"sequence_id","alias","species","description","type" "111970","No alias","Selaginella moellendorffii ","ATP12 protein-related","protein_coding" "233460","No alias","Selaginella moellendorffii ","high affinity K+ transporter 5","protein_coding" "233638","No alias","Selaginella moellendorffii ","nine-cis-epoxycarotenoid dioxygenase 5","protein_coding" "236556","No alias","Selaginella moellendorffii ","acyl activating enzyme 1","protein_coding" "33314","No alias","Selaginella moellendorffii ","Transmembrane amino acid transporter family protein","protein_coding" "416921","No alias","Selaginella moellendorffii ","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "418879","No alias","Selaginella moellendorffii ","Arabidopsis Hop2 homolog","protein_coding" "421194","No alias","Selaginella moellendorffii ","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "422344","No alias","Selaginella moellendorffii ","Phosphoglycerate mutase family protein","protein_coding" "426757","No alias","Selaginella moellendorffii ","Histone superfamily protein","protein_coding" "431375","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "440464","No alias","Selaginella moellendorffii ","Aldolase-type TIM barrel family protein","protein_coding" "445375","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "448644","No alias","Selaginella moellendorffii ","tornado 1","protein_coding" "79271","No alias","Selaginella moellendorffii ","WEE1 kinase homolog","protein_coding" "83967","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "85340","No alias","Selaginella moellendorffii ","like AUXIN RESISTANT 1","protein_coding" "A4A49_28444","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_61552","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "AC190609.3_FG002","No alias","Zea mays","Ribosomal L38e protein family","protein_coding" "AC206642.4_FG001","No alias","Zea mays","Ribosomal L29 family protein","protein_coding" "At1g01080","No alias","Arabidopsis thaliana","RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:F4HQH8]","protein_coding" "At1g07140","No alias","Arabidopsis thaliana","Ran-binding protein 1 homolog a [Source:UniProtKB/Swiss-Prot;Acc:Q9LMK7]","protein_coding" "At1g09815","No alias","Arabidopsis thaliana","POLD4 [Source:UniProtKB/TrEMBL;Acc:A0A178WHS7]","protein_coding" "At1g13060","No alias","Arabidopsis thaliana","20S proteasome beta subunit E1 [Source:UniProtKB/TrEMBL;Acc:F4HP14]","protein_coding" "At1g17490","No alias","Arabidopsis thaliana","At1g17490/F1L3_4 [Source:UniProtKB/TrEMBL;Acc:Q9LNQ6]","protein_coding" "At1g31940","No alias","Arabidopsis thaliana","At1g31940/F5M6.6 [Source:UniProtKB/TrEMBL;Acc:Q8VYV3]","protein_coding" "At1g49620","No alias","Arabidopsis thaliana","Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]","protein_coding" "At1g68430","No alias","Arabidopsis thaliana","At1g68430 [Source:UniProtKB/TrEMBL;Acc:Q9M9C8]","protein_coding" "At1g79610","No alias","Arabidopsis thaliana","Sodium/hydrogen exchanger 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU6]","protein_coding" "At2g20530","No alias","Arabidopsis thaliana","Prohibitin-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIL6]","protein_coding" "At2g26540","No alias","Arabidopsis thaliana","Uroporphyrinogen-III synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48721]","protein_coding" "At2g33450","No alias","Arabidopsis thaliana","PRPL28 [Source:UniProtKB/TrEMBL;Acc:A0A178VYG9]","protein_coding" "At2g36230","No alias","Arabidopsis thaliana","1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82782]","protein_coding" "At2g45070","No alias","Arabidopsis thaliana","Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178VTT1]","protein_coding" "At2g45350","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22137]","protein_coding" "At3g02570","No alias","Arabidopsis thaliana","PMI1 [Source:UniProtKB/TrEMBL;Acc:A0A178VN24]","protein_coding" "At3g04400","No alias","Arabidopsis thaliana","At2g33370 [Source:UniProtKB/TrEMBL;Acc:Q1H559]","protein_coding" "At3g18510","No alias","Arabidopsis thaliana","ATP-dependent helicase/nuclease subunit [Source:UniProtKB/TrEMBL;Acc:Q8GXY3]","protein_coding" "At3g45050","No alias","Arabidopsis thaliana","AT3G45050 protein [Source:UniProtKB/TrEMBL;Acc:B9DG54]","protein_coding" "At3g46110","No alias","Arabidopsis thaliana","At3g46110 [Source:UniProtKB/TrEMBL;Acc:Q8GY65]","protein_coding" "At3g47930","No alias","Arabidopsis thaliana","GLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]","protein_coding" "At3g48490","No alias","Arabidopsis thaliana","At3g48490 [Source:UniProtKB/TrEMBL;Acc:Q8LD28]","protein_coding" "At3g55440","No alias","Arabidopsis thaliana","Triosephosphate isomerase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48491]","protein_coding" "At4g14850","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g14850 [Source:UniProtKB/Swiss-Prot;Acc:Q0WSH6]","protein_coding" "At4g16430","No alias","Arabidopsis thaliana","Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]","protein_coding" "At4g29670","No alias","Arabidopsis thaliana","Thioredoxin-like 2-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCT3]","protein_coding" "At4g31985","No alias","Arabidopsis thaliana","60S ribosomal protein L39-1 [Source:UniProtKB/Swiss-Prot;Acc:P51424]","protein_coding" "At4g31990","No alias","Arabidopsis thaliana","Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]","protein_coding" "At4g37660","No alias","Arabidopsis thaliana","AT4g37660/F19F18_150 [Source:UniProtKB/TrEMBL;Acc:Q9SZF8]","protein_coding" "At5g08565","No alias","Arabidopsis thaliana","Transcription elongation factor SPT4 homolog [Source:UniProtKB/TrEMBL;Acc:A0A178UPE0]","protein_coding" "At5g14450","No alias","Arabidopsis thaliana","GDSL esterase/lipase At5g14450 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY84]","protein_coding" "At5g16230","No alias","Arabidopsis thaliana","Stearoyl-[acyl-carrier-protein] 9-desaturase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF05]","protein_coding" "At5g19020","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P0C8Q8]","protein_coding" "At5g26731","No alias","Arabidopsis thaliana","AT5g26741 [Source:UniProtKB/TrEMBL;Acc:Q94EW8]","protein_coding" "At5g28950","No alias","Arabidopsis thaliana","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (s /.../ NCBI BLink). [Source:TAIR;Acc:AT5G28950]","protein_coding" "At5g40660","No alias","Arabidopsis thaliana","AT5g40660/MNF13_180 [Source:UniProtKB/TrEMBL;Acc:Q94BY8]","protein_coding" "At5g47250","No alias","Arabidopsis thaliana","Probable disease resistance protein At5g47250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVT4]","protein_coding" "At5g60640","No alias","Arabidopsis thaliana","Protein disulfide-isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UQB2]","protein_coding" "At5g64816","No alias","Arabidopsis thaliana","Uncharacterized protein At5g64816 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q8]","protein_coding" "Bradi1g03800","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi1g08217","No alias","Brachypodium distachyon","Protein of unknown function, transmembrane-40","protein_coding" "Bradi1g16210","No alias","Brachypodium distachyon","SPFH/Band 7/PHB domain-containing membrane-associated protein family","protein_coding" "Bradi1g19710","No alias","Brachypodium distachyon","ATP12 protein-related","protein_coding" "Bradi1g28770","No alias","Brachypodium distachyon","ATP synthase D chain, mitochondrial","protein_coding" "Bradi1g31380","No alias","Brachypodium distachyon","homogentisate phytyltransferase 1","protein_coding" "Bradi1g36860","No alias","Brachypodium distachyon","SOUL heme-binding family protein","protein_coding" "Bradi1g38700","No alias","Brachypodium distachyon","PHD finger protein-related","protein_coding" "Bradi1g45747","No alias","Brachypodium distachyon","GRAM domain family protein","protein_coding" "Bradi1g49230","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g67450","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding" "Bradi2g00660","No alias","Brachypodium distachyon","peroxin 14","protein_coding" "Bradi2g05990","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding" "Bradi2g09120","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding" "Bradi2g10816","No alias","Brachypodium distachyon","Leucine-rich repeat (LRR) family protein","protein_coding" "Bradi2g11090","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding" "Bradi2g17974","No alias","Brachypodium distachyon","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Bradi2g23820","No alias","Brachypodium distachyon","G10 family protein","protein_coding" "Bradi2g31070","No alias","Brachypodium distachyon","saposin B domain-containing protein","protein_coding" "Bradi2g31100","No alias","Brachypodium distachyon","Transcription factor IIA, alpha/beta subunit","protein_coding" "Bradi2g42160","No alias","Brachypodium distachyon","Family of unknown function (DUF572)","protein_coding" "Bradi2g44460","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding" "Bradi2g47080","No alias","Brachypodium distachyon","Nucleotidylyl transferase superfamily protein","protein_coding" "Bradi2g47820","No alias","Brachypodium distachyon","Homeodomain-like/winged-helix DNA-binding family protein","protein_coding" "Bradi2g48830","No alias","Brachypodium distachyon","SNF1 kinase homolog 10","protein_coding" "Bradi2g51550","No alias","Brachypodium distachyon","LisH and RanBPM domains containing protein","protein_coding" "Bradi3g06620","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding" "Bradi3g07870","No alias","Brachypodium distachyon","Mob1/phocein family protein","protein_coding" "Bradi3g10190","No alias","Brachypodium distachyon","Tesmin/TSO1-like CXC domain-containing protein","protein_coding" "Bradi3g12820","No alias","Brachypodium distachyon","putative type 1 membrane protein","protein_coding" "Bradi3g22030","No alias","Brachypodium distachyon","acclimation of photosynthesis to environment","protein_coding" "Bradi3g24730","No alias","Brachypodium distachyon","gamma subunit of Mt ATP synthase","protein_coding" "Bradi3g40560","No alias","Brachypodium distachyon","DNA repair ATPase-related","protein_coding" "Bradi3g43900","No alias","Brachypodium distachyon","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding" "Bradi3g49600","No alias","Brachypodium distachyon","peroxin4","protein_coding" "Bradi3g52980","No alias","Brachypodium distachyon","histidinol phosphate aminotransferase 1","protein_coding" "Bradi3g57300","No alias","Brachypodium distachyon","TRF-like 6","protein_coding" "Bradi3g59030","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "Bradi4g02400","No alias","Brachypodium distachyon","MMS ZWEI homologue 3","protein_coding" "Bradi4g06980","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding" "Bradi4g16467","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g26920","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding" "Bradi4g33460","No alias","Brachypodium distachyon","Protein of unknown function (DUF1664)","protein_coding" "Bradi5g11300","No alias","Brachypodium distachyon","esterase/lipase/thioesterase family protein","protein_coding" "Bradi5g11360","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Brara.A01774.1","No alias","Brassica rapa","light-responsive regulatory protein *(SEP5)","protein_coding" "Brara.A01881.