"sequence_id","alias","species","description","type"
"A4A49_15623","No alias","Nicotiana attenuata","dna replication licensing factor mcm2","protein_coding"
"A4A49_17565","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_18179","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_40217","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_55324","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"AC152495.1_FG012","No alias","Zea mays","endomembrane-type CA-ATPase 4","protein_coding"
"AC188023.3_FG005","No alias","Zea mays","Function unknown","protein_coding"
"AC203408.4_FG003","No alias","Zea mays","glycosyl hydrolase 9B10","protein_coding"
"AC206954.3_FG006","No alias","Zea mays","Function unknown","protein_coding"
"AC210013.4_FG016","No alias","Zea mays","Function unknown","protein_coding"
"AC211681.4_FG001","No alias","Zea mays","Tudor/PWWP/MBT superfamily protein","protein_coding"
"AC212001.2_FG009","No alias","Zea mays","Function unknown","protein_coding"
"AC214534.3_FG010","No alias","Zea mays","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"AC216893.3_FG006","No alias","Zea mays","Function unknown","protein_coding"
"AC225147.4_FG002","No alias","Zea mays","Ribosomal protein S12/S23 family protein","protein_coding"
"AC225193.3_FG003","No alias","Zea mays","AT hook motif DNA-binding family protein","protein_coding"
"AC233871.1_FG005","No alias","Zea mays","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"AC233885.1_FG001","No alias","Zea mays","Protein of unknown function, DUF593","protein_coding"
"At1g03310","No alias","Arabidopsis thaliana","ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]","protein_coding"
"At1g05910","No alias","Arabidopsis thaliana","ATPase family AAA domain-containing protein At1g05910 [Source:UniProtKB/Swiss-Prot;Acc:F4IAE9]","protein_coding"
"At1g10490","No alias","Arabidopsis thaliana","RNA cytidine acetyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIK4]","protein_coding"
"At1g12570","No alias","Arabidopsis thaliana","At1g12570 [Source:UniProtKB/TrEMBL;Acc:Q66GI5]","protein_coding"
"At1g16970","No alias","Arabidopsis thaliana","KU70 [Source:UniProtKB/TrEMBL;Acc:A0A178WAS1]","protein_coding"
"At1g23010","No alias","Arabidopsis thaliana","Multicopper oxidase LPR1 [Source:UniProtKB/Swiss-Prot;Acc:F4I4K5]","protein_coding"
"At1g23190","No alias","Arabidopsis thaliana","Probable phosphoglucomutase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:O49299]","protein_coding"
"At1g26190","No alias","Arabidopsis thaliana","Inorganic pyrophosphatase TTM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C664]","protein_coding"
"At1g26460","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD1]","protein_coding"
"At1g43170","No alias","Arabidopsis thaliana","60S ribosomal protein L3-1 [Source:UniProtKB/Swiss-Prot;Acc:P17094]","protein_coding"
"At1g44895","No alias","Arabidopsis thaliana","Minichromosone maintenance protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8APK6]","protein_coding"
"At1g44900","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPD9]","protein_coding"
"At1g48350","No alias","Arabidopsis thaliana","EMB3105 [Source:UniProtKB/TrEMBL;Acc:A0A178WDT1]","protein_coding"
"At1g49300","No alias","Arabidopsis thaliana","Ras-related protein RABG3e [Source:UniProtKB/Swiss-Prot;Acc:Q9XI98]","protein_coding"
"At1g52870","No alias","Arabidopsis thaliana","At1g52870/F14G24_14 [Source:UniProtKB/TrEMBL;Acc:Q9C933]","protein_coding"
"At1g54440","No alias","Arabidopsis thaliana","Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HWX0]","protein_coding"
"At1g57820","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase ORTHRUS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ0]","protein_coding"
"At1g60000","No alias","Arabidopsis thaliana","AT1G60000 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUJ3]","protein_coding"
"At1g64880","No alias","Arabidopsis thaliana","At1g64880 [Source:UniProtKB/TrEMBL;Acc:Q6GKU7]","protein_coding"
"At1g69070","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPr /.../07276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). [Source:TAIR;Acc:AT1G69070]","protein_coding"
"At1g69760","No alias","Arabidopsis thaliana","At1g69760 [Source:UniProtKB/TrEMBL;Acc:Q9C9L7]","protein_coding"
"At1g73620","No alias","Arabidopsis thaliana","Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9U9]","protein_coding"
"At1g73880","No alias","Arabidopsis thaliana","UDP-glycosyltransferase 89B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9B0]","protein_coding"
"At1g75080","No alias","Arabidopsis thaliana","Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]","protein_coding"
"At1g75440","No alias","Arabidopsis thaliana","Probable ubiquitin-conjugating enzyme E2 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWT2]","protein_coding"
"At1g77470","No alias","Arabidopsis thaliana","Replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAQ8]","protein_coding"
"At1g77550","No alias","Arabidopsis thaliana","At1g77550 [Source:UniProtKB/TrEMBL;Acc:Q6IDC7]","protein_coding"
"At1g80270","No alias","Arabidopsis thaliana","PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]","protein_coding"
"At2g01250","No alias","Arabidopsis thaliana","60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]","protein_coding"
"At2g07690","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM5 [Source:UniProtKB/Swiss-Prot;Acc:O80786]","protein_coding"
"At2g15320","No alias","Arabidopsis thaliana","Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9SHU4]","protein_coding"
"At2g16430","No alias","Arabidopsis thaliana","Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ7]","protein_coding"
"At2g16440","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVF5]","protein_coding"
"At2g18220","No alias","Arabidopsis thaliana","Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPV5]","protein_coding"
"At2g19385","No alias","Arabidopsis thaliana","At2g19385 [Source:UniProtKB/TrEMBL;Acc:Q8S8S8]","protein_coding"
"At2g21380","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-7M, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU0]","protein_coding"
"At2g21790","No alias","Arabidopsis thaliana","Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ20]","protein_coding"
"At2g27150","No alias","Arabidopsis thaliana","Abscisic-aldehyde oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q7G9P4]","protein_coding"
"At2g28470","No alias","Arabidopsis thaliana","Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]","protein_coding"
"At2g29960","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]","protein_coding"
"At2g30740","No alias","Arabidopsis thaliana","PTI1-like tyrosine-protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:O49339]","protein_coding"
"At2g31305","No alias","Arabidopsis thaliana","Protein phosphatase 1 regulatory subunit INH3 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8F7]","protein_coding"
"At2g34640","No alias","Arabidopsis thaliana","Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHY7]","protein_coding"
"At2g35190","No alias","Arabidopsis thaliana","Novel plant SNARE 11 [Source:UniProtKB/Swiss-Prot;Acc:Q944A9]","protein_coding"
"At2g40360","No alias","Arabidopsis thaliana","Ribosome biogenesis protein BOP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:F4IH25]","protein_coding"
"At2g40430","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Ot /.../karyotes - 254 (source: NCBI BLink). [Source:TAIR;Acc:AT2G40430]","protein_coding"
"At2g41540","No alias","Arabidopsis thaliana","Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:O22216]","protein_coding"
"At2g43920","No alias","Arabidopsis thaliana","HOL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VP97]","protein_coding"
"At3g01160","No alias","Arabidopsis thaliana","Pre-rRNA-processing ESF1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9MAC6]","protein_coding"
"At3g01640","No alias","Arabidopsis thaliana","Glucuronokinase G [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRK4]","protein_coding"
"At3g05470","No alias","Arabidopsis thaliana","Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]","protein_coding"
"At3g06530","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP28]","protein_coding"
"At3g06980","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUG7]","protein_coding"
"At3g07200","No alias","Arabidopsis thaliana","Putative RING zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9SFV0]","protein_coding"
"At3g11964","No alias","Arabidopsis thaliana","rRNA biogenesis protein RRP5 [Source:UniProtKB/Swiss-Prot;Acc:F4J8K6]","protein_coding"
"At3g12340","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]","protein_coding"
"At3g13940","No alias","Arabidopsis thaliana","DNA binding / DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL;Acc:Q9LVK6]","protein_coding"
"At3g15080","No alias","Arabidopsis thaliana","At3g15080 [Source:UniProtKB/TrEMBL;Acc:Q8LAA0]","protein_coding"
"At3g16150","No alias","Arabidopsis thaliana","ASPGB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VDS2]","protein_coding"
"At3g16720","No alias","Arabidopsis thaliana","RING-H2 finger protein ATL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9T5]","protein_coding"
"At3g16780","No alias","Arabidopsis thaliana","60S ribosomal protein L19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ6]","protein_coding"
"At3g16810","No alias","Arabidopsis thaliana","Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3]","protein_coding"
"At3g16840","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VJW0]","protein_coding"
"At3g20240","No alias","Arabidopsis thaliana","Probable mitochondrial adenine nucleotide transporter BTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX5]","protein_coding"
"At3g21540","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVF2]","protein_coding"
"At3g22890","No alias","Arabidopsis thaliana","ATP sulfurylase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK9]","protein_coding"
"At3g25230","No alias","Arabidopsis thaliana","Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]","protein_coding"
"At3g26220","No alias","Arabidopsis thaliana","Cytochrome P450 71B3 [Source:UniProtKB/Swiss-Prot;Acc:O65785]","protein_coding"
"At3g26460","No alias","Arabidopsis thaliana","Major latex protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LIM9]","protein_coding"
"At3g48500","No alias","Arabidopsis thaliana","Nucleic acid-binding, OB-fold-like protein [Source:TAIR;Acc:AT3G48500]","protein_coding"
"At3g55510","No alias","Arabidopsis thaliana","Noc2p family [Source:UniProtKB/TrEMBL;Acc:Q0WVH0]","protein_coding"
"At3g56170","No alias","Arabidopsis thaliana","CAN1 [Source:UniProtKB/TrEMBL;Acc:A0A178VL52]","protein_coding"
"At3g56410","No alias","Arabidopsis thaliana","Uncharacterized protein T5P19_60 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ9]","protein_coding"
"At3g57060","No alias","Arabidopsis thaliana","Condensin complex subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4J246]","protein_coding"
"At3g57660","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase I subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVY0]","protein_coding"
"At4g02060","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM7 [Source:UniProtKB/Swiss-Prot;Acc:P43299]","protein_coding"
"At4g02200","No alias","Arabidopsis thaliana","Drought-responsive family protein [Source:UniProtKB/TrEMBL;Acc:F4JH94]","protein_coding"
"At4g03100","No alias","Arabidopsis thaliana","Rho GTPase-activating protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JI46]","protein_coding"
"At4g05410","No alias","Arabidopsis thaliana","U3 snoRNP-associated protein-like YAO [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V4]","protein_coding"
"At4g09890","No alias","Arabidopsis thaliana","At4g09890 [Source:UniProtKB/TrEMBL;Acc:Q9T0E8]","protein_coding"
"At4g10480","No alias","Arabidopsis thaliana","Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]","protein_coding"
"At4g12790","No alias","Arabidopsis thaliana","AT4G12790 protein [Source:UniProtKB/TrEMBL;Acc:Q8W4C1]","protein_coding"
"At4g13750","No alias","Arabidopsis thaliana","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4JTS8]","protein_coding"
"At4g14770","No alias","Arabidopsis thaliana","Protein tesmin/TSO1-like CXC 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JIF5]","protein_coding"
"At4g14930","No alias","Arabidopsis thaliana","At4g14930 [Source:UniProtKB/TrEMBL;Acc:Q8LAM2]","protein_coding"
"At4g34910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW44]","protein_coding"
"At4g35750","No alias","Arabidopsis thaliana","At4g35750 [Source:UniProtKB/TrEMBL;Acc:O81806]","protein_coding"
"At4g39280","No alias","Arabidopsis thaliana","Phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9T034]","protein_coding"
"At4g39540","No alias","Arabidopsis thaliana","Shikimate kinase 2 [Source:UniProtKB/TrEMBL;Acc:F4JW33]","protein_coding"
"At5g03340","No alias","Arabidopsis thaliana","Cell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]","protein_coding"
"At5g04750","No alias","Arabidopsis thaliana","At5g04750 [Source:UniProtKB/TrEMBL;Acc:Q84W11]","protein_coding"
"At5g07320","No alias","Arabidopsis thaliana","Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q9LY28]","protein_coding"
"At5g08020","No alias","Arabidopsis thaliana","Replication protein A 70 kDa DNA-binding subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9SD82]","protein_coding"
"At5g08130","No alias","Arabidopsis thaliana","basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT5G08130]","protein_coding"
"At5g08570","No alias","Arabidopsis thaliana","Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UBM6]","protein_coding"
"At5g14050","No alias","Arabidopsis thaliana","U3 small nucleolar RNA-associated protein 18 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU5]","protein_coding"
"At5g15980","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]","protein_coding"
"At5g16750","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFE2]","protein_coding"
"At5g17790","No alias","Arabidopsis thaliana","Zinc finger protein VAR3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8S9K3]","protein_coding"
"At5g18440","No alias","Arabidopsis thaliana","NUFIP [Source:UniProtKB/TrEMBL;Acc:A0A178UB40]","protein_coding"
"At5g18750","No alias","Arabidopsis thaliana","DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]","protein_coding"
"At5g19760","No alias","Arabidopsis thaliana","Mitochondrial dicarboxylate/tricarboxylate transporter DTC [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M0]","protein_coding"
"At5g22500","No alias","Arabidopsis thaliana","Fatty acyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39152]","protein_coding"
"At5g23570","No alias","Arabidopsis thaliana","Protein SUPPRESSOR OF GENE SILENCING 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX1]","protein_coding"
"At5g27330","No alias","Arabidopsis thaliana","Prefoldin chaperone subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4K498]","protein_coding"
"At5g38720","No alias","Arabidopsis thaliana","unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). [Source:TAIR;Acc:AT5G38720]","protein_coding"
"At5g39960","No alias","Arabidopsis thaliana","GTP-binding protein [Source:UniProtKB/TrEMBL;Acc:F4KFX1]","protein_coding"
"At5g46240","No alias","Arabidopsis thaliana","At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]","protein_coding"
"At5g46280","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL33]","protein_coding"
"At5g46570","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]","protein_coding"
"At5g46740","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]","protein_coding"
"At5g50740","No alias","Arabidopsis thaliana","Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4U8]","protein_coding"
"At5g50840","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G50840]","protein_coding"
"At5g56500","No alias","Arabidopsis thaliana","Chaperonin 60 subunit beta 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:C0Z361]","protein_coding"
"At5g56710","No alias","Arabidopsis thaliana","60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]","protein_coding"
"At5g59770","No alias","Arabidopsis thaliana","Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [Source:UniProtKB/TrEMBL;Acc:Q8GW27]","protein_coding"
"At5g60040","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL;Acc:F4JXF8]","protein_coding"
"At5g61000","No alias","Arabidopsis thaliana","Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UJ91]","protein_coding"
"At5g61780","No alias","Arabidopsis thaliana","Ribonuclease TUDOR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT0]","protein_coding"
"At5g63640","No alias","Arabidopsis thaliana","TOM1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ0]","protein_coding"
"At5g67100","No alias","Arabidopsis thaliana","DNA polymerase alpha catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9FHA3]","protein_coding"
"Bradi1g01330","No alias","Brachypodium distachyon","Protein of unknown function (DUF565)","protein_coding"
"Bradi1g01715","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g07635","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g10621","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g14710","No alias","Brachypodium distachyon","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Bradi1g14750","No alias","Brachypodium distachyon","salt tolerance zinc finger","protein_coding"
"Bradi1g14810","No alias","Brachypodium distachyon","zinc finger protein 7","protein_coding"
"Bradi1g19080","No alias","Brachypodium distachyon","glutamate synthase 1","protein_coding"
"Bradi1g19730","No alias","Brachypodium distachyon","carboxyesterase 18","protein_coding"
"Bradi1g21903","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g22551","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g26170","No alias","Brachypodium distachyon","binding;calmodulin binding","protein_coding"
"Bradi1g28130","No alias","Brachypodium distachyon","expansin-like A1","protein_coding"
"Bradi1g28729","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g29995","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g31630","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g47200","No alias","Brachypodium distachyon","regulatory particle triple-A 1A","protein_coding"
"Bradi1g48661","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g54210","No alias","Brachypodium distachyon","seed imbibition 2","protein_coding"
"Bradi1g58430","No alias","Brachypodium distachyon","inositol transporter 2","protein_coding"
"Bradi1g58580","No alias","Brachypodium distachyon","nine-cis-epoxycarotenoid dioxygenase 9","protein_coding"
"Bradi1g60217","No alias","Brachypodium distachyon","Protein of unknown function (DUF300)","protein_coding"
"Bradi1g62175","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g64800","No alias","Brachypodium distachyon","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Bradi1g76000","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g03108","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g04117","No alias","Brachypodium distachyon","E2F target gene 1","protein_coding"
"Bradi2g09876","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g16175","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g18270","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi2g19211","No alias","Brachypodium distachyon","ATP-dependent helicase family protein","protein_coding"
"Bradi2g19480","No alias","Brachypodium distachyon","GATA transcription factor 12","protein_coding"
"Bradi2g21080","No alias","Brachypodium distachyon","structural maintenance of chromosome 3","protein_coding"
"Bradi2g22360","No alias","Brachypodium distachyon","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Bradi2g22670","No alias","Brachypodium distachyon","ammonium transporter 2","protein_coding"
"Bradi2g22902","No alias","Brachypodium distachyon","inhibitor-3","protein_coding"
"Bradi2g23445","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g24103","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g26756","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g39622","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi2g39648","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi2g40600","No alias","Brachypodium distachyon","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Bradi2g44160","No alias","Brachypodium distachyon","cytochrome P450, family 72, subfamily A, polypeptide 15","protein_coding"
"Bradi2g46030","No alias","Brachypodium distachyon","Ribosomal protein L18ae family","protein_coding"
"Bradi2g50650","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g54814","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g57730","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi2g61350","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Bradi2g62140","No alias","Brachypodium distachyon","FIZZY-related 3","protein_coding"
"Bradi3g00681","No alias","Brachypodium distachyon","Ubiquitin-like superfamily protein","protein_coding"
"Bradi3g04671","No alias","Brachypodium distachyon","Subtilisin-like serine endopeptidase family protein","protein_coding"
"Bradi3g06670","No alias","Brachypodium distachyon","abscisic acid responsive elements-binding factor 2","protein_coding"
"Bradi3g08070","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi3g08390","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding"
"Bradi3g13435","No alias","Brachypodium distachyon","SET domain protein 25","protein_coding"
"Bradi3g15027","No alias","Brachypodium distachyon","starch synthase 3","protein_coding"
"Bradi3g15310","No alias","Brachypodium distachyon","glucose-6-phosphate/phosphate translocator 2","protein_coding"
"Bradi3g17519","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g18220","No alias","Brachypodium distachyon","O-Glycosyl hydrolases family 17 protein","protein_coding"
"Bradi3g20070","No alias","Brachypodium distachyon","Voltage-gated chloride channel family protein","protein_coding"
"Bradi3g29430","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g34191","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding"
"Bradi3g34355","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g39467","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Bradi3g41470","No alias","Brachypodium distachyon","NAC domain containing protein 47","protein_coding"
"Bradi3g41520","No alias","Brachypodium distachyon","ARF GTPase-activating protein","protein_coding"
"Bradi3g41630","No alias","Brachypodium distachyon","retinoblastoma-related 1","protein_coding"
"Bradi3g42869","No alias","Brachypodium distachyon","F1F0-ATPase inhibitor protein, putative","protein_coding"
"Bradi3g44596","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g46473","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g47417","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi3g50770","No alias","Brachypodium distachyon","Sec20 family protein","protein_coding"
"Bradi3g54190","No alias","Brachypodium distachyon","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Bradi3g59795","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g60870","No alias","Brachypodium distachyon","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding"
"Bradi3g61016","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g00883","No alias","Brachypodium distachyon","S-domain-2 5","protein_coding"
"Bradi4g03610","No alias","Brachypodium distachyon","Amino acid permease family protein","protein_coding"
"Bradi4g04730","No alias","Brachypodium distachyon","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Bradi4g05040","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g13352","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g13356","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g16428","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19207","No alias","Brachypodium distachyon","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Bradi4g24807","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g26369","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g27440","No alias","Brachypodium distachyon","BRI1 like","protein_coding"
"Bradi4g30530","No alias","Brachypodium distachyon","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding"
"Bradi4g34131","No alias","Brachypodium distachyon","senescence-associated gene 12","protein_coding"
"Bradi4g37327","No alias","Brachypodium distachyon","NAC domain containing protein 57","protein_coding"
"Bradi4g40785","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g00720","No alias","Brachypodium distachyon","inhibitor-3","protein_coding"
"Bradi5g13467","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi5g14800","No alias","Brachypodium distachyon","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Bradi5g19741","No alias","Brachypodium distachyon","DNA replication helicase, putative","protein_coding"
"Brara.A00058.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00243.1","No alias","Brassica rapa","SAGA complex assembly platform component *(TRA1) & component *(TRA1) of SAGA transcription co-activator complex","protein_coding"
"Brara.A00374.1","No alias","Brassica rapa","subunit gamma of cargo adaptor F-subcomplex","protein_coding"
"Brara.A00392.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00518.1","No alias","Brassica rapa","nascent RNA chaperone *(LA)","protein_coding"
"Brara.A00930.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00988.1","No alias","Brassica rapa","A-class RAB GTPase","protein_coding"
"Brara.A00999.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01261.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01274.1","No alias","Brassica rapa","component *(KAE1) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"Brara.A01326.1","No alias","Brassica rapa","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A01457.1","No alias","Brassica rapa","NADPH","protein_coding"
"Brara.A01472.1","No alias","Brassica rapa","autophagosome cargo receptor protein *(NBR1)","protein_coding"
"Brara.A01917.1","No alias","Brassica rapa","RopGEF guanine nucleotide exchange factor *(SPIKE)","protein_coding"
"Brara.A01960.1","No alias","Brassica rapa","M28-class carboxypeptidase","protein_coding"
"Brara.A01990.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02618.1","No alias","Brassica rapa","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Brara.A02836.1","No alias","Brassica rapa","subunit alpha of CCT chaperonin folding complex *(CCT1)","protein_coding"
"Brara.A03434.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03599.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03698.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RFI2)","protein_coding"
"Brara.A03875.1","No alias","Brassica rapa","component *(mS80) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.B00173.1","No alias","Brassica rapa","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Brara.B00444.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01058.1","No alias","Brassica rapa","actin-depolymerizing factor","protein_coding"
"Brara.B01714.1","No alias","Brassica rapa","primase component *(POLA3) of DNA polymerase alpha complex","protein_coding"
"Brara.B01734.1","No alias","Brassica rapa","replication fork tethering component *(POLA2) of DNA polymerase alpha complex","protein_coding"
"Brara.B02338.1","No alias","Brassica rapa","BZR-type transcription factor & transcription factor *(BES/BZR)","protein_coding"
"Brara.B02340.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02366.1","No alias","Brassica rapa","proton","protein_coding"
"Brara.B02476.1","No alias","Brassica rapa","alpha-type-6 component *(PAF) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.B02513.1","No alias","Brassica rapa","component *(GCP5) of gamma-Tubulin ring complex","protein_coding"
"Brara.B02614.1","No alias","Brassica rapa","component *(Toc90/120/132/159) of outer envelope TOC translocation system","protein_coding"
"Brara.B02725.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02957.1","No alias","Brassica rapa","subunit delta_ of ATP synthase peripheral MF1 subcomplex","protein_coding"
"Brara.B03432.1","No alias","Brassica rapa","LRR-Xa protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03480.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03550.1","No alias","Brassica rapa","histone *(H2A)","protein_coding"
"Brara.B03590.1","No alias","Brassica rapa","mRNA-translocation factor *(eEF2))","protein_coding"
"Brara.B03596.1","No alias","Brassica rapa","uridylate kinase *(UMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03607.1","No alias","Brassica rapa","glutamate-tRNA ligase","protein_coding"
"Brara.B03616.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03718.1","No alias","Brassica rapa","DNA bending architectural protein *(HMG-B)","protein_coding"
"Brara.B03799.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03983.1","No alias","Brassica rapa","Kinesin-14-type motor protein","protein_coding"
"Brara.C00133.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00175.1","No alias","Brassica rapa","regulatory protein *(IF1) of ATP synthase activity","protein_coding"
"Brara.C00334.1","No alias","Brassica rapa","core component *(NHP2) of H/ACA snoRNP RNA pseudouridylation complex","protein_coding"
"Brara.C00601.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.C00661.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00716.1","No alias","Brassica rapa","component *(COG1) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Brara.C00747.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00856.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00912.1","No alias","Brassica rapa","EC_1.6 oxidoreductase acting on NADH or NADPH","protein_coding"
"Brara.C01220.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.C01467.1","No alias","Brassica rapa","AHL clade-B transcription factor","protein_coding"
"Brara.C02125.1","No alias","Brassica rapa","NAD-dependent glycerol-3-phosphate dehydrogenase & NAD-dependent glycerol-3-phosphate dehydrogenase","protein_coding"
"Brara.C02292.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02829.1","No alias","Brassica rapa","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Brara.C02900.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.C02927.1","No alias","Brassica rapa","component *(uL13m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.C03198.1","No alias","Brassica rapa","rRNA processing factor *(IRP1)","protein_coding"
"Brara.C03202.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.C03424.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03588.1","No alias","Brassica rapa","acyl-CoA desaturase *(ADS) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.C03620.1","No alias","Brassica rapa","subgroup ARR-B transcription factor & B-type ARR response activator of cytokinin signalling","protein_coding"
"Brara.C03970.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04036.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex *(NUP133)","protein_coding"
"Brara.C04051.1","No alias","Brassica rapa","component *(MCM5) of MCM replicative DNA helicase complex","protein_coding"
"Brara.C04053.1","No alias","Brassica rapa","triterpenoid synthase & EC_5.4 intramolecular transferase & cycloartenol synthase","protein_coding"
"Brara.C04091.1","No alias","Brassica rapa","component *(MCM9) of MCM8-9 cell cycle auxiliary complex","protein_coding"
"Brara.C04144.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding"
"Brara.C04147.1","No alias","Brassica rapa","component *(MCM4) of MCM replicative DNA helicase complex","protein_coding"
"Brara.C04154.1","No alias","Brassica rapa","scaffold protein ISCA1 of mitochondrial ISC system transfer phase","protein_coding"
"Brara.C04209.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C04564.1","No alias","Brassica rapa","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Brara.C04663.1","No alias","Brassica rapa","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D00015.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & homocysteine S-methyltransferase","protein_coding"
"Brara.D00144.1","No alias","Brassica rapa","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding"
"Brara.D00218.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond & pectin methylesterase","protein_coding"
"Brara.D00413.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00516.1","No alias","Brassica rapa","histone *(H2B)","protein_coding"
"Brara.D00562.1","No alias","Brassica rapa","fructose-bisphosphate aldolase *(FBA) & cytosolic fructose-bisphosphate aldolase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.D00843.1","No alias","Brassica rapa","component *(CAP-G) of condensin I complex","protein_coding"
"Brara.D00846.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00994.1","No alias","Brassica rapa","component *(uS4) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.D01212.1","No alias","Brassica rapa","primase component *(POLA4) of DNA polymerase alpha complex","protein_coding"
"Brara.D01243.1","No alias","Brassica rapa","cold-responsive mRNA chaperone *(CSD) & RNA chaperone (CSP) of mRNA quality control","protein_coding"
"Brara.D01584.1","No alias","Brassica rapa","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Brara.D01721.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.D01749.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01891.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02376.1","No alias","Brassica rapa","cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)","protein_coding"
"Brara.D02441.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02605.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond & pectin methylesterase","protein_coding"
"Brara.D02732.1","No alias","Brassica rapa","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & 5-enolpyruvyl-shikimate 3-phosphate (EPSP) synthase","protein_coding"
"Brara.D02735.1","No alias","Brassica rapa","LRR-IV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E00273.1","No alias","Brassica rapa","regulatory protein *(OSD1/UVI4) of ubiquitination","protein_coding"
"Brara.E00328.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00661.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00935.1","No alias","Brassica rapa","component *(PIG-C) of GPI N-acetylglucosamine transferase complex","protein_coding"
"Brara.E01218.1","No alias","Brassica rapa","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Brara.E01233.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01246.1","No alias","Brassica rapa","helicase auxiliary factor *(CDT1)","protein_coding"
"Brara.E01344.1","No alias","Brassica rapa","sliding clamp protein *(PCNA)","protein_coding"
"Brara.E01685.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.E01818.1","No alias","Brassica rapa","protein disulfide isomerase *(PDI-B)","protein_coding"
"Brara.E01931.1","No alias","Brassica rapa","transcription factor *(ANAC13/17) & NAC-type transcription factor","protein_coding"
