "LOC_Os03g31440","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g31630","No alias","Oryza sativa","OsSub29 - Putative Subtilisin homologue, expressed","protein_coding" "LOC_Os03g31634","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g43590","No alias","Oryza sativa","LSTK-1-like kinase, putative, expressed","protein_coding" "LOC_Os03g45519","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding" "LOC_Os03g58600","No alias","Oryza sativa","PAZ domain containing protein, putative, expressed","protein_coding" "LOC_Os03g61460","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g16070","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g16410","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os04g17330","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g19800","No alias","Oryza sativa","F-box domain containing protein, expressed","protein_coding" "LOC_Os04g24510","No alias","Oryza sativa","OsWAK36 - OsWAK receptor-like protein kinase, expressed","protein_coding" "LOC_Os04g32360","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g32740","No alias","Oryza sativa","hydrolase, NUDIX family, domain containing protein, expressed","protein_coding" "LOC_Os04g33540","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g35420","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding" "LOC_Os04g39940","No alias","Oryza sativa","brevis radix, putative, expressed","protein_coding" "LOC_Os04g42910","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g42960","No alias","Oryza sativa","Lung seven transmembrane receptor domain containing protein, putative, expressed","protein_coding" "LOC_Os04g43880","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g51640","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g52074","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g53560","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g03240","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os05g07250","No alias","Oryza sativa","mitochondrial import inner membrane translocase subunit Tim17, putative, expressed","protein_coding" "LOC_Os05g12150","No alias","Oryza sativa","endoglucanase precursor, putative, expressed","protein_coding" "LOC_Os05g13470","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os05g15080","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g16040","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os05g43190","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g43750","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os05g46310","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g51680","No alias","Oryza sativa","SCP-like extracellular protein, expressed","protein_coding" "LOC_Os06g08820","No alias","Oryza sativa","RING-H2 finger protein, putative, expressed","protein_coding" "LOC_Os06g13910","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g20890","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os06g21960","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g22150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g35100","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g37840","No alias","Oryza sativa","resistance protein, putative, expressed","protein_coding" "LOC_Os06g40290","No alias","Oryza sativa","conserved hypothetical protein","protein_coding" "LOC_Os06g42120","No alias","Oryza sativa","sulfotransferase domain containing protein, expressed","protein_coding" "LOC_Os06g43080","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g48560","No alias","Oryza sativa","transferase family protein, putative, expressed","protein_coding" "LOC_Os07g06610","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding" "LOC_Os07g15730","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding" "LOC_Os07g18100","No alias","Oryza sativa","conserved hypothetical protein","protein_coding" "LOC_Os07g28260","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g28460","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os07g36360","No alias","Oryza sativa","OsFBO19 - F-box and other domain containing protein, expressed","protein_coding" "LOC_Os07g42924","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding" "LOC_Os07g43690","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g47210","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding" "LOC_Os07g48360","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding" "LOC_Os08g03760","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os08g10760","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g19820","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g31080","No alias","Oryza sativa","DUF260 domain containing protein, putative, expressed","protein_coding" "LOC_Os08g32490","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g32890","No alias","Oryza sativa","disease resistance protein RPM1, putative, expressed","protein_coding" "LOC_Os08g36380","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g06480","No alias","Oryza