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & type-II arginine N-methyltransferase *(PRMT7)","protein_coding" "Brara.B00292.1","No alias","Brassica rapa","auxin signalling transcriptional co-repressor *(TPL/TPR) & transcriptional co-repressor *(TPL/TPR)","protein_coding" "Brara.B02617.1","No alias","Brassica rapa","class phi glutathione S-transferase","protein_coding" "Brara.C00904.1","No alias","Brassica rapa","regulatory component *(RPT6) of 26S proteasome","protein_coding" "Brara.C02845.1","No alias","Brassica rapa","S-adenosyl methionine synthetase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Brara.C03226.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C03714.1","No alias","Brassica rapa","ubiquitin-binding adaptor *(UFD3)","protein_coding" "Brara.D01086.1","No alias","Brassica rapa","chaperone involved in ATP synthase assembly *(ATP12)","protein_coding" "Brara.D02480.1","No alias","Brassica rapa","dihydroxyacetone phosphate reductase *(SFD1) & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Brara.D02682.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00902.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.E02649.1","No alias","Brassica rapa","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.F00314.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F00565.1","No alias","Brassica rapa","monosaccharide transporter *(ERD6)","protein_coding" "Brara.F00580.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F02176.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding" "Brara.G00893.1","No alias","Brassica rapa","scaffold component A of PP2A phosphatase complexes & scaffold component *(PP2A-phosphatase) of TTP preprophase band formation complex","protein_coding" "Brara.G02971.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.G03126.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01499.1","No alias","Brassica rapa","tRNA adenine-N6-methyltransferase","protein_coding" "Brara.H01966.1","No alias","Brassica rapa","regulatory component *(RPN6) of 26S proteasome","protein_coding" "Brara.H02138.1","No alias","Brassica rapa","EC_6.1 ligase forming carbon-oxygen bond & valine-tRNA ligase","protein_coding" "Brara.H02287.1","No alias","Brassica rapa","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I01165.1","No alias","Brassica rapa","core component *(NOP10) of H/ACA small nucleolar ribonucleoprotein (snoRNP) RNA pseudouridylation complex","protein_coding" "Brara.I02920.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03708.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I04403.1","No alias","Brassica rapa","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding" "Brara.I05627.1","No alias","Brassica rapa","rRNA adenosine dimethylase *(PFC)","protein_coding" "Brara.J00035.1","No alias","Brassica rapa","cutin sn-glycerol-3-phosphate acyltransferase & glycerol-3-phosphate acyltransferase *(GPAT4-8)","protein_coding" "Brara.J00263.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00738.1","No alias","Brassica rapa","zinc metalloprotease *(OMA1)","protein_coding" "Brara.J00921.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J02648.1","No alias","Brassica rapa","component *(SR-beta) of SRP (signal recognition particle) receptor complex","protein_coding" "Brara.J02705.1","No alias","Brassica rapa","calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding" "Brara.K00270.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Cre01.g012244","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g077200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g115650","No alias","Chlamydomonas reinhardtii","Aldolase superfamily protein","protein_coding" "Cre03.g206450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g240800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g282826","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g292100","No alias","Chlamydomonas reinhardtii","putrescine-binding periplasmic protein-related","protein_coding" "Cre07.g315100","No alias","Chlamydomonas reinhardtii","Thioredoxin superfamily protein","protein_coding" "Cre07.g325755","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g333900","No alias","Chlamydomonas reinhardtii","Cox19-like CHCH family protein","protein_coding" "Cre09.g409150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre11.g476900","No alias","Chlamydomonas reinhardtii","TATA-binding related factor (TRF) of subunit 20 of Mediator complex","protein_coding" "Cre12.g514300","No alias","Chlamydomonas reinhardtii","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein","protein_coding" "Cre12.g521050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g568800","No alias","Chlamydomonas reinhardtii","NADH-ubiquinone oxidoreductase-related","protein_coding" "Cre13.g584500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g606500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre14.g628350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g664250","No alias","Chlamydomonas reinhardtii","Pyridoxal-5\'-phosphate-dependent enzyme family protein","protein_coding" "Cre17.g699350","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Cre17.g726250","No alias","Chlamydomonas reinhardtii","ATP12 protein-related","protein_coding" "Cre17.g726300","No alias","Chlamydomonas reinhardtii","mitochondrial ribosomal protein S14","protein_coding" "Cre17.g730700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g747697","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "evm.model.contig_2024.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2039.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2042.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2114.9","No alias","Porphyridium purpureum","(at2g19870 : 202.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: methyltransferase activity, RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), RNA methyltransferase TrmH, group 3 (InterPro:IPR004441), RNA 2-O ribose methyltransferase, substrate binding (InterPro:IPR013123); Has 11661 Blast hits to 11576 proteins in 2636 species: Archae - 7; Bacteria - 7686; Metazoa - 749; Fungi - 216; Plants - 206; Viruses - 3; Other Eukaryotes - 2794 (source: NCBI BLink). & (reliability: 404.0) & (original description: no original description)","protein_coding" "evm.model.contig_2139.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2140.1","No alias","Porphyridium purpureum","(at5g26880 : 95.9) AGAMOUS-like 26; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537). & (reliability: 191.8) & (original description: no original description)","protein_coding" "evm.model.contig_2190.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2289.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2364.1","No alias","Porphyridium purpureum","(at1g20575 : 262.0) Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT2G39630.1); Has 22705 Blast hits to 22656 proteins in 2589 species: Archae - 933; Bacteria - 16103; Metazoa - 288; Fungi - 260; Plants - 98; Viruses - 23; Other Eukaryotes - 5000 (source: NCBI BLink). & (reliability: 524.0) & (original description: no original description)","protein_coding" "evm.model.contig_2504.1","No alias","Porphyridium purpureum","(at1g34065 : 156.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.contig_2505.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2621.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3384.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3385.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3403.3","No alias","Porphyridium purpureum","(at2g16600 : 201.0) Encodes cytosolic cyclophilin ROC3.; rotamase CYP 3 (ROC3); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 12245 Blast hits to 12232 proteins in 1905 species: Archae - 88; Bacteria - 3660; Metazoa - 2934; Fungi - 1299; Plants - 1235; Viruses - 4; Other Eukaryotes - 3025 (source: NCBI BLink). & (q39613|cyph_catro : 198.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 402.0) & (original description: no original description)","protein_coding" "evm.model.contig_3441.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3442.9","No alias","Porphyridium purpureum","(at5g08530 : 591.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (reliability: 1182.0) & (original description: no original description)","protein_coding" "evm.model.contig_3471.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3500.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3508.2","No alias","Porphyridium purpureum","(at5g51540 : 334.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT1G67690.1); Has 5499 Blast hits to 5482 proteins in 1556 species: Archae - 6; Bacteria - 3417; Metazoa - 330; Fungi - 489; Plants - 134; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink). & (reliability: 668.0) & (original description: no original description)","protein_coding" "evm.model.contig_3522.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3525.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3525.3","No alias","Porphyridium purpureum","(at5g40660 : 112.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)","protein_coding" "evm.model.contig_433.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4407.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4429.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4445.7","No alias","Porphyridium purpureum","(at4g38890 : 367.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (reliability: 734.0) & (original description: no original description)","protein_coding" "evm.model.contig_4491.13","No alias","Porphyridium purpureum","(at1g48175 : 92.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description)","protein_coding" "evm.model.contig_4506.4","No alias","Porphyridium purpureum","(at4g24040 : 240.0) Encodes a trehalase, member of Glycoside Hydrolase Family 37.; trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)","protein_coding" "evm.model.contig_4512.5","No alias","Porphyridium purpureum","(at5g57590 : 516.