"Brara.E01946.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02070.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02197.1","No alias","Brassica rapa","subunit alpha of CCT chaperonin folding complex *(CCT1)","protein_coding"
"Brara.E02226.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02389.1","No alias","Brassica rapa","subunit delta *(CCT4) of CCT chaperonin folding complex","protein_coding"
"Brara.E02452.1","No alias","Brassica rapa","nucleocytoplasmic transport karyopherin *(PLANTKAP)","protein_coding"
"Brara.E02459.1","No alias","Brassica rapa","phosphatase-type DBP-type transcription factor & clade G phosphatase *(DBP)","protein_coding"
"Brara.E02460.1","No alias","Brassica rapa","dihydrolipoamide dehydrogenase component of 2-oxoglutarate dehydrogenase complex & dihydrolipoamide dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex & dihydrolipoyl dehydrogenase component *(L-protein) of glycine cleavage system & dihydrolipoamide dehydrogenase component of mitochondrial pyruvate dehydrogenase complex & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Brara.E02533.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02594.1","No alias","Brassica rapa","assembly factor involved in ITS1 rRNA removal *(BRIX1)","protein_coding"
"Brara.E02819.1","No alias","Brassica rapa","CMF transcription factor","protein_coding"
"Brara.E02852.1","No alias","Brassica rapa","subunit alpha of NAC ribosome-associated chaperone complex","protein_coding"
"Brara.E03260.1","No alias","Brassica rapa","component *(eL29) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E03571.1","No alias","Brassica rapa","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E03587.1","No alias","Brassica rapa","rhamnosyltransferase *(RRT)","protein_coding"
"Brara.F00072.1","No alias","Brassica rapa","stress granule assembly factor *(UBP1)","protein_coding"
"Brara.F00331.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.F00469.1","No alias","Brassica rapa","Globulin-type seed storage protein","protein_coding"
"Brara.F00511.1","No alias","Brassica rapa","catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex","protein_coding"
"Brara.F00569.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.F00654.1","No alias","Brassica rapa","DOG-type transcription factor","protein_coding"
"Brara.F00763.1","No alias","Brassica rapa","DNA chromomethylase *(CMT)","protein_coding"
"Brara.F00938.1","No alias","Brassica rapa","phosphate transporter *(PHO1) & phosphate transporter *(PHO)","protein_coding"
"Brara.F01003.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01064.1","No alias","Brassica rapa","RNA editing factor *(POCO)","protein_coding"
"Brara.F01090.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01320.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01368.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01497.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & pyrophosphate-dependent phosphofructokinase","protein_coding"
"Brara.F01757.1","No alias","Brassica rapa","component *(CAP-E2/SMC2) of condensin I/II complex","protein_coding"
"Brara.F01784.1","No alias","Brassica rapa","deoxyuridine triphosphatase *(DUT) & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.F01786.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.F01818.1","No alias","Brassica rapa","component *(RRP46) of exosome EXO9 core complex","protein_coding"
"Brara.F01828.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.F01904.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01932.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02241.1","No alias","Brassica rapa","chromatin architectural modulator *(DEK)","protein_coding"
"Brara.F02479.1","No alias","Brassica rapa","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Brara.F02517.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02951.1","No alias","Brassica rapa","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Brara.F03113.1","No alias","Brassica rapa","component *(CAP-C/SMC4) of condensin I/II complex","protein_coding"
"Brara.F03224.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03273.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03548.1","No alias","Brassica rapa","associated plant-specific component *(PAWH) of E3 ubiquitin ligase complex","protein_coding"
"Brara.F03629.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03728.1","No alias","Brassica rapa","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"Brara.G00097.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00292.1","No alias","Brassica rapa","regulatory component of isocitrate dehydrogenase heterodimer & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G00336.1","No alias","Brassica rapa","subunit gamma of cargo adaptor F-subcomplex","protein_coding"
"Brara.G00348.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00542.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00642.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00706.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00770.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00919.1","No alias","Brassica rapa","poly-P/G elongation factor *(eEF5/eIF5A))","protein_coding"
"Brara.G01189.1","No alias","Brassica rapa","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G01198.1","No alias","Brassica rapa","catalytic component *(POLA1) of DNA polymerase alpha complex","protein_coding"
"Brara.G01215.1","No alias","Brassica rapa","component *(bL25m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.G01363.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01459.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01522.1","No alias","Brassica rapa","regulatory component *(Tom7) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Brara.G01998.1","No alias","Brassica rapa","scaffold component *(Sec31) of coat protein complex","protein_coding"
"Brara.G02127.1","No alias","Brassica rapa","activating factor *(eIF5) of eIF2-GTP hydrolysis","protein_coding"
"Brara.G02599.1","No alias","Brassica rapa","component *(CAF1a/FAS1) of CAF1 histone chaperone complex","protein_coding"
"Brara.G02696.1","No alias","Brassica rapa","component *(DDR) of ISWI chromatin remodeling complex","protein_coding"
"Brara.G02969.1","No alias","Brassica rapa","ARF-GTPase *(ARF1)","protein_coding"
"Brara.G03032.1","No alias","Brassica rapa","UDP-glucose glycoprotein glucosyltransferase *(UGGT)","protein_coding"
"Brara.G03137.1","No alias","Brassica rapa","tRNA export karyopherin *(XPOT) & nucleocytoplasmic export karyopherin *(XPO3/XPOT)","protein_coding"
"Brara.G03203.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding"
"Brara.G03238.1","No alias","Brassica rapa","regulatory protein *(CBP60) of systemic acquired resistance","protein_coding"
"Brara.G03422.1","No alias","Brassica rapa","substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin ligase complex","protein_coding"
"Brara.G03433.1","No alias","Brassica rapa","SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex","protein_coding"
"Brara.G03551.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00355.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00452.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00550.1","No alias","Brassica rapa","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Brara.H00773.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01207.1","No alias","Brassica rapa","non-canonical component *(XLG) of heterotrimeric G-protein complex","protein_coding"
"Brara.H01488.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01550.1","No alias","Brassica rapa","SAM-dependent carboxyl methyltransferase *(GAMT) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Brara.H01794.1","No alias","Brassica rapa","subunit alpha of coat protein complex","protein_coding"
"Brara.H01841.1","No alias","Brassica rapa","methylthioadenosine nucleosidase *(MTN)","protein_coding"
"Brara.H01948.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02404.1","No alias","Brassica rapa","histone chaperone *(NRP)","protein_coding"
"Brara.H02738.1","No alias","Brassica rapa","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Brara.H02832.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02935.1","No alias","Brassica rapa","Ran-activation accessory protein *(RanBP1)","protein_coding"
"Brara.H03115.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding"
"Brara.I00125.1","No alias","Brassica rapa","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Brara.I00165.1","No alias","Brassica rapa","class phi glutathione S-transferase","protein_coding"
"Brara.I00180.1","No alias","Brassica rapa","regulatory protein *(MAS2) of rDNA transcription","protein_coding"
"Brara.I00401.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00481.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00505.1","No alias","Brassica rapa","uridylate kinase *(UMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00644.1","No alias","Brassica rapa","component *(RPA1) of single-stranded-DNA binding RPA complex & component *(RPA1) of RPA presynaptic filament assembly factor complex","protein_coding"
"Brara.I00886.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01023.1","No alias","Brassica rapa","ARID-type transcription factor","protein_coding"
"Brara.I01073.1","No alias","Brassica rapa","phosphopantetheine adenylyl transferase","protein_coding"
"Brara.I01114.1","No alias","Brassica rapa","protease *(SBT2)","protein_coding"
"Brara.I01274.1","No alias","Brassica rapa","ER-tubule curvature-inducing protein *(Reticulon)","protein_coding"
"Brara.I01380.1","No alias","Brassica rapa","SSU processome assembly factor *(IMP4)","protein_coding"
"Brara.I01582.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01641.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding"
"Brara.I01908.1","No alias","Brassica rapa","component *(uL5) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I02024.1","No alias","Brassica rapa","ubiquitin adaptor protein *(TOL)","protein_coding"
"Brara.I02160.1","No alias","Brassica rapa","scaffold component A of PP2A phosphatase complexes & scaffold component *(PP2A-phosphatase) of TTP preprophase band formation complex","protein_coding"
"Brara.I02180.1","No alias","Brassica rapa","NAD(P)H dehydrogenase *(NDB)","protein_coding"
"Brara.I02199.1","No alias","Brassica rapa","component *(DFM1) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Brara.I02248.1","No alias","Brassica rapa","component *(ORC1) of origin recognition complex","protein_coding"
"Brara.I02406.1","No alias","Brassica rapa","plastidial ascorbate peroxidase *(APX) & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"Brara.I02417.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02430.1","No alias","Brassica rapa","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I02515.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02669.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03043.1","No alias","Brassica rapa","subunit epsilon *(CCT5) of CCT chaperonin folding complex","protein_coding"
"Brara.I03320.1","No alias","Brassica rapa","14-3-3 phosphoprotein-binding protein *(GRF)","protein_coding"
"Brara.I03503.1","No alias","Brassica rapa","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I03543.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03565.1","No alias","Brassica rapa","component *(uS11) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I03590.1","No alias","Brassica rapa","component *(GRF) of GRF-GIF transcriptional complex","protein_coding"
"Brara.I03592.1","No alias","Brassica rapa","fructose-bisphosphate aldolase *(FBA) & cytosolic fructose-bisphosphate aldolase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.I03663.1","No alias","Brassica rapa","protease *(RBL)","protein_coding"
"Brara.I03781.1","No alias","Brassica rapa","component *(uL23) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I03890.1","No alias","Brassica rapa","RING-H2-class BTL-subclass E3 ubiquitin ligase","protein_coding"
"Brara.I04310.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04513.1","No alias","Brassica rapa","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"Brara.I04553.1","No alias","Brassica rapa","DNA methyltransferase *(MET)","protein_coding"
"Brara.I04560.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.I04993.1","No alias","Brassica rapa","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I05035.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05075.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05365.1","No alias","Brassica rapa","sliding clamp protein *(PCNA)","protein_coding"
"Brara.I05428.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05431.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00285.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00584.1","No alias","Brassica rapa","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"Brara.J00936.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.J01120.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01180.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01289.1","No alias","Brassica rapa","large subunit of TFIIa basal transcription factor complex","protein_coding"
"Brara.J01402.1","No alias","Brassica rapa","ARF-type transcription factor","protein_coding"
"Brara.J01571.1","No alias","Brassica rapa","glutaredoxin","protein_coding"
"Brara.J01652.1","No alias","Brassica rapa","Ran-activating protein of nucleocytoplasmic transport","protein_coding"
"Brara.J02004.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02124.1","No alias","Brassica rapa","5-formyl-THF cycloligase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Brara.J02319.1","No alias","Brassica rapa","A-class RAB GTPase","protein_coding"
"Brara.J02341.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02504.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02887.1","No alias","Brassica rapa","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Brara.K00134.1","No alias","Brassica rapa","calcium sensor *(CBL)","protein_coding"
"Brara.K00581.1","No alias","Brassica rapa","proton","protein_coding"
"Brara.K00712.1","No alias","Brassica rapa","subunit G of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Brara.K00720.1","No alias","Brassica rapa","mannan O-acetyltransferase *(MOAT)","protein_coding"
"Brara.K00849.1","No alias","Brassica rapa","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Brara.K01062.1","No alias","Brassica rapa","nicotinamide/nicotinate mononucleotide adenylyltransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.K01651.1","No alias","Brassica rapa","subunit beta of cargo adaptor F-subcomplex","protein_coding"
"Brara.K01700.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase) & A1-class (Pepsin) protease","protein_coding"
"Brara.K01823.1","No alias","Brassica rapa","component *(HAP6) of oligosaccharyl transferase (OST) complex","protein_coding"
"Cre01.g002900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g003463","No alias","Chlamydomonas reinhardtii","MUTS homolog 2","protein_coding"
"Cre01.g004651","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g007400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g011000","No alias","Chlamydomonas reinhardtii","Ribosomal protein L6 family protein","protein_coding"
"Cre01.g012100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g012300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g015250","No alias","Chlamydomonas reinhardtii","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding"
"Cre01.g017100","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding"
"Cre01.g019150","No alias","Chlamydomonas reinhardtii","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding"
"Cre01.g022550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g027000","No alias","Chlamydomonas reinhardtii","ribosomal protein large subunit 16A","protein_coding"
"Cre01.g029100","No alias","Chlamydomonas reinhardtii","PSF2","protein_coding"
"Cre01.g034750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g055436","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g077024","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g078600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g088151","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g091100","No alias","Chlamydomonas reinhardtii","Ribosomal protein L23/L15e family protein","protein_coding"
"Cre02.g095050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095080","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095110","No alias","Chlamydomonas reinhardtii","inhibitor-3","protein_coding"
"Cre02.g095135","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095294","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre02.g100000","No alias","Chlamydomonas reinhardtii","Replication protein A, subunit RPA32","protein_coding"
"Cre02.g103350","No alias","Chlamydomonas reinhardtii","fatty acid amide hydrolase","protein_coding"
"Cre02.g104950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g106600","No alias","Chlamydomonas reinhardtii","Ribosomal protein S19e family protein","protein_coding"
"Cre02.g108000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre02.g108150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g118600","No alias","Chlamydomonas reinhardtii","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"Cre02.g118900","No alias","Chlamydomonas reinhardtii","Metal-dependent protein hydrolase","protein_coding"
"Cre02.g142186","No alias","Chlamydomonas reinhardtii","Tubulin/FtsZ family protein","protein_coding"
"Cre02.g143050","No alias","Chlamydomonas reinhardtii","60S acidic ribosomal protein family","protein_coding"
"Cre02.g144350","No alias","Chlamydomonas reinhardtii","RAB GTPase homolog B1A","protein_coding"
"Cre03.g145687","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding"
"Cre03.g162500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g162850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g163850","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre03.g173132","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g178650","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre03.g180050","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre03.g180350","No alias","Chlamydomonas reinhardtii","cyclin-dependent kinase-subunit 1","protein_coding"
"Cre03.g189450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g191100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g194750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g199400","No alias","Chlamydomonas reinhardtii","origin recognition complex second largest subunit 2","protein_coding"
"Cre03.g200700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g205361","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g211700","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with  ABF2","protein_coding"
"Cre04.g211800","No alias","Chlamydomonas reinhardtii","Ribosomal protein L14p/L23e family protein","protein_coding"
"Cre04.g213050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g214350","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding"
"Cre04.g226350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g232303","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g233102","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232751","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g233350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234637","No alias","Chlamydomonas reinhardtii","Ribosomal protein S8 family protein","protein_coding"
"Cre05.g235750","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding"
"Cre05.g239200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g239800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g241637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g243900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g272800","No alias","Chlamydomonas reinhardtii","Ribosomal protein S8e family protein","protein_coding"
"Cre06.g272950","No alias","Chlamydomonas reinhardtii","Ribosomal protein S13/S18 family","protein_coding"
"Cre06.g273600","No alias","Chlamydomonas reinhardtii","Ribosomal protein S27a / Ubiquitin family protein","protein_coding"
"Cre06.g275200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278135","No alias","Chlamydomonas reinhardtii","Translation protein SH3-like family protein","protein_coding"
"Cre06.g278146","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278178","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278194","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g281750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g285650","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 6","protein_coding"
"Cre06.g288100","No alias","Chlamydomonas reinhardtii","mRNAadenosine methylase","protein_coding"
"Cre06.g295700","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g312350","No alias","Chlamydomonas reinhardtii","DNA primases;DNA primases","protein_coding"
"Cre07.g316850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g317100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g323300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g323400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g325650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g325716","No alias","Chlamydomonas reinhardtii","DNA ligase 1","protein_coding"
"Cre07.g331900","No alias","Chlamydomonas reinhardtii","ribosomal protein S13A","protein_coding"
"Cre07.g337750","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase superfamily protein","protein_coding"
"Cre07.g338000","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g350450","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding"
"Cre07.g354750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g355200","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 5","protein_coding"
"Cre07.g357850","No alias","Chlamydomonas reinhardtii","Ribosomal L22e protein family","protein_coding"
"Cre08.g358537","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g361063","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g362450","No alias","Chlamydomonas reinhardtii","alpha-amylase-like 3","protein_coding"
"Cre08.g376350","No alias","Chlamydomonas reinhardtii","ASF1 like histone chaperone","protein_coding"
"Cre08.g381000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g390150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g393600","No alias","Chlamydomonas reinhardtii","DNA replication protein-related","protein_coding"
"Cre09.g394658","No alias","Chlamydomonas reinhardtii","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Cre09.g409000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g412400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g420750","No alias","Chlamydomonas reinhardtii","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"Cre10.g422718","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g424250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g440200","No alias","Chlamydomonas reinhardtii","structural maintenance of chromosomes 5","protein_coding"
"Cre10.g441250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g441700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g447050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g448600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g450200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g452300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g455850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre10.g457850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g458700","No alias","Chlamydomonas reinhardtii","stress-inducible protein, putative","protein_coding"
"Cre10.g459250","No alias","Chlamydomonas reinhardtii","Ribosomal protein L35Ae family protein","protein_coding"
"Cre10.g467150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467578","No alias","Chlamydomonas reinhardtii","Ribosomal L28e protein family","protein_coding"
"Cre11.g467582","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467685","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g481082","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g482700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g483351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding"
"Cre12.g490550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g494050","No alias","Chlamydomonas reinhardtii","Ribosomal protein L6 family","protein_coding"
"Cre12.g497650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g498900","No alias","Chlamydomonas reinhardtii","Ribosomal protein S7e family protein","protein_coding"
"Cre12.g499601","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g504200","No alias","Chlamydomonas reinhardtii","Ribosomal protein S12/S23 family protein","protein_coding"
"Cre12.g507100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g511050","No alias","Chlamydomonas reinhardtii","DNAJ heat shock family protein","protein_coding"
"Cre12.g511750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512600","No alias","Chlamydomonas reinhardtii","ribosomal protein L18","protein_coding"
"Cre12.g514500","No alias","Chlamydomonas reinhardtii","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Cre12.g515850","No alias","Chlamydomonas reinhardtii","proliferating cellular nuclear antigen 1","protein_coding"
"Cre12.g525500","No alias","Chlamydomonas reinhardtii","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Cre12.g529400","No alias","Chlamydomonas reinhardtii","ribosomal protein S27","protein_coding"
"Cre12.g532550","No alias","Chlamydomonas reinhardtii","Ribosomal protein L13 family protein","protein_coding"
"Cre12.g533650","No alias","Chlamydomonas reinhardtii","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein","protein_coding"
"Cre12.g536100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g542400","No alias","Chlamydomonas reinhardtii","damaged DNA binding;DNA-directed DNA polymerases","protein_coding"
"Cre13.g568900","No alias","Chlamydomonas reinhardtii","Ribosomal protein L22p/L17e family protein","protein_coding"
"Cre13.g606450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g608900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g620050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g621250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g623125","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g633450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g651000","No alias","Chlamydomonas reinhardtii","Replication factor-A protein 1-related","protein_coding"
"Cre16.g658600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g659450","No alias","Chlamydomonas reinhardtii","alpha 1,4-glycosyltransferase family protein","protein_coding"
"Cre16.g660150","No alias","Chlamydomonas reinhardtii","Ribosomal protein S10p/S20e family protein","protein_coding"
"Cre16.g661050","No alias","Chlamydomonas reinhardtii","Ribosomal protein L34e superfamily protein","protein_coding"
"Cre16.g667850","No alias","Chlamydomonas reinhardtii","DUTP-PYROPHOSPHATASE-LIKE 1","protein_coding"
"Cre16.g667900","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding"
"Cre16.g674152","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g679950","No alias","Chlamydomonas reinhardtii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Cre16.g684155","No alias","Chlamydomonas reinhardtii","zinc ion binding","protein_coding"
"Cre16.g690207","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g692750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g694800","No alias","Chlamydomonas reinhardtii","Arabidopsis thaliana protein of unknown function (DUF821)","protein_coding"
"Cre17.g701350","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Cre17.g701650","No alias","Chlamydomonas reinhardtii","Ribosomal L27e protein family","protein_coding"
"Cre17.g705100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g712450","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF1767)","protein_coding"
"Cre17.g715150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g718850","No alias","Chlamydomonas reinhardtii","replication protein A 1A","protein_coding"
"Cre17.g726500","No alias","Chlamydomonas reinhardtii","origin recognition complex subunit 4","protein_coding"
"Cre17.g729200","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF607)","protein_coding"
"Cre17.g732150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g732566","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g746347","No alias","Chlamydomonas reinhardtii","uracil dna glycosylase","protein_coding"
"Cre19.g750897","No alias","Chlamydomonas reinhardtii","Cytidine/deoxycytidylate deaminase family protein","protein_coding"
"Cre23.g754647","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_105.1","No alias","Porphyridium purpureum","(at2g22730 : 98.2) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G65687.1); Has 17716 Blast hits to 17664 proteins in 2057 species: Archae - 323; Bacteria - 13331; Metazoa - 891; Fungi - 1841; Plants - 194; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2017.13","No alias","Porphyridium purpureum","(q9fs87|ivd2_soltu : 228.0) Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor (EC 1.3.99.10) (IVD 2) (Fragment) - Solanum tuberosum (Potato) & (at3g45300 : 222.0) Encodes isovaleryl-coenzyme a dehydrogenase.  Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2019.15","No alias","Porphyridium purpureum","(q9mbd8|bi1_orysa : 108.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (at5g47120 : 103.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1.  Functions as an attenuator of biotic and abiotic types of cell death.  Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2019.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.32","No alias","Porphyridium purpureum","(at5g63770 : 145.0) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.; diacylglycerol kinase 2 (DGK2); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Diacylglycerol kinase, accessory domain (InterPro:IPR000756); BEST Arabidopsis thaliana protein match is: diacylglycerol kinase1 (TAIR:AT5G07920.1); Has 2044 Blast hits to 1731 proteins in 371 species: Archae - 0; Bacteria - 465; Metazoa - 1092; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2024.16","No alias","Porphyridium purpureum","(p05434|catr_chlre : 126.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at5g37780 : 109.0) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2024.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2024.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2025.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2025.41","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2031.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2036.15","No alias","Porphyridium purpureum","(at1g73990 : 400.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2041.3","No alias","Porphyridium purpureum","(at2g02760 : 181.0) ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.; ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink). & (p25866|ubc2_wheat : 178.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2042.4","No alias","Porphyridium purpureum","(at1g44900 : 727.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 303.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1454.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2044.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2048.10","No alias","Porphyridium purpureum","(at3g23580 : 461.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase  of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.; ribonucleotide reductase 2A (RNR2A); CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Ferritin/ribonucleotide reductase-like family protein (TAIR:AT3G27060.1); Has 9602 Blast hits to 9597 proteins in 2376 species: Archae - 34; Bacteria - 4358; Metazoa - 261; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3795 (source: NCBI BLink). & (p49730|rir2_tobac : 453.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2057.11","No alias","Porphyridium purpureum","(at3g22950 : 186.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.; ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1). & (p51824|arf1_soltu : 175.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2059.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2059.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2060.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2066.3","No alias","Porphyridium purpureum","(at5g37500 : 118.0) Encodes a guard cell outward potassium channel.  Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2066.5","No alias","Porphyridium purpureum","(at1g21070 : 121.0) Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G76670.1); Has 2012 Blast hits to 2008 proteins in 220 species: Archae - 0; Bacteria - 26; Metazoa - 397; Fungi - 317; Plants - 1060; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2070.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2073.11","No alias","Porphyridium purpureum","(at1g48310 : 229.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 101.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2073.5","No alias","Porphyridium purpureum","(p37832|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7 tubulin) (pTUB22) - Oryza sativa (Rice) & (at5g12250 : 681.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1362.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2080.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2084.13","No alias","Porphyridium purpureum","(o48653|dpola_orysa : 558.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 531.0) Encodes the putative catalytic subunit of the DNA polymerase alpha.  Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1062.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2088.4","No alias","Porphyridium purpureum","(at4g31790 : 296.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2089.9","No alias","Porphyridium purpureum","(at5g63620 : 120.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G64710.1); Has 51156 Blast hits to 51010 proteins in 3327 species: Archae - 886; Bacteria - 33078; Metazoa - 1881; Fungi - 3909; Plants - 3940; Viruses - 3; Other Eukaryotes - 7459 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2090.25","No alias","Porphyridium purpureum","(at4g23430 : 151.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39617|por_chlre : 85.5) Protochlorophyllide reductase, chloroplast precursor (EC 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) - Chlamydomonas reinhardtii & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2090.45","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.7","No alias","Porphyridium purpureum","(at4g21860 : 149.0) methionine sulfoxide reductase B 2 (MSRB2); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B3 (TAIR:AT4G04800.1). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2100.8","No alias","Porphyridium purpureum","(at5g22110 : 178.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2102.13","No alias","Porphyridium purpureum","(q949m3|fabg3_brana : 283.0) 3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 3) - Brassica napus (Rape) & (at1g24360 : 282.