sativa","retrotransposon, putative, centromere-specific","protein_coding" "LOC_Os09g10580","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g14780","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding" "LOC_Os09g17720","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os09g19400","No alias","Oryza sativa","senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed","protein_coding" "LOC_Os09g24500","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g26840","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g08210","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding" "LOC_Os10g11220","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding" "LOC_Os10g13820","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g21770","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g22940","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g24860","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g25040","No alias","Oryza sativa","red chlorophyll catabolite reductase, putative, expressed","protein_coding" "LOC_Os10g26470","No alias","Oryza sativa","sucrose transporter, putativ, expressed","protein_coding" "LOC_Os10g26820","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g42730","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g01200","No alias","Oryza sativa","senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed","protein_coding" "LOC_Os11g02500","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os11g03870","No alias","Oryza sativa","LTPL31 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding" "LOC_Os11g28660","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os11g28920","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g29760","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os11g39830","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g41570","No alias","Oryza sativa","OsFBX428 - F-box domain containing protein, expressed","protein_coding" "LOC_Os11g45380","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding" "LOC_Os11g48000","No alias","Oryza sativa","ZOS11-11 - C2H2 zinc finger protein, expressed","protein_coding" "LOC_Os12g16260","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g23750","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g24640","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g35420","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os12g36970","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g37480","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding" "LOC_Os12g39330","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding" "MA_10019752g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_100751g0010","No alias","Picea abies","(at5g05520 : 224.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G11070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description)","protein_coding" "MA_10298683g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10428214g0010","No alias","Picea abies","(at2g16070 : 87.8) An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.; PLASTID DIVISION2 (PDV2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid fission; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid division1 (TAIR:AT5G53280.1); Has 92 Blast hits to 92 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 86; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "MA_10429085g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10429244g0010","No alias","Picea abies","(at2g47790 : 111.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "MA_10433214g0010","No alias","Picea abies","(at1g05410 : 95.1) Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)","protein_coding" "MA_10436225g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10436537g0010","No alias","Picea abies","(at1g10930 : 901.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 1802.0) & (original description: no original description)","protein_coding" "MA_111261g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_15380g0010","No alias","Picea abies","(at1g32790 : 313.0) RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.; CTC-interacting domain 11 (CID11); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12 (TAIR:AT4G10610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 626.0) & (original description: no original description)","protein_coding" "MA_18435g0010","No alias","Picea abies","(at3g26780 : 317.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; LOCATED IN: cytosol, mitochondrion; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Uncharacterised conserved protein UCP036920, phosphoglycerate mutase, plant X4/Y4 (InterPro:IPR017070); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G12850.1); Has 3099 Blast hits to 3054 proteins in 1059 species: Archae - 8; Bacteria - 2226; Metazoa - 233; Fungi - 43; Plants - 144; Viruses - 0; Other Eukaryotes - 445 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description)","protein_coding" "MA_387336g0010","No alias","Picea abies","(at3g22670 : 422.0) Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04130.2); Has 39777 Blast hits to 13686 proteins in 296 species: Archae - 5; Bacteria - 61; Metazoa - 326; Fungi - 524; Plants - 37538; Viruses - 0; Other Eukaryotes - 1323 (source: NCBI BLink). & (q76c99|rf1_orysa : 146.