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1032.0) & (original description: no original description)","protein_coding" "evm.model.contig_4544.2","No alias","Porphyridium purpureum","(at5g54750 : 180.0) Transport protein particle (TRAPP) component; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Bet3 (InterPro:IPR016721). & (reliability: 360.0) & (original description: no original description)","protein_coding" "evm.model.contig_472.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_477.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_568.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_606.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_618.4","No alias","Porphyridium purpureum","(at1g80600 : 295.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (p31593|gsa_tobac : 94.7) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Nicotiana tabacum (Common tobacco) & (reliability: 590.0) & (original description: no original description)","protein_coding" "evm.model.contig_693.10","No alias","Porphyridium purpureum","(at2g03690 : 169.0) Ubiquinone biosynthesis protein COQ4 homolog.; coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)","protein_coding" "evm.model.contig_717.2","No alias","Porphyridium purpureum","(at5g60620 : 350.0) Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation.; glycerol-3-phosphate acyltransferase 9 (GPAT9); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G80950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 700.0) & (original description: no original description)","protein_coding" "evm.model.contig_724.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_754.1","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 210.0) no description available & (at4g14780 : 110.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G22750.1); Has 129366 Blast hits to 127977 proteins in 4864 species: Archae - 140; Bacteria - 14193; Metazoa - 48715; Fungi - 11899; Plants - 33617; Viruses - 635; Other Eukaryotes - 20167 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (gnl|cdd|37260 : 87.4) no description available & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00000113.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000241.108","No alias","Cyanophora paradoxa","(at1g17280 : 149.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "evm.model.tig00000254.122","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.123","No alias","Cyanophora paradoxa","(at4g14000 : 107.0) Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G43320.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.tig00000319.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000334.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000553.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000553.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000605.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000640.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000655.56","No alias","Cyanophora paradoxa","(at5g60730 : 86.3) Anion-transporting ATPase; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2815 Blast hits to 2379 proteins in 780 species: Archae - 173; Bacteria - 1911; Metazoa - 144; Fungi - 222; Plants - 104; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink). & (reliability: 172.6) & (original description: no original description)","protein_coding" "evm.model.tig00000718.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000767.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000767.8","No alias","Cyanophora paradoxa","(at4g08320 : 107.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.tig00000769.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000802.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000808.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000821.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000826.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000870.6","No alias","Cyanophora paradoxa","(at5g37500 : 207.0) Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 119.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 414.0) & (original description: no original description)","protein_coding" "evm.model.tig00000882.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000900.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000981.19","No alias","Cyanophora paradoxa","(at1g18180 : 124.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G73650.3); Has 2065 Blast hits to 2065 proteins in 348 species: Archae - 0; Bacteria - 501; Metazoa - 79; Fungi - 152; Plants - 110; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)","protein_coding" "evm.model.tig00000989.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001003.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001038.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001052.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001110.8","No alias","Cyanophora paradoxa","(at5g67220 : 261.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.tig00001127.32","No alias","Cyanophora paradoxa","(at5g50850 : 88.2) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description)","protein_coding" "evm.model.tig00001128.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001160.14","No alias","Cyanophora paradoxa","(at5g58240 : 139.0) Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.; FRAGILE HISTIDINE TRIAD (FHIT); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "evm.model.tig00001264.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001371.13","No alias","Cyanophora paradoxa","(p29409|pgkh_spiol : 275.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) (Fragment) - Spinacia oleracea (Spinach) & (at1g56190 : 265.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "evm.model.tig00001408.9","No alias","Cyanophora paradoxa","(at5g17770 : 158.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p39866|nia2_phavu : 138.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 316.0) & (original description: no original description)","protein_coding" "evm.model.tig00001471.14","No alias","Cyanophora paradoxa","(at5g40660 : 80.5) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "evm.model.tig00001493.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.286","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020614.28","No alias","Cyanophora paradoxa","(at2g31060 : 269.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (reliability: 538.0) & (original description: no original description)","protein_coding" "evm.model.tig00020614.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.21","No alias","Cyanophora paradoxa","(at2g03730 : 95.9) Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.; ACT domain repeat 5 (ACR5); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description)","protein_coding" "evm.model.tig00020660.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020704.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.170","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020911.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021072.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.49","No alias","Cyanophora paradoxa","(at5g20040 : 204.0) Encodes tRNA isopentenyltransferase AtIPT9.; isopentenyltransferase 9 (IPT9); FUNCTIONS IN: tRNA dimethylallyltransferase activity, ATP binding; INVOLVED IN: tRNA processing, cytokinin biosynthetic process; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA delta(2)-isopentenylpyrophosphate transferase (InterPro:IPR018022), tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 1 (TAIR:AT1G68460.1). & (reliability: 408.0) & (original description: no original description)","protein_coding" "evm.model.tig00021127.82","No alias","Cyanophora paradoxa","(at1g03000 : 177.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (p54774|cdc48_soybn : 156.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.tig00021137.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021168.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021275.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021428.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021571.37","No alias","Cyanophora paradoxa","(o04016|p5cr_actch : 259.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Actinidia chinensis (Kiwi) (Yangtao) & (at5g14800 : 252.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (reliability: 504.0) & (original description: no original description)","protein_coding" "evm.model.tig00021589.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021759.14","No alias","Cyanophora paradoxa","(at1g44790 : 128.0) ChaC-like family protein; CONTAINS InterPro DOMAIN/s: ChaC-like protein (InterPro:IPR006840); BEST Arabidopsis thaliana protein match is: ChaC-like family protein (TAIR:AT4G31290.1); Has 1621 Blast hits to 1621 proteins in 610 species: Archae - 0; Bacteria - 916; Metazoa - 235; Fungi - 131; Plants - 128; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)","protein_coding" "Glyma.01G080400","No alias","Glycine max","Thioesterase superfamily protein","protein_coding" "Glyma.03G200000","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "Glyma.04G252400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G253300","No alias","Glycine max","Ribosomal protein S13/S18 family","protein_coding" "Glyma.06G015800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G034600","No alias","Glycine max","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding" "Glyma.06G066400","No alias","Glycine max","Protein of unknown function (DUF2012)","protein_coding" "Glyma.07G010800","No alias","Glycine max","calcineurin B-like protein 10","protein_coding" "Glyma.10G285300","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.11G241800","No alias","Glycine max","Histone superfamily protein","protein_coding" "Glyma.12G143400","No alias","Glycine max","UDP-glucuronic acid decarboxylase 1","protein_coding" "Glyma.13G159600","No alias","Glycine max","Calcium-binding EF-hand family protein","protein_coding" "Glyma.13G239500","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.14G008300","No alias","Glycine max","Sterile alpha motif (SAM) domain-containing protein","protein_coding" "Glyma.15G054900","No alias","Glycine max","DNA methyltransferase-2","protein_coding" "Glyma.16G066000","No alias","Glycine max","ATP12 protein-related","protein_coding" "GRMZM2G003172","No alias","Zea mays","ATP12 protein-related","protein_coding" "GRMZM2G007188","No