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2102.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2104.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2114.1","No alias","Porphyridium purpureum","(at3g25580 : 111.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin domain-containing protein 9 homolog (TAIR:AT2G18990.1); Has 1084 Blast hits to 1084 proteins in 275 species: Archae - 18; Bacteria - 74; Metazoa - 392; Fungi - 176; Plants - 221; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2121.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2126.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2126.7","No alias","Porphyridium purpureum","(at5g12470 : 136.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2130.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2133.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2146.14","No alias","Porphyridium purpureum","(at1g19880 : 171.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2149.20","No alias","Porphyridium purpureum","(at5g46280 : 571.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 491.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1142.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2150.8","No alias","Porphyridium purpureum","(q08632|sdr1_picab : 94.4) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (at5g18210 : 92.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Polyketide synthase/Fatty acid synthase, KR (InterPro:IPR020842), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03980.1); Has 123037 Blast hits to 122812 proteins in 3600 species: Archae - 990; Bacteria - 80816; Metazoa - 6327; Fungi - 6724; Plants - 2865; Viruses - 2; Other Eukaryotes - 25313 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2154.13","No alias","Porphyridium purpureum",""(at1g08970 : 179.0) heme activated protein (HAP5c); ""nuclear factor Y, subunit C9"" (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2157.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2171.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2177.6","No alias","Porphyridium purpureum","(at4g32390 : 129.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT2G25520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2181.5","No alias","Porphyridium purpureum","(at1g68200 : 88.2) Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G66810.1); Has 1170 Blast hits to 1062 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 305; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2186.8","No alias","Porphyridium purpureum","(q39817|calx_soybn : 217.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g07340 : 213.0) Calreticulin family protein; FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: calnexin 1 (TAIR:AT5G61790.1). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2194.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2199.5","No alias","Porphyridium purpureum","(at5g17230 : 298.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (p37272|psy_capan : 297.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (reliability: 596.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2210.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2223.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2251.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2275.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2275.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2283.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2287.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2287.6","No alias","Porphyridium purpureum","(at2g27170 : 345.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2290.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2290.6","No alias","Porphyridium purpureum","(at1g71810 : 308.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2294.1","No alias","Porphyridium purpureum","(p52782|glna_luplu : 423.0) Glutamine synthetase nodule isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS) - Lupinus luteus (European yellow lupin) & (at5g35630 : 413.0) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (reliability: 826.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2305.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2306.4","No alias","Porphyridium purpureum","(at3g54630 : 120.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2324.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2327.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2345.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2345.9","No alias","Porphyridium purpureum","(at3g08850 : 227.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs.  RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients.   Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2347.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2348.7","No alias","Porphyridium purpureum","(at3g12530 : 99.4) PSF2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Psf2 (InterPro:IPR007257), GINS complex, subunit Psf2, subgroup (InterPro:IPR016906); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2349.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2349.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2358.2","No alias","Porphyridium purpureum","(at3g62600 : 100.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR.  EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2401.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2452.1","No alias","Porphyridium purpureum","(at4g35140 : 85.9) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2452.2","No alias","Porphyridium purpureum","(at1g20930 : 332.0) Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.; cyclin-dependent kinase B2;2 (CDKB2;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;1 (TAIR:AT1G76540.1); Has 109034 Blast hits to 107606 proteins in 3051 species: Archae - 93; Bacteria - 11427; Metazoa - 41458; Fungi - 12141; Plants - 24398; Viruses - 437; Other Eukaryotes - 19080 (source: NCBI BLink). & (q38774|cdc2c_antma : 326.0) Cell division control protein 2 homolog C (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2460.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2493.6","No alias","Porphyridium purpureum","(at2g22250 : 89.4) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2504.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2505.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2518.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2663.1","No alias","Porphyridium purpureum","(at4g16440 : 162.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (q43644|ndus1_soltu : 117.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2695.3","No alias","Porphyridium purpureum","(at1g48360 : 207.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3388.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3391.6","No alias","Porphyridium purpureum","(at2g40840 : 448.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity.   It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins.  On the other hand, arabinose and fructose were not efficiently used.  Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 86.7) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 896.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3392.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3392.8","No alias","Porphyridium purpureum","(at2g21060 : 96.3) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (p27484|grp2_nicsy : 92.8) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_3396.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3399.4","No alias","Porphyridium purpureum","(at1g06290 : 454.0) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.; acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (o64894|acox2_cucma : 330.0) Acyl-coenzyme A oxidase, peroxisomal precursor (EC 1.3.3.6) (AOX) (Long-chain acyl-CoA oxidase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 908.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3401.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3407.6","No alias","Porphyridium purpureum","(at5g07590 : 177.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3412.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3415.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.16","No alias","Porphyridium purpureum","(at3g24515 : 142.0) ubiquitin-conjugating enzyme 37 (UBC37); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 11 (TAIR:AT3G08690.2); Has 10163 Blast hits to 10152 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4605; Fungi - 2137; Plants - 1818; Viruses - 27; Other Eukaryotes - 1574 (source: NCBI BLink). & (p25866|ubc2_wheat : 90.5) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3418.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3420.4","No alias","Porphyridium purpureum","(at4g15880 : 152.0) EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering.   Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.; EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3422.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.10","No alias","Porphyridium purpureum","(at5g13780 : 217.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.9","No alias","Porphyridium purpureum","(at1g26410 : 107.0) FAD-binding Berberine family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26420.1); Has 4489 Blast hits to 4292 proteins in 637 species: Archae - 40; Bacteria - 1906; Metazoa - 5; Fungi - 1692; Plants - 699; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3427.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3428.1","No alias","Porphyridium purpureum","(at5g61970 : 213.0) signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3428.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3435.2","No alias","Porphyridium purpureum","(at5g10980 : 245.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 243.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3438.3","No alias","Porphyridium purpureum","(q2qmg2|mcca_orysa : 381.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (at1g03090 : 380.0) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.; MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 41492 Blast hits to 34824 proteins in 3674 species: Archae - 718; Bacteria - 26555; Metazoa - 1797; Fungi - 1117; Plants - 802; Viruses - 0; Other Eukaryotes - 10503 (source: NCBI BLink). & (gnl|cdd|68872 : 80.1) no description available & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3440.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3440.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3440.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3440.8","No alias","Porphyridium purpureum","(at5g26740 : 155.0) Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3440.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3456.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3456.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3463.4","No alias","Porphyridium purpureum","(at5g22220 : 120.0) Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor.; E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3467.7","No alias","Porphyridium purpureum","(at1g67630 : 101.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3470.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3470.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3470.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3475.3","No alias","Porphyridium purpureum","(q00268|pcna1_dauca : 227.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Daucus carota (Carrot) & (at1g07370 : 226.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3481.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3488.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3489.1","No alias","Porphyridium purpureum","(at5g55060 : 80.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_3494.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3504.1","No alias","Porphyridium purpureum","(at1g14570 : 108.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3506.5","No alias","Porphyridium purpureum","(at5g63400 : 244.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (q08480|kad2_orysa : 240.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3510.8","No alias","Porphyridium purpureum","(at4g07390 : 103.0) Mannose-P-dolichol utilization defect 1 protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Mannose-P-dolichol utilization defect 1 protein (InterPro:IPR016817); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT5G59470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3522.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3522.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3524.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3537.4","No alias","Porphyridium purpureum","(at2g07690 : 633.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 282.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1266.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3537.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3551.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3552.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3565.3","No alias","Porphyridium purpureum","(at1g64650 : 341.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3568.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3573.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3587.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3598.5","No alias","Porphyridium purpureum","(at5g40440 : 135.0) encodes a mitogen-activated protein kinase kinase; mitogen-activated protein kinase kinase 3 (MKK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 6 (TAIR:AT5G56580.1); Has 122843 Blast hits to 121436 proteins in 4056 species: Archae - 133; Bacteria - 13736; Metazoa - 45702; Fungi - 12099; Plants - 30883; Viruses - 510; Other Eukaryotes - 19780 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 133.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3646.5","No alias","Porphyridium purpureum","(at1g21690 : 280.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (gnl|cdd|68872 : 87.0) no description available & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3690.5","No alias","Porphyridium purpureum","(at2g39770 : 439.0) Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis.  Mutations in this gene confer hypersensitivity to NH4+.; CYTOKINESIS DEFECTIVE 1 (CYT1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT3G55590.1). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3692.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3693.5","No alias","Porphyridium purpureum","(at5g41880 : 265.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3803.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3897.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_429.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_429.8","No alias","Porphyridium purpureum","(at2g26800 : 228.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_429.9","No alias","Porphyridium purpureum","(at5g44635 : 608.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 262.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_436.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_439.5","No alias","Porphyridium purpureum","(at2g17980 : 357.0) member of SLY1 Gene Family; ATSLY1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G31740.1); Has 1583 Blast hits to 1569 proteins in 233 species: Archae - 0; Bacteria - 15; Metazoa - 661; Fungi - 409; Plants - 204; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q851w1|sly1_orysa : 343.0) SEC1-family transport protein SLY1 - Oryza sativa (Rice) & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4402.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4402.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4408.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4408.4","No alias","Porphyridium purpureum","(at2g26060 : 174.0) embryo defective 1345 (emb1345); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G32990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4408.5","No alias","Porphyridium purpureum","(q9xfh3|mad2_maize : 179.0) Mitotic spindle checkpoint protein MAD2 - Zea mays (Maize) & (at3g25980 : 176.0) Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; MITOTIC ARREST-DEFICIENT 2 (MAD2); CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_441.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4413.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4416.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4416.9","No alias","Porphyridium purpureum","(at1g67320 : 211.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4420.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4422.7","No alias","Porphyridium purpureum","(q43209|pimt_wheat : 227.0) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) - Triticum aestivum (Wheat) & (at5g50240 : 226.0) L-isoaspartyl methyltransferase 2 (PIMT2)gene,  alternatively spliced.; protein-l-isoaspartate methyltransferase 2 (PIMT2); FUNCTIONS IN: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (InterPro:IPR000682); BEST Arabidopsis thaliana protein match is: protein-l-isoaspartate methyltransferase 1 (TAIR:AT3G48330.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4427.5","No alias","Porphyridium purpureum","(at5g66020 : 159.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.  non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4431.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4432.3","No alias","Porphyridium purpureum","(at1g32090 : 103.0) early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4433.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_444.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4440.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4443.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4443.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4447.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4447.5","No alias","Porphyridium purpureum","(at5g07290 : 211.0) AML4  A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices.; MEI2-like 4 (ML4); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: meristem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like protein 1 (TAIR:AT5G61960.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o65001|te1_maize : 121.0) Protein terminal ear1 - Zea mays (Maize) & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4448.17","No alias","Porphyridium purpureum","(at3g19950 : 129.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4448.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4455.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4461.9","No alias","Porphyridium purpureum","(at4g15470 : 135.0) Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4468.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4468.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4471.2","No alias","Porphyridium purpureum","(at3g55530 : 94.0) Encodes an intracellular membrane localized protein with E3 ligase activity that is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.; SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G04790.1); Has 9775 Blast hits to 9747 proteins in 287 species: Archae - 0; Bacteria - 6; Metazoa - 2690; Fungi - 760; Plants - 4971; Viruses - 89; Other Eukaryotes - 1259 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4476.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4483.4","No alias","Porphyridium purpureum","(o82626|erg_antma : 130.0) GTP-binding protein ERG - Antirrhinum majus (Garden snapdragon) & (at1g30960 : 128.0) GTP-binding family protein; FUNCTIONS IN: RNA binding, GTP binding; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Small GTP-binding protein (InterPro:IPR005225), GTP-binding protein Era (InterPro:IPR005662), GTP-binding protein, HSR1-related (InterPro:IPR002917), K homology-like, alpha/beta (InterPro:IPR015946); BEST Arabidopsis thaliana protein match is: RNA binding;GTP binding (TAIR:AT5G66470.1); Has 21534 Blast hits to 19384 proteins in 2851 species: Archae - 72; Bacteria - 16256; Metazoa - 383; Fungi - 140; Plants - 214; Viruses - 0; Other Eukaryotes - 4469 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4483.7","No alias","Porphyridium purpureum","(at2g42790 : 399.0) Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.; citrate synthase 3 (CSY3); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like (InterPro:IPR002020), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase active site (InterPro:IPR019810); BEST Arabidopsis thaliana protein match is: citrate synthase 2 (TAIR:AT3G58750.1); Has 13520 Blast hits to 13518 proteins in 3201 species: Archae - 174; Bacteria - 8544; Metazoa - 357; Fungi - 325; Plants - 176; Viruses - 0; Other Eukaryotes - 3944 (source: NCBI BLink). & (p49299|cysz_cucma : 394.0) Citrate synthase, glyoxysomal precursor (EC 2.3.3.1) (GCS) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4489.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4489.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4491.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_450.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4501.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_452.10","No alias","Porphyridium purpureum","(at5g17670 : 172.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_452.7","No alias","Porphyridium purpureum","(at5g47860 : 147.0) Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4535.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_454.4","No alias","Porphyridium purpureum","(at2g31400 : 140.0) Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.; genomes uncoupled 1 (GUN1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 66090 Blast hits to 15992 proteins in 322 species: Archae - 5; Bacteria - 98; Metazoa - 1298; Fungi - 977; Plants - 60012; Viruses - 1; Other Eukaryotes - 3699 (source: NCBI BLink). & (q76c99|rf1_orysa : 119.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4540.1","No alias","Porphyridium purpureum","(at5g19450 : 149.0) calcium-dependent protein kinase (CDPK19) mRNA, complete; calcium-dependent protein kinase 19 (CDPK19); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase 7 (TAIR:AT5G12480.1); Has 121368 Blast hits to 118532 proteins in 3727 species: Archae - 180; Bacteria - 14366; Metazoa - 46503; Fungi - 14729; Plants - 22919; Viruses - 459; Other Eukaryotes - 22212 (source: NCBI BLink). & (p49101|cdpk2_maize : 137.0) Calcium-dependent protein kinase 2 (EC 2.7.11.1) (CDPK 2) - Zea mays (Maize) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4556.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_458.1","No alias","Porphyridium purpureum","(at3g23600 : 86.7) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_461.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_461.7","No alias","Porphyridium purpureum","(at3g63410 : 288.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane.  Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (p23525|in37_spiol : 282.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4611.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_462.14","No alias","Porphyridium purpureum","(at5g53580 : 160.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (p40691|a115_tobac : 80.9) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_468.3","No alias","Porphyridium purpureum","(at5g66120 : 153.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_469.8","No alias","Porphyridium purpureum","(at3g05280 : 105.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT5G27490.1); Has 519 Blast hits to 518 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 115; Plants - 92; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_470.5","No alias","Porphyridium purpureum","(at2g14170 : 424.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase  6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (p17202|badh_spiol : 179.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 848.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_481.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_490.1","No alias","Porphyridium purpureum","(at4g02060 : 555.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 239.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.10","No alias","Porphyridium purpureum","(at2g16440 : 599.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 278.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1198.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_494.1","No alias","Porphyridium purpureum","(at2g26980 : 238.0) encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.; CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 234.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.5","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 134.0) no description available & (at5g07740 : 112.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (gnl|cdd|39774 : 82.5) no description available & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_510.12","No alias","Porphyridium purpureum","(q43844|ndus7_soltu : 258.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (at5g11770 : 251.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_510.19","No alias","Porphyridium purpureum","(at5g19320 : 167.0) Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.; RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_510.3","No alias","Porphyridium purpureum","(at3g44530 : 196.0) Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2.; homolog of histone chaperone HIRA (HIRA); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), TUP1-like enhancer of split (InterPro:IPR011494), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G64630.2). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_516.13","No alias","Porphyridium purpureum","(at4g11030 : 404.0) AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: fatty acid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G23850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p17814|4cl1_orysa : 117.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Oryza sativa (Rice) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_516.3","No alias","Porphyridium purpureum","(at1g67730 : 87.8) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_518.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.24","No alias","Porphyridium purpureum","(at5g23050 : 118.0) acyl-activating enzyme 17 (AAE17); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 18 (TAIR:AT1G55320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_528.5","No alias","Porphyridium purpureum","(at5g43340 : 149.0) Encodes Pht1;6, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;6 (PHT1;6); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_533.3","No alias","Porphyridium purpureum","(p16868|h2b4_volca : 127.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at2g28720 : 123.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 3535 Blast hits to 3431 proteins in 349 species: Archae - 0; Bacteria - 57; Metazoa - 2253; Fungi - 226; Plants - 491; Viruses - 2; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_535.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_537.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_539.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_540.1","No alias","Porphyridium purpureum","(at2g23290 : 141.0) Member of the R2R3 factor gene family.; myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink). & (p93417|gam1_orysa : 106.0) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_541.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_544.9","No alias","Porphyridium purpureum","(at3g21620 : 101.0) ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G15430.2); Has 1522 Blast hits to 1336 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 725; Plants - 435; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_558.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_567.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_567.4","No alias","Porphyridium purpureum","(at2g40550 : 167.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_568.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_568.8","No alias","Porphyridium purpureum","(at1g31160 : 140.0) Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined.; HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2); FUNCTIONS IN: protein kinase C binding, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HIS triad family protein 3 (TAIR:AT3G56490.1); Has 8225 Blast hits to 8223 proteins in 2654 species: Archae - 159; Bacteria - 5014; Metazoa - 405; Fungi - 167; Plants - 130; Viruses - 0; Other Eukaryotes - 2350 (source: NCBI BLink). & (p42856|zb14_maize : 129.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_578.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_578.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_583.2","No alias","Porphyridium purpureum","(at3g02780 : 205.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_589.1","No alias","Porphyridium purpureum","(at5g17630 : 261.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49131|tpt_flapr : 219.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Flaveria pringlei & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_590.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_602.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_605.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_614.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_616.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_625.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_625.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_628.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_635.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_639.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_639.3","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_666.4","No alias","Porphyridium purpureum","(at3g27925 : 235.0) Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen.  Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.; DegP protease 1 (DEGP1); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis, protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: Trypsin family protein with PDZ domain (TAIR:AT5G39830.1); Has 16838 Blast hits to 16778 proteins in 2643 species: Archae - 108; Bacteria - 11023; Metazoa - 354; Fungi - 149; Plants - 421; Viruses - 7; Other Eukaryotes - 4776 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_670.2","No alias","Porphyridium purpureum","(at5g53400 : 132.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_681.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_693.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_731.1","No alias","Porphyridium purpureum","(at5g39440 : 177.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 165.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_741.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_746.1","No alias","Porphyridium purpureum","(at1g17980 : 224.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 1 (PAPS1); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: poly(A) polymerase 2 (TAIR:AT2G25850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.137","No alias","Cyanophora paradoxa","(at1g23360 : 135.0) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.241","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.93","No alias","Cyanophora paradoxa","(at4g02460 : 221.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.31","No alias","Cyanophora paradoxa","(at5g50440 : 124.0) member of Membrin Gene Family; membrin 12 (MEMB12); BEST Arabidopsis thaliana protein match is: membrin 11 (TAIR:AT2G36900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.121","No alias","Cyanophora paradoxa","(q9xfg3|tbg_phypa : 270.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at5g05620 : 262.0) Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin  complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.122","No alias","Cyanophora paradoxa","(q9xfg3|tbg_phypa : 385.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at5g05620 : 376.0) Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin  complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000128.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.164","No alias","Cyanophora paradoxa","(at2g16440 : 634.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 294.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.188","No alias","Cyanophora paradoxa","(at5g66750 : 92.4) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 80.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.30","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000147.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000158.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000169.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000189.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000189.50","No alias","Cyanophora paradoxa","(at2g47980 : 176.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.128","No alias","Cyanophora paradoxa","(at3g49660 : 97.1) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000227.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.42","No alias","Cyanophora paradoxa","(o48653|dpola_orysa : 568.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 554.0) Encodes the putative catalytic subunit of the DNA polymerase alpha.  Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.139","No alias","Cyanophora paradoxa","(at3g21110 : 313.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.144","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000241.188","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.38","No alias","Cyanophora paradoxa","(at4g02060 : 657.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 291.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000310.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.9","No alias","Cyanophora paradoxa","(at5g41880 : 330.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000350.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000378.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000382.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000388.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000448.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000525.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000525.8","No alias","Cyanophora paradoxa","(at5g17550 : 104.0) peroxin 19-2 (PEX19-2); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-1 (TAIR:AT3G03490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000545.