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 844.0) & (original description: no original description)","protein_coding" "MA_4945967g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_600956g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "Potri.003G015800","No alias","Populus trichocarpa","DNA helicase (RECQl4A)","protein_coding" "Potri.003G017500","No alias","Populus trichocarpa","DNA helicase (RECQl4A)","protein_coding" "Potri.013G161200","No alias","Populus trichocarpa","RECQ helicase L2","protein_coding" "Pp1s101_178V6","No alias","Physcomitrella patens","wound responsive protein","protein_coding" "Pp1s104_112V6","No alias","Physcomitrella patens","vacuolar protein sorting 41","protein_coding" "Pp1s121_92V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s125_53V6","No alias","Physcomitrella patens","MJC20.5; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s128_34V6","No alias","Physcomitrella patens","atp-dependent dna helicase","protein_coding" "Pp1s131_119V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s132_178V6","No alias","Physcomitrella patens","pseudouridine synthase","protein_coding" "Pp1s136_205V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s136_81V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s138_122V6","No alias","Physcomitrella patens","F23A5.31; phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana]","protein_coding" "Pp1s13_170V6","No alias","Physcomitrella patens","poly(adp-ribose) glycohydrolase","protein_coding" "Pp1s163_45V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s164_9V6","No alias","Physcomitrella patens","T22P22.90; glycine-rich protein [Arabidopsis thaliana]","protein_coding" "Pp1s165_38V6","No alias","Physcomitrella patens","T20K18.130; auxilin-related [Arabidopsis thaliana]","protein_coding" "Pp1s167_15V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s16_146V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s171_149V6","No alias","Physcomitrella patens","MAA21.90; WD-40 repeat family protein [Arabidopsis thaliana]","protein_coding" "Pp1s19_294V6","No alias","Physcomitrella patens","atp binding","protein_coding" "Pp1s1_581V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s1_781V6","No alias","Physcomitrella patens","centromere kinetochore protein zw10","protein_coding" "Pp1s1_853V6","No alias","Physcomitrella patens","extremely serine rich protein [Candida albicans SC5314]","protein_coding" "Pp1s201_111V6","No alias","Physcomitrella patens","adenylate kinase","protein_coding" "Pp1s203_40V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s204_101V6","No alias","Physcomitrella patens","FCAALL.148; hypothetical protein [Arabidopsis thaliana]","protein_coding" "Pp1s20_22V6","No alias","Physcomitrella patens","2og-fe oxygenase","protein_coding" "Pp1s213_28V6","No alias","Physcomitrella patens","trna 2 -phosphotransferase 1","protein_coding" "Pp1s22_182V6","No alias","Physcomitrella patens","F5N5.20; heterotrimeric G protein protein gamma subunit (AGG2) [Arabidopsis thaliana]","protein_coding" "Pp1s233_64V6","No alias","Physcomitrella patens","MXC17.7; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s238_70V6","No alias","Physcomitrella patens","transcription factor","protein_coding" "Pp1s23_193V6","No alias","Physcomitrella patens","scramblase family protein","protein_coding" "Pp1s23_270V6","No alias","Physcomitrella patens","Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich glycoprotein 1) [Chlamydomonas reinhardtii]","protein_coding" "Pp1s242_41V6","No alias","Physcomitrella patens","K21L19.11; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s242_87V6","No alias","Physcomitrella patens","Myh1; type 2X myosin heavy chain [Rattus norvegicus]","protein_coding" "Pp1s243_58V6","No alias","Physcomitrella patens","dna helicase","protein_coding" "Pp1s26_38V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s281_119V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s284_71V6","No alias","Physcomitrella patens","amino acid selective channel protein","protein_coding" "Pp1s297_36V6","No alias","Physcomitrella patens","F19C24.6; RWD domain-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s315_56V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s323_86V6","No alias","Physcomitrella patens","fructose-6-phosphate aldolase","protein_coding" "Pp1s326_24V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s335_46V6","No alias","Physcomitrella patens","CDK5RAP3-like protein [Arabidopsis thaliana]","protein_coding" "Pp1s34_365V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s35_108V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding" "Pp1s36_51V6","No