alias","Zea mays","ADP-ribosylation factor-like A1C","protein_coding" "GRMZM2G010196","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G022453","No alias","Zea mays","Ribosomal protein L18ae family","protein_coding" "GRMZM2G023148","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G031107","No alias","Zea mays","glucose-6-phosphate dehydrogenase 6","protein_coding" "GRMZM2G036365","No alias","Zea mays","Eukaryotic aspartyl protease family protein","protein_coding" "GRMZM2G044137","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding" "GRMZM2G045234","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding" "GRMZM2G046508","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G056373","No alias","Zea mays","nuclear encoded CLP protease 5","protein_coding" "GRMZM2G071745","No alias","Zea mays","cytochrome B5 isoform A","protein_coding" "GRMZM2G077079","No alias","Zea mays","N2,N2-dimethylguanosine tRNA methyltransferase","protein_coding" "GRMZM2G079196","No alias","Zea mays","proteasome family protein","protein_coding" "GRMZM2G084429","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G093574","No alias","Zea mays","Ribosomal protein S21e","protein_coding" "GRMZM2G098335","No alias","Zea mays","Alba DNA/RNA-binding protein","protein_coding" "GRMZM2G100225","No alias","Zea mays","Ribosomal protein L30/L7 family protein","protein_coding" "GRMZM2G103258","No alias","Zea mays","SIGNAL PEPTIDE PEPTIDASE-LIKE 1","protein_coding" "GRMZM2G108277","No alias","Zea mays","mRNA splicing factor, thioredoxin-like U5 snRNP","protein_coding" "GRMZM2G115750","No alias","Zea mays","putative type 1 membrane protein","protein_coding" "GRMZM2G115925","No alias","Zea mays","Small nuclear ribonucleoprotein family protein","protein_coding" "GRMZM2G116204","No alias","Zea mays","endoplasmic reticulum auxin binding protein 1","protein_coding" "GRMZM2G118808","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G119546","No alias","Zea mays","protein phosphatase 2A-2","protein_coding" "GRMZM2G132804","No alias","Zea mays","proteasome family protein","protein_coding" "GRMZM2G134109","No alias","Zea mays","Ribosomal protein S21e","protein_coding" "GRMZM2G138053","No alias","Zea mays","SNARE-like superfamily protein","protein_coding" "GRMZM2G138205","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G139041","No alias","Zea mays","non-specific phospholipase C1","protein_coding" "GRMZM2G140116","No alias","Zea mays","Ribosomal protein L14","protein_coding" "GRMZM2G141499","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G143955","No alias","Zea mays","fatA acyl-ACP thioesterase","protein_coding" "GRMZM2G150478","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G153416","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G166963","No alias","Zea mays","Ribosomal protein L34e superfamily protein","protein_coding" "GRMZM2G176397","No alias","Zea mays","aconitase 3","protein_coding" "GRMZM2G177151","No alias","Zea mays","Cox19-like CHCH family protein","protein_coding" "GRMZM2G180076","No alias","Zea mays","metallopeptidase M24 family protein","protein_coding" "GRMZM2G181273","No alias","Zea mays","Peptidase M20/M25/M40 family protein","protein_coding" "GRMZM2G363460","No alias","Zea mays","peroxin 14","protein_coding" "GRMZM2G410757","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G411764","No alias","Zea mays","Ribosomal protein L39 family protein","protein_coding" "GRMZM2G428765","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G467686","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding" "GRMZM2G546081","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding" "GRMZM5G800835","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G809636","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G833660","No alias","Zea mays","Peptidase S24/S26A/S26B/S26C family protein","protein_coding" "GRMZM5G856734","No alias","Zea mays","membrane steroid binding protein 1","protein_coding" "GRMZM5G860874","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G864239","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G877019","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G884287","No alias","Zea mays","Function unknown","protein_coding" "HORVU0Hr1G001340.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU0Hr1G023200.1","No alias","Hordeum vulgare","LysM protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU1Hr1G035600.1","No alias","Hordeum vulgare","TATA-box-binding component of TFIId basal transcription regulation complex & TATA-box-binding protein of RNA polymerase III-dependent transcription","protein_coding" "HORVU1Hr1G037580.2","No alias","Hordeum vulgare","chaperone involved in ATP synthase assembly *(ATP12)","protein_coding" "HORVU1Hr1G065100.2","No alias","Hordeum vulgare","sugar efflux transporter *(SWEET)","protein_coding" "HORVU2Hr1G001370.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G025320.2","No alias","Hordeum vulgare","chaperone involved in ATP synthase assembly *(ATP12)","protein_coding" "HORVU2Hr1G050140.8","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G056170.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G018230.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G024640.2","No alias","Hordeum vulgare","regulatory factor *(DG1) of plastid-encoded RNA polymerase activity","protein_coding" "HORVU3Hr1G070690.1","No alias","Hordeum vulgare","hexokinase","protein_coding" "HORVU4Hr1G081940.3","No alias","Hordeum vulgare","OPC-8","protein_coding" "HORVU5Hr1G078630.1","No alias","Hordeum vulgare","NADPH-oxidase *(Rboh)","protein_coding" "HORVU5Hr1G088810.1","No alias","Hordeum vulgare","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding" "HORVU5Hr1G118870.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G010300.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G058230.6","No alias","Hordeum vulgare","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU7Hr1G070140.7","No alias","Hordeum vulgare","regulatory protein *(SCAMP) of exocytic trafficking","protein_coding" "HORVU7Hr1G079510.5","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G099800.5","No alias","Hordeum vulgare","dihydroneopterin aldolase","protein_coding" "HORVU7Hr1G108730.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G118020.3","No alias","Hordeum vulgare","A1-class (Pepsin) protease","protein_coding" "Kfl00006_0100","kfl00006_0100_v1.1","Klebsormidium nitens","(at1g77680 : 558.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (reliability: 1116.0) & (original description: no original description)","protein_coding" "Kfl00013_0550","kfl00013_0550_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00029_0150","kfl00029_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00032_0320","kfl00032_0320_v1.1","Klebsormidium nitens","(at4g26870 : 580.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aspartate-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G31180.2); Has 28683 Blast hits to 22852 proteins in 2993 species: Archae - 454; Bacteria - 19619; Metazoa - 777; Fungi - 1015; Plants - 410; Viruses - 0; Other Eukaryotes - 6408 (source: NCBI BLink). & (q6f2u9|syk_orysa : 99.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1160.0) & (original description: no original description)","protein_coding" "Kfl00041_0210","kfl00041_0210_v1.1","Klebsormidium nitens","(at4g18810 : 602.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1). & (reliability: 1204.0) & (original description: no original description)","protein_coding" "Kfl00042_0185","kfl00042_0185_v1.1","Klebsormidium nitens","(at1g01220 : 186.0) Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.; L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)","protein_coding" "Kfl00042_0210","kfl00042_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00059_0330","kfl00059_0330_v1.1","Klebsormidium nitens","(at3g14980 : 157.0) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2); Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1; Bacteria - 6; Metazoa - 3256; Fungi - 362; Plants - 697; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). & (reliability: 300.0) & (original description: no original description)","protein_coding" "Kfl00063_g2","kfl00063_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00080_0080","kfl00080_0080_v1.1","Klebsormidium nitens","(at1g75270 : 247.0) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)","protein_coding" "Kfl00090_0290","kfl00090_0290_v1.1","Klebsormidium nitens","(at5g26340 : 584.0) Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.; MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41144|stc_ricco : 523.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1168.0) & (original description: no original description)","protein_coding" "Kfl00120_0040","kfl00120_0040_v1.1","Klebsormidium nitens",""(at1g69500 : 396.0) Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers. Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis.; ""cytochrome P450, family 704, subfamily B, polypeptide 1"" (CYP704B1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 24652 Blast hits to 24553 proteins in 1381 species: Archae - 44; Bacteria - 2338; Metazoa - 9085; Fungi - 5048; Plants - 7257; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (q43078|c97b1_pea : 122.0) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 792.0) & (original description: no original description)"","protein_coding" "Kfl00134_0130","kfl00134_0130_v1.1","Klebsormidium nitens","(at1g61040 : 201.0) Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.; vernalization independence 5 (VIP5); FUNCTIONS IN: DNA binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, negative regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plus-3 domain, subgroup (InterPro:IPR018144), Plus-3 (InterPro:IPR004343); Has 7244 Blast hits to 3723 proteins in 490 species: Archae - 2; Bacteria - 3364; Metazoa - 2087; Fungi - 627; Plants - 250; Viruses - 32; Other Eukaryotes - 882 (source: NCBI BLink). & (reliability: 402.0) & (original description: no original description)","protein_coding" "Kfl00191_0080","kfl00191_0080_v1.1","Klebsormidium nitens","(at1g65230 : 233.0) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); Has 45 Blast hits to 45 proteins in 18 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description)","protein_coding" "Kfl00212_0140","kfl00212_0140_v1.1","Klebsormidium nitens","(at2g23740 : 130.0) nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin modification; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), SET domain (InterPro:IPR001214), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1). & (reliability: 260.0) & (original description: no original description)","protein_coding" "Kfl00233_0185","kfl00233_0185_v1.1","Klebsormidium nitens","(at3g50380 : 388.0) INVOLVED IN: protein localization; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); Has 365 Blast hits to 355 proteins in 118 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 111; Plants - 61; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 776.0) & (original description: no original description)","protein_coding" "Kfl00236_0130","kfl00236_0130_v1.1","Klebsormidium nitens","(at5g52440 : 140.0) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB; HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: protein import into chloroplast thylakoid membrane; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G28750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "Kfl00247_0100","kfl00247_0100_v1.1","Klebsormidium nitens","(at5g40660 : 181.