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000551.12","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000553.35","No alias","Cyanophora paradoxa","(at1g76760 : 124.0) Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.; thioredoxin Y1 (TY1); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: glycerol ether metabolic process, cell redox homeostasis; LOCATED IN: chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin (InterPro:IPR005746), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin Y2 (TAIR:AT1G43560.1); Has 23491 Blast hits to 21806 proteins in 3039 species: Archae - 310; Bacteria - 12245; Metazoa - 3466; Fungi - 1226; Plants - 1976; Viruses - 18; Other Eukaryotes - 4250 (source: NCBI BLink). & (p23400|trxm_chlre : 100.0) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000571.19","No alias","Cyanophora paradoxa","(at2g19330 : 115.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000600.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.26","No alias","Cyanophora paradoxa","(at4g35740 : 207.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.49","No alias","Cyanophora paradoxa","(at1g01910 : 353.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000624.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000632.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000655.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.35","No alias","Cyanophora paradoxa","(at3g06010 : 234.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 220.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000692.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.81","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.66","No alias","Cyanophora paradoxa","(at2g20280 : 195.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 6263 Blast hits to 4194 proteins in 354 species: Archae - 14; Bacteria - 176; Metazoa - 2274; Fungi - 740; Plants - 301; Viruses - 209; Other Eukaryotes - 2549 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.46","No alias","Cyanophora paradoxa","(at2g27170 : 471.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000718.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000718.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.5","No alias","Cyanophora paradoxa","(at4g12620 : 196.0) Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime.; origin of replication complex 1B (ORC1B); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Origin recognition complex, subunit 1 (InterPro:IPR020793), ATPase, AAA+ type, core (InterPro:IPR003593), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: origin recognition complex 1 (TAIR:AT4G14700.1); Has 5914 Blast hits to 5512 proteins in 383 species: Archae - 477; Bacteria - 4; Metazoa - 3209; Fungi - 806; Plants - 927; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000754.31","No alias","Cyanophora paradoxa","(at1g08130 : 306.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 80.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.41","No alias","Cyanophora paradoxa","(at1g27880 : 173.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.15","No alias","Cyanophora paradoxa","(at5g58230 : 455.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000836.12","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000842.7","No alias","Cyanophora paradoxa","(at2g47020 : 276.0) Peptide chain release factor 1; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT3G62910.1); Has 16260 Blast hits to 16258 proteins in 2815 species: Archae - 0; Bacteria - 10372; Metazoa - 189; Fungi - 181; Plants - 204; Viruses - 13; Other Eukaryotes - 5301 (source: NCBI BLink). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000849.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000849.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000852.31","No alias","Cyanophora paradoxa","(at5g11500 : 132.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000852.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.46","No alias","Cyanophora paradoxa","(at3g12300 : 295.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000889.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000903.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000949.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000980.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001003.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001003.39","No alias","Cyanophora paradoxa","(at1g56590 : 136.0) Involved in vesicle trafficking  between the trans -Golgi network and vacuoles.; ZIG SUPPRESSOR 4 (ZIP4); INVOLVED IN: intracellular protein transport, gravitropism, protein targeting to vacuole; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 1984 Blast hits to 1954 proteins in 323 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 482; Plants - 226; Viruses - 0; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001007.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.15","No alias","Cyanophora paradoxa","(at1g57820 : 133.0) Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro.  The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.; VARIANT IN METHYLATION 1 (VIM1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), SRA-YDG (InterPro:IPR003105), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G57800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001030.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001041.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.17","No alias","Cyanophora paradoxa","(at3g12760 : 233.0) CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001052.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001056.19","No alias","Cyanophora paradoxa","(at2g21470 : 275.0) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation.  Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 2 (SAE2); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: E1 C-terminal related 1 (TAIR:AT5G19180.1). & (p31251|ube12_wheat : 135.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001065.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001085.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.23","No alias","Cyanophora paradoxa","(at2g20050 : 131.0) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.26","No alias","Cyanophora paradoxa","(at2g41100 : 82.0) encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers.; TOUCH 3 (TCH3); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001181.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001181.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.10","No alias","Cyanophora paradoxa","(at3g62910 : 428.0) Isolated in a screen for chloroplast development mutants. Pale green, albino seedlings arrest early in seedling development.; ALBINO AND PALE GREEN (APG3); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, chloroplast organization; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide chain release factor 1 (InterPro:IPR004373), Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 1 (TAIR:AT2G47020.1); Has 17224 Blast hits to 17222 proteins in 2820 species: Archae - 0; Bacteria - 10525; Metazoa - 262; Fungi - 197; Plants - 224; Viruses - 13; Other Eukaryotes - 6003 (source: NCBI BLink). & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001214.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001224.8","No alias","Cyanophora paradoxa","(at3g18524 : 614.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 591.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001229.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001249.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001254.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001264.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001333.30","No alias","Cyanophora paradoxa","(at1g04730 : 146.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001336.2","No alias","Cyanophora paradoxa","(at3g16857 : 82.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001366.6","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00001374.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001466.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001466.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001487.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001542.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.7","No alias","Cyanophora paradoxa","(q9lre6|dpod1_orysa : 1007.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1000.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 2000.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020510.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.155","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.188","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.74","No alias","Cyanophora paradoxa","(at3g05625 : 120.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 330 Blast hits to 328 proteins in 146 species: Archae - 14; Bacteria - 241; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.77","No alias","Cyanophora paradoxa","(at1g44900 : 595.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 207.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1190.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020560.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.29","No alias","Cyanophora paradoxa","(at2g28840 : 85.5) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020564.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.34","No alias","Cyanophora paradoxa","(at1g74770 : 172.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.22","No alias","Cyanophora paradoxa","(at1g79380 : 215.0) Ca(2)-dependent phospholipid-binding protein (Copine) family; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: RING domain ligase2 (TAIR:AT5G14420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.146","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.86","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.87","No alias","Cyanophora paradoxa","(at2g20050 : 117.0) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020816.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020825.19","No alias","Cyanophora paradoxa","(at2g13370 : 429.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 344.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.27","No alias","Cyanophora paradoxa","(at5g49470 : 174.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT1G67890.1). & (q5qn75|m2k1_orysa : 96.3) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.39","No alias","Cyanophora paradoxa","(at5g40530 : 206.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-related (InterPro:IPR007823); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41651|cypb_vicfa : 92.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.59","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020848.68","No alias","Cyanophora paradoxa","(at1g67320 : 337.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020875.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.113","No alias","Cyanophora paradoxa","(at1g60500 : 220.0) Dynamin related protein 4C (DRP4C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375), Interferon-induced Mx protein (InterPro:IPR015577); BEST Arabidopsis thaliana protein match is: Dynamin related protein 4A (TAIR:AT1G60530.1); Has 2653 Blast hits to 2628 proteins in 285 species: Archae - 0; Bacteria - 0; Metazoa - 1034; Fungi - 820; Plants - 506; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.3","No alias","Cyanophora paradoxa","(at3g04810 : 212.0) Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 2 (NEK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 3 (TAIR:AT5G28290.1); Has 124376 Blast hits to 122221 proteins in 4182 species: Archae - 113; Bacteria - 14280; Metazoa - 45892; Fungi - 12262; Plants - 30619; Viruses - 487; Other Eukaryotes - 20723 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 129.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020911.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.93","No alias","Cyanophora paradoxa","(at5g20930 : 230.0) Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.; TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020918.5","No alias","Cyanophora paradoxa","(at5g44635 : 634.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 243.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020930.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020941.47","No alias","Cyanophora paradoxa","(at4g20760 : 103.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.23","No alias","Cyanophora paradoxa","(at5g10260 : 108.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (q40723|rgp2_orysa : 107.0) Ras-related protein RGP2 (GTP-binding regulatory protein RGP2) - Oryza sativa (Rice) & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020964.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020964.22","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021017.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021070.70","No alias","Cyanophora paradoxa","(at2g29680 : 205.0) Encodes cell division control protein 6 (CDC6).; cell division control 6 (CDC6); FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: Cell division control, Cdc6 (TAIR:AT1G07270.1); Has 1385 Blast hits to 1377 proteins in 339 species: Archae - 397; Bacteria - 0; Metazoa - 348; Fungi - 289; Plants - 116; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.72","No alias","Cyanophora paradoxa","(at1g21980 : 125.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 115.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.75","No alias","Cyanophora paradoxa","(q9ssy6|etr1_cucsa : 118.0) Ethylene receptor (EC 2.7.13.3) (CS-ETR1) - Cucumis sativus (Cucumber) & (at2g01830 : 114.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021073.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021108.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021244.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021254.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021257.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021293.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021312.11","No alias","Cyanophora paradoxa","(p25011|ccnb1_soybn : 141.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at4g35620 : 135.0) Cyclin B2;2 (CYCB2;2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;1 (TAIR:AT2G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021318.71","No alias","Cyanophora paradoxa","(at5g63200 : 92.8) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 18351 Blast hits to 10064 proteins in 1197 species: Archae - 736; Bacteria - 8120; Metazoa - 2665; Fungi - 514; Plants - 588; Viruses - 0; Other Eukaryotes - 5728 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021319.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.40","No alias","Cyanophora paradoxa","(at5g46280 : 487.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 436.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.16","No alias","Cyanophora paradoxa","(at5g17440 : 165.0) LUC7 related protein; CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT3G03340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.2","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021432.18","No alias","Cyanophora paradoxa","(at1g10510 : 112.0) embryo defective 2004 (emb2004); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 21704 Blast hits to 6781 proteins in 315 species: Archae - 0; Bacteria - 982; Metazoa - 9646; Fungi - 490; Plants - 1111; Viruses - 0; Other Eukaryotes - 9475 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021432.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021462.13","No alias","Cyanophora paradoxa","(at3g54610 : 310.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis.  It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG.  In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been  previously acetylated on K9 both serve as excellent substrates  for HAG1-catalyzed acetylation. However, prior acetylation  of H3 lysine 14 blocks radioactive acetylation of the  peptide by HAG1.  HAG1 is specific for  histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021463.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.35","No alias","Cyanophora paradoxa","(at1g72550 : 507.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1014.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.55","No alias","Cyanophora paradoxa","(at5g03940 : 420.0) mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit; chloroplast signal recognition particle 54 kDa subunit (CPSRP54); FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding, signal sequence binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; LOCATED IN: chloroplast stroma, chloroplast, signal recognition particle, chloroplast targeting, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP (InterPro:IPR004780), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49969|sr542_horvu : 199.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021521.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021522.3","No alias","Cyanophora paradoxa","(at5g49310 : 83.6) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 5 (IMPA-5); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021525.21","No alias","Cyanophora paradoxa","(at1g10510 : 89.0) embryo defective 2004 (emb2004); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 21704 Blast hits to 6781 proteins in 315 species: Archae - 0; Bacteria - 982; Metazoa - 9646; Fungi - 490; Plants - 1111; Viruses - 0; Other Eukaryotes - 9475 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021531.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021534.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021589.18","No alias","Cyanophora paradoxa","(at2g35890 : 201.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 25 (CPK25); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 110743 Blast hits to 108941 proteins in 2972 species: Archae - 173; Bacteria - 14302; Metazoa - 39605; Fungi - 12638; Plants - 23064; Viruses - 489; Other Eukaryotes - 20472 (source: NCBI BLink). & (p53683|cdpk2_orysa : 180.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021616.10","No alias","Cyanophora paradoxa","(at4g25540 : 375.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).; homolog of DNA mismatch repair protein MSH3 (MSH3); CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153; Bacteria - 9793; Metazoa - 705; Fungi - 864; Plants - 451; Viruses - 3; Other Eukaryotes - 2578 (source: NCBI BLink). & (q9xgc9|msh2_maize : 143.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021616.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021720.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021721.4","No alias","Cyanophora paradoxa","(at3g53580 : 202.0) diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"Glyma.01G016400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G026400","No alias","Glycine max","armadillo repeat only 4","protein_coding"
"Glyma.01G072000","No alias","Glycine max","F-box/RNI-like superfamily protein","protein_coding"
"Glyma.01G187400","No alias","Glycine max","DNA-directed DNA polymerases","protein_coding"
"Glyma.02G064600","No alias","Glycine max","agenet domain-containing protein","protein_coding"
"Glyma.02G080700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G107300","No alias","Glycine max","zinc finger homeodomain  1","protein_coding"
"Glyma.02G211800","No alias","Glycine max","auxin F-box protein 5","protein_coding"
"Glyma.02G276700","No alias","Glycine max","RING-H2 finger C1A","protein_coding"
"Glyma.02G305600","No alias","Glycine max","HEAT SHOCK PROTEIN 89.1","protein_coding"
"Glyma.03G186300","No alias","Glycine max","phosphatidyl inositol monophosphate 5 kinase","protein_coding"
"Glyma.03G201100","No alias","Glycine max","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Glyma.03G219200","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.04G033100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G076700","No alias","Glycine max","oligouridylate binding protein 1B","protein_coding"
"Glyma.04G204100","No alias","Glycine max","inhibitor-3","protein_coding"
"Glyma.04G222000","No alias","Glycine max","E2F target gene 1","protein_coding"
"Glyma.04G250200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G002400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G055700","No alias","Glycine max","beta vacuolar processing enzyme","protein_coding"
"Glyma.05G129700","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.05G150500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G152100","No alias","Glycine max","serine hydroxymethyltransferase 4","protein_coding"
"Glyma.05G174700","No alias","Glycine max","Protein of unknown function (DUF707)","protein_coding"
"Glyma.05G190300","No alias","Glycine max","Plant invertase/pectin methylesterase inhibitor superfamily","protein_coding"
"Glyma.05G190800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.05G204000","No alias","Glycine max","SUMO-activating enzyme 1B","protein_coding"
"Glyma.06G033100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G046200","No alias","Glycine max","cyclin d5;1","protein_coding"
"Glyma.06G082000","No alias","Glycine max","Sulfite exporter TauE/SafE family protein","protein_coding"
"Glyma.06G090401","No alias","Glycine max","xylulose kinase-2","protein_coding"
"Glyma.06G112600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.06G143400","No alias","Glycine max","E2F target gene 1","protein_coding"
"Glyma.06G150701","No alias","Glycine max","protein kinase family protein","protein_coding"
"Glyma.06G155200","No alias","Glycine max","Sodium/calcium exchanger family protein","protein_coding"
"Glyma.06G155300","No alias","Glycine max","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding"
"Glyma.06G155500","No alias","Glycine max","Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding"
"Glyma.06G161300","No alias","Glycine max","inhibitor-3","protein_coding"
"Glyma.06G183400","No alias","Glycine max","polygalacturonase 2","protein_coding"
"Glyma.06G309300","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.06G318100","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.07G034900","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.07G102800","No alias","Glycine max","Vacuolar protein sorting-associated protein 26","protein_coding"
"Glyma.07G152900","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.07G238400","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.07G255300","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.08G009100","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.08G053702","No alias","Glycine max","WUSCHEL related homeobox 1","protein_coding"
"Glyma.08G077300","No alias","Glycine max","embryo sac development arrest 14","protein_coding"
"Glyma.08G084400","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.08G102300","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.08G107400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G130400","No alias","Glycine max","ribosomal protein-related","protein_coding"
"Glyma.08G134800","No alias","Glycine max","C-CAP/cofactor C-like domain-containing protein","protein_coding"
"Glyma.08G203100","No alias","Glycine max","phytochrome-associated protein 2","protein_coding"
"Glyma.08G270701","No alias","Glycine max","Zinc finger (CCCH-type) family protein","protein_coding"
"Glyma.08G334900","No alias","Glycine max","proliferating cell nuclear antigen 2","protein_coding"
"Glyma.08G340200","No alias","Glycine max","DYNAMIN-like 1E","protein_coding"
"Glyma.09G000700","No alias","Glycine max","ribosomal protein 1","protein_coding"
"Glyma.09G047300","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.09G050500","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.09G136600","No alias","Glycine max","Oxoglutarate/iron-dependent oxygenase","protein_coding"
"Glyma.09G152000","No alias","Glycine max","Ribosomal L18p/L5e family protein","protein_coding"
"Glyma.10G035700","No alias","Glycine max","homolog of yeast CDT1 A","protein_coding"
"Glyma.10G064900","No alias","Glycine max","sequence-specific DNA binding transcription factors","protein_coding"
"Glyma.10G193200","No alias","Glycine max","heat shock protein 60","protein_coding"
"Glyma.10G213300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G225700","No alias","Glycine max","Ubiquitin carboxyl-terminal hydrolase family protein","protein_coding"
"Glyma.10G227900","No alias","Glycine max","timeless family protein","protein_coding"
"Glyma.10G232200","No alias","Glycine max","detoxifying efflux carrier 35","protein_coding"
"Glyma.10G236900","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.10G273100","No alias","Glycine max","MBOAT (membrane bound O-acyl transferase) family protein","protein_coding"
"Glyma.10G274600","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding"
"Glyma.11G019000","No alias","Glycine max","cytokinin response factor 2","protein_coding"
"Glyma.11G048366","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.11G052100","No alias","Glycine max","myb domain protein 73","protein_coding"
"Glyma.11G059500","No alias","Glycine max","methyl esterase 3","protein_coding"
"Glyma.11G113300","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.11G247900","No alias","Glycine max","DNA polymerase alpha 2","protein_coding"
"Glyma.12G039200","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.13G051500","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.13G053000","No alias","Glycine max","reversibly glycosylated polypeptide 2","protein_coding"
"Glyma.13G088300","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.13G122100","No alias","Glycine max","homolog of yeast CDT1 A","protein_coding"
"Glyma.13G156400","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.13G214200","No alias","Glycine max","BRCT domain-containing DNA repair protein","protein_coding"
"Glyma.13G230400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.13G245000","No alias","Glycine max","Transmembrane amino acid transporter family protein","protein_coding"
"Glyma.13G254900","No alias","Glycine max","mitochondrial HSO70 2","protein_coding"
"Glyma.13G276400","No alias","Glycine max","RNA-binding S4 domain-containing protein","protein_coding"
"Glyma.13G301000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.13G303000","No alias","Glycine max","Cyclin D6;1","protein_coding"
"Glyma.14G053700","No alias","Glycine max","Peroxidase superfamily protein","protein_coding"
"Glyma.14G086000","No alias","Glycine max","VIER F-box proteine 1","protein_coding"
"Glyma.14G094000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G219700","No alias","Glycine max","Chaperone protein htpG family protein","protein_coding"
"Glyma.15G059900","No alias","Glycine max","mitochondrial HSO70 2","protein_coding"
"Glyma.15G117000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G154900","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.15G218000","No alias","Glycine max","Protein of unknown function (DUF1138)","protein_coding"
"Glyma.15G271500","No alias","Glycine max","gametophytic factor 2","protein_coding"
"Glyma.16G032000","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.16G088000","No alias","Glycine max","rotamase FKBP 1","protein_coding"
"Glyma.16G214669","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.17G035000","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.17G038500","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.17G098700","No alias","Glycine max","end binding protein 1B","protein_coding"
"Glyma.17G102500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G104000","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.17G183500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G009300","No alias","Glycine max","DNA polymerase alpha 2","protein_coding"
"Glyma.18G030700","No alias","Glycine max","cellulase 2","protein_coding"
"Glyma.18G113100","No alias","Glycine max","spermidine hydroxycinnamoyl transferase","protein_coding"
"Glyma.18G119500","No alias","Glycine max","Protein of unknown function (DUF1423)","protein_coding"
"Glyma.18G121800","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding"
"Glyma.18G272800","No alias","Glycine max","Malectin/receptor-like protein kinase family protein","protein_coding"
"Glyma.19G152000","No alias","Glycine max","homolog of yeast autophagy 18 (ATG18) G","protein_coding"
"Glyma.19G158400","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.19G192500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G216100","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.20G141200","No alias","Glycine max","gibberellin 2-oxidase 8","protein_coding"
"Glyma.20G164400","No alias","Glycine max","timeless family protein","protein_coding"
"Glyma.20G239600","No alias","Glycine max","secretion-associated RAS super family 2","protein_coding"
"GRMZM2G001500","No alias","Zea mays","chloroplast heat shock protein 70-2","protein_coding"
"GRMZM2G003835","No alias","Zea mays","embryo defective 2752","protein_coding"
"GRMZM2G003875","No alias","Zea mays","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"GRMZM2G005163","No alias","Zea mays","UDP-N-acetylglucosamine (UAA) transporter family","protein_coding"
"GRMZM2G005308","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G005435","No alias","Zea mays","PPPDE putative thiol peptidase family protein","protein_coding"
"GRMZM2G010372","No alias","Zea mays","Walls Are Thin 1","protein_coding"
"GRMZM2G011858","No alias","Zea mays","root FNR 2","protein_coding"
"GRMZM2G012340","No alias","Zea mays","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"GRMZM2G014397","No alias","Zea mays","thylakoidal ascorbate peroxidase","protein_coding"
"GRMZM2G016039","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"GRMZM2G016210","No alias","Zea mays","Protein of Unknown Function (DUF239)","protein_coding"
"GRMZM2G017187","No alias","Zea mays","auxin response factor 1","protein_coding"
"GRMZM2G017643","No alias","Zea mays","Cupredoxin superfamily protein","protein_coding"
"GRMZM2G018595","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G018873","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G019434","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G021069","No alias","Zea mays","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"GRMZM2G021439","No alias","Zea mays","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"GRMZM2G023655","No alias","Zea mays","Pathogenesis-related thaumatin superfamily protein","protein_coding"
"GRMZM2G024303","No alias","Zea mays","GroES-like zinc-binding alcohol dehydrogenase family protein","protein_coding"
"GRMZM2G027437","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G028036","No alias","Zea mays","NRAMP metal ion transporter 2","protein_coding"
"GRMZM2G028216","No alias","Zea mays","Ribosomal L29 family protein","protein_coding"
"GRMZM2G029496","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G030080","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G031004","No alias","Zea mays","glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein","protein_coding"
"GRMZM2G033785","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G033829","No alias","Zea mays","PDI-like 1-4","protein_coding"
"GRMZM2G036409","No alias","Zea mays","UDP-glucosyl transferase 88A1","protein_coding"
"GRMZM2G039212","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G039610","No alias","Zea mays","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"GRMZM2G039948","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G042443","No alias","Zea mays","RNA-dependent RNA polymerase 2","protein_coding"
"GRMZM2G044055","No alias","Zea mays","formin homology 1","protein_coding"
"GRMZM2G047404","No alias","Zea mays","Glucose-6-phosphate/phosphate translocator-related","protein_coding"
"GRMZM2G047910","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding"
"GRMZM2G052908","No alias","Zea mays","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"GRMZM2G055219","No alias","Zea mays","golgin candidate 1","protein_coding"
"GRMZM2G057402","No alias","Zea mays","calcium-dependent lipid-binding family protein","protein_coding"
"GRMZM2G058402","No alias","Zea mays","F1F0-ATPase inhibitor protein, putative","protein_coding"
"GRMZM2G059740","No alias","Zea mays","S-domain-2 5","protein_coding"
"GRMZM2G060255","No alias","Zea mays","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"GRMZM2G060290","No alias","Zea mays","bZIP transcription factor family protein","protein_coding"
"GRMZM2G061321","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding"
"GRMZM2G065480","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G066775","No alias","Zea mays","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"GRMZM2G067306","No alias","Zea mays","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding"
"GRMZM2G067426","No alias","Zea mays","Protein of unknown function, DUF547","protein_coding"
"GRMZM2G071288","No alias","Zea mays","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"GRMZM2G072119","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G073123","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G073584","No alias","Zea mays","beta galactosidase 9","protein_coding"
"GRMZM2G074427","No alias","Zea mays","phytochrome-associated protein 1","protein_coding"
"GRMZM2G077437","No alias","Zea mays","Plant protein of unknown function (DUF828)","protein_coding"
"GRMZM2G078412","No alias","Zea mays","ortholog of maize chloroplast splicing factor CRS1","protein_coding"
"GRMZM2G081949","No alias","Zea mays","Remorin family protein","protein_coding"
"GRMZM2G085438","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G087479","No alias","Zea mays","Major facilitator superfamily protein","protein_coding"
"GRMZM2G088648","No alias","Zea mays","TMPIT-like protein","protein_coding"
"GRMZM2G090935","No alias","Zea mays","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"GRMZM2G091006","No alias","Zea mays","apurinic endonuclease-redox protein","protein_coding"
"GRMZM2G096153","No alias","Zea mays","glutathione S-transferase F11","protein_coding"
"GRMZM2G096269","No alias","Zea mays","glutathione S-transferase phi 8","protein_coding"
"GRMZM2G097533","No alias","Zea mays","calmodulin-domain protein kinase 7","protein_coding"
"GRMZM2G100462","No alias","Zea mays","Ribosomal protein S11 family protein","protein_coding"
"GRMZM2G101250","No alias","Zea mays","actin-related protein 9","protein_coding"
"GRMZM2G101390","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G102183","No alias","Zea mays","malate synthase","protein_coding"
"GRMZM2G103281","No alias","Zea mays","phosphorylethanolamine cytidylyltransferase 1","protein_coding"
"GRMZM2G104538","No alias","Zea mays","vitamin E pathway gene 5","protein_coding"
"GRMZM2G104551","No alias","Zea mays","myb domain protein 42","protein_coding"
"GRMZM2G105005","No alias","Zea mays","Glutathione S-transferase family protein","protein_coding"
"GRMZM2G106526","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G110932","No alias","Zea mays","biotin F","protein_coding"
"GRMZM2G114322","No alias","Zea mays","expansin-like A1","protein_coding"
"GRMZM2G117465","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G117544","No alias","Zea mays","proteasome beta subunit C1","protein_coding"
"GRMZM2G117648","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G117786","No alias","Zea mays","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding"