alias","Physcomitrella patens","K7J8.7; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s39_345V6","No alias","Physcomitrella patens","acetyltransferase family protein","protein_coding" "Pp1s39_63V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 55","protein_coding" "Pp1s403_18V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s41_163V6","No alias","Physcomitrella patens","peptidase m15b and m15c dd-carboxypeptidase endolysin","protein_coding" "Pp1s462_2V6","No alias","Physcomitrella patens","heterogeneous nuclear","protein_coding" "Pp1s46_192V6","No alias","Physcomitrella patens","golgi snare 12 protein","protein_coding" "Pp1s48_116V6","No alias","Physcomitrella patens","T6I14.30; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s49_163V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s4_128V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s51_3V6","No alias","Physcomitrella patens","MAE1.11; UVB-resistance protein UVR8 - like [Arabidopsis thaliana]","protein_coding" "Pp1s54_25V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s55_244V6","No alias","Physcomitrella patens","F15G16.190; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s62_69V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s64_180V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s66_160V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s6_334V6","No alias","Physcomitrella patens","1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Aci-reductone dioxygenase) (ARD) [no tax name]","protein_coding" "Pp1s73_156V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s74_264V6","No alias","Physcomitrella patens","r2r3-myb transcription","protein_coding" "Pp1s78_6V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s7_300V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s7_433V6","No alias","Physcomitrella patens","ribonuclease p","protein_coding" "Pp1s80_180V6","No alias","Physcomitrella patens","dnaj domain containing protein","protein_coding" "Pp1s80_186V6","No alias","Physcomitrella patens","1-acyl-sn-glycerol-3-phosphate acyltransferase","protein_coding" "Pp1s81_35V6","No alias","Physcomitrella patens","F7A19.14; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s81_61V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s82_106V6","No alias","Physcomitrella patens","F14P22.120; F-box family protein-related [Arabidopsis thaliana]","protein_coding" "Pp1s82_92V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s93_66V6","No alias","Physcomitrella patens","dna helicase","protein_coding" "Pp1s97_71V6","No alias","Physcomitrella patens","calcium-dependent protein","protein_coding" "Pp1s9_252V6","No alias","Physcomitrella patens","No description available","protein_coding" "Solyc01g006100","No alias","Solanum lycopersicum","cytosine-5 DNA methyltransferase1L","protein_coding" "Solyc01g007850","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061F6E7_THECC)","protein_coding" "Solyc01g020440","No alias","Solanum lycopersicum","Replication factor C subunit 3 (AHRD V3.3 *** RFC3_ARATH)","protein_coding" "Solyc01g056990","No alias","Solanum lycopersicum","Methyl-CpG-binding domain protein 4 (AHRD V3.3 *** A0A1D1YE90_9ARAE)","protein_coding" "Solyc01g067480","No alias","Solanum lycopersicum","Acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A0B0MQV8_GOSAR)","protein_coding" "Solyc01g067500","No alias","Solanum lycopersicum","Serine/threonine-protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** G7JK96_MEDTR)","protein_coding" "Solyc01g067720","No alias","Solanum lycopersicum","Vesicle-associated 2-2-like protein (AHRD V3.3 *** A0A0B0PX66_GOSAR)","protein_coding" "Solyc01g068150","No alias","Solanum lycopersicum","NEFA-interacting nuclear protein NIP30, putative (AHRD V3.3 *** B9RN44_RICCO)","protein_coding" "Solyc01g074000","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU)","protein_coding" "Solyc01g079110","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH)","protein_coding" "Solyc01g079340","No alias","Solanum lycopersicum","protein kinase superfamily protein","protein_coding" "Solyc01g080600","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)","protein_coding" "Solyc01g086820","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)","protein_coding" "Solyc01g086930","No alias","Solanum lycopersicum","GAMMA RESPONSE 1 family protein (AHRD V3.3 *** B9GFQ6_POPTR)","protein_coding" "Solyc01g090690","No alias","Solanum lycopersicum","Elongation factor G, mitochondrial (AHRD V3.3 *** K4AZ10_SOLLC)","protein_coding" "Solyc01g091120","No alias","Solanum lycopersicum","myosin-4 protein (DUF641) (AHRD V3.3 *** AT2G45260.1)","protein_coding" "Solyc01g091230","No alias","Solanum lycopersicum","Receptor-like kinase (AHRD V3.3 *** A0A191UPW4_CASSA)","protein_coding" "Solyc01g091310","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G00090.1)","protein_coding" "Solyc01g096680","No alias","Solanum lycopersicum","Microtubule