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)","protein_coding" "Kfl00285_0140","kfl00285_0140_v1.1","Klebsormidium nitens","(at3g57380 : 139.0) Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT2G41640.1); Has 645 Blast hits to 645 proteins in 97 species: Archae - 0; Bacteria - 36; Metazoa - 169; Fungi - 16; Plants - 385; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 278.0) & (original description: no original description)","protein_coding" "Kfl00296_0030","kfl00296_0030_v1.1","Klebsormidium nitens","(at1g54520 : 213.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)","protein_coding" "Kfl00338_0110","kfl00338_0110_v1.1","Klebsormidium nitens","(at5g14250 : 342.0) Encodes subunit 3 of the COP9 signalosome.; CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 402 Blast hits to 401 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 218; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 684.0) & (original description: no original description)","protein_coding" "Kfl00368_0180","kfl00368_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00369_0070","kfl00369_0070_v1.1","Klebsormidium nitens","(at2g03500 : 168.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401; Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description)","protein_coding" "Kfl00431_0050","kfl00431_0050_v1.1","Klebsormidium nitens","(at3g49210 : 174.0) O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description)","protein_coding" "Kfl00440_0050","kfl00440_0050_v1.1","Klebsormidium nitens","(at5g11700 : 501.0) BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink). & (reliability: 1002.0) & (original description: no original description)","protein_coding" "Kfl00455_0030","kfl00455_0030_v1.1","Klebsormidium nitens","(at3g55730 : 174.0) putative transcription factor MYB109 (MYB109) mRNA,; myb domain protein 109 (MYB109); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 25 (TAIR:AT2G39880.1); Has 8907 Blast hits to 7929 proteins in 513 species: Archae - 0; Bacteria - 2; Metazoa - 870; Fungi - 593; Plants - 5452; Viruses - 6; Other Eukaryotes - 1984 (source: NCBI BLink). & (p93417|gam1_orysa : 108.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: no original description)","protein_coding" "Kfl00509_0020","kfl00509_0020_v1.1","Klebsormidium nitens","(at5g10980 : 265.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 263.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 530.0) & (original description: no original description)","protein_coding" "Kfl00512_0050","kfl00512_0050_v1.1","Klebsormidium nitens","(at5g08650 : 881.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe64|efgm_orysa : 105.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 1762.0) & (original description: no original description)","protein_coding" "Kfl00643_0070","kfl00643_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00701_0030","kfl00701_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00788_0020","kfl00788_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g09740","No alias","Oryza sativa","F-box/LRR-repeat protein, putative, expressed","protein_coding" "LOC_Os01g12910","No alias","Oryza sativa","thioesterase family protein, putative, expressed","protein_coding" "LOC_Os01g13550","No alias","Oryza sativa","beta-amylase, putative, expressed","protein_coding" "LOC_Os01g14040","No alias","Oryza sativa","D-tyrosyl-tRNA, putative, expressed","protein_coding" "LOC_Os01g23630","No alias","Oryza sativa","transcription initiation factor IID, 18kD subunit family protein, expressed","protein_coding" "LOC_Os01g33260","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os01g64410","No alias","Oryza sativa","ATOFP18/OFP18, putative, expressed","protein_coding" "LOC_Os02g07700","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g10360","No alias","Oryza sativa","MONOCULM 1, putative, expressed","protein_coding" "LOC_Os02g13650","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g19410","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g35830","No alias","Oryza sativa","extracellular ligand-gated ion channel, putative, expressed","protein_coding" "LOC_Os02g37109","No alias","Oryza sativa","vegetative cell wall protein gp1 precursor, putative, expressed","protein_coding" "LOC_Os02g37750","No alias","Oryza sativa","lecithine cholesterol acyltransferase, putative, expressed","protein_coding" "LOC_Os02g44090","No alias","Oryza sativa","zinc finger protein, putative, expressed","protein_coding" "LOC_Os02g48500","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os02g58200","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g09310","No alias","Oryza sativa","frigida, putative, expressed","protein_coding" "LOC_Os03g11250","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g16270","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g16580","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g30620","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g43020","No alias","Oryza sativa","prefoldin subunit, putative, expressed","protein_coding" "LOC_Os03g56470","No alias","Oryza sativa","protein kinase family protein, putative, expressed","protein_coding" "LOC_Os03g60800","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os04g18130","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g42280","No alias","Oryza sativa","CorA-like magnesium transporter protein, putative, expressed","protein_coding" "LOC_Os04g54350","No alias","Oryza sativa","SPRY-domain containing protein, putative, expressed","protein_coding" "LOC_Os04g54410","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g09420","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os05g18650","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g39400","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g45030","No alias","Oryza sativa","calcium homeostasis regulator CHoR1, putative, expressed","protein_coding" "LOC_Os06g11040","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g22290","No alias","Oryza sativa","legume lectins beta domain containing protein, expressed","protein_coding" "LOC_Os06g28950","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g40415","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g02690","No alias","Oryza sativa","DUF538 domain containing protein, putative, expressed","protein_coding" "LOC_Os07g32450","No alias","Oryza sativa","protein kinase PKN/PRK1, effector, putative, expressed","protein_coding" "LOC_Os07g38990","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g40320","No alias","Oryza sativa","vesicle transport protein GOT1B, putative, expressed","protein_coding" "LOC_Os07g43020","No alias","Oryza sativa","TRM112, putative, expressed","protein_coding" "LOC_Os07g44940","No alias","Oryza sativa","ATP12 ATPase, putative, expressed","protein_coding" "LOC_Os07g46400","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g47760","No alias","Oryza sativa","POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed","protein_coding" "LOC_Os07g48244","No alias","Oryza sativa","ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed","protein_coding" "LOC_Os07g49020","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os08g01760","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding" "LOC_Os08g33830","No alias","Oryza sativa","polypyrimidine tract-binding protein, putative, expressed","protein_coding" "LOC_Os08g43460","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g03090","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g15540","No alias","Oryza sativa","OsFBX312 - F-box domain containing protein, expressed","protein_coding" "LOC_Os09g21740","No alias","Oryza sativa","armadillo/beta-catenin repeat family protein, putative, expressed","protein_coding" "LOC_Os09g23820","No alias","Oryza sativa","cytochrome P450 72A1, putative, expressed","protein_coding" "LOC_Os09g30411","No alias","Oryza sativa","UBX domain-containing protein, putative, expressed","protein_coding" "LOC_Os09g36120","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g22670","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g23320","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g25780","No alias","Oryza sativa","FAD-linked oxidoreductase protein, putative, expressed","protein_coding" "LOC_Os10g30190","No alias","Oryza sativa","BTBP2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed","protein_coding" "LOC_Os11g04420","No alias","Oryza sativa","AIG2-like family domain containing protein, expressed","protein_coding" "LOC_Os11g05690","No alias","Oryza sativa","amino acid permease family protein, putative, expressed","protein_coding" "LOC_Os11g06150","No alias","Oryza sativa","basic proline-rich protein precursor, putative, expressed","protein_coding" "LOC_Os11g09329","No alias","Oryza sativa","VHS and GAT domain containing protein, expressed","protein_coding" "LOC_Os11g13820","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding" "LOC_Os11g19330","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding" "LOC_Os12g03060","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g10510","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g41956","No alias","Oryza sativa","galactosyltransferase family protein, putative, expressed","protein_coding" "Mp1g10260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g12620.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g16350.