"GRMZM2G119759","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G119773","No alias","Zea mays","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"GRMZM2G121456","No alias","Zea mays","nuclear encoded CLP protease 5","protein_coding"
"GRMZM2G122666","No alias","Zea mays","secretion-associated RAS super family 2","protein_coding"
"GRMZM2G122848","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G123901","No alias","Zea mays","B-cell receptor-associated protein 31-like","protein_coding"
"GRMZM2G123922","No alias","Zea mays","CLPC homologue 1","protein_coding"
"GRMZM2G124802","No alias","Zea mays","NC domain-containing protein-related","protein_coding"
"GRMZM2G124815","No alias","Zea mays","HXXXD-type acyl-transferase family protein","protein_coding"
"GRMZM2G128080","No alias","Zea mays","Translin family protein","protein_coding"
"GRMZM2G128432","No alias","Zea mays","Primosome PriB/single-strand DNA-binding","protein_coding"
"GRMZM2G129879","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G131822","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G136624","No alias","Zea mays","sphere organelles protein-related","protein_coding"
"GRMZM2G139460","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G139894","No alias","Zea mays","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"GRMZM2G140545","No alias","Zea mays","general regulatory factor 2","protein_coding"
"GRMZM2G143625","No alias","Zea mays","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding"
"GRMZM2G145482","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G145827","No alias","Zea mays","DYNAMIN-like 1C","protein_coding"
"GRMZM2G146020","No alias","Zea mays","VIRE2-interacting protein 1","protein_coding"
"GRMZM2G146416","No alias","Zea mays","myosin heavy chain-related","protein_coding"
"GRMZM2G147420","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G149182","No alias","Zea mays","Glutathione S-transferase family protein","protein_coding"
"GRMZM2G149330","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G149474","No alias","Zea mays","exocyst subunit exo70 family protein G1","protein_coding"
"GRMZM2G149683","No alias","Zea mays","WRKY family transcription factor","protein_coding"
"GRMZM2G149932","No alias","Zea mays","Exostosin family protein","protein_coding"
"GRMZM2G150867","No alias","Zea mays","ubiquitin-conjugating enzyme 5","protein_coding"
"GRMZM2G151967","No alias","Zea mays","histidine acid phosphatase family protein","protein_coding"
"GRMZM2G152891","No alias","Zea mays","calmodulin 5","protein_coding"
"GRMZM2G154896","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G155580","No alias","Zea mays","peptidase M1 family protein","protein_coding"
"GRMZM2G159531","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G159660","No alias","Zea mays","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"GRMZM2G160683","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G162065","No alias","Zea mays","exocyst subunit exo70 family protein G1","protein_coding"
"GRMZM2G162295","No alias","Zea mays","tetraspanin2","protein_coding"
"GRMZM2G162725","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G169240","No alias","Zea mays","fatty acid desaturase 2","protein_coding"
"GRMZM2G169914","No alias","Zea mays","S-adenosylmethionine carrier 2","protein_coding"
"GRMZM2G171588","No alias","Zea mays","SWIB complex BAF60b domain-containing protein","protein_coding"
"GRMZM2G173023","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G175812","No alias","Zea mays","Chalcone and stilbene synthase family protein","protein_coding"
"GRMZM2G175867","No alias","Zea mays","RH39","protein_coding"
"GRMZM2G176022","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G176721","No alias","Zea mays","Major facilitator superfamily protein","protein_coding"
"GRMZM2G176748","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G179294","No alias","Zea mays","nitrate transmembrane transporters","protein_coding"
"GRMZM2G181354","No alias","Zea mays","tetraspanin2","protein_coding"
"GRMZM2G181419","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G302604","No alias","Zea mays","polyol/monosaccharide transporter 5","protein_coding"
"GRMZM2G305287","No alias","Zea mays","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"GRMZM2G309035","No alias","Zea mays","DNA glycosylase superfamily protein","protein_coding"
"GRMZM2G309747","No alias","Zea mays","SAUR-like auxin-responsive protein family","protein_coding"
"GRMZM2G322634","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G327059","No alias","Zea mays","POX (plant homeobox) family protein","protein_coding"
"GRMZM2G335126","No alias","Zea mays","Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein","protein_coding"
"GRMZM2G336875","No alias","Zea mays","Ribosomal protein S8e family protein","protein_coding"
"GRMZM2G339540","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G340139","No alias","Zea mays","autoinhibited Ca(2+)-ATPase 9","protein_coding"
"GRMZM2G355636","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G364172","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G364982","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G367857","No alias","Zea mays","DNA-directed DNA polymerases","protein_coding"
"GRMZM2G377761","No alias","Zea mays","polyribonucleotide nucleotidyltransferase, putative","protein_coding"
"GRMZM2G385287","No alias","Zea mays","Ribosomal protein L6 family","protein_coding"
"GRMZM2G395244","No alias","Zea mays","calmodulin 5","protein_coding"
"GRMZM2G401463","No alias","Zea mays","cytochrome P450, family 71, subfamily B, polypeptide 37","protein_coding"
"GRMZM2G405368","No alias","Zea mays","CONSTANS-like 2","protein_coding"
"GRMZM2G409104","No alias","Zea mays","Endomembrane protein 70 protein family","protein_coding"
"GRMZM2G410033","No alias","Zea mays","Tryptophan/tyrosine permease","protein_coding"
"GRMZM2G418635","No alias","Zea mays","Pectinacetylesterase family protein","protein_coding"
"GRMZM2G426156","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G428933","No alias","Zea mays","Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase","protein_coding"
"GRMZM2G429057","No alias","Zea mays","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"GRMZM2G431708","No alias","Zea mays","ketose-bisphosphate aldolase class-II family protein","protein_coding"
"GRMZM2G443078","No alias","Zea mays","RNA helicase, putative","protein_coding"
"GRMZM2G452026","No alias","Zea mays","eukaryotic release factor 1-3","protein_coding"
"GRMZM2G465481","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G469969","No alias","Zea mays","L-galactono-1,4-lactone dehydrogenase","protein_coding"
"GRMZM2G475263","No alias","Zea mays","auxin response factor 11","protein_coding"
"GRMZM2G479125","No alias","Zea mays","rhomboid protein-related","protein_coding"
"GRMZM2G519210","No alias","Zea mays","inhibitor-3","protein_coding"
"GRMZM5G800244","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G808610","No alias","Zea mays","Ankyrin repeat family protein","protein_coding"
"GRMZM5G821024","No alias","Zea mays","VIRE2-interacting protein 1","protein_coding"
"GRMZM5G831313","No alias","Zea mays","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"GRMZM5G832805","No alias","Zea mays","indole-3-acetate beta-D-glucosyltransferase","protein_coding"
"GRMZM5G840284","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G840612","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G858730","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G864778","No alias","Zea mays","mitochondrial HSO70 2","protein_coding"
"GRMZM5G869916","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G872068","No alias","Zea mays","glutamine synthase clone F11","protein_coding"
"GRMZM5G879193","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G891159","No alias","Zea mays","P-glycoprotein  20","protein_coding"
"GRMZM5G891450","No alias","Zea mays","Function unknown","protein_coding"
"HORVU1Hr1G029770.15","No alias","Hordeum vulgare","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"HORVU1Hr1G063700.2","No alias","Hordeum vulgare","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"HORVU1Hr1G081890.1","No alias","Hordeum vulgare","EC_2.4 glycosyltransferase","protein_coding"
"HORVU1Hr1G093890.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G046220.4","No alias","Hordeum vulgare","fatty acid transporter *(FAX) & fatty acid export protein *(FAX)","protein_coding"
"HORVU2Hr1G065940.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G073750.2","No alias","Hordeum vulgare","component *(E2F) of DREAM cell cycle regulatory complex & E2F-type transcription factor","protein_coding"
"HORVU3Hr1G017570.2","No alias","Hordeum vulgare","associated component *(ETG1) of MCM replicative DNA helicase complex","protein_coding"
"HORVU3Hr1G019670.3","No alias","Hordeum vulgare","profilin actin nucleation protein","protein_coding"
"HORVU3Hr1G020860.2","No alias","Hordeum vulgare","DPB3-type transcription factor","protein_coding"
"HORVU3Hr1G083550.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G092710.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G095780.3","No alias","Hordeum vulgare","urease accessory protein *(UreG)","protein_coding"
"HORVU4Hr1G029080.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G075040.19","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G066010.3","No alias","Hordeum vulgare","RNA editing factor *(OTP87)","protein_coding"
"HORVU6Hr1G063590.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G008760.1","No alias","Hordeum vulgare","Qbc-type SNAP25-group component of SNARE membrane fusion complex","protein_coding"
"HORVU7Hr1G059230.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00003_0510","kfl00003_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00003_0770","kfl00003_0770_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00004_0160","kfl00004_0160_v1.1","Klebsormidium nitens","(at3g54650 : 149.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0580","kfl00009_0580_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00010_0230","kfl00010_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00010_0490","kfl00010_0490_v1.1","Klebsormidium nitens","(at2g24765 : 318.0) GTPase required for Golgi targeting of GRIP domain  proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (p51823|arf2_orysa : 231.0) ADP-ribosylation factor 2 - Oryza sativa (Rice) & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0620","kfl00010_0620_v1.1","Klebsormidium nitens","(at2g06040 : 273.0) CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins in 240 species: Archae - 0; Bacteria - 125; Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"Kfl00011_0410","kfl00011_0410_v1.1","Klebsormidium nitens","(at4g23030 : 294.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: stem, male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52050.1); Has 11257 Blast hits to 11210 proteins in 2068 species: Archae - 244; Bacteria - 8067; Metazoa - 149; Fungi - 328; Plants - 1302; Viruses - 0; Other Eukaryotes - 1167 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"Kfl00015_0380","kfl00015_0380_v1.1","Klebsormidium nitens","(at1g02970 : 135.0) Protein kinase that negatively regulates the entry into mitosis.; WEE1 kinase homolog (WEE1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2); Has 100256 Blast hits to 98965 proteins in 4396 species: Archae - 165; Bacteria - 12308; Metazoa - 39873; Fungi - 10996; Plants - 18240; Viruses - 408; Other Eukaryotes - 18266 (source: NCBI BLink). & (p28583|cdpk_soybn : 107.0) Calcium-dependent protein kinase SK5 (EC 2.7.11.1) (CDPK) - Glycine max (Soybean) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"Kfl00019_0360","kfl00019_0360_v1.1","Klebsormidium nitens","(at2g36250 : 450.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; FTSZ2-1; FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 900.0) &  (original description: no original description)","protein_coding"
"Kfl00021_0130","kfl00021_0130_v1.1","Klebsormidium nitens","(at2g46210 : 121.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"Kfl00021_0480","kfl00021_0480_v1.1","Klebsormidium nitens","(at5g10720 : 210.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (o81122|etr1_maldo : 111.0) Ethylene receptor (EC 2.7.13.3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0250","kfl00022_0250_v1.1","Klebsormidium nitens","(at1g21690 : 472.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0050","kfl00024_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0070","kfl00024_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00028_0260","kfl00028_0260_v1.1","Klebsormidium nitens","(at2g44580 : 266.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0270","kfl00029_0270_v1.1","Klebsormidium nitens","(at5g44635 : 779.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 281.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0270","kfl00030_0270_v1.1","Klebsormidium nitens","(at5g66750 : 640.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 439.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0160","kfl00031_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00032_0460","kfl00032_0460_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00033_0240","kfl00033_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00033_0310","kfl00033_0310_v1.1","Klebsormidium nitens","(at2g16440 : 825.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 290.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1650.0) &  (original description: no original description)","protein_coding"
"Kfl00040_0160","kfl00040_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00040_0230","kfl00040_0230_v1.1","Klebsormidium nitens","(at3g02360 : 679.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: peroxisome; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12208 Blast hits to 12120 proteins in 2600 species: Archae - 108; Bacteria - 8004; Metazoa - 655; Fungi - 226; Plants - 316; Viruses - 4; Other Eukaryotes - 2895 (source: NCBI BLink). & (reliability: 1358.0) &  (original description: no original description)","protein_coding"
"Kfl00043_0150","kfl00043_0150_v1.1","Klebsormidium nitens","(at4g34570 : 494.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 2 (THY-2); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 13567 Blast hits to 13544 proteins in 2627 species: Archae - 73; Bacteria - 8801; Metazoa - 517; Fungi - 428; Plants - 92; Viruses - 256; Other Eukaryotes - 3400 (source: NCBI BLink). & (o81395|drts_maize : 493.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Zea mays (Maize) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0200","kfl00045_0200_v1.1","Klebsormidium nitens","(at3g05480 : 323.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0010","kfl00046_0010_v1.1","Klebsormidium nitens","(at2g29680 : 209.0) Encodes cell division control protein 6 (CDC6).; cell division control 6 (CDC6); FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: Cell division control, Cdc6 (TAIR:AT1G07270.1); Has 1385 Blast hits to 1377 proteins in 339 species: Archae - 397; Bacteria - 0; Metazoa - 348; Fungi - 289; Plants - 116; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0100","kfl00046_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00046_g2","kfl00046_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00051_0100","kfl00051_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00054_0070","kfl00054_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00056_0255","kfl00056_0255_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00056_0290","kfl00056_0290_v1.1","Klebsormidium nitens","(at4g17486 : 219.0) PPPDE putative thiol peptidase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G47310.1); Has 871 Blast hits to 871 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 234; Fungi - 89; Plants - 366; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"Kfl00064_0060","kfl00064_0060_v1.1","Klebsormidium nitens","(at1g02870 : 80.1) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"Kfl00067_0060","kfl00067_0060_v1.1","Klebsormidium nitens","(at2g01120 : 291.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0160","kfl00069_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00073_0060","kfl00073_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00073_0280","kfl00073_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00076_0120","kfl00076_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00076_0270","kfl00076_0270_v1.1","Klebsormidium nitens","(at2g32240 : 110.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"Kfl00078_0210","kfl00078_0210_v1.1","Klebsormidium nitens","(at5g17920 : 968.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (p93263|mete_mescr : 968.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Mesembryanthemum crystallinum (Common ice pl & (reliability: 1908.0) &  (original description: no original description)","protein_coding"
"Kfl00078_0250","kfl00078_0250_v1.1","Klebsormidium nitens","(at4g37210 : 149.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00092_0330","kfl00092_0330_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00093_0020","kfl00093_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00094_0110","kfl00094_0110_v1.1","Klebsormidium nitens","(at1g58370 : 92.8) Encodes a protein with xylanase activity.; RXF12; FUNCTIONS IN: endo-1,4-beta-xylanase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein (TAIR:AT1G10050.1); Has 2572 Blast hits to 2336 proteins in 449 species: Archae - 10; Bacteria - 1384; Metazoa - 31; Fungi - 355; Plants - 353; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"Kfl00094_0140","kfl00094_0140_v1.1","Klebsormidium nitens","(at2g21470 : 602.0) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation.  Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 2 (SAE2); CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: E1 C-terminal related 1 (TAIR:AT5G19180.1). & (p31251|ube12_wheat : 117.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"Kfl00109_0130","kfl00109_0130_v1.1","Klebsormidium nitens","(at4g18100 : 201.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00110_0160","kfl00110_0160_v1.1","Klebsormidium nitens","(q43814|otc_pea : 464.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 438.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"Kfl00113_0160","kfl00113_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00123_0030","kfl00123_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00125_0130","kfl00125_0130_v1.1","Klebsormidium nitens","(at1g63660 : 770.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1540.0) &  (original description: no original description)","protein_coding"
"Kfl00128_0270","kfl00128_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00130_0130","kfl00130_0130_v1.1","Klebsormidium nitens","(at5g27740 : 530.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0230","kfl00130_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00131_0070","kfl00131_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00139_0070","kfl00139_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00152_0050","kfl00152_0050_v1.1","Klebsormidium nitens","(at5g03420 : 103.0) 5'-AMP-activated protein kinase-related; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"Kfl00164_0030","kfl00164_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00165_0140","kfl00165_0140_v1.1","Klebsormidium nitens","(at4g29910 : 184.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00168_0120","kfl00168_0120_v1.1","Klebsormidium nitens","(at3g48000 : 408.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (o24174|badh_orysa : 327.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 816.0) &  (original description: no original description)","protein_coding"
"Kfl00170_0210","kfl00170_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00175_0230","kfl00175_0230_v1.1","Klebsormidium nitens","(p21727|tpt_pea : 338.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (at5g46110 : 333.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO  ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"Kfl00177_0290","kfl00177_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00177_0300","kfl00177_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00179_0010","kfl00179_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00180_0090","kfl00180_0090_v1.1","Klebsormidium nitens","(at5g25760 : 244.0) mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin4 (PEX4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10357 Blast hits to 10353 proteins in 397 species: Archae - 0; Bacteria - 2; Metazoa - 4640; Fungi - 2157; Plants - 1900; Viruses - 24; Other Eukaryotes - 1634 (source: NCBI BLink). & (p35130|ubc2_medsa : 112.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"Kfl00183_0100","kfl00183_0100_v1.1","Klebsormidium nitens","(at1g29220 : 135.0) transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"Kfl00184_0010","kfl00184_0010_v1.1","Klebsormidium nitens","(at2g07690 : 812.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 306.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"Kfl00201_0040","kfl00201_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00214_0170","kfl00214_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00223_0080","kfl00223_0080_v1.1","Klebsormidium nitens","(at5g07590 : 518.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 1036.0) &  (original description: no original description)","protein_coding"
"Kfl00230_0030","kfl00230_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00230_0060","kfl00230_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00240_0070","kfl00240_0070_v1.1","Klebsormidium nitens","(at5g55280 : 364.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00240_0090","kfl00240_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00263_0136","kfl00263_0136_v1.1","Klebsormidium nitens","(at2g38905 : 86.3) Low temperature and salt responsive protein family; INVOLVED IN: response to cold, hyperosmotic salinity response; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT3G05880.1); Has 1410 Blast hits to 1410 proteins in 468 species: Archae - 0; Bacteria - 654; Metazoa - 39; Fungi - 295; Plants - 382; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (q6at93|lti6b_orysa : 85.1) Hydrophobic protein LTI6B (Low temperature-induced protein 6B) - Oryza sativa (Rice) & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"Kfl00263_0180","kfl00263_0180_v1.1","Klebsormidium nitens","(at1g78650 : 128.0) Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication.; POLD3; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA strand elongation involved in DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase subunit Cdc27 (InterPro:IPR019038); Has 2595 Blast hits to 2034 proteins in 330 species: Archae - 0; Bacteria - 228; Metazoa - 1072; Fungi - 424; Plants - 126; Viruses - 27; Other Eukaryotes - 718 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00265_0050","kfl00265_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00302_0130","kfl00302_0130_v1.1","Klebsormidium nitens","(at3g12280 : 240.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte.  Also required for correct differentiation of male gametophytic cell types.  Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Kfl00303_0040","kfl00303_0040_v1.1","Klebsormidium nitens","(at2g17820 : 195.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"Kfl00304_0040","kfl00304_0040_v1.1","Klebsormidium nitens","(at5g23290 : 118.0) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"Kfl00306_0030","kfl00306_0030_v1.1","Klebsormidium nitens","(at2g17820 : 218.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 97.1) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"Kfl00307_0090","kfl00307_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00322_0110","kfl00322_0110_v1.1","Klebsormidium nitens","(at4g01160 : 82.4) BTB/POZ/Kelch-associated protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: POZ/BTB containin G-protein 1 (TAIR:AT3G61600.2); Has 3481 Blast hits to 3463 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 3173; Fungi - 4; Plants - 136; Viruses - 49; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00323_0150","kfl00323_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00331_0020","kfl00331_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00364_0060","kfl00364_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00372_0100","kfl00372_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00380_0070","kfl00380_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00388_0030","kfl00388_0030_v1.1","Klebsormidium nitens","(at1g26170 : 702.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"Kfl00397_0020","kfl00397_0020_v1.1","Klebsormidium nitens","(at3g49660 : 423.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p25387|gblp_chlre : 138.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"Kfl00420_0050","kfl00420_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00422_0010","kfl00422_0010_v1.1","Klebsormidium nitens","(at1g44900 : 989.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 308.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1978.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0040","kfl00425_0040_v1.1","Klebsormidium nitens","(at1g80560 : 526.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 521.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"Kfl00431_0030","kfl00431_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00479_0080","kfl00479_0080_v1.1","Klebsormidium nitens","(at1g12000 : 703.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (q41141|pfpb_ricco : 697.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (reliability: 1406.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0090","kfl00481_0090_v1.1","Klebsormidium nitens","(at4g02060 : 837.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 242.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1674.0) &  (original description: no original description)","protein_coding"
"Kfl00487_0010","kfl00487_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00487_0070","kfl00487_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00499_0040","kfl00499_0040_v1.1","Klebsormidium nitens","(at3g58690 : 229.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54820.1); Has 119556 Blast hits to 118228 proteins in 3954 species: Archae - 119; Bacteria - 14059; Metazoa - 43160; Fungi - 10190; Plants - 33928; Viruses - 396; Other Eukaryotes - 17704 (source: NCBI BLink). & (o24585|cri4_maize : 196.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"Kfl00499_0060","kfl00499_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00502_0020","kfl00502_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00523_0070","kfl00523_0070_v1.1","Klebsormidium nitens","(at5g58230 : 676.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00546_0050","kfl00546_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00567_0050","kfl00567_0050_v1.1","Klebsormidium nitens","(at2g14050 : 705.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 258.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1410.0) &  (original description: no original description)","protein_coding"
"Kfl00572_0080","kfl00572_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00579_0050","kfl00579_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00579_0100","kfl00579_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00609_0010","kfl00609_0010_v1.1","Klebsormidium nitens","(p49310|grp1_sinal : 126.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 124.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript.  Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway.   There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00619_0020","kfl00619_0020_v1.1","Klebsormidium nitens","(at1g27990 : 179.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"Kfl00630_0070","kfl00630_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00635_0040","kfl00635_0040_v1.1","Klebsormidium nitens","(at4g18460 : 204.0) D-Tyr-tRNA(Tyr) deacylase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: D-amino acid catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-tyrosyl-tRNA(Tyr) deacylase (InterPro:IPR003732); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"Kfl00635_0050","kfl00635_0050_v1.1","Klebsormidium nitens","(at1g63680 : 628.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis.  Localized to plastids.  AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"Kfl00651_0010","kfl00651_0010_v1.1","Klebsormidium nitens","(at4g34200 : 709.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (p13443|dhgy_cucsa : 95.5) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1418.0) &  (original description: no original description)","protein_coding"
"Kfl00662_0040","kfl00662_0040_v1.1","Klebsormidium nitens","(at1g16520 : 201.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00685_0050","kfl00685_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00733_0010","kfl00733_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00771_0050","kfl00771_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00788_0010","kfl00788_0010_v1.1","Klebsormidium nitens","(at5g46280 : 794.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 643.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1588.0) &  (original description: no original description)","protein_coding"
"Kfl00812_0040","kfl00812_0040_v1.1","Klebsormidium nitens","(at5g25757 : 660.0) RNA polymerase I-associated factor PAF67; CONTAINS InterPro DOMAIN/s: RNA polymerase I-associated factor PAF67 (InterPro:IPR019382); BEST Arabidopsis thaliana protein match is: RNA polymerase I-associated factor PAF67 (TAIR:AT5G25754.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1320.0) &  (original description: no original description)","protein_coding"
"Kfl00840_0070","kfl00840_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00912_0040","kfl00912_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01020_0010","kfl01020_0010_v1.1","Klebsormidium nitens","(at1g75460 : 265.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl01106_g1","kfl01106_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01164_0010","kfl01164_0010_v1.1","Klebsormidium nitens","(at1g07700 : 163.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G19730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"Kfl01204_0020","kfl01204_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01292_0010","kfl01292_0010_v1.1","Klebsormidium nitens","(at2g40550 : 368.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 736.0) &  (original description: no original description)","protein_coding"
"Kfl01328_0010","kfl01328_0010_v1.1","Klebsormidium nitens","(at2g21280 : 368.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (reliability: 736.0) &  (original description: no original description)","protein_coding"
"Kfl01436_0010","kfl01436_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g02310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g02860","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g02960","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g05289","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g05440","No alias","Oryza sativa","XH domain containing protein, expressed","protein_coding"
"LOC_Os01g05460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g05744","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g10610","No alias","Oryza sativa","BES1/BZR1 homolog protein, putative, expressed","protein_coding"
"LOC_Os01g10760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g11070","No alias","Oryza sativa","Alg9-like mannosyltransferase protein, putative, expressed","protein_coding"
"LOC_Os01g13090","No alias","Oryza sativa","nucleic acid binding protein, putative, expressed","protein_coding"
"LOC_Os01g13210","No alias","Oryza sativa","salt stress root protein RS1, putative, expressed","protein_coding"
"LOC_Os01g21560","No alias","Oryza sativa","esterase/lipase/thioesterase family protein, putative, expressed","protein_coding"
"LOC_Os01g22640","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os01g23650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g40000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g40570","No alias","Oryza sativa","outer mitochondrial membrane porin, putative, expressed","protein_coding"
"LOC_Os01g41550","No alias","Oryza sativa","aspartic proteinase, putative, expressed","protein_coding"
"LOC_Os01g43360","No alias","Oryza sativa","myosin-Ie, putative, expressed","protein_coding"
"LOC_Os01g48950","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g51140","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os01g51200","No alias","Oryza sativa","CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed","protein_coding"
"LOC_Os01g57020","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g60590","No alias","Oryza sativa","transposon protein, putative, Pong sub-class, expressed","protein_coding"
"LOC_Os01g64210","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g67210","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g67890","No alias","Oryza sativa","OsMADS96 - MADS-box family gene with M-beta type-box, expressed","protein_coding"
"LOC_Os01g69110","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g70800","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os01g73650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g74110","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os02g01940","No alias","Oryza sativa","transcription factor jumonji, putative, expressed","protein_coding"
"LOC_Os02g02930","No alias","Oryza sativa","terpene synthase, putative, expressed","protein_coding"
"LOC_Os02g05510","No alias","Oryza sativa","GATA transcription factor 25, putative, expressed","protein_coding"
"LOC_Os02g05840","No alias","Oryza sativa","VIL2 protein, putative, expressed","protein_coding"
"LOC_Os02g10730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g11780","No alias","Oryza sativa","transcription factor S-II, central domain containing protein, expressed","protein_coding"
"LOC_Os02g12750","No alias","Oryza sativa","tetraspanin family protein, putative, expressed","protein_coding"
"LOC_Os02g15250","No alias","Oryza sativa","late embryogenesis abundant domain-containing protein, putative, expressed","protein_coding"
"LOC_Os02g16540","No alias","Oryza sativa","WRKY39, expressed","protein_coding"
"LOC_Os02g17560","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os02g19150","No alias","Oryza sativa","AAA family ATPase, putative, expressed","protein_coding"
"LOC_Os02g19440","No alias","Oryza sativa","sirohydrochlorin ferrochelatase, putative, expressed","protein_coding"
"LOC_Os02g35820","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g39490","No alias","Oryza sativa","carbonyl reductase 3, putative, expressed","protein_coding"