associated family protein (AHRD V3.3 *** B9GX96_POPTR)","protein_coding" "Solyc01g097070","No alias","Solanum lycopersicum","DNA topoisomerase (AHRD V3.3 *** K4B095_SOLLC)","protein_coding" "Solyc01g097500","No alias","Solanum lycopersicum","LSTK-1-like kinase","protein_coding" "Solyc01g099410","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC)","protein_coding" "Solyc01g102550","No alias","Solanum lycopersicum","Nuclear pore complex protein Nup160 (AHRD V3.3 *-* A0A0B2S403_GLYSO),Pfam:PF11715","protein_coding" "Solyc01g103960","No alias","Solanum lycopersicum","RNA helicase DEAH-box15","protein_coding" "Solyc01g104230","No alias","Solanum lycopersicum","F-box protein (AHRD V3.3 *** A0A0B2RMW5_GLYSO)","protein_coding" "Solyc01g105570","No alias","Solanum lycopersicum","U2 small nuclear ribonucleoprotein auxiliary factor-like protein (AHRD V3.3 *-* AT5G64010.1)","protein_coding" "Solyc01g110490","No alias","Solanum lycopersicum","Zinc finger transcription factor 15","protein_coding" "Solyc02g022870","No alias","Solanum lycopersicum","Maternal effect embryo arrest protein (AHRD V3.3 *** A0A072VFX6_MEDTR)","protein_coding" "Solyc02g032870","No alias","Solanum lycopersicum","Tyrosyl-DNA phosphodiesterase 2 (AHRD V3.3 *** W9R361_9ROSA)","protein_coding" "Solyc02g038690","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4B5W3_SOLLC)","protein_coding" "Solyc02g044030","No alias","Solanum lycopersicum","C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *-* A0A072TGP1_MEDTR)","protein_coding" "Solyc02g063060","No alias","Solanum lycopersicum","Zinc-finger domain of monoamine-oxidase A repressor R1 protein (AHRD V3.3 *** AT5G38690.2)","protein_coding" "Solyc02g063070","No alias","Solanum lycopersicum","tft4","protein_coding" "Solyc02g065370","No alias","Solanum lycopersicum","UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A0B0MSS3_GOSAR)","protein_coding" "Solyc02g065410","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YH70_CYNCS)","protein_coding" "Solyc02g068130","No alias","Solanum lycopersicum","Mitochondrial import receptor subunit TOM20 (AHRD V3.3 *** TOM20_SOLTU)","protein_coding" "Solyc02g070540","No alias","Solanum lycopersicum","carbohydrate binding domain-containing protein","protein_coding" "Solyc02g077480","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)","protein_coding" "Solyc02g078200","No alias","Solanum lycopersicum","50S ribosomal protein L21, related protein (AHRD V3.3 *** G7KWH0_MEDTR)","protein_coding" "Solyc02g078330","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RW07_RICCO)","protein_coding" "Solyc02g083990","No alias","Solanum lycopersicum","polyamine-modulated factor 1-binding protein (AHRD V3.3 *** AT2G17990.3)","protein_coding" "Solyc02g084700","No alias","Solanum lycopersicum","MORC family CW-type zinc finger protein 4 (AHRD V3.3 *** A0A0B0P1Q2_GOSAR)","protein_coding" "Solyc02g087980","No alias","Solanum lycopersicum","Structural maintenance of chromosomes protein (AHRD V3.3 *** K4BBV4_SOLLC)","protein_coding" "Solyc02g089340","No alias","Solanum lycopersicum","DNA-directed RNA polymerase (AHRD V3.3 *** K4BC86_SOLLC)","protein_coding" "Solyc02g090140","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc02g092950","No alias","Solanum lycopersicum","RP/EB family microtubule-associated protein (AHRD V3.3 *** G7K588_MEDTR)","protein_coding" "Solyc02g093590","No alias","Solanum lycopersicum","Zinc finger CONSTANS-LIKE 7-like protein (AHRD V3.3 *** A0A0B0PB06_GOSAR)","protein_coding" "Solyc02g093950","No alias","Solanum lycopersicum","Ankyrin repeat (AHRD V3.3 *** A0A061EKD2_THECC)","protein_coding" "Solyc02g094090","No alias","Solanum lycopersicum","Vacuolar protein sorting-associated protein 52 like (AHRD V3.3 *** A0A0B2S8X6_GLYSO)","protein_coding" "Solyc03g007550","No alias","Solanum lycopersicum","LIM domain-containing protein A, putative isoform 1 (AHRD V3.3 *** A0A061G8M8_THECC)","protein_coding" "Solyc03g025530","No alias","Solanum lycopersicum","Oxidoreductase/transition metal ion-binding protein, putative (AHRD V3.3 *** A0A072UAG3_MEDTR)","protein_coding" "Solyc03g025690","No alias","Solanum lycopersicum","Chaperone protein DnaJ (AHRD V3.3 *** A0A1D1YJ37_9ARAE)","protein_coding" "Solyc03g062700","No alias","Solanum lycopersicum","ARM repeat superfamily protein (AHRD V3.3 *** A0A061F2F3_THECC)","protein_coding" "Solyc03g063720","No alias","Solanum lycopersicum","RING/FYVE/PHD zinc finger superfamily protein, putative (AHRD V3.3 *-* A0A061GYX1_THECC)","protein_coding" "Solyc03g093250","No alias","Solanum lycopersicum","Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A068V0V7_COFCA)","protein_coding" "Solyc03g093260","No alias","Solanum lycopersicum","Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A072TZX1_MEDTR)","protein_coding" "Solyc03g093490","No alias","Solanum lycopersicum","WD-repeat protein, putative (AHRD V3.3 *** B9R9Y2_RICCO)","protein_coding" "Solyc03g096820","No alias","Solanum