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g18960.1","No alias","Marchantia polymorpha","membrin group Qb-type SNARE protein","protein_coding" "Mp2g02160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g03160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g09040.1","No alias","Marchantia polymorpha","pyrrolidone-carboxylate peptidase","protein_coding" "Mp2g11050.1","No alias","Marchantia polymorpha","SEC22-type R-type SNARE longin protein","protein_coding" "Mp2g13410.1","No alias","Marchantia polymorpha","sterol delta8-delta7 isomerase","protein_coding" "Mp2g14330.1","No alias","Marchantia polymorpha","DNA topoisomerase 6 subunit B OS=Arabidopsis thaliana (sp|q9c5v6|top6b_arath : 913.0)","protein_coding" "Mp2g22060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g14560.1","No alias","Marchantia polymorpha","protein kinase (CDPK)","protein_coding" "Mp3g16040.1","No alias","Marchantia polymorpha","ATP12 chaperone involved in ATP synthase assembly","protein_coding" "Mp4g12390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g13390.1","No alias","Marchantia polymorpha","NAD kinase","protein_coding" "Mp4g18200.1","No alias","Marchantia polymorpha","component ORC1 of origin recognition complex","protein_coding" "Mp5g13260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g01110.1","No alias","Marchantia polymorpha","C-methyltransferase (COQ5)","protein_coding" "Mp6g11350.1","No alias","Marchantia polymorpha","Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 259.4)","protein_coding" "Mp7g17210.1","No alias","Marchantia polymorpha","UDP-D-glucuronic acid 4-epimerase","protein_coding" "Mp7g18020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g10750.1","No alias","Marchantia polymorpha","F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 199.0)","protein_coding" "Mp8g11730.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g16170.1","No alias","Marchantia polymorpha","transcriptional repressor (NF-X1)","protein_coding" "Mp8g16310.1","No alias","Marchantia polymorpha","peroxisomal long-chain acyl-CoA synthetase","protein_coding" "Potri.001G338200","No alias","Populus trichocarpa","ATP12 protein-related","protein_coding" "Pp1s104_142V6","No alias","Physcomitrella patens","T6C23.12; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s106_134V6","No alias","Physcomitrella patens","brix domain containing 2","protein_coding" "Pp1s108_187V6","No alias","Physcomitrella patens","lysyl-trna synthetase","protein_coding" "Pp1s109_198V6","No alias","Physcomitrella patens","btb poz domain-containing protein","protein_coding" "Pp1s114_147V6","No alias","Physcomitrella patens","F17L22.260; ATP-binding family protein [Arabidopsis thaliana]","protein_coding" "Pp1s126_190V6","No alias","Physcomitrella patens","elongation factor ts","protein_coding" "Pp1s130_285V6","No alias","Physcomitrella patens","alveolar soft part sarcoma chromosomecandidate 1","protein_coding" "Pp1s130_294V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s139_123V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s13_264V6","No alias","Physcomitrella patens","F4I10.100; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s142_6V6","No alias","Physcomitrella patens","cyclin delta-3","protein_coding" "Pp1s143_17V6","No alias","Physcomitrella patens","ubiquitin familyexpressed","protein_coding" "Pp1s149_61V6","No alias","Physcomitrella patens","acyl- oxidase","protein_coding" "Pp1s154_130V6","No alias","Physcomitrella patens","anthranilate synthase component","protein_coding" "Pp1s15_157V6","No alias","Physcomitrella patens","single-stranded dna-binding mitochondrial","protein_coding" "Pp1s169_74V6","No alias","Physcomitrella patens","pale cress protein","protein_coding" "Pp1s171_18V6","No alias","Physcomitrella patens","F8L10.2; stigma-specific Stig1 family protein [Arabidopsis thaliana]","protein_coding" "Pp1s193_26V6","No alias","Physcomitrella patens","metal-dependent phosphohydrolase hd domain-containing protein","protein_coding" "Pp1s212_26V6","No alias","Physcomitrella patens","similar to yeast nuclear segregation protein Bfr1 involved in Mitosis and Vesicular transport [Schizosaccharomyces pombe]","protein_coding" "Pp1s215_90V6","No alias","Physcomitrella patens","chromosome 14 open reading frame 169","protein_coding" "Pp1s219_66V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s240_100V6","No alias","Physcomitrella patens","nucleic acid binding","protein_coding" "Pp1s245_17V6","No alias","Physcomitrella patens","26s proteasome aaa-atpase subunit rpt6a","protein_coding" "Pp1s245_56V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s249_37V6","No alias","Physcomitrella patens","sucrose proton symporter","protein_coding" "Pp1s249_73V6","No alias","Physcomitrella patens","ribosomal protein l32","protein_coding" "Pp1s257_38V6","No alias","Physcomitrella patens","T12C14.30; zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]","protein_coding" "Pp1s294_14V6","No alias","Physcomitrella patens","T20K14.160; transducin / WD-40 repeat protein family [Arabidopsis thaliana]","protein_coding" "Pp1s301_8V6","No alias","Physcomitrella patens","tetratricopeptide repeat domain 4","protein_coding" "Pp1s324_9V6","No alias","Physcomitrella patens","ribonuclease p family protein","protein_coding" "Pp1s340_43V6","No alias","Physcomitrella patens","nucleosome chromatin assembly factor group a","protein_coding" "Pp1s343_46V6","No alias","Physcomitrella patens","atp synthase mitochondrial f1 complex assembly factor 2","protein_coding" "Pp1s358_58V6","No alias","Physcomitrella patens","atp-dependent rna helicase","protein_coding" "Pp1s38_256V6","No alias","Physcomitrella patens","aspartate carbamoyltransferase","protein_coding" "Pp1s39_118V6","No alias","Physcomitrella patens","unknown [Glycine max]","protein_coding" "Pp1s39_147V6","No alias","Physcomitrella patens","gtp-binding protein","protein_coding" "Pp1s3_300V6","No alias","Physcomitrella patens","ubiquitin specific peptidase 16","protein_coding" "Pp1s40_145V6","No alias","Physcomitrella patens","oxysterol-binding family protein","protein_coding" "Pp1s440_13V6","No alias","Physcomitrella patens","mitochondrial ribosomal protein l11","protein_coding" "Pp1s45_18V6","No alias","Physcomitrella patens","MDC12.24; hypothetical protein [Arabidopsis thaliana]","protein_coding" "Pp1s51_320V6","No alias","Physcomitrella patens","vacuolar atpase subunit h protein","protein_coding" "Pp1s52_54V6","No alias","Physcomitrella patens","myb transcription factor","protein_coding" "Pp1s57_70V6","No alias","Physcomitrella patens","glutamyl-trna cytoplasmic","protein_coding" "Pp1s66_116V6","No alias","Physcomitrella patens","dna-directed rna polymerase rna binding","protein_coding" "Pp1s79_223V6","No alias","Physcomitrella patens","hypothetical protein [Plasmodium falciparum 3D7]","protein_coding" "Pp1s79_95V6","No alias","Physcomitrella patens","ca2+ antiporter cation exchanger","protein_coding" "Pp1s91_142V6","No alias","Physcomitrella patens","guanine nucleotide binding protein 3","protein_coding" "Pp1s99_13V6","No alias","Physcomitrella patens","nudix family","protein_coding" "PSME_00000558-RA","No alias","Pseudotsuga menziesii","(at4g31120 : 839.0) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.; PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: positive regulation of vernalization response, regulation of flower development; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1678.0) & (original description: no original description)","protein_coding" "PSME_00001237-RA","No alias","Pseudotsuga menziesii","(at5g40660 : 290.0) ATP12 protein-related; INVOLVED IN: proton-transporting ATP synthase complex assembly; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP12, ATPase F1F0-assembly protein (InterPro:IPR011419); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)","protein_coding" "PSME_00002156-RA","No alias","Pseudotsuga menziesii","(at2g20280 : 446.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (reliability: 892.0) & (original description: no original description)","protein_coding" "PSME_00003541-RA","No alias","Pseudotsuga menziesii","(at3g48080 : 231.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)","protein_coding" "PSME_00003544-RA","No alias","Pseudotsuga menziesii","(at3g48080 : 241.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "PSME_00004828-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 573.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1146.0) & (original description: no original description)","protein_coding" "PSME_00006404-RA","No alias","Pseudotsuga menziesii","(at4g36630 : 575.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 1150.0) & (original description: no original description)","protein_coding" "PSME_00006932-RA","No alias","Pseudotsuga menziesii","(at3g01610 : 663.0) AAA-type ATPase - Over 90% homologous to CDC48a; cell division cycle 48C (CDC48C); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 65227 Blast hits to 39412 proteins in 3299 species: Archae - 1912; Bacteria - 27659; Metazoa - 8516; Fungi - 6329; Plants - 5583; Viruses - 58; Other Eukaryotes - 15170 (source: NCBI BLink). & (p54774|cdc48_soybn : 454.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1326.0) & (original description: no original description)","protein_coding" "PSME_00007481-RA","No alias","Pseudotsuga menziesii","(at3g44050 : 832.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 120776 Blast hits to 67955 proteins in 2875 species: Archae - 1602; Bacteria - 19178; Metazoa - 52262; Fungi - 9870; Plants - 7347; Viruses - 361; Other Eukaryotes - 30156 (source: NCBI BLink). & (p46869|fla10_chlre : 286.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 1664.0) & (original description: no original description)","protein_coding" "PSME_00008017-RA","No alias","Pseudotsuga menziesii","(at3g04610 : 419.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description)","protein_coding" "PSME_00010132-RA","No alias","Pseudotsuga menziesii","(at3g14910 : 172.0) unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)","protein_coding" "PSME_00010496-RA","No alias","Pseudotsuga menziesii","(at2g22070 : 627.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 137.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1254.0) & (original description: no original description)","protein_coding" "PSME_00010519-RA","No alias","Pseudotsuga menziesii","(at4g25730 : 721.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (reliability: 1442.0) & (original description: no original description)","protein_coding" "PSME_00011753-RA","No alias","Pseudotsuga menziesii","(at2g20190 : 1535.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 3070.0) & (original description: no original description)","protein_coding" "PSME_00011928-RA","No alias","Pseudotsuga menziesii","(at4g02750 : 355.