"LOC_Os02g44860","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os02g45570","No alias","Oryza sativa","growth regulating factor protein, putative, expressed","protein_coding"
"LOC_Os02g45660","No alias","Oryza sativa","2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os02g47100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g48220","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g49640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g54180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g57600","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g57640","No alias","Oryza sativa","KH domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g08250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g09040","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os03g10224","No alias","Oryza sativa","MT-A70 domain containing protein, expressed","protein_coding"
"LOC_Os03g13000","No alias","Oryza sativa","GTP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g13340","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g14570","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g15410","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g15420","No alias","Oryza sativa","dynamin family protein, putative, expressed","protein_coding"
"LOC_Os03g22960","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g23010","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g24900","No alias","Oryza sativa","DHHC zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os03g27200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g43980","No alias","Oryza sativa","AAT1, putative, expressed","protein_coding"
"LOC_Os03g46690","No alias","Oryza sativa","OsFBX105 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os03g51470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g51680","No alias","Oryza sativa","fanconi anemia L, putative, expressed","protein_coding"
"LOC_Os03g52690","No alias","Oryza sativa","CBS domain containing membrane protein, putative, expressed","protein_coding"
"LOC_Os03g53190","No alias","Oryza sativa","Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g53690","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed","protein_coding"
"LOC_Os03g61040","No alias","Oryza sativa","GIL1, putative, expressed","protein_coding"
"LOC_Os03g63170","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os03g64260","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os04g03884","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os04g09990","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os04g10460","No alias","Oryza sativa","amidase, putative, expressed","protein_coding"
"LOC_Os04g10780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g19750","No alias","Oryza sativa","OsFBL11 - F-box domain and LRR containing protein, expressed","protein_coding"
"LOC_Os04g22860","No alias","Oryza sativa","protein phosphatase 1 regulatory subunit 11, putative, expressed","protein_coding"
"LOC_Os04g25720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g29210","No alias","Oryza sativa","FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed","protein_coding"
"LOC_Os04g33040","No alias","Oryza sativa","alpha-amylase precursor, putative, expressed","protein_coding"
"LOC_Os04g33980","No alias","Oryza sativa","transposon protein, putative, Mutator sub-class, expressed","protein_coding"
"LOC_Os04g34080","No alias","Oryza sativa","WD-40 repeat family protein, putative, expressed","protein_coding"
"LOC_Os04g35750","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g36030","No alias","Oryza sativa","AIG1, putative, expressed","protein_coding"
"LOC_Os04g36810","No alias","Oryza sativa","LSM domain containing protein, expressed","protein_coding"
"LOC_Os04g42700","No alias","Oryza sativa","receptor-like protein kinase precursor, putative, expressed","protein_coding"
"LOC_Os04g44880","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g45330","No alias","Oryza sativa","YABBY domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g46480","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g50020","No alias","Oryza sativa","heavy-metal-associated domain-containing protein, putative, expressed","protein_coding"
"LOC_Os04g54370","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g55520","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os04g57370","No alias","Oryza sativa","acyl-protein thioesterase, putative, expressed","protein_coding"
"LOC_Os04g57630","No alias","Oryza sativa","phytosulfokine receptor precursor, putative, expressed","protein_coding"
"LOC_Os04g58504","No alias","Oryza sativa","choline transporter-related, putative, expressed","protein_coding"
"LOC_Os05g03200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g13520","No alias","Oryza sativa","white-brown complex homolog protein 12, putative, expressed","protein_coding"
"LOC_Os05g15120","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g15930","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g18774","No alias","Oryza sativa","protein phosphatase 1 regulatory subunit 11, putative, expressed","protein_coding"
"LOC_Os05g19130","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g30030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g33600","No alias","Oryza sativa","cytochrome P450 72A1, putative, expressed","protein_coding"
"LOC_Os05g34710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g39350","No alias","Oryza sativa","PMR5, putative, expressed","protein_coding"
"LOC_Os05g43040","No alias","Oryza sativa","tetratricopeptide repeat domain containing protein, expressed","protein_coding"
"LOC_Os05g47970","No alias","Oryza sativa","microtubule associated protein, putative, expressed","protein_coding"
"LOC_Os05g48940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g48970","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os05g49670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g50460","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os05g51430","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g51540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g01280","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os06g02770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g04540","No alias","Oryza sativa","DNA binding protein, putative, expressed","protein_coding"
"LOC_Os06g08510","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g11620","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os06g12800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g17460","No alias","Oryza sativa","fasciclin domain containing protein, expressed","protein_coding"
"LOC_Os06g23970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g24540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g30390","No alias","Oryza sativa","oxidoreductase/ transition metal ion binding protein, putative, expressed","protein_coding"
"LOC_Os06g34730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g38710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g39912","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g41790","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os06g43660","No alias","Oryza sativa","inorganic H+ pyrophosphatase, putative, expressed","protein_coding"
"LOC_Os06g44610","No alias","Oryza sativa","membrane associated DUF588 domain containing protein, putative, expressed","protein_coding"
"LOC_Os06g46590","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g47550","No alias","Oryza sativa","cadmium/zinc-transporting ATPase, putative, expressed","protein_coding"
"LOC_Os07g02290","No alias","Oryza sativa","OsFBX208 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os07g05420","No alias","Oryza sativa","anthocyanidin 3-O-glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os07g08180","No alias","Oryza sativa","PPR repeat containing protein, expressed","protein_coding"
"LOC_Os07g10570","No alias","Oryza sativa","PROLM25 - Prolamin precursor, expressed","protein_coding"
"LOC_Os07g18960","No alias","Oryza sativa","GCRP14 - Glycine and cysteine rich family protein precursor, putative, expressed","protein_coding"
"LOC_Os07g20150","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g23470","No alias","Oryza sativa","thaumatin, putative, expressed","protein_coding"
"LOC_Os07g23640","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding"
"LOC_Os07g30200","No alias","Oryza sativa","tRNA synthetases class II domain containing protein, expressed","protein_coding"
"LOC_Os07g32060","No alias","Oryza sativa","UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed","protein_coding"
"LOC_Os07g33110","No alias","Oryza sativa","CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os07g37290","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g38530","No alias","Oryza sativa","STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed","protein_coding"
"LOC_Os07g43390","No alias","Oryza sativa","4-alpha-glucanotransferase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os08g01680","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os08g08690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g20420","No alias","Oryza sativa","MGD2, putative, expressed","protein_coding"
"LOC_Os08g21670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g25820","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os08g27190","No alias","Oryza sativa","OsFBX288 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os08g28200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g34480","No alias","Oryza sativa","splicing factor 3B subunit 5, putative, expressed","protein_coding"
"LOC_Os08g34870","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g37040","No alias","Oryza sativa","gibberellin receptor GID1L2, putative, expressed","protein_coding"
"LOC_Os08g40470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g40900","No alias","Oryza sativa","auxin response factor, putative, expressed","protein_coding"
"LOC_Os08g43160","No alias","Oryza sativa","TCP family transcription factor, putative, expressed","protein_coding"
"LOC_Os08g44230","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os08g44330","No alias","Oryza sativa","peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed","protein_coding"
"LOC_Os08g45200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g02270","No alias","Oryza sativa","cyclase family protein, putative, expressed","protein_coding"
"LOC_Os09g07480","No alias","Oryza sativa","membrane associated DUF588 domain containing protein, putative, expressed","protein_coding"
"LOC_Os09g10840","No alias","Oryza sativa","transcription factor, putative, expressed","protein_coding"
"LOC_Os09g11440","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g17344","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g18010","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g19550","No alias","Oryza sativa","SNARE domain containing protein, putative, expressed","protein_coding"
"LOC_Os09g20350","No alias","Oryza sativa","ethylene-responsive transcription factor, putative, expressed","protein_coding"
"LOC_Os09g21890","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os09g23334","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g25090","No alias","Oryza sativa","CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os09g26820","No alias","Oryza sativa","exo70 exocyst complex subunit, putative, expressed","protein_coding"
"LOC_Os09g28760","No alias","Oryza sativa","CXE carboxylesterase, putative, expressed","protein_coding"
"LOC_Os09g30140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g31190","No alias","Oryza sativa","slowmo homolog, putative, expressed","protein_coding"
"LOC_Os09g32470","No alias","Oryza sativa","membrane protein, putative, expressed","protein_coding"
"LOC_Os09g32800","No alias","Oryza sativa","peptidase, T1 family, putative, expressed","protein_coding"
"LOC_Os09g35970","No alias","Oryza sativa","6-phosphogluconolactonase, putative, expressed","protein_coding"
"LOC_Os09g38060","No alias","Oryza sativa","nicotinate-nucleotide pyrophosphorylase, putative, expressed","protein_coding"
"LOC_Os10g01720","No alias","Oryza sativa","transferase family protein, putative, expressed","protein_coding"
"LOC_Os10g05220","No alias","Oryza sativa","queuine tRNA-ribosyltransferase, putative, expressed","protein_coding"
"LOC_Os10g10980","No alias","Oryza sativa","OsFBX379 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g25990","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os10g37830","No alias","Oryza sativa","OsFBX391 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g37880","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os10g41650","No alias","Oryza sativa","OsFBX392 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g42540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g03160","No alias","Oryza sativa","glycosyl transferase, family 8, putative, expressed","protein_coding"
"LOC_Os11g05530","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g05660","No alias","Oryza sativa","OsFBX396 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os11g05880","No alias","Oryza sativa","exo70 exocyst complex subunit, putative, expressed","protein_coding"
"LOC_Os11g07500","No alias","Oryza sativa","DSHCT domain containing protein, expressed","protein_coding"
"LOC_Os11g11790","No alias","Oryza sativa","NBS-LRR type disease resistance protein, putative, expressed","protein_coding"
"LOC_Os11g17330","No alias","Oryza sativa","stripe rust resistance protein Yr10, putative, expressed","protein_coding"
"LOC_Os11g25760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g29380","No alias","Oryza sativa","MCM2 - Putative minichromosome maintenance MCM complex subunit 2, expressed","protein_coding"
"LOC_Os11g29520","No alias","Oryza sativa","NBS-LRR disease resistance protein, putative, expressed","protein_coding"
"LOC_Os11g31420","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g32110","No alias","Oryza sativa","auxin response factor, putative, expressed","protein_coding"
"LOC_Os11g32410","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g32650","No alias","Oryza sativa","chalcone synthase, putative, expressed","protein_coding"
"LOC_Os11g34350","No alias","Oryza sativa","ATP-binding cassette sub-family E member 1, putative, expressed","protein_coding"
"LOC_Os11g44570","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g45220","No alias","Oryza sativa","IWS1 homolog A, putative, expressed","protein_coding"
"LOC_Os12g01310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g02390","No alias","Oryza sativa","vacuolar-sorting receptor precursor, putative, expressed","protein_coding"
"LOC_Os12g04424","No alias","Oryza sativa","strictosidine synthase, putative, expressed","protein_coding"
"LOC_Os12g04750","No alias","Oryza sativa","OsDegp14 - Putative Deg protease homologue, expressed","protein_coding"
"LOC_Os12g27510","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g27680","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding"
"LOC_Os12g29040","No alias","Oryza sativa","LTPL111 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os12g34014","No alias","Oryza sativa","NADH-ubiquinone oxidoreductase chain 6, putative, expressed","protein_coding"
"LOC_Os12g36310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g39770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g41950","No alias","Oryza sativa","auxin response factor, putative, expressed","protein_coding"
"LOC_Os12g43490","No alias","Oryza sativa","thaumatin, putative, expressed","protein_coding"
"MA_10174633g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10426126g0010","No alias","Picea abies","(at5g58220 : 234.0) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1  (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"MA_10426976g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10427207g0010","No alias","Picea abies",""(at1g56170 : 205.0) Encodes a protein with similarity to a subunit of  the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues; ""nuclear factor Y, subunit C2"" (NF-YC2); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 1485 Blast hits to 1485 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 338; Plants - 429; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)"","protein_coding"
"MA_110784g0010","No alias","Picea abies","(at1g18580 : 657.0) Encodes a protein with  putative galacturonosyltransferase activity.; galacturonosyltransferase 11 (GAUT11); FUNCTIONS IN: polygalacturonate 4-alpha-galacturonosyltransferase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 10 (TAIR:AT2G20810.1); Has 1461 Blast hits to 1453 proteins in 263 species: Archae - 0; Bacteria - 484; Metazoa - 143; Fungi - 0; Plants - 819; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1314.0) &  (original description: no original description)","protein_coding"
"MA_134429g0010","No alias","Picea abies","(at2g27920 : 135.0) serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"MA_169607g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_18206g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_200144g0010","No alias","Picea abies","(at1g70520 : 410.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 193.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"MA_220085g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_22423g0010","No alias","Picea abies","(at5g13780 : 277.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G03150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"MA_35091g0010","No alias","Picea abies","(at4g28890 : 162.0) RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"MA_42003g0010","No alias","Picea abies","(at1g11050 : 496.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like kinase in in flowers 3 (TAIR:AT2G48010.1); Has 115297 Blast hits to 114175 proteins in 4324 species: Archae - 104; Bacteria - 13350; Metazoa - 42303; Fungi - 9816; Plants - 32853; Viruses - 335; Other Eukaryotes - 16536 (source: NCBI BLink). & (q8l4h4|nork_medtr : 207.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 992.0) &  (original description: no original description)","protein_coding"
"MA_430722g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_467756g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_482250g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_63700g0010","No alias","Picea abies","(at3g19950 : 187.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G55530.1); Has 11106 Blast hits to 11075 proteins in 297 species: Archae - 0; Bacteria - 6; Metazoa - 2940; Fungi - 1152; Plants - 5266; Viruses - 73; Other Eukaryotes - 1669 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"MA_699589g0010","No alias","Picea abies","(at2g35795 : 172.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G09700.1); Has 912 Blast hits to 912 proteins in 301 species: Archae - 0; Bacteria - 183; Metazoa - 207; Fungi - 194; Plants - 95; Viruses - 5; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"MA_79158g0010","No alias","Picea abies","(at5g24460 : 174.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"MA_8066243g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_824489g0010","No alias","Picea abies","(at3g09840 : 252.0) Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.; cell division cycle 48 (CDC48); FUNCTIONS IN: ATPase activity, identical protein binding; INVOLVED IN: response to cadmium ion, pollen germination, pollen tube growth, cell division, phosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66378 Blast hits to 39099 proteins in 3298 species: Archae - 1713; Bacteria - 29252; Metazoa - 8676; Fungi - 6302; Plants - 5800; Viruses - 77; Other Eukaryotes - 14558 (source: NCBI BLink). & (p54774|cdc48_soybn : 248.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"MA_858691g0010","No alias","Picea abies","(at1g02040 : 88.2) C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 5502 Blast hits to 3522 proteins in 286 species: Archae - 2; Bacteria - 120; Metazoa - 2284; Fungi - 460; Plants - 1034; Viruses - 242; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"MA_91294g0010","No alias","Picea abies","(at4g33420 : 141.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p11965|perx_tobac : 105.0) Lignin-forming anionic peroxidase precursor (EC 1.11.1.7) (TOPA) - Nicotiana tabacum (Common tobacco) & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"MA_9683140g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"Mp1g00470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g02290.1","No alias","Marchantia polymorpha","Peptide methionine sulfoxide reductase OS=Lactuca sativa (sp|q9sec2|msra_lacsa : 284.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.8 oxidoreductase acting on sulfur group of donor(50.1.8 : 234.1)","protein_coding"
"Mp1g03500.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g05160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g05690.1","No alias","Marchantia polymorpha","TAC17 cofactor of plastid-encoded RNA polymerase","protein_coding"
"Mp1g06300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g08590.1","No alias","Marchantia polymorpha","component EH of TPLATE AP-2 co-adaptor complex","protein_coding"
"Mp1g09360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g09670.1","No alias","Marchantia polymorpha","threonine-tRNA ligase","protein_coding"
"Mp1g12450.1","No alias","Marchantia polymorpha","component beta type-6 of 26S proteasome","protein_coding"
"Mp1g14070.1","No alias","Marchantia polymorpha","motor protein (Kinesin-7)","protein_coding"
"Mp1g14080.1","No alias","Marchantia polymorpha","SIM-type cyclin-dependent kinase inhibitor","protein_coding"
"Mp1g15950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g16290.1","No alias","Marchantia polymorpha","4-diphosphocytidyl-2-C-methyl-D-erythritol kinase","protein_coding"
"Mp1g16850.1","No alias","Marchantia polymorpha","component LHCb4 of LHC-II complex","protein_coding"
"Mp1g16970.1","No alias","Marchantia polymorpha","Protein GID8 homolog OS=Arabidopsis thaliana (sp|q84wk5|gid8_arath : 92.4)","protein_coding"
"Mp1g17650.1","No alias","Marchantia polymorpha","component MCM3 of MCM replicative DNA helicase complex","protein_coding"
"Mp1g17910.1","No alias","Marchantia polymorpha","proline dehydrogenase","protein_coding"
"Mp1g19210.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding"
"Mp1g19890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g20500.1","No alias","Marchantia polymorpha","3-isopropylmalate dehydrogenase. methylthioalkylmalate dehydrogenase","protein_coding"
"Mp1g21340.1","No alias","Marchantia polymorpha","protoporphyrinogen IX oxidase","protein_coding"
"Mp1g24020.1","No alias","Marchantia polymorpha","component PsaE of PS-I complex","protein_coding"
"Mp1g25870.1","No alias","Marchantia polymorpha","solute transporter (MTCC)","protein_coding"
"Mp1g26180.1","No alias","Marchantia polymorpha","Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana (sp|q9cap8|lacs9_arath : 900.0) & Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond(50.6.2 : 421.8)","protein_coding"
"Mp1g26820.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g27830.1","No alias","Marchantia polymorpha","Probable GTP diphosphokinase CRSH, chloroplastic OS=Arabidopsis thaliana (sp|q84r11|crsh_arath : 451.0)","protein_coding"
"Mp2g01860.1","No alias","Marchantia polymorpha","nicotinamidase","protein_coding"
"Mp2g02200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g02600.1","No alias","Marchantia polymorpha","component MCM7 of MCM replicative DNA helicase complex","protein_coding"
"Mp2g03220.1","No alias","Marchantia polymorpha","Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana (sp|q9lu21|pnsb3_arath : 99.0)","protein_coding"
"Mp2g06190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g07170.1","No alias","Marchantia polymorpha","transcription factor (bZIP)","protein_coding"
"Mp2g08520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g08590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g11860.1","No alias","Marchantia polymorpha","RING-H2-class E3 ligase","protein_coding"
"Mp2g11980.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g12360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g15420.1","No alias","Marchantia polymorpha","component LHCa1 of LHC-I complex","protein_coding"
"Mp2g17860.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 211.8) & Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana (sp|q9suc0|3hidh_arath : 117.0)","protein_coding"
"Mp2g18290.1","No alias","Marchantia polymorpha","component ORC5 of origin recognition complex","protein_coding"
"Mp2g20370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g21100.1","No alias","Marchantia polymorpha","phytoene synthase (PSY)","protein_coding"
"Mp2g21290.1","No alias","Marchantia polymorpha","eIF2-GTP hydrolysis activating factor (eIF5)","protein_coding"
"Mp3g00100.1","No alias","Marchantia polymorpha","triosephosphate isomerase. triosephosphate isomerase","protein_coding"
"Mp3g00130.1","No alias","Marchantia polymorpha","component MCM2 of MCM replicative DNA helicase complex","protein_coding"
"Mp3g00810.1","No alias","Marchantia polymorpha","plastidial glucanotransferase","protein_coding"
"Mp3g02380.1","No alias","Marchantia polymorpha","component MCM4 of MCM replicative DNA helicase complex","protein_coding"
"Mp3g06110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g07840.1","No alias","Marchantia polymorpha","component LHCa4 of LHC-I complex","protein_coding"
"Mp3g10200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g12180.1","No alias","Marchantia polymorpha","TSPO autophagosome autophagic adapter protein","protein_coding"
"Mp3g12460.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g12470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g15830.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g16900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g17240.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g18390.1","No alias","Marchantia polymorpha","transport protein (NiCoT)","protein_coding"
"Mp3g18960.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g21780.1","No alias","Marchantia polymorpha","Protein OPAQUE10 OS=Zea mays (sp|p0dkl2|op10_maize : 112.0)","protein_coding"
"Mp3g23270.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g00930.1","No alias","Marchantia polymorpha","component LHCa3 of LHC-I complex","protein_coding"
"Mp4g02810.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g03060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g06050.1","No alias","Marchantia polymorpha","small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer","protein_coding"
"Mp4g06770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g06880.1","No alias","Marchantia polymorpha","component PsaK of PS-I complex","protein_coding"
"Mp4g07730.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g08380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g08900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g10900.1","No alias","Marchantia polymorpha","component LHCb5 of LHC-II complex","protein_coding"
"Mp4g11570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g14080.1","No alias","Marchantia polymorpha","WEE1 cell cycle interphase regulator kinase. protein kinase (WEE)","protein_coding"
"Mp4g14930.1","No alias","Marchantia polymorpha","component MCM6 of MCM replicative DNA helicase complex","protein_coding"
"Mp4g20930.1","No alias","Marchantia polymorpha","HHL1 protein involved in PS-II assembly","protein_coding"
"Mp4g23010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g24020.1","No alias","Marchantia polymorpha","omega-3/omega-6 fatty acid desaturase","protein_coding"
"Mp5g01990.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g03590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g03610.1","No alias","Marchantia polymorpha","potassium cation transporter (HAK/KUP/KT)","protein_coding"
"Mp5g04200.1","No alias","Marchantia polymorpha","component PsaD of PS-I complex","protein_coding"
"Mp5g05910.1","No alias","Marchantia polymorpha","tocopherol cyclase (VTE1/TC)","protein_coding"
"Mp5g07440.1","No alias","Marchantia polymorpha","lipoamide acyltransferase component E2 of branched-chain alpha-keto acid dehydrogenase complex","protein_coding"
"Mp5g08580.1","No alias","Marchantia polymorpha","sphingolipid fatty acid 2-hydroxylase","protein_coding"
"Mp5g08590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g10090.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g10440.1","No alias","Marchantia polymorpha","Putative metallophosphoesterase At3g03305 OS=Arabidopsis thaliana (sp|q0wvz1|y3330_arath : 404.0)","protein_coding"
"Mp5g11890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g12790.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g13220.1","No alias","Marchantia polymorpha","subfamily ABCC transporter","protein_coding"
"Mp5g13740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g15190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g15210.1","No alias","Marchantia polymorpha","Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana (sp|q9asx5|y5520_arath : 112.0)","protein_coding"
"Mp5g19910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g20200.1","No alias","Marchantia polymorpha","scaffold protein NFU of plastidial SUF system transfer phase","protein_coding"
"Mp5g24300.1","No alias","Marchantia polymorpha","component MED17 of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Mp6g02620.1","No alias","Marchantia polymorpha","transcription factor (NAC)","protein_coding"
"Mp6g04050.1","No alias","Marchantia polymorpha","P2B-type calcium cation-transporting ATPase (ACA)","protein_coding"
"Mp6g04720.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05910.1","No alias","Marchantia polymorpha","subfamily ABCG transporter","protein_coding"
"Mp6g07390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g09650.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g10010.1","No alias","Marchantia polymorpha","bifunctional homoserine dehydrogenase and aspartate kinase","protein_coding"
"Mp6g10540.1","No alias","Marchantia polymorpha","Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase(50.5.4 : 307.2) & Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic OS=Arabidopsis thaliana (sp|o49290|cppm_arath : 166.0)","protein_coding"
"Mp6g12080.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g12090.1","No alias","Marchantia polymorpha","channel component MCU of MCU calcium uniporter complex","protein_coding"
"Mp6g12780.2","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g14550.1","No alias","Marchantia polymorpha","protein kinase (L-lectin)","protein_coding"
"Mp6g15630.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g20060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g20950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g02470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g02800.1","No alias","Marchantia polymorpha","Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana (sp|q8vzn9|p2c11_arath : 142.0)","protein_coding"
"Mp7g03090.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g03180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g06110.1","No alias","Marchantia polymorpha","Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q0dc89|msrb1_orysj : 216.0)","protein_coding"
"Mp7g06210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g11540.1","No alias","Marchantia polymorpha","Phosphoglycerate kinase, cytosolic OS=Triticum aestivum (sp|p12783|pgky_wheat : 142.0)","protein_coding"
"Mp7g16030.1","No alias","Marchantia polymorpha","component PsbTn of PS-II complex","protein_coding"
"Mp7g16410.1","No alias","Marchantia polymorpha","Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 147.0)","protein_coding"
"Mp7g16860.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17080.1","No alias","Marchantia polymorpha","Peroxidase 57 OS=Arabidopsis thaliana (sp|q43729|per57_arath : 228.0)","protein_coding"
"Mp7g17390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17640.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g00970.1","No alias","Marchantia polymorpha","regulator component DET1 of COP10-DET1 (CDD) subcomplex","protein_coding"
"Mp8g04850.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g10770.1","No alias","Marchantia polymorpha","PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana (sp|q9lxx5|ppd6_arath : 290.0)","protein_coding"
"Mp8g11420.1","No alias","Marchantia polymorpha","Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii (sp|p93107|pf20_chlre : 348.0)","protein_coding"
"Mp8g12430.1","No alias","Marchantia polymorpha","Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1q1|tl203_arath : 302.0)","protein_coding"
"Mp8g12750.1","No alias","Marchantia polymorpha","guanosine deaminase","protein_coding"
"Mp8g13180.1","No alias","Marchantia polymorpha","component LHCa2 of LHC-I complex","protein_coding"
"Mp8g14680.1","No alias","Marchantia polymorpha","mechanosensitive ion channel (MSL)","protein_coding"
"Mp8g16060.1","No alias","Marchantia polymorpha","uricase","protein_coding"
"Mp8g17190.1","No alias","Marchantia polymorpha","2-keto acid transporter (BAT)","protein_coding"
"Mp8g17330.1","No alias","Marchantia polymorpha","acyl carrier protein (ptACP)","protein_coding"
"Mp8g17340.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"MpVg00180.1","No alias","Marchantia polymorpha","No annotation","protein_coding"
"Potri.001G070500","No alias","Populus trichocarpa","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Potri.005G067400","No alias","Populus trichocarpa","inhibitor-3","protein_coding"
"Potri.007G101900","No alias","Populus trichocarpa","inhibitor-3","protein_coding"
"Potri.008G016801","No alias","Populus trichocarpa","F1F0-ATPase inhibitor protein, putative","protein_coding"
"Potri.010G240401","No alias","Populus trichocarpa","F1F0-ATPase inhibitor protein, putative","protein_coding"
"Pp1s100_253V6","No alias","Physcomitrella patens","T5J17.30; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s106_50V6","No alias","Physcomitrella patens","pap associated domain containing 5","protein_coding"
"Pp1s110_49V6","No alias","Physcomitrella patens","transcription elongation factor s-","protein_coding"
"Pp1s110_9V6","No alias","Physcomitrella patens","FLJ36144; hypothetical protein FLJ36144 [Homo sapiens]","protein_coding"
"Pp1s114_181V6","No alias","Physcomitrella patens","poly (adp-ribose) polymerase member 1","protein_coding"
"Pp1s131_142V6","No alias","Physcomitrella patens","cell division control protein 15","protein_coding"
"Pp1s134_26V6","No alias","Physcomitrella patens","small nuclear ribonucleoprotein polypeptide a","protein_coding"
"Pp1s143_154V6","No alias","Physcomitrella patens","Hypothetical protein C03B1.10 in chromosome X [Caenorhabditis elegans]","protein_coding"
"Pp1s143_174V6","No alias","Physcomitrella patens","glucose-6-phosphate translocator","protein_coding"
"Pp1s144_26V6","No alias","Physcomitrella patens","pentatricopeptide repeat-containing","protein_coding"
"Pp1s145_1V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s151_75V6","No alias","Physcomitrella patens","asc1-like protein 1","protein_coding"