lycopersicum","Aluminum-activated malate transporter-like (AHRD V3.3 *** K4BJA0_SOLLC)","protein_coding" "Solyc03g098430","No alias","Solanum lycopersicum","Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4BJQ8_SOLLC)","protein_coding" "Solyc03g113450","No alias","Solanum lycopersicum","Receptor-like protein kinase (AHRD V3.3 *** Q9FM23_ARATH)","protein_coding" "Solyc03g113760","No alias","Solanum lycopersicum","E2F transcription factor-like E2FE (AHRD V3.3 *** W9SXR3_9ROSA)","protein_coding" "Solyc03g117650","No alias","Solanum lycopersicum","Phosphatidylinositol-glycan biosynthesis class F protein (AHRD V3.3 --* A0A199W8X3_ANACO)","protein_coding" "Solyc03g118350","No alias","Solanum lycopersicum","dual specificity protein phosphatase family protein (AHRD V3.3 *** AT5G23720.2)","protein_coding" "Solyc03g119490","No alias","Solanum lycopersicum","MAP kinase kinase 3","protein_coding" "Solyc04g007890","No alias","Solanum lycopersicum","HMG-Y-related protein A (AHRD V3.3 *** HMGYA_ARATH)","protein_coding" "Solyc04g008490","No alias","Solanum lycopersicum","putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7","protein_coding" "Solyc04g011390","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc04g011700","No alias","Solanum lycopersicum","Mitochondrial transcription termination factor family protein, putative (AHRD V3.3 *** A0A061DIZ3_THECC)","protein_coding" "Solyc04g015600","No alias","Solanum lycopersicum","LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072U3C5_MEDTR)","protein_coding" "Solyc04g016160","No alias","Solanum lycopersicum","Glycosyltransferase, putative (AHRD V3.3 *** B9T5B7_RICCO)","protein_coding" "Solyc04g016360","No alias","Solanum lycopersicum","S-formylglutathione hydrolase (AHRD V3.3 *** K4BQD6_SOLLC)","protein_coding" "Solyc04g045630","No alias","Solanum lycopersicum","CTD small phosphatase-like protein (AHRD V3.3 *** A0A0K9Q658_ZOSMR)","protein_coding" "Solyc04g051490","No alias","Solanum lycopersicum","essential meiotic endonuclease 1B (AHRD V3.3 *-* AT2G22140.1)","protein_coding" "Solyc04g055160","No alias","Solanum lycopersicum","N-lysine methyltransferase (AHRD V3.3 *** AT1G78150.2)","protein_coding" "Solyc04g056280","No alias","Solanum lycopersicum","cyclin dependent kinase C","protein_coding" "Solyc04g071180","No alias","Solanum lycopersicum","COMPLEX 1 LYR-like protein (AHRD V3.3 *** AT3G17300.3)","protein_coding" "Solyc04g072850","No alias","Solanum lycopersicum","Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC)","protein_coding" "Solyc04g073970","No alias","Solanum lycopersicum","N-lysine methyltransferase (AHRD V3.3 *** AT1G78150.3)","protein_coding" "Solyc04g074580","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE)","protein_coding" "Solyc04g078310","No alias","Solanum lycopersicum","cyclin A3_1","protein_coding" "Solyc04g081240","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc05g005800","No alias","Solanum lycopersicum","Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1)","protein_coding" "Solyc05g012100","No alias","Solanum lycopersicum","Fructokinase-like protein 2 (AHRD V3.3 *** D9IWP0_NICBE)","protein_coding" "Solyc05g017980","No alias","Solanum lycopersicum","Microtubule-associated protein 70-2 (AHRD V3.3 *** A0A0B2QPG9_GLYSO)","protein_coding" "Solyc05g023680","No alias","Solanum lycopersicum","RING-finger E3 ubiquitin ligase, putative (AHRD V3.3 *** A0A072VDM7_MEDTR)","protein_coding" "Solyc05g025500","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SWK2_RICCO)","protein_coding" "Solyc05g026510","No alias","Solanum lycopersicum","Sister-chromatide cohesion protein 3 (AHRD V3.3 *** D7LHE4_ARALL)","protein_coding" "Solyc05g050900","No alias","Solanum lycopersicum","Spindle and kinetochore-associated protein 1 homolog (AHRD V3.3 *** SKA1_ARATH)","protein_coding" "Solyc05g051520","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT2G22400.1)","protein_coding" "Solyc05g053520","No alias","Solanum lycopersicum","DNA polymerase delta subunit 4 family (AHRD V3.3 *** D7KJU8_ARALL)","protein_coding" "Solyc05g055440","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4C2M0_SOLLC)","protein_coding" "Solyc06g005390","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4C323_SOLLC)","protein_coding" "Solyc06g005430","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc06g048460","No alias","Solanum lycopersicum","Anaphase-promoting complex subunit 1 (AHRD V3.3 *** W9RQW6_9ROSA)","protein_coding" "Solyc06g048590","No alias","Solanum lycopersicum","Transmembrane receptor, eukaryota (AHRD V3.3 *** A0A124SFZ6_CYNCS)","protein_coding" "Solyc06g050770","No alias","Solanum lycopersicum","Alpha-soluble NSF attachment protein (AHRD V3.3 *** SNAA_SOLTU)","protein_coding" "Solyc06g053190","No alias","Solanum lycopersicum","Ypt/Rab-GAP domain of gyp1p superfamily protein (AHRD V3.3 *** AT3G49350.1)","protein_coding" "Solyc06g053210","No alias","Solanum lycopersicum","Ubiquitin (AHRD V3.3 *** J7G5B5_ROSRU)","protein_coding" "Solyc06g063170","No alias","Solanum lycopersicum","Glutamate receptor (AHRD V3.3 *** K4C748_SOLLC)","protein_coding" "Solyc06g065640","No alias","Solanum lycopersicum","Transcriptional corepressor LEUNIG (AHRD V3.3 *** W9SY16_9ROSA)","protein_coding" "Solyc06g065980","No alias","Solanum lycopersicum","Alba DNA/RNA-binding protein (AHRD V3.3 *** AT2G34160.1)","protein_coding" "Solyc06g068320","No alias","Solanum lycopersicum","tRNA synthetase-related family protein (AHRD V3.3 *** B9GTA1_POPTR)","protein_coding" "Solyc06g073330","No alias","Solanum lycopersicum","Lysine--tRNA ligase (AHRD V3.3 *** K4C952_SOLLC)","protein_coding" "Solyc06g074790","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** M1AAN4_SOLTU)","protein_coding" "Solyc06g075800","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC)","protein_coding" "Solyc06g075830","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc06g075850","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc06g075930","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc06g075960","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc06g076640","No alias","Solanum lycopersicum","Tubulin beta chain (AHRD V3.3 *** M1CZM0_SOLTU)","protein_coding" "Solyc06g082100","No alias","Solanum lycopersicum","U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *** AT1G20960.2)","protein_coding" "Solyc06g083080","No alias","Solanum lycopersicum","Pathogenic type III effector avirulence factor Avr cleavage site-containing protein (AHRD V3.3 *** A0A118JW76_CYNCS)","protein_coding" "Solyc06g083130","No alias","Solanum lycopersicum","dCTP pyrophosphatase 1 (AHRD V3.3 *** A0A151QMJ8_CAJCA)","protein_coding" "Solyc06g084090","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** K4CAR4_SOLLC)","protein_coding" "Solyc07g006160","No alias","Solanum lycopersicum","Lactation elevated protein 1 (AHRD V3.3 *** W9RT81_9ROSA)","protein_coding" "Solyc07g008430","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 --* AT3G56580.3)","protein_coding" "Solyc07g008610","No alias","Solanum lycopersicum","(DB142) meloidogyne-induced giant cell protein","protein_coding" "Solyc07g008950","No alias","Solanum lycopersicum","Methionyl-tRNA synthetase family protein (AHRD V3.3 *** B9N0S4_POPTR)","protein_coding" "Solyc07g017540","No alias","Solanum lycopersicum","LEU22441 LeRAD51","protein_coding" "Solyc07g053480","No alias","Solanum lycopersicum","Rab family GTPase (AHRD V3.3 *** D8RE14_SELML)","protein_coding" "Solyc07g053820","No alias","Solanum lycopersicum","Mad3/BUB1 homology region 1 (AHRD V3.3 *** A0A103XTQ9_CYNCS)","protein_coding" "Solyc07g064570","No alias","Solanum lycopersicum","Rho GTPase-activating 32 (AHRD V3.3 *** A0A0B0PG63_GOSAR)","protein_coding" "Solyc08g015990","No alias","Solanum lycopersicum","Golgi to ER traffic 4 (AHRD V3.3 *** A0A0B0NU26_GOSAR)","protein_coding" "Solyc08g041890","No alias","Solanum lycopersicum","Importin subunit alpha (AHRD V3.3 *** K4CK49_SOLLC)","protein_coding" "Solyc08g043140","No alias","Solanum lycopersicum","Calcium-dependent ARF-type GTPase activating protein family (AHRD V3.3 *** AT3G07940.1)","protein_coding" "Solyc08g044400","No alias","Solanum lycopersicum","SacI-like domain protein/WW domain protein (AHRD V3.3 *** G7JNP0_MEDTR)","protein_coding" "Solyc08g075160","No alias","Solanum lycopersicum","Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A0B2PXS6_GLYSO)","protein_coding" "Solyc08g076460","No alias","Solanum lycopersicum","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 (AHRD V3.3 *** DAD1_SOLLC)","protein_coding" "Solyc08g077690","No alias","Solanum lycopersicum","Chromatin remodeling 31, putative (AHRD V3.3 *** A0A061FRH7_THECC)","protein_coding" "Solyc08g078320","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase HOS1 (AHRD V3.3 *** G7JXE3_MEDTR)","protein_coding" "Solyc08g078390","No alias","Solanum lycopersicum","peroxisomal acyl-CoA oxidase 1A","protein_coding" "Solyc08g083270","No alias","Solanum lycopersicum","Hop-interacting protein THI143 (AHRD V3.3 *** G8Z252_SOLLC)","protein_coding" "Solyc09g007390","No alias","Solanum lycopersicum","DNAJ protein, putative, expressed (AHRD V3.3 *** Q10DG4_ORYSJ)","protein_coding" "Solyc09g008380","No alias","Solanum lycopersicum","Pectate lyase (AHRD V3.3 *** K4CQM6_SOLLC)","protein_coding" "Solyc09g009290","No alias","Solanum lycopersicum","Ankyrin repeat family protein (AHRD V3.3 *** AT5G40160.1)","protein_coding" "Solyc09g010060","No alias","Solanum lycopersicum","Kinesin-related protein (AHRD V3.3 *** A0A0B0NF68_GOSAR)","protein_coding" "Solyc09g010600","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc09g014250","No alias","Solanum lycopersicum","MYB transcription factor (AHRD V3.3 *** Q66RN1_HEVBR)","protein_coding" "Solyc09g018690","No alias","Solanum lycopersicum","ATP-dependent DNA helicase RecQ (AHRD V3.3 *** A0A072UZI8_MEDTR)","protein_coding" "Solyc09g018710","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc09g059440","No