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 680.0) & (original description: no original description)","protein_coding" "PSME_00013135-RA","No alias","Pseudotsuga menziesii","(at1g76940 : 116.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleotide binding;nucleic acid binding (TAIR:AT1G21320.1). & (reliability: 232.0) & (original description: no original description)","protein_coding" "PSME_00013272-RA","No alias","Pseudotsuga menziesii","(at1g20230 : 521.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23330.1); Has 43615 Blast hits to 14351 proteins in 266 species: Archae - 0; Bacteria - 17; Metazoa - 112; Fungi - 108; Plants - 42635; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink). & (q76c99|rf1_orysa : 138.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 984.0) & (original description: no original description)","protein_coding" "PSME_00016529-RA","No alias","Pseudotsuga menziesii","(at5g48740 : 459.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 385.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 860.0) & (original description: no original description)","protein_coding" "PSME_00016946-RA","No alias","Pseudotsuga menziesii","(at1g65730 : 860.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1550.0) & (original description: no original description)","protein_coding" "PSME_00017110-RA","No alias","Pseudotsuga menziesii","(at4g38890 : 607.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (reliability: 1214.0) & (original description: no original description)","protein_coding" "PSME_00025493-RA","No alias","Pseudotsuga menziesii","(at4g13730 : 267.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1). & (reliability: 534.0) & (original description: no original description)","protein_coding" "PSME_00027083-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00029479-RA","No alias","Pseudotsuga menziesii","(at2g31240 : 566.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G10840.1); Has 9091 Blast hits to 4783 proteins in 709 species: Archae - 186; Bacteria - 3199; Metazoa - 3809; Fungi - 509; Plants - 353; Viruses - 6; Other Eukaryotes - 1029 (source: NCBI BLink). & (reliability: 1132.0) & (original description: no original description)","protein_coding" "PSME_00037724-RA","No alias","Pseudotsuga menziesii","(at3g47520 : 231.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (q42972|mdhg_orysa : 198.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Oryza sativa (Rice) & (reliability: 462.0) & (original description: no original description)","protein_coding" "PSME_00037740-RA","No alias","Pseudotsuga menziesii","(at3g10870 : 255.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (q40708|pir7a_orysa : 146.0) Probable esterase PIR7A (EC 3.1.-.-) - Oryza sativa (Rice) & (reliability: 510.0) & (original description: no original description)","protein_coding" "PSME_00038713-RA","No alias","Pseudotsuga menziesii","(at4g17170 : 127.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (p49104|rab2b_maize : 127.0) Ras-related protein Rab-2-B - Zea mays (Maize) & (reliability: 254.0) & (original description: no original description)","protein_coding" "PSME_00042838-RA","No alias","Pseudotsuga menziesii","(at5g35200 : 153.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "PSME_00043100-RA","No alias","Pseudotsuga menziesii","(at5g20960 : 152.0) Encodes aldehyde oxidase AA01.; aldehyde oxidase 1 (AAO1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 2 (TAIR:AT3G43600.1); Has 18277 Blast hits to 17619 proteins in 1295 species: Archae - 420; Bacteria - 10771; Metazoa - 1021; Fungi - 121; Plants - 280; Viruses - 0; Other Eukaryotes - 5664 (source: NCBI BLink). & (q6z351|aldol_orysa : 149.0) Putative aldehyde oxidase-like protein - Oryza sativa (Rice) & (reliability: 296.0) & (original description: no original description)","protein_coding" "PSME_00046901-RA","No alias","Pseudotsuga menziesii","(at4g11270 : 437.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 874.0) & (original description: no original description)","protein_coding" "PSME_00049918-RA","No alias","Pseudotsuga menziesii","(at4g18750 : 525.0) Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons.; DEFECTIVELY ORGANIZED TRIBUTARIES 4 (DOT4); INVOLVED IN: cotyledon vascular tissue pattern formation, phloem or xylem histogenesis, leaf vascular tissue pattern formation, leaf development; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G16860.1); Has 49728 Blast hits to 14531 proteins in 279 species: Archae - 0; Bacteria - 13; Metazoa - 210; Fungi - 140; Plants - 48642; Viruses - 0; Other Eukaryotes - 723 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 998.0) & (original description: no original description)","protein_coding" "PSME_00056132-RA","No alias","Pseudotsuga menziesii","(at2g13600 : 501.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 153.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1002.0) & (original description: no original description)","protein_coding" "PSME_00056296-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 664.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 160.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1328.0) & (original description: no original description)","protein_coding" "Seita.1G066600.1","No alias","Setaria italica ","rRNA adenosine dimethylase *(DIM1A)","protein_coding" "Seita.1G187700.1","No alias","Setaria italica ","substrate adaptor *(RBV) of CUL4-based E3 ubiquitin ligase complex","protein_coding" "Seita.1G190200.1","No alias","Setaria italica ","protein disulfide isomerase *(PDI-B)","protein_coding" "Seita.1G228900.1","No alias","Setaria italica ","RNA splicing factor *(RSZ21/22)","protein_coding" "Seita.1G333000.1","No alias","Setaria italica ","component *(p24-delta) of GPI-anchor protein cargo receptor complex","protein_coding" "Seita.1G334200.1","No alias","Setaria italica ","RNA editing factor *(CLB19)","protein_coding" "Seita.1G344200.1","No alias","Setaria italica ","component *(eL33) of large ribosomal-subunit (LSU) proteome","protein_coding" "Seita.2G048400.1","No alias","Setaria italica ","component *(uS13) of small ribosomal-subunit (SSU) proteome","protein_coding" "Seita.2G084800.1","No alias","Setaria italica ","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding" "Seita.2G122900.1","No alias","Setaria italica ","component *(eL42) of large ribosomal-subunit (LSU) proteome","protein_coding" "Seita.2G146200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G267800.1","No alias","Setaria italica ","protein S-acyltransferase *(PAT1-9)","protein_coding" "Seita.2G290900.1","No alias","Setaria italica ","acyl carrier protein *(ptACP))","protein_coding" "Seita.2G310200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G411100.1","No alias","Setaria italica ","chaperone involved in ATP synthase assembly *(ATP12)","protein_coding" "Seita.3G064400.1","No alias","Setaria italica ","pectin acetylesterase *(PAE)","protein_coding" "Seita.3G108100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G233700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G286500.1","No alias","Setaria italica ","manganese superoxide dismutase *(MSD)","protein_coding" "Seita.3G355900.1","No alias","Setaria italica ","membrane protein cargo receptor *(CNIH)","protein_coding" "Seita.3G370100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G374500.1","No alias","Setaria italica ","lipoyltransferase & EC_2.3 acyltransferase","protein_coding" "Seita.4G016800.1","No alias","Setaria italica ","SETD-type lysine N-methyltransferase","protein_coding" "Seita.4G083100.1","No alias","Setaria italica ","EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding" "Seita.5G043000.1","No alias","Setaria italica ","component *(eL30) of large ribosomal-subunit (LSU) proteome","protein_coding" "Seita.5G123500.1","No alias","Setaria italica ","glutaredoxin maturation factor (GRXS15) of iron-sulfur cluster assembly machinery","protein_coding" "Seita.5G144700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G157500.1","No alias","Setaria italica ","component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex","protein_coding" "Seita.5G229800.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(SEH1)","protein_coding" "Seita.5G307600.1","No alias","Setaria italica ","component *(TAH18) of cytosolic CIA system assembly phase","protein_coding" "Seita.5G323500.1","No alias","Setaria italica ","EC_3.6 hydrolase acting on acid anhydride","protein_coding" "Seita.5G338700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G055300.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.7G029400.1","No alias","Setaria italica ","A1-class (Pepsin) protease","protein_coding" "Seita.7G114200.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.7G148000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G188800.1","No alias","Setaria italica ","N-acetylglutamate kinase","protein_coding" "Seita.7G289900.1","No alias","Setaria italica ","co-chaperone (GFA2) involved in gametogenesis & co-chaperone *(Hsp40)","protein_coding" "Seita.7G290400.1","No alias","Setaria italica ","catalytic component *(SEC11) of SPC endoplasmic signal peptidase complex","protein_coding" "Seita.7G304700.1","No alias","Setaria italica ","EC_3.6 hydrolase acting on acid anhydride","protein_coding" "Seita.8G049100.1","No alias","Setaria italica ","long-chain acyl-CoA synthetase *(LACS9) & EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "Seita.8G054400.1","No alias","Setaria italica ","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding" "Seita.8G102100.1","No alias","Setaria italica ","substrate adaptor *(SKIP16) of SCF E3 ubiquitin ligase complex","protein_coding" "Seita.8G113000.1","No alias","Setaria italica ","ribosome biogenesis GTPase *(SIN2)","protein_coding" "Seita.8G145600.1","No alias","Setaria italica ","ribosome recycling factor *(RLI/ABCE)","protein_coding" "Seita.9G040900.1","No alias","Setaria italica ","peptidyl-prolyl cis-trans isomerase *(CYP22) & EC_5.2 cis-trans-isomerase","protein_coding" "Seita.9G147000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G172700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G212700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G228700.1","No alias","Setaria italica ","component *(uL14) of large ribosomal-subunit (LSU) proteome","protein_coding" "Seita.9G247500.