"Pp1s157_20V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s15_446V6","No alias","Physcomitrella patens","hypothetical protein, conserved [Cyanidioschyzon merolae]","protein_coding"
"Pp1s15_475V6","No alias","Physcomitrella patens","transmembrane protein 115","protein_coding"
"Pp1s161_120V6","No alias","Physcomitrella patens","rvde1","protein_coding"
"Pp1s168_89V6","No alias","Physcomitrella patens","cysteine desulfurase","protein_coding"
"Pp1s171_14V6","No alias","Physcomitrella patens","subfamily member 13","protein_coding"
"Pp1s187_18V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s189_95V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s18_189V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s192_79V6","No alias","Physcomitrella patens","T10F18.4; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s194_77V6","No alias","Physcomitrella patens","origin recognition complex subunit","protein_coding"
"Pp1s197_43V6","No alias","Physcomitrella patens","F16D14.19; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s19_89V6","No alias","Physcomitrella patens","F2N1.34; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s1_374V6","No alias","Physcomitrella patens","xyloglucan galactosyltransferase","protein_coding"
"Pp1s20_280V6","No alias","Physcomitrella patens","ring finger","protein_coding"
"Pp1s210_105V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s210_36V6","No alias","Physcomitrella patens","minichromosome maintenance protein","protein_coding"
"Pp1s212_107V6","No alias","Physcomitrella patens","serine acetyltransferase mitochondrial","protein_coding"
"Pp1s212_83V6","No alias","Physcomitrella patens","clasp (clip-associated protein) binding","protein_coding"
"Pp1s21_309V6","No alias","Physcomitrella patens","MKM21.80; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s221_85V6","No alias","Physcomitrella patens","T16L1.140; dynamin-like protein 2a (ADL2a) [Arabidopsis thaliana]","protein_coding"
"Pp1s22_269V6","No alias","Physcomitrella patens","chloroplast lumen common family protein","protein_coding"
"Pp1s236_54V6","No alias","Physcomitrella patens","PREDICTED: hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s237_18V6","No alias","Physcomitrella patens","chromosome-associated kinesin","protein_coding"
"Pp1s23_261V6","No alias","Physcomitrella patens","peptidyl-prolyl cis-trans isomerase cpr7","protein_coding"
"Pp1s248_17V6","No alias","Physcomitrella patens","F24K9.26; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s255_64V6","No alias","Physcomitrella patens","ruvb-like 2","protein_coding"
"Pp1s25_63V6","No alias","Physcomitrella patens","glycoside hydrolase family 13 protein","protein_coding"
"Pp1s26_38V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s270_51V6","No alias","Physcomitrella patens","2-oxoglutarate e1 subunit","protein_coding"
"Pp1s278_42V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s28_266V6","No alias","Physcomitrella patens","dna replication licensing factor","protein_coding"
"Pp1s307_72V6","No alias","Physcomitrella patens","radical sam cfr family","protein_coding"
"Pp1s324_22V6","No alias","Physcomitrella patens","phospholipase d","protein_coding"
"Pp1s326_15V6","No alias","Physcomitrella patens","T5I7.16; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s33_280V6","No alias","Physcomitrella patens","T26J12.19; armadillo/beta-catenin repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s33_75V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s347_30V6","No alias","Physcomitrella patens","fkbp-type peptidyl-prolyl cis-trans isomerase 4","protein_coding"
"Pp1s34_256V6","No alias","Physcomitrella patens","protein phosphatase regulatory","protein_coding"
"Pp1s352_32V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s355_49V6","No alias","Physcomitrella patens","dna replication licensing factor mcm5","protein_coding"
"Pp1s35_209V6","No alias","Physcomitrella patens","tip120 protein","protein_coding"
"Pp1s35_259V6","No alias","Physcomitrella patens","pre-mrna cleavage factor 25kd","protein_coding"
"Pp1s35_350V6","No alias","Physcomitrella patens","pentatricopeptide repeat-containing","protein_coding"
"Pp1s365_5V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s36_183V6","No alias","Physcomitrella patens","26s protease regulatory subunit 6b","protein_coding"
"Pp1s370_6V6","No alias","Physcomitrella patens","outer membrane lipoprotein","protein_coding"
"Pp1s387_34V6","No alias","Physcomitrella patens","mannosyl-oligosaccharide alpha- -","protein_coding"
"Pp1s38_401V6","No alias","Physcomitrella patens","histidyl-trna synthetase","protein_coding"
"Pp1s39_108V6","No alias","Physcomitrella patens","nadh dehydrogenase subunit 1","protein_coding"
"Pp1s41_177V6","No alias","Physcomitrella patens","aldehyde dehydrogenase","protein_coding"
"Pp1s42_88V6","No alias","Physcomitrella patens","T9L3.90; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s431_20V6","No alias","Physcomitrella patens","F28M20.210; UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related [Arabidopsis thaliana]","protein_coding"
"Pp1s469_14V6","No alias","Physcomitrella patens","POLR2A; polymerase (RNA) II (DNA directed) polypeptide A, 220kDa [EC:2.7.7.6] [KO:K03006] [Homo sapiens]","protein_coding"
"Pp1s48_160V6","No alias","Physcomitrella patens","at5g13610 msh12_7","protein_coding"
"Pp1s51_217V6","No alias","Physcomitrella patens","iron-binding protein","protein_coding"
"Pp1s51_69V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s52_58V6","No alias","Physcomitrella patens","gamma complex associated protein 5","protein_coding"
"Pp1s53_93V6","No alias","Physcomitrella patens","serine threonine kinase 36partial","protein_coding"
"Pp1s54_273V6","No alias","Physcomitrella patens","cellular apoptosis susceptibility protein","protein_coding"
"Pp1s59_321V6","No alias","Physcomitrella patens","Unknown mitochondrial protein At2g27730 [Arabidopsis thaliana]","protein_coding"
"Pp1s61_131V6","No alias","Physcomitrella patens","acyltransferase like 1","protein_coding"
"Pp1s62_38V6","No alias","Physcomitrella patens","beach domain-containing protein","protein_coding"
"Pp1s62_89V6","No alias","Physcomitrella patens","rhomboid family protein","protein_coding"
"Pp1s65_269V6","No alias","Physcomitrella patens","F11A17.15; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s68_169V6","No alias","Physcomitrella patens","arogenate prephenate dehydratase","protein_coding"
"Pp1s71_314V6","No alias","Physcomitrella patens","follicular lymphoma variant translocation 1","protein_coding"
"Pp1s78_11V6","No alias","Physcomitrella patens","aml1 (arabidopsis mei2-like protein 1) rna binding protein binding","protein_coding"
"Pp1s79_21V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s7_190V6","No alias","Physcomitrella patens","dna methyltransferase 1-associated protein 1","protein_coding"
"Pp1s80_57V6","No alias","Physcomitrella patens","ribose-phosphate pyrophosphokinase 4","protein_coding"
"Pp1s80_86V6","No alias","Physcomitrella patens","transferring glycosyl groups","protein_coding"
"Pp1s89_170V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s8_180V6","No alias","Physcomitrella patens","translocated promoter region (to activated met oncogene)","protein_coding"
"Pp1s92_91V6","No alias","Physcomitrella patens","uncharacterized protein kiaa0406","protein_coding"
"Pp1s98_148V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s9_156V6","No alias","Physcomitrella patens","minichromosome maintenance 3","protein_coding"
"Pp1s9_29V6","No alias","Physcomitrella patens","nucleolar gtp-binding protein","protein_coding"
"PSME_00000088-RA","No alias","Pseudotsuga menziesii","(at2g28370 : 132.0) Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G37200.1); Has 210 Blast hits to 210 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 210; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00000094-RA","No alias","Pseudotsuga menziesii","(at1g44900 : 978.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 270.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1956.0) &  (original description: no original description)","protein_coding"
"PSME_00000163-RA","No alias","Pseudotsuga menziesii","(at4g39880 : 156.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00000886-RA","No alias","Pseudotsuga menziesii","(at1g56090 : 204.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G30480.2); Has 5535 Blast hits to 5000 proteins in 436 species: Archae - 33; Bacteria - 410; Metazoa - 2580; Fungi - 616; Plants - 880; Viruses - 6; Other Eukaryotes - 1010 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00000897-RA","No alias","Pseudotsuga menziesii","(at1g13330 : 281.0) Encodes the Arabidopsis Hop2 homologue. In other species, Hop2 is proposed to be involved in inter-homolog bias in double strand break repair.; Arabidopsis Hop2 homolog (AHP2); CONTAINS InterPro DOMAIN/s: Tat binding protein 1-interacting (InterPro:IPR010776); Has 3022 Blast hits to 2708 proteins in 418 species: Archae - 82; Bacteria - 427; Metazoa - 1139; Fungi - 246; Plants - 98; Viruses - 21; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00000910-RA","No alias","Pseudotsuga menziesii","(at5g05290 : 323.0) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin A2 (EXPA2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A8 (TAIR:AT2G40610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40636|expa2_orysa : 318.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00002005-RA","No alias","Pseudotsuga menziesii","(at3g29575 : 108.0) ABI five binding protein 3 (AFP3); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 196 Blast hits to 190 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 184; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00002158-RA","No alias","Pseudotsuga menziesii","(at2g16440 : 978.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 300.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1956.0) &  (original description: no original description)","protein_coding"
"PSME_00003212-RA","No alias","Pseudotsuga menziesii","(at1g05675 : 291.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1). & (q41819|iaag_maize : 234.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"PSME_00003830-RA","No alias","Pseudotsuga menziesii","(at2g39050 : 135.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00003949-RA","No alias","Pseudotsuga menziesii","(at2g42820 : 135.0) HVA22-like protein F (HVA22F); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07764|hva22_horvu : 86.3) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00005117-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00005141-RA","No alias","Pseudotsuga menziesii","(at2g01170 : 255.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity.  Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"PSME_00006475-RA","No alias","Pseudotsuga menziesii","(at4g38540 : 265.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G05320.1); Has 5392 Blast hits to 5382 proteins in 1070 species: Archae - 48; Bacteria - 3093; Metazoa - 5; Fungi - 1172; Plants - 539; Viruses - 0; Other Eukaryotes - 535 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00006885-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 236.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at1g61720 : 229.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00009021-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 271.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29736|myra_sinal : 191.0) Myrosinase MA1 (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"PSME_00009228-RA","No alias","Pseudotsuga menziesii","(at2g01540 : 95.1) Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70790.1); Has 3447 Blast hits to 2959 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1768; Fungi - 600; Plants - 764; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00009702-RA","No alias","Pseudotsuga menziesii","(at2g16850 : 436.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 427.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"PSME_00009830-RA","No alias","Pseudotsuga menziesii","(at5g63840 : 90.5) radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.; RADIAL SWELLING 3 (RSW3); FUNCTIONS IN: glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cadmium ion, cellulose biosynthetic process, defense response to bacterium, unidimensional cell growth; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322); BEST Arabidopsis thaliana protein match is: heteroglycan glucosidase 1 (TAIR:AT3G23640.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) &  (original description: no original description)","protein_coding"
"PSME_00010895-RA","No alias","Pseudotsuga menziesii",""(at5g28840 : 704.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity.  The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; ""GDP-D-mannose 3',5'-epimerase"" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (q338b5|gme1_orysa : 696.0) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 1) (OsGME-1) - Oryza sativa (Rice) & (reliability: 1408.0) &  (original description: no original description)"","protein_coding"
"PSME_00010923-RA","No alias","Pseudotsuga menziesii","(at5g66840 : 210.0) SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00011205-RA","No alias","Pseudotsuga menziesii","(p48977|adh_maldo : 535.0) Alcohol dehydrogenase (EC 1.1.1.1) - Malus domestica (Apple) (Malus sylvestris) & (at1g77120 : 531.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (reliability: 1062.0) &  (original description: no original description)","protein_coding"
"PSME_00011657-RA","No alias","Pseudotsuga menziesii","(at1g77380 : 530.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00012490-RA","No alias","Pseudotsuga menziesii","(at1g32520 : 295.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00012699-RA","No alias","Pseudotsuga menziesii","(at3g62390 : 345.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 6 (TBL6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 1344 Blast hits to 1327 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00012743-RA","No alias","Pseudotsuga menziesii","(at3g21420 : 233.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (q07512|fls_pethy : 218.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Petunia hybrida (Petunia) & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"PSME_00013230-RA","No alias","Pseudotsuga menziesii","(at5g05360 : 119.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00013344-RA","No alias","Pseudotsuga menziesii","(p93665|dcs1_goshi : 255.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at4g16730 : 253.0) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00013464-RA","No alias","Pseudotsuga menziesii","(at1g55760 : 383.0) BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2); Has 5280 Blast hits to 5249 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 3933; Fungi - 29; Plants - 1085; Viruses - 19; Other Eukaryotes - 214 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"PSME_00013469-RA","No alias","Pseudotsuga menziesii","(at4g21410 : 440.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (CRK29); FUNCTIONS IN: kinase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (TAIR:AT4G21400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8l4h4|nork_medtr : 215.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"PSME_00013866-RA","No alias","Pseudotsuga menziesii","(q6z2t3|lsi1_orysa : 265.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (at5g37820 : 229.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00014366-RA","No alias","Pseudotsuga menziesii","(at3g51130 : 545.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00014719-RA","No alias","Pseudotsuga menziesii","(at4g40060 : 125.0) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.; homeobox protein 16 (HB16); FUNCTIONS IN: sequence-specific DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 6 (TAIR:AT2G22430.1); Has 9713 Blast hits to 9689 proteins in 534 species: Archae - 2; Bacteria - 4; Metazoa - 7673; Fungi - 210; Plants - 1646; Viruses - 5; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00014826-RA","No alias","Pseudotsuga menziesii","(at2g32950 : 186.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 186.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00015436-RA","No alias","Pseudotsuga menziesii","(at2g16850 : 425.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 424.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"PSME_00016514-RA","No alias","Pseudotsuga menziesii","(at2g07690 : 870.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 165.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1740.0) &  (original description: no original description)","protein_coding"
"PSME_00016582-RA","No alias","Pseudotsuga menziesii","(at2g01820 : 664.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink). & (o24585|cri4_maize : 181.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1328.0) &  (original description: no original description)","protein_coding"
"PSME_00016681-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00016931-RA","No alias","Pseudotsuga menziesii","(at2g47850 : 171.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1); Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0; Bacteria - 7; Metazoa - 368; Fungi - 218; Plants - 971; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (q5nav3|zfnl3_orysa : 163.0) Zinc finger CCCH domain-containing protein ZFN-like 3 - Oryza sativa (Rice) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00017037-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00017192-RA","No alias","Pseudotsuga menziesii","(at4g33945 : 207.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00017426-RA","No alias","Pseudotsuga menziesii","(at1g75850 : 180.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"PSME_00017488-RA","No alias","Pseudotsuga menziesii","(at4g36360 : 1137.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 1098.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (reliability: 2274.0) &  (original description: no original description)","protein_coding"
"PSME_00017619-RA","No alias","Pseudotsuga menziesii","(at3g53140 : 434.0) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, protein dimerization activity, O-methyltransferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 3047 Blast hits to 3042 proteins in 532 species: Archae - 0; Bacteria - 810; Metazoa - 98; Fungi - 512; Plants - 1526; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (q8w013|comt1_catro : 275.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"PSME_00017681-RA","No alias","Pseudotsuga menziesii","(at3g13320 : 177.0) low affinity calcium antiporter CAX2; cation exchanger 2 (CAX2); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 5 (TAIR:AT1G55730.2); Has 3194 Blast hits to 3028 proteins in 968 species: Archae - 39; Bacteria - 1824; Metazoa - 15; Fungi - 731; Plants - 247; Viruses - 0; Other Eukaryotes - 338 (source: NCBI BLink). & (q6k1c4|cax3_orysa : 172.0) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger 3) (OsCAX3) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00018531-RA","No alias","Pseudotsuga menziesii","(at1g23740 : 136.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00018700-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018800-RA","No alias","Pseudotsuga menziesii","(at2g04160 : 798.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1596.0) &  (original description: no original description)","protein_coding"
"PSME_00019067-RA","No alias","Pseudotsuga menziesii","(at1g52150 : 1149.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 2298.0) &  (original description: no original description)","protein_coding"
"PSME_00020247-RA","No alias","Pseudotsuga menziesii","(at3g47470 : 395.0) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 240.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"PSME_00021221-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021856-RA","No alias","Pseudotsuga menziesii","(at2g24280 : 217.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, lysosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT5G65760.1); Has 1253 Blast hits to 1217 proteins in 170 species: Archae - 0; Bacteria - 7; Metazoa - 611; Fungi - 189; Plants - 249; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"PSME_00021886-RA","No alias","Pseudotsuga menziesii","(at2g44580 : 90.9) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00022411-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022414-RA","No alias","Pseudotsuga menziesii","(at1g44970 : 90.9) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G18150.1); Has 4592 Blast hits to 4563 proteins in 305 species: Archae - 0; Bacteria - 10; Metazoa - 5; Fungi - 193; Plants - 4307; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (p22195|per1_arahy : 85.9) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00022576-RA","No alias","Pseudotsuga menziesii","(at5g55120 : 286.0) Encodes a GDP-L-galactose phosphorylase, with similar biochemical properties as VTC2.; VITAMIN C DEFECTIVE 5 (VTC5); BEST Arabidopsis thaliana protein match is: mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase (GDP)s;galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT4G26850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"PSME_00022891-RA","No alias","Pseudotsuga menziesii","(at5g07050 : 397.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"PSME_00023753-RA","No alias","Pseudotsuga menziesii","(at4g08900 : 157.0) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (o49046|argi_soybn : 135.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00023754-RA","No alias","Pseudotsuga menziesii","(at4g08870 : 194.0) Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment.; Arginase/deacetylase superfamily protein; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: response to jasmonic acid stimulus, polyamine metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: sepal vascular system, cotyledon vascular system, root vascular system, style, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035); BEST Arabidopsis thaliana protein match is: arginase (TAIR:AT4G08900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49046|argi_soybn : 182.0) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00024138-RA","No alias","Pseudotsuga menziesii","(at3g27160 : 80.9) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"PSME_00024602-RA","No alias","Pseudotsuga menziesii","(at1g30690 : 421.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"PSME_00025168-RA","No alias","Pseudotsuga menziesii","(at2g35605 : 99.4) SWIB/MDM2 domain superfamily protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835); BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT1G31760.1); Has 1125 Blast hits to 1022 proteins in 233 species: Archae - 0; Bacteria - 211; Metazoa - 71; Fungi - 192; Plants - 413; Viruses - 10; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"PSME_00025347-RA","No alias","Pseudotsuga menziesii","(at1g25440 : 88.6) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"PSME_00025348-RA","No alias","Pseudotsuga menziesii","(at1g25440 : 99.4) B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G68520.1); Has 3476 Blast hits to 2333 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 3380; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"PSME_00025946-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 338.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29736|myra_sinal : 244.0) Myrosinase MA1 (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00026306-RA","No alias","Pseudotsuga menziesii","(at1g75850 : 203.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00026943-RA","No alias","Pseudotsuga menziesii","(p09444|lea34_goshi : 192.0) Late embryogenesis abundant protein D-34 (LEA D-34) - Gossypium hirsutum (Upland cotton) & (at3g22490 : 191.0) Seed maturation protein; CONTAINS InterPro DOMAIN/s: Seed maturation protein (InterPro:IPR007011); BEST Arabidopsis thaliana protein match is: Seed maturation protein (TAIR:AT3G22500.1); Has 198 Blast hits to 183 proteins in 40 species: Archae - 2; Bacteria - 41; Metazoa - 7; Fungi - 0; Plants - 144; Viruses - 3; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00027970-RA","No alias","Pseudotsuga menziesii","(at1g66920 : 278.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1). & (p17801|kpro_maize : 160.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00027999-RA","No alias","Pseudotsuga menziesii","(at1g23740 : 207.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 95.5) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00028641-RA","No alias","Pseudotsuga menziesii","(at1g12790 : 188.0) CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00029718-RA","No alias","Pseudotsuga menziesii","(at1g30380 : 108.0) Encodes subunit K of photosystem I reaction center.; photosystem I subunit K (PSAK); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaK, plant (InterPro:IPR017493), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 85 Blast hits to 85 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9zt05|psak_medsa : 107.0) Photosystem I reaction center subunit psaK, chloroplast precursor (Photosystem I subunit X) (PSI-K) - Medicago sativa (Alfalfa) & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00029917-RA","No alias","Pseudotsuga menziesii","(at1g29630 : 530.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 102.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00030077-RA","No alias","Pseudotsuga menziesii","(at4g22530 : 284.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G10830.1); Has 1214 Blast hits to 1209 proteins in 451 species: Archae - 2; Bacteria - 749; Metazoa - 75; Fungi - 155; Plants - 166; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"PSME_00030161-RA","No alias","Pseudotsuga menziesii","(at2g31660 : 199.0) SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling.  Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport.  Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity.  SAD2 was ubiquitously expressed at low levels in all tissues except flowers.  SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress,  increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).; SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: protein import into nucleus, docking, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.1); Has 3689 Blast hits to 2792 proteins in 293 species: Archae - 3; Bacteria - 183; Metazoa - 1271; Fungi - 834; Plants - 368; Viruses - 60; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00030797-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031334-RA","No alias","Pseudotsuga menziesii","(at4g35300 : 194.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00032144-RA","No alias","Pseudotsuga menziesii","(at4g16740 : 225.0) Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect <i>Plutella xylostella</i>. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity.; terpene synthase 03 (TPS03); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93665|dcs1_goshi : 214.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"PSME_00032165-RA","No alias","Pseudotsuga menziesii","(at1g11080 : 590.0) serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1). & (p55748|cbp22_horvu : 429.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 1126.0) &  (original description: no original description)","protein_coding"
"PSME_00032304-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00032510-RA","No alias","Pseudotsuga menziesii","(at4g16730 : 184.0) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p59287|cass_ricco : 184.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00032616-RA","No alias","Pseudotsuga menziesii","(at1g73390 : 424.0) Endosomal targeting BRO1-like domain-containing protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 848.0) &  (original description: no original description)","protein_coding"
"PSME_00032987-RA","No alias","Pseudotsuga menziesii","(at5g13200 : 179.0) GRAM domain family protein; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00032988-RA","No alias","Pseudotsuga menziesii","(at5g13200 : 149.0) GRAM domain family protein; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00033230-RA","No alias","Pseudotsuga menziesii","(at1g73580 : 112.0) Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G17980.1); Has 4999 Blast hits to 4119 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 2826; Fungi - 634; Plants - 1136; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00033395-RA","No alias","Pseudotsuga menziesii","(at3g07350 : 149.0) Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00033686-RA","No alias","Pseudotsuga menziesii","(at2g36870 : 309.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (p93349|xth_tobac : 183.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"PSME_00033929-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 318.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 221.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"PSME_00034099-RA","No alias","Pseudotsuga menziesii","(at3g62390 : 256.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 6 (TBL6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1); Has 1344 Blast hits to 1327 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1344; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00034772-RA","No alias","Pseudotsuga menziesii","(at2g32010 : 594.0) Encodes an inositol polyphosphate 5í-phosphatase (5PTase).  Mediating phosphoinositide signaling.  Involved in establishment of foliar vein patterns.; CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1). & (reliability: 1188.0) &  (original description: no original description)","protein_coding"
"PSME_00034955-RA","No alias","Pseudotsuga menziesii","(at4g17100 : 436.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"PSME_00035415-RA","No alias","Pseudotsuga menziesii","(at2g41380 : 257.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"PSME_00035448-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035744-RA","No alias","Pseudotsuga menziesii","(p22302|sodf_nicpl : 211.0) Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g25100 : 207.0) Fe-superoxide dismutase; Fe superoxide dismutase 1 (FSD1); CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 2 (TAIR:AT5G51100.1). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00035989-RA","No alias","Pseudotsuga menziesii","(at1g11080 : 565.0) serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1). & (p55748|cbp22_horvu : 378.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 1074.0) &  (original description: no original description)","protein_coding"
"PSME_00036067-RA","No alias","Pseudotsuga menziesii","(at2g44610 : 316.0) Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.; RAB6A; FUNCTIONS IN: protein binding, GTP binding; INVOLVED IN: secretion by cell; LOCATED IN: plasma membrane, membrane fraction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1); Has 26612 Blast hits to 26583 proteins in 727 species: Archae - 21; Bacteria - 159; Metazoa - 14143; Fungi - 3598; Plants - 2938; Viruses - 20; Other Eukaryotes - 5733 (source: NCBI BLink). & (p31583|rhn1_nicpl : 133.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"PSME_00036215-RA","No alias","Pseudotsuga menziesii","(q9xh44|cet1_tobac : 199.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (at1g65480 : 195.0) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.; FLOWERING LOCUS T (FT); FUNCTIONS IN: phosphatidylethanolamine binding, protein binding; INVOLVED IN: photoperiodism, flowering, positive regulation of flower development, regulation of flower development; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT4G20370.1); Has 2182 Blast hits to 2182 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 594; Fungi - 140; Plants - 1404; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00036251-RA","No alias","Pseudotsuga menziesii","(at1g11080 : 524.0) serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1). & (p55748|cbp22_horvu : 385.0) Serine carboxypeptidase II-2 precursor (EC 3.4.16.6) (CP-MII.2) [Contains: Serine carboxypeptidase II-2 chain A; Serine carboxypeptidase II-2 chain B] (Fragment) - Hordeum vulgare (Barley) & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"PSME_00036356-RA","No alias","Pseudotsuga menziesii","(at4g22920 : 259.0) Similar to the tomato senescence-inducible chloroplast stay-green protein 1.  It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves.; NON-YELLOWING 1 (NYE1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chlorophyll catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00036417-RA","No alias","Pseudotsuga menziesii","(at5g27280 : 154.0) Zim17-type zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT1G68730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00037287-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00037477-RA","No alias","Pseudotsuga menziesii","(at5g23350 : 142.0) GRAM domain-containing protein / ABA-responsive protein-related; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain-containing protein / ABA-responsive protein-related (TAIR:AT5G23370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00039350-RA","No alias","Pseudotsuga menziesii","(at2g33570 : 489.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"PSME_00040966-RA","No alias","Pseudotsuga menziesii","(at2g35530 : 107.0) Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1.  The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.; basic region/leucine zipper transcription factor 16 (bZIP16); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), G-box binding, MFMR (InterPro:IPR012900), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 68 (TAIR:AT1G32150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q99089|cprf1_petcr : 86.3) Common plant regulatory factor CPRF-1 - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00041040-RA","No alias","Pseudotsuga menziesii","(at4g34110 : 122.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00041763-RA","No alias","Pseudotsuga menziesii","(at4g26850 : 152.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00042195-RA","No alias","Pseudotsuga menziesii","(at2g45660 : 177.0) Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.; AGAMOUS-like 20 (AGL20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, response to cold, positive regulation of flower development, maintenance of inflorescence meristem identity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 42 (TAIR:AT5G62165.3); Has 7364 Blast hits to 7361 proteins in 926 species: Archae - 0; Bacteria - 16; Metazoa - 673; Fungi - 316; Plants - 6262; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (q9xj60|mad50_orysa : 171.0) MADS-box transcription factor 50 (OsMADS50) (Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like) (OsSOC1) (Protein AGAMOUS-like 20) (RMADS208) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00042910-RA","No alias","Pseudotsuga menziesii",""(at2g45510 : 152.0) member of CYP704A; ""cytochrome P450, family 704, subfamily A, polypeptide 2"" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)"","protein_coding"