alias","Solanum lycopersicum","LOW QUALITY:Cell division control protein 45-like protein (AHRD V3.3 *** W9RYN1_9ROSA)","protein_coding" "Solyc09g066100","No alias","Solanum lycopersicum","Histone H1 (AHRD V3.3 *** H1_SOLLC)","protein_coding" "Solyc09g074300","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** K4CV07_SOLLC)","protein_coding" "Solyc09g082500","No alias","Solanum lycopersicum","Tesmin/TSO1-like CXC domain protein (AHRD V3.3 *** G7K3P9_MEDTR)","protein_coding" "Solyc09g082710","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC)","protein_coding" "Solyc09g083380","No alias","Solanum lycopersicum","Histone H1 (AHRD V3.3 *-* H1_MAIZE)","protein_coding" "Solyc09g090340","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G14310.1)","protein_coding" "Solyc09g090440","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y2G7_CYNCS)","protein_coding" "Solyc10g005530","No alias","Solanum lycopersicum","ABH1 (AHRD V3.3 *** A0A097PNP2_SOLLC)","protein_coding" "Solyc10g005890","No alias","Solanum lycopersicum","DNA damage-inducible protein 1 (AHRD V3.3 *** A0A0B2RHB2_GLYSO)","protein_coding" "Solyc10g006560","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH)","protein_coding" "Solyc10g008910","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)","protein_coding" "Solyc10g049420","No alias","Solanum lycopersicum","TRAF-like superfamily protein (AHRD V3.3 --* AT5G52330.4)","protein_coding" "Solyc10g079730","No alias","Solanum lycopersicum","Condensin complex subunit 1 (AHRD V3.3 *** K4D2L4_SOLLC)","protein_coding" "Solyc10g080110","No alias","Solanum lycopersicum","Cytoplasmic tRNA 2-thiolation protein 2 (AHRD V3.3 *-* K4D2Q2_SOLLC)","protein_coding" "Solyc10g080330","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S1X9_RICCO)","protein_coding" "Solyc10g080400","No alias","Solanum lycopersicum","Uv-b-insensitive 4, putative (AHRD V3.3 *** A0A061EX89_THECC)","protein_coding" "Solyc10g080420","No alias","Solanum lycopersicum","C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072TGP1_MEDTR)","protein_coding" "Solyc10g080880","No alias","Solanum lycopersicum","SlPIN7","protein_coding" "Solyc10g086210","No alias","Solanum lycopersicum","Translin family protein (AHRD V3.3 *** AT2G37020.3)","protein_coding" "Solyc11g005000","No alias","Solanum lycopersicum","Keratinocytes-associated protein 2 (AHRD V3.3 *** B6SJ34_MAIZE)","protein_coding" "Solyc11g005820","No alias","Solanum lycopersicum","Pectinesterase inhibitor (AHRD V3.3 *** A0A103Y9H8_CYNCS)","protein_coding" "Solyc11g007850","No alias","Solanum lycopersicum","DNA binding protein (AHRD V3.3 *-* AT3G52170.4)","protein_coding" "Solyc11g007920","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4D553_SOLLC)","protein_coding" "Solyc11g007930","No alias","Solanum lycopersicum","Histone H2B (AHRD V3.3 *** K4D554_SOLLC)","protein_coding" "Solyc11g013260","No alias","Solanum lycopersicum","Prohibitin (AHRD V3.3 *** O04361_TOBAC)","protein_coding" "Solyc11g045380","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc11g066010","No alias","Solanum lycopersicum","ATP synthase subunit epsilon (AHRD V3.3 *** W9SG58_9ROSA)","protein_coding" "Solyc11g066160","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc11g066900","No alias","Solanum lycopersicum","Nucleobase-ascorbate transporter-like protein (AHRD V3.3 *** A0A072VC14_MEDTR)","protein_coding" "Solyc11g068910","No alias","Solanum lycopersicum","Methyl-CpG binding domain containing protein, expressed (AHRD V3.3 *-* Q2QM23_ORYSJ)","protein_coding" "Solyc11g072420","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc11g072840","No alias","Solanum lycopersicum","histone H4 (AHRD V3.3 *** AT2G28740.1)","protein_coding" "Solyc11g073250","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** K4DB31_SOLLC)","protein_coding" "Solyc12g005250","No alias","Solanum lycopersicum","Kinesin-like protein (AHRD V3.3 *** K4DB63_SOLLC)","protein_coding" "Solyc12g005270","No alias","Solanum lycopersicum","Histone H2A (AHRD V3.3 *** K4DB65_SOLLC)","protein_coding" "Solyc12g008580","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9RKF7_RICCO)","protein_coding" "Solyc12g019290","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A124SBF4_CYNCS)","protein_coding" "Solyc12g056540","No alias","Solanum lycopersicum","Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC)","protein_coding" "Solyc12g088470","No alias","Solanum lycopersicum","cyclin A3_4","protein_coding" "Solyc12g089290","No alias","Solanum lycopersicum","HVA22-like protein (AHRD V3.3 *** K4DH00_SOLLC)","protein_coding" "Solyc12g100330","No alias","Solanum lycopersicum","cytosine-5 DNA methyltransferase3L","protein_coding" "Sopen01g046350","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding" "Sopen08g023200","No alias","Solanum pennellii","HRDC domain","protein_coding" "Sopen09g012230","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"