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.9G248800.1","No alias","Setaria italica ","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding" "Seita.9G389100.1","No alias","Setaria italica ","amino acid transporter *(LAT)","protein_coding" "Seita.9G449900.1","No alias","Setaria italica ","N2-acetylornithine","protein_coding" "Seita.9G454800.1","No alias","Setaria italica ","component *(PYM) of RNA quality control Exon Junction complex","protein_coding" "Seita.9G537900.1","No alias","Setaria italica ","polyamine N-acetyltransferase *(NATA)","protein_coding" "Seita.9G559100.1","No alias","Setaria italica ","GDP1 LSU processome maturation factor","protein_coding" "Seita.J004100.1","No alias","Setaria italica ","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding" "Sobic.001G178500.1","No alias","Sorghum bicolor ","component *(uS19m) of small mitoribosomal-subunit proteome","protein_coding" "Sobic.001G261597.1","No alias","Sorghum bicolor ","A-class RAB GTPase","protein_coding" "Sobic.002G079700.1","No alias","Sorghum bicolor ","component *(bL22m) of large mitoribosomal-subunit proteome","protein_coding" "Sobic.002G294200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G395500.1","No alias","Sorghum bicolor ","chaperone involved in ATP synthase assembly *(ATP12)","protein_coding" "Sobic.003G063300.1","No alias","Sorghum bicolor ","component *(Pam18) of inner mitochondrion membrane TIM translocation system","protein_coding" "Sobic.003G077300.1","No alias","Sorghum bicolor ","component *(CGI121) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding" "Sobic.003G287300.1","No alias","Sorghum bicolor ","component *(bL20m) of large mitoribosomal-subunit proteome","protein_coding" "Sobic.004G248900.1","No alias","Sorghum bicolor ","component *(uL17m) of large mitoribosomal-subunit proteome","protein_coding" "Sobic.005G075500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G178100.1","No alias","Sorghum bicolor ","tRNA pseudouridine synthase *(PUS10)","protein_coding" "Sobic.008G115600.1","No alias","Sorghum bicolor ","component *(NRPA7) of RNA polymerase I complex","protein_coding" "Sobic.009G242300.3","No alias","Sorghum bicolor ","component *(RPP2) of large ribosomal-subunit (LSU) proteome","protein_coding" "Solyc01g010820","No alias","Solanum lycopersicum","Cullin family protein (AHRD V3.3 *** B9HJT6_POPTR)","protein_coding" "Solyc01g079840","No alias","Solanum lycopersicum","NEDD8-activating enzyme E1 catalytic subunit-like protein (AHRD V3.3 *** A0A0B0N4J5_GOSAR)","protein_coding" "Solyc01g081520","No alias","Solanum lycopersicum","30S ribosomal S2 (AHRD V3.3 *** A0A0B0MLM4_GOSAR)","protein_coding" "Solyc01g090280","No alias","Solanum lycopersicum","Leucine carboxyl methyltransferase, putative (AHRD V3.3 *** B9RCZ7_RICCO)","protein_coding" "Solyc01g102410","No alias","Solanum lycopersicum","Glutamyl-tRNA synthetase (AHRD V3.3 *** G7IAE3_MEDTR)","protein_coding" "Solyc01g103740","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc01g109350","No alias","Solanum lycopersicum","transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT3G18860.1)","protein_coding" "Solyc01g110450","No alias","Solanum lycopersicum","NADP dependent sorbitol 6-phosphate dehydrogenase family protein (AHRD V3.3 *** B9HRF0_POPTR)","protein_coding" "Solyc02g023970","No alias","Solanum lycopersicum","Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC)","protein_coding" "Solyc02g062270","No alias","Solanum lycopersicum","RNA binding protein, putative (AHRD V3.3 *** B9SZV1_RICCO)","protein_coding" "Solyc02g065300","No alias","Solanum lycopersicum","Leucyl-tRNA synthetase, putative (AHRD V3.3 *** B9SZE7_RICCO)","protein_coding" "Solyc02g069570","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9T6B9_RICCO)","protein_coding" "Solyc02g071600","No alias","Solanum lycopersicum","ATP synthase subunit b, chloroplastic (AHRD V3.3 --* ATPF_CHLSC)","protein_coding" "Solyc02g087360","No alias","Solanum lycopersicum","Paired amphipathic helix SIN3-like protein (AHRD V3.3 *** G7KJX2_MEDTR)","protein_coding" "Solyc02g093690","No alias","Solanum lycopersicum","ATP synthase mitochondrial F1 complex assembly factor 2 (AHRD V3.3 *** V5N8F3_PHAVU)","protein_coding" "Solyc03g007620","No alias","Solanum lycopersicum","Tic22-like family protein (AHRD V3.3 *** AT5G62650.1)","protein_coding" "Solyc03g112070","No alias","Solanum lycopersicum","P1B-type ATPase 4 (AHRD V3.3 --* Q2I7E8_ARAHA)","protein_coding" "Solyc03g117290","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc03g118690","No alias","Solanum lycopersicum","Translocon at the outer membrane of chloroplasts 64 (AHRD V3.3 *** TOC64_PEA)","protein_coding" "Solyc03g120350","No alias","Solanum lycopersicum","N-alpha-acetyltransferase 16, NatA auxiliary subunit (AHRD V3.3 *** A0A0B2P106_GLYSO)","protein_coding" "Solyc04g015290","No alias","Solanum lycopersicum","Myb family transcription factor APL (AHRD V3.3 *** M5WGF6_PRUPE)","protein_coding" "Solyc04g016370","No alias","Solanum lycopersicum","DNA helicase INO80-like protein (AHRD V3.3 *** AT3G57300.4)","protein_coding" "Solyc04g050510","No alias","Solanum lycopersicum","Translational activator GCN1, putative (AHRD V3.3 *** B9S7P8_RICCO)","protein_coding" "Solyc04g058090","No alias","Solanum lycopersicum","Phosphoribosylformylglycinamidine cyclo-ligase (AHRD V3.3 *** A0A061DT32_THECC)","protein_coding" "Solyc04g077790","No alias","Solanum lycopersicum","GPN-loop GTPase (AHRD V3.3 *** A0A0K9PFH6_ZOSMR)","protein_coding" "Solyc05g012080","No alias","Solanum lycopersicum","cytochrome b5 isoform B","protein_coding" "Solyc05g048750","No alias","Solanum lycopersicum","coiled-coil protein (AHRD V3.3 *-* AT2G45520.1)","protein_coding" "Solyc06g048850","No alias","Solanum lycopersicum","methionine-S-oxide reductase (AHRD V3.3 *-* AT2G17705.1)","protein_coding" "Solyc06g060080","No alias","Solanum lycopersicum","Mitochondrial ATP synthase 6 kDa subunit (AHRD V3.3 *** A0A0K9PE24_ZOSMR)","protein_coding" "Solyc06g062760","No alias","Solanum lycopersicum","50S ribosomal protein L34 (AHRD V3.3 *** W9QNR0_9ROSA)","protein_coding" "Solyc06g063290","No alias","Solanum lycopersicum","Pyridoxamine 5'-phosphate oxidase-related, FMN-binding (AHRD V3.3 *** A0A0K9NPW0_ZOSMR)","protein_coding" "Solyc06g069020","No alias","Solanum lycopersicum","Elongation factor 1 alpha (AHRD V3.3 *** A0A1B2LUN9_9CARY)","protein_coding" "Solyc06g072140","No alias","Solanum lycopersicum","phytochrome-associated serine/threonine-protein phosphatase 3-like","protein_coding" "Solyc07g008350","No alias","Solanum lycopersicum","voltage-dependent anion channel protein","protein_coding" "Solyc07g009320","No alias","Solanum lycopersicum","metaxin-related protein","protein_coding" "Solyc07g017400","No alias","Solanum lycopersicum","Regulatory particle non-ATPase 13 (AHRD V3.3 *** A0A097PT56_SOLLC)","protein_coding" "Solyc07g018350","No alias","Solanum lycopersicum","Mismatch repair protein (AHRD V3.3 *** D6QY21_SOLLC)","protein_coding" "Solyc07g039200","No alias","Solanum lycopersicum","WD-repeat protein, putative (AHRD V3.3 *** B9SP08_RICCO)","protein_coding" "Solyc07g047890","No alias","Solanum lycopersicum","Sterile alpha motif (SAM) domain-containing protein (AHRD V3.3 --*","protein_coding" "Solyc07g053470","No alias","Solanum lycopersicum","elongation factor family protein (AHRD V3.3 *** AT2G31060.2)","protein_coding" "Solyc07g064280","No alias","Solanum lycopersicum","Tryptophan synthase (AHRD V3.3 *** K4CHA9_SOLLC)","protein_coding" "Solyc07g065610","No alias","Solanum lycopersicum","Clade XIV lectin receptor kinase (AHRD V3.3 *** K4CHN9_SOLLC)","protein_coding" "Solyc08g075410","No alias","Solanum lycopersicum","Ribosomal protein L2 (AHRD V3.3 *** Q8VZZ7_SOLLC)","protein_coding" "Solyc08g080240","No alias","Solanum lycopersicum","NADH dehydrogenase 1 alpha subcomplex subunit 8 (AHRD V3.3 *** A0A0K9PKB1_ZOSMR)","protein_coding" "Solyc09g008470","No alias","Solanum lycopersicum","hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT2G32600.1)","protein_coding" "Solyc09g010330","No alias","Solanum lycopersicum","Nascent polypeptide-associated complex subunit beta (AHRD V3.3 *** K4CR60_SOLLC)","protein_coding" "Solyc09g075960","No alias","Solanum lycopersicum","Plant/T24G3-80 protein (AHRD V3.3 *** G7I6W7_MEDTR)","protein_coding" "Solyc10g009090","No alias","Solanum lycopersicum","Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT2G33820.1)","protein_coding" "Solyc10g078150","No alias","Solanum lycopersicum","Nascent polypeptide-associated complex subunit alpha-like protein (AHRD V3.3 *** W9S3Y1_9ROSA)","protein_coding" "Solyc10g080040","No alias","Solanum lycopersicum","Ribonuclease III family protein (AHRD V3.3 *-* AT4G37510.1)","protein_coding" "Solyc10g081030","No alias","Solanum lycopersicum","Nascent polypeptide-associated complex subunit alpha-like protein (AHRD V3.3 *** W9S3Y1_9ROSA)","protein_coding" "Solyc10g084280","No alias","Solanum lycopersicum","SUN-like protein 29","protein_coding" "Solyc10g084670","No alias","Solanum lycopersicum","Eukaryotic translation initiation factor 3 subunit A (AHRD V3.3 *** K4D3Q1_SOLLC)","protein_coding" "Solyc11g006660","No alias","Solanum lycopersicum","Eukaryotic peptide chain release factor subunit 1-1 (AHRD V3.3 *** ERF1X_ARATH)","protein_coding" "Solyc11g007760","No alias","Solanum lycopersicum","3-phosphoinositide-dependent protein kinase-1","protein_coding" "Solyc11g013440","No alias","Solanum lycopersicum","Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4D6E8_SOLLC)","protein_coding" "Solyc11g019920","No alias","Solanum lycopersicum","Protein disulfide isomerase, putative (AHRD V3.3 *** B9T6K9_RICCO)","protein_coding" "Solyc11g062220","No alias","Solanum lycopersicum","Zinc finger CCCH domain-containing protein 44 (AHRD V3.3 *-* W9QRR2_9ROSA)","protein_coding" "Solyc11g071670","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RN92_RICCO)","protein_coding" "Solyc12g005080","No alias","Solanum lycopersicum","alpha - ketoglutarate dehydrogenase subunit E2","protein_coding" "Solyc12g006550","No alias","Solanum lycopersicum","Ribosome biogenesis regulatory protein homolog (AHRD V3.3 *** RRS1_ARATH)","protein_coding" "Solyc12g008940","No alias","Solanum lycopersicum","Nucleosome assembly protein 1-1 (AHRD V3.3 *** NAP1A_TOBAC)","protein_coding" "Solyc12g019560","No alias","Solanum lycopersicum","Serine carboxypeptidase, putative (AHRD V3.3 *-* B9R6Y4_RICCO)","protein_coding" "Solyc12g027800","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc12g098150","No alias","Solanum lycopersicum","Aldo/keto reductase (AHRD V3.3 *** A0A103Y0I1_CYNCS)","protein_coding" "Solyc12g099470","No alias","Solanum lycopersicum","eukaryotic translation initiation factor 2 gamma subunit (AHRD V3.3 *** AT1G04170.2)","protein_coding" "Sopen02g038330","No alias","Solanum pennellii","ATP12 chaperone protein","protein_coding"