"PSME_00043176-RA","No alias","Pseudotsuga menziesii","(at1g22400 : 251.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (q41819|iaag_maize : 161.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"PSME_00043726-RA","No alias","Pseudotsuga menziesii","(at1g80760 : 300.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (p08995|no26_soybn : 206.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00043849-RA","No alias","Pseudotsuga menziesii","(q5kts5|grdh_dauca : 349.0) Glucose and ribitol dehydrogenase (EC 1.1.1.-) (Carrot ABA-induced in somatic embryos 5 protein) - Daucus carota (Carrot) & (at3g05260 : 332.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G54870.1); Has 119218 Blast hits to 119012 proteins in 3566 species: Archae - 965; Bacteria - 78718; Metazoa - 5045; Fungi - 6123; Plants - 2479; Viruses - 7; Other Eukaryotes - 25881 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00044192-RA","No alias","Pseudotsuga menziesii","(at1g66910 : 303.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (p17801|kpro_maize : 190.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00045286-RA","No alias","Pseudotsuga menziesii","(at4g33540 : 149.0) metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00045423-RA","No alias","Pseudotsuga menziesii","(at1g75850 : 205.0) VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"PSME_00045693-RA","No alias","Pseudotsuga menziesii","(at5g14700 : 264.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (p51110|dfra_vitvi : 111.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"PSME_00045768-RA","No alias","Pseudotsuga menziesii","(at3g25410 : 377.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: bile acid transporter 5 (TAIR:AT4G12030.2); Has 4132 Blast hits to 4124 proteins in 1073 species: Archae - 57; Bacteria - 2245; Metazoa - 386; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 1216 (source: NCBI BLink). & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"PSME_00045787-RA","No alias","Pseudotsuga menziesii","(at5g46800 : 409.0) Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein; A BOUT DE SOUFFLE (BOU); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, ornithine transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, chloroplast, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G33820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00045791-RA","No alias","Pseudotsuga menziesii","(at5g55120 : 99.8) Encodes a GDP-L-galactose phosphorylase, with similar biochemical properties as VTC2.; VITAMIN C DEFECTIVE 5 (VTC5); BEST Arabidopsis thaliana protein match is: mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase (GDP)s;galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT4G26850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"PSME_00046529-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047131-RA","No alias","Pseudotsuga menziesii","(at5g66460 : 457.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"PSME_00047204-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047423-RA","No alias","Pseudotsuga menziesii","(at1g28330 : 92.0) dormancy-associated protein (DRM1); dormancy-associated protein-like 1 (DYL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dormancyauxin associated (InterPro:IPR008406); BEST Arabidopsis thaliana protein match is: Dormancy/auxin associated family protein (TAIR:AT2G33830.2). & (q05349|12kd_fraan : 82.4) Auxin-repressed 12.5 kDa protein - Fragaria ananassa (Strawberry) & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"PSME_00048332-RA","No alias","Pseudotsuga menziesii","(q8sag3|adf_vitvi : 214.0) Actin-depolymerizing factor (ADF) - Vitis vinifera (Grape) & (at2g31200 : 201.0) Encodes actin depolymerizing factor 6 (ADF6).; actin depolymerizing factor 6 (ADF6); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.2); Has 1444 Blast hits to 1440 proteins in 268 species: Archae - 0; Bacteria - 3; Metazoa - 597; Fungi - 161; Plants - 515; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"PSME_00049465-RA","No alias","Pseudotsuga menziesii","(at4g26850 : 150.0) Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.; vitamin c defective 2 (VTC2); FUNCTIONS IN: in 8 functions; INVOLVED IN: response to jasmonic acid stimulus, L-ascorbic acid biosynthetic process, defense response to bacterium, response to heat, defense response by callose deposition in cell wall; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases (TAIR:AT5G55120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00049973-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00050063-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 229.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29736|myra_sinal : 166.0) Myrosinase MA1 (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00050481-RA","No alias","Pseudotsuga menziesii","(at3g58450 : 99.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 6272 Blast hits to 6041 proteins in 1248 species: Archae - 518; Bacteria - 4566; Metazoa - 135; Fungi - 97; Plants - 787; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"PSME_00051650-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052058-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052159-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052218-RA","No alias","Pseudotsuga menziesii","(at1g60390 : 486.0) polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"PSME_00052387-RA","No alias","Pseudotsuga menziesii","(at5g02600 : 97.4) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT2G37390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"PSME_00053076-RA","No alias","Pseudotsuga menziesii","(at2g29590 : 95.1) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 283 Blast hits to 282 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 92; Fungi - 21; Plants - 166; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"PSME_00053689-RA","No alias","Pseudotsuga menziesii","(at1g78370 : 207.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink). & (q03666|gstx4_tobac : 205.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00054431-RA","No alias","Pseudotsuga menziesii","(at2g18196 : 111.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00055415-RA","No alias","Pseudotsuga menziesii","(at4g37000 : 218.0) Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection.  Its product was shown to display  red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae.; ACCELERATED CELL DEATH 2 (ACD2); FUNCTIONS IN: red chlorophyll catabolite reductase activity; INVOLVED IN: chlorophyll catabolic process, defense response, incompatible interaction, regulation of programmed cell death, regulation of plant-type hypersensitive response; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Red chlorophyll catabolite reductase (InterPro:IPR009439); Has 181 Blast hits to 181 proteins in 30 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (q9mtq6|rccr_horvu : 173.0) Red chlorophyll catabolite reductase (EC 1.-.-.-) (RCC reductase) (HvRCCR) (Fragment) - Hordeum vulgare (Barley) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"Seita.1G001900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G034400.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G067800.1","No alias","Setaria italica ","subunit f of ATP synthase membrane MF0 subcomplex","protein_coding"
"Seita.1G167300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G167400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G177300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G181200.1","No alias","Setaria italica ","regulatory protein *(IF1) of ATP synthase activity","protein_coding"
"Seita.1G203200.1","No alias","Setaria italica ","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding"
"Seita.1G215900.1","No alias","Setaria italica ","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Seita.1G250200.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.1G282700.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding"
"Seita.1G294700.1","No alias","Setaria italica ","NADPH-dependent thioredoxin reductase *(NTRC)","protein_coding"
"Seita.1G325400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G352100.1","No alias","Setaria italica ","component *(MCM5) of MCM replicative DNA helicase complex","protein_coding"
"Seita.1G356900.1","No alias","Setaria italica ","sliding clamp protein *(PCNA)","protein_coding"
"Seita.1G376600.1","No alias","Setaria italica ","component *(RPA2) of RPA presynaptic filament assembly factor complex & component *(RPA2) of single-stranded-DNA binding RPA complex","protein_coding"
"Seita.2G025600.1","No alias","Setaria italica ","L-lectin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G038000.1","No alias","Setaria italica ","component *(TEN1) of telomere integrity maintenance complex","protein_coding"
"Seita.2G040600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G041500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G058900.1","No alias","Setaria italica ","transcriptional repressor *(IAA/AUX)","protein_coding"
"Seita.2G155300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G252700.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.2G392300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G403200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G442100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G014100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G029000.1","No alias","Setaria italica ","GARP subgroup PHL transcription factor","protein_coding"
"Seita.3G075300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G082800.1","No alias","Setaria italica ","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G098900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G113900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G164400.1","No alias","Setaria italica ","ATP exporter *(ANT1) & solute transporter *(MTCC)","protein_coding"
"Seita.3G205800.1","No alias","Setaria italica ","component *(MCM3) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G232800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G241400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G281800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G299100.1","No alias","Setaria italica ","asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Seita.3G306100.1","No alias","Setaria italica ","EC_4.2 carbon-oxygen lyase & enolase","protein_coding"
"Seita.3G310000.1","No alias","Setaria italica ","protein de-S-acylation enzyme *(ABAPT)","protein_coding"
"Seita.3G335500.1","No alias","Setaria italica ","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G367100.1","No alias","Setaria italica ","GTPase effector *(BDR)","protein_coding"
"Seita.3G373100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G001900.1","No alias","Setaria italica ","homogentisate dioxygenase *(HGO) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)","protein_coding"
"Seita.4G007600.1","No alias","Setaria italica ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G012100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G045900.1","No alias","Setaria italica ","component *(ORC1) of origin recognition complex","protein_coding"
"Seita.4G105600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G152600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G244600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G246700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G270500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G026700.1","No alias","Setaria italica ","E3 ubiquitin ligase","protein_coding"
"Seita.5G094400.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G146700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G168500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G192100.1","No alias","Setaria italica ","component *(MCM4) of MCM replicative DNA helicase complex","protein_coding"
"Seita.5G267300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G276800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G327000.1","No alias","Setaria italica ","Patatin-type lipase","protein_coding"
"Seita.5G391800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G432800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G453200.1","No alias","Setaria italica ","class tau glutathione S-transferase","protein_coding"
"Seita.5G460400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G052200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G067100.1","No alias","Setaria italica ","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.6G067500.1","No alias","Setaria italica ","contact site modulator (VST) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"Seita.6G081700.1","No alias","Setaria italica ","TOR-dependent regulatory protein *(MRF) of protein translation","protein_coding"
"Seita.6G089200.1","No alias","Setaria italica ","ethylene signal modulator *(ARGOS)","protein_coding"
"Seita.6G144600.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding"
"Seita.6G212200.1","No alias","Setaria italica ","stress granule assembly factor *(UBP1)","protein_coding"
"Seita.6G248700.1","No alias","Setaria italica ","regulatory protein *(IF1) of ATP synthase activity","protein_coding"
"Seita.6G255300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G065800.1","No alias","Setaria italica ","regulatory protein ELP1 of PRC1 histone mono-ubiquitination complex","protein_coding"
"Seita.7G073600.1","No alias","Setaria italica ","primase component *(POLA3) of DNA polymerase alpha complex","protein_coding"
"Seita.7G078300.1","No alias","Setaria italica ","substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)","protein_coding"
"Seita.7G207200.1","No alias","Setaria italica ","EC_4.3 carbon-nitrogen lyase & hydroxy-tetrahydrodihydrodipicolinate synthase","protein_coding"
"Seita.7G231200.1","No alias","Setaria italica ","nucleoredoxin *(NRX) & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Seita.7G263700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G001600.1","No alias","Setaria italica ","component *(TON1) of TON1-TRM-PP2A (TTP) preprophase band formation complex","protein_coding"
"Seita.8G055500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G067500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G112100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G121500.1","No alias","Setaria italica ","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"Seita.8G157300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G180600.1","No alias","Setaria italica ","transcriptional regulator *(POPEYE) of iron homeostasis & bHLH-type transcription factor","protein_coding"
"Seita.8G220400.1","No alias","Setaria italica ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G012300.1","No alias","Setaria italica ","component *(NUF2) of NDC80 outer kinetochore complex","protein_coding"
"Seita.9G097000.1","No alias","Setaria italica ","calcium sensor *(CML)","protein_coding"
"Seita.9G145300.1","No alias","Setaria italica ","deoxyuridine triphosphatase *(DUT) & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Seita.9G177600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G286800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G315100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G319400.1","No alias","Setaria italica ","CDC7 protein kinase & adherin-recruiting kinase *(CDC7) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G374300.1","No alias","Setaria italica ","cation antiporter *(CAX)","protein_coding"
"Seita.9G387000.1","No alias","Setaria italica ","component *(ILP1) of Intron-Lariat Spliceosome complex","protein_coding"
"Seita.9G431600.1","No alias","Setaria italica ","peroxisomal acetyl-CoA synthetase *(ACN/BZU)","protein_coding"
"Seita.9G451700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G455900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G535600.1","No alias","Setaria italica ","atypical thioredoxin *(ACHT)","protein_coding"
"Seita.J010600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G023600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G038500.1","No alias","Sorghum bicolor ","amino acid transporter *(ANT)","protein_coding"
"Sobic.001G048700.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.001G056700.1","No alias","Sorghum bicolor ","bZIP class-C transcription factor","protein_coding"
"Sobic.001G067601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G111500.1","No alias","Sorghum bicolor ","phytochrome photoreceptor *(PHY)","protein_coding"
"Sobic.001G124300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G136600.1","No alias","Sorghum bicolor ","regulatory component B1 of PP2A phosphatase complexes","protein_coding"
"Sobic.001G156600.1","No alias","Sorghum bicolor ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & L-lectin protein kinase","protein_coding"
"Sobic.001G216600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G238900.1","No alias","Sorghum bicolor ","substrate adaptor *(FBS) of SCF E3 ubiquitin ligase complex","protein_coding"
"Sobic.001G255700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G295400.1","No alias","Sorghum bicolor ","CDC7 protein kinase & adherin-recruiting kinase *(CDC7) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G323400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G327400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G349900.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.001G389900.1","No alias","Sorghum bicolor ","small basic intrinsic protein *(SIP)","protein_coding"
"Sobic.001G390900.2","No alias","Sorghum bicolor ","glucose-6-phosphate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.001G394400.1","No alias","Sorghum bicolor ","temperature sensor protein *(PHY-B) & phytochrome photoreceptor *(PHY)","protein_coding"
"Sobic.001G402600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G407200.1","No alias","Sorghum bicolor ","group-SAC-II phosphoinositide 3-/4-phosphatase","protein_coding"
"Sobic.001G409200.1","No alias","Sorghum bicolor ","AS2/LOB-type transcription factor","protein_coding"
"Sobic.001G429000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G435000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G443900.1","No alias","Sorghum bicolor ","anion transporter *(NRT1/PTR)","protein_coding"
"Sobic.001G456500.1","No alias","Sorghum bicolor ","component *(RPA1) of single-stranded-DNA binding RPA complex & component *(RPA1) of RPA presynaptic filament assembly factor complex","protein_coding"
"Sobic.001G497500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G514900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G520200.1","No alias","Sorghum bicolor ","phosphoethanolamine transferase-II *(PIG-F)","protein_coding"
"Sobic.001G524300.1","No alias","Sorghum bicolor ","sphingoid long-chain base kinase *(LCBK2)","protein_coding"
"Sobic.001G535800.3","No alias","Sorghum bicolor ","de novo DNA methylase *(DRM) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.002G002500.1","No alias","Sorghum bicolor ","tobamovirus multiplication replication host factor *(TOM1)","protein_coding"
"Sobic.002G007800.1","No alias","Sorghum bicolor ","histone demethylase *(PKDM7)","protein_coding"
"Sobic.002G021200.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(DDM1)","protein_coding"
"Sobic.002G026300.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group & pyrophosphate-dependent phosphofructokinase","protein_coding"
"Sobic.002G038600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G046800.1","No alias","Sorghum bicolor ","subunit beta of E1 subcomplex of 2-oxoisovalerate dehydrogenase complex","protein_coding"
"Sobic.002G058400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G113400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G116900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G127550.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G161200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G189700.1","No alias","Sorghum bicolor ","solute transporter *(NAT)","protein_coding"
"Sobic.002G203500.2","No alias","Sorghum bicolor ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding"
"Sobic.002G214700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G278600.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase *(CYP21-1) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.002G280100.1","No alias","Sorghum bicolor ","cell cycle CDC45-recruitment factor *(MCM10)","protein_coding"
"Sobic.002G290000.2","No alias","Sorghum bicolor ","dsDNA helicase *(FANCJ)","protein_coding"
"Sobic.002G328500.2","No alias","Sorghum bicolor ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G330100.1","No alias","Sorghum bicolor ","group-I formin actin filament elongation factor","protein_coding"
"Sobic.002G351400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G409800.1","No alias","Sorghum bicolor ","EC_5.3 intramolecular oxidoreductase","protein_coding"
"Sobic.002G430500.1","No alias","Sorghum bicolor ","phosphatidylinositol phospholipase *(PI-PLC)","protein_coding"
"Sobic.003G013600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G032800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G038400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G055600.1","No alias","Sorghum bicolor ","associated component *(ETG1) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.003G055700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G057800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G070700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G086700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G103000.1","No alias","Sorghum bicolor ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G124300.2","No alias","Sorghum bicolor ","type-2 peroxiredoxin *(PrxII)","protein_coding"
"Sobic.003G137300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G146900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G161000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G183700.1","No alias","Sorghum bicolor ","component *(MCM4) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.003G187200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G219600.1","No alias","Sorghum bicolor ","autophagosome E1 ATG8/12 ubiquitin-activating enzyme *(ATG7)","protein_coding"
"Sobic.003G255700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G257000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G298100.1","No alias","Sorghum bicolor ","VOZ-type transcription factor","protein_coding"
"Sobic.003G298200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G311000.1","No alias","Sorghum bicolor ","class-V histone methyltransferase *(Suv) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.003G313400.1","No alias","Sorghum bicolor ","MyoB class-I myosin receptor","protein_coding"
"Sobic.003G320600.1","No alias","Sorghum bicolor ","transport protein *(TSUP)","protein_coding"
"Sobic.003G357500.1","No alias","Sorghum bicolor ","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Sobic.003G366300.1","No alias","Sorghum bicolor ","NEK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G387600.1","No alias","Sorghum bicolor ","component *(CAF1a/FAS1) of CAF1 histone chaperone complex","protein_coding"
"Sobic.003G407300.1","No alias","Sorghum bicolor ","receptor protein *(AHK)","protein_coding"
"Sobic.003G411700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G013500.1","No alias","Sorghum bicolor ","cytosolic UDP-glucose pyrophosphorylase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G034400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G058600.1","No alias","Sorghum bicolor ","NAD-dependent succinic semialdehyde dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.004G079000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G081800.1","No alias","Sorghum bicolor ","ubiquitin-proteasome shuttle factor *(DDI1)","protein_coding"
"Sobic.004G113400.1","No alias","Sorghum bicolor ","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"Sobic.004G117800.1","No alias","Sorghum bicolor ","component *(VPS29) of Retromer protein recycling complex","protein_coding"
"Sobic.004G143700.1","No alias","Sorghum bicolor ","clade E phosphatase","protein_coding"
"Sobic.004G166400.1","No alias","Sorghum bicolor ","regulatory protein *(IF1) of ATP synthase activity","protein_coding"
"Sobic.004G174800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G191500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G200000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G228100.2","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding"
"Sobic.004G241400.1","No alias","Sorghum bicolor ","co-factor of RBX1 activity *(DCN1) in CULLIN-based ubiquitylation complexes","protein_coding"
"Sobic.004G247400.1","No alias","Sorghum bicolor ","Caleosin-type peroxygenase","protein_coding"
"Sobic.004G264700.1","No alias","Sorghum bicolor ","subunit delta *(OSCP) of ATP synthase peripheral MF1 subcomplex","protein_coding"
"Sobic.004G274400.1","No alias","Sorghum bicolor ","N-terminal acetylase *(NatF/NAA60)","protein_coding"
"Sobic.004G302900.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.004G317100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G321400.1","No alias","Sorghum bicolor ","chromatin stabilizing factor *(TSK)","protein_coding"
"Sobic.004G331600.1","No alias","Sorghum bicolor ","component *(MCM5) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.004G338500.1","No alias","Sorghum bicolor ","histone demethylase *(PKDM7)","protein_coding"
"Sobic.004G355500.1","No alias","Sorghum bicolor ","component *(RPA2) of RPA presynaptic filament assembly factor complex & component *(RPA2) of single-stranded-DNA binding RPA complex","protein_coding"
"Sobic.005G024400.1","No alias","Sorghum bicolor ","substrate adaptor *(HTD1/DWD1) of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Sobic.005G110523.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G110535.1","No alias","Sorghum bicolor ","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.005G157300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G169400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G009900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G029300.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5)","protein_coding"
"Sobic.006G043700.1","No alias","Sorghum bicolor ","ketoacyl-ACP reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.006G051000.3","No alias","Sorghum bicolor ","primase component *(POLA3) of DNA polymerase alpha complex","protein_coding"
"Sobic.006G056000.1","No alias","Sorghum bicolor ","substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)","protein_coding"
"Sobic.006G095000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G118700.1","No alias","Sorghum bicolor ","telomeric dsDNA-binding protein","protein_coding"
"Sobic.006G138400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G152600.1","No alias","Sorghum bicolor ","iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)","protein_coding"
"Sobic.006G182700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G184300.1","No alias","Sorghum bicolor ","substrate adaptor of SCF E3 ubiquitin ligase complex","protein_coding"
"Sobic.006G188600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G196200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G196500.1","No alias","Sorghum bicolor ","modification writer component *(RING1) of modification writer protein components","protein_coding"
"Sobic.006G198500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G200000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G208300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G213100.1","No alias","Sorghum bicolor ","UDP-N-acetylglucosamine pyrophosphorylase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G214000.1","No alias","Sorghum bicolor ","DNA chromomethylase *(CMT)","protein_coding"
"Sobic.006G255600.1","No alias","Sorghum bicolor ","cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2 glycosylase","protein_coding"
"Sobic.006G256200.5","No alias","Sorghum bicolor ","GARP subgroup PHL transcription factor","protein_coding"
"Sobic.006G258500.1","No alias","Sorghum bicolor ","phosphatidylinositol 4-kinase *(PI4K-gamma)","protein_coding"
"Sobic.006G262900.1","No alias","Sorghum bicolor ","component *(Pex22) of receptor monoubiquitination system","protein_coding"
"Sobic.007G000500.1","No alias","Sorghum bicolor ","DNA bending architectural protein *(HMG-B)","protein_coding"
"Sobic.007G002200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G008300.1","No alias","Sorghum bicolor ","component *(CAF1b/FAS2) of CAF1 histone chaperone complex","protein_coding"
"Sobic.007G023700.1","No alias","Sorghum bicolor ","TOR-dependent regulatory protein *(MRF) of protein translation","protein_coding"
"Sobic.007G030800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G071100.1","No alias","Sorghum bicolor ","cold-responsive protein kinase *(CRPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.007G089300.1","No alias","Sorghum bicolor ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.007G091900.1","No alias","Sorghum bicolor ","RLCK-VI receptor-like protein kinase & interactive protein kinase of ROP-GTPase activity *(RBK/RRK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.007G112100.1","No alias","Sorghum bicolor ","enoyl-ACP reductase","protein_coding"
"Sobic.007G130600.1","No alias","Sorghum bicolor ","subunit beta of methylcrotonoyl-CoA carboxylase complex","protein_coding"
"Sobic.007G150700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G159450.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G168400.1","No alias","Sorghum bicolor ","regulatory protein *(IF1) of ATP synthase activity","protein_coding"
"Sobic.007G187700.1","No alias","Sorghum bicolor ","regulatory protein (RBR) of cell cycle interphase","protein_coding"
"Sobic.008G026200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G050200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G062000.1","No alias","Sorghum bicolor ","proteasome assembly chaperone PAC4","protein_coding"
"Sobic.008G086200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G096100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G129200.1","No alias","Sorghum bicolor ","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.008G156600.1","No alias","Sorghum bicolor ","substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase complex & regulatory protein *(FBL17) of cell cycle","protein_coding"
"Sobic.008G188800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G000400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G045100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G054700.1","No alias","Sorghum bicolor ","component *(GID9) of GID ubiquitination complex","protein_coding"
"Sobic.009G076900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G087000.1","No alias","Sorghum bicolor ","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.009G109300.1","No alias","Sorghum bicolor ","primase component *(POLA4) of DNA polymerase alpha complex","protein_coding"
"Sobic.009G117500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G117900.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G137700.1","No alias","Sorghum bicolor ","isopentenyl diphosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Sobic.009G159200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G166300.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(UPL3)","protein_coding"
"Sobic.009G172950.1","No alias","Sorghum bicolor ","component *(MCM3) of MCM replicative DNA helicase complex","protein_coding"
"Sobic.009G218700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G233700.1","No alias","Sorghum bicolor ","urease accessory protein *(UreG)","protein_coding"
"Sobic.009G241500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G013100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G026100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G028700.2","No alias","Sorghum bicolor ","RNA editing factor *(COD1)","protein_coding"
"Sobic.010G038200.1","No alias","Sorghum bicolor ","helicase auxiliary factor *(CDT1)","protein_coding"
"Sobic.010G062900.1","No alias","Sorghum bicolor ","hydroxyproline-O-arabinosyltransferase *(HPAT) & hydroxyproline beta-1,4-arabinosyltransferase *(HPAT)","protein_coding"
"Sobic.010G067500.1","No alias","Sorghum bicolor ","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.010G069300.2","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.010G103700.2","No alias","Sorghum bicolor ","replication fork tethering component *(POLA2) of DNA polymerase alpha complex","protein_coding"
"Sobic.010G130200.1","No alias","Sorghum bicolor ","lipopolysaccharide-binding protein *(LBR) involved in bacterial elicitor response","protein_coding"
"Sobic.010G147700.1","No alias","Sorghum bicolor ","regulatory protein ELP1 of PRC1 histone mono-ubiquitination complex","protein_coding"
"Sobic.010G158100.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G174900.1","No alias","Sorghum bicolor ","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G200700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G203200.1","No alias","Sorghum bicolor ","MLK-II protein kinase & regulatory kinase component *(KOG1) of outer envelope TOC translocation system & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G232700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G245100.1","No alias","Sorghum bicolor ","L-lectin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G270300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g006240","No alias","Solanum lycopersicum","Mannose-binding lectin superfamily protein (AHRD V3.3 *** AT1G05760.2)","protein_coding"
"Solyc01g007930","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** AT1G70590.1)","protein_coding"
"Solyc01g080090","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g088060","No alias","Solanum lycopersicum","Nbs-lrr resistance protein, putative (AHRD V3.3 *** A0A061FEU3_THECC)","protein_coding"
"Solyc01g088220","No alias","Solanum lycopersicum","Aldehyde oxidase (AHRD V3.3 *-* Q9FV23_SOLLC)","protein_coding"
"Solyc01g095520","No alias","Solanum lycopersicum","Arabinogalactan peptide-like protein (AHRD V3.3 *** G7J699_MEDTR)","protein_coding"
"Solyc02g061830","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g083040","No alias","Solanum lycopersicum","LOW QUALITY:DUF241 domain protein (AHRD V3.3 *** G7LA86_MEDTR)","protein_coding"
"Solyc02g085380","No alias","Solanum lycopersicum","Like-COV protein (AHRD V3.3 *** G7L895_MEDTR)","protein_coding"
"Solyc02g087800","No alias","Solanum lycopersicum","Aldose 1-epimerase (AHRD V3.3 *** K4BBT6_SOLLC)","protein_coding"
"Solyc03g044880","No alias","Solanum lycopersicum","Exostosin family protein (AHRD V3.3 *** AT1G67410.1)","protein_coding"
"Solyc03g071560","No alias","Solanum lycopersicum","Glycine-rich RNA-binding family protein (AHRD V3.3 *** B9HUL0_POPTR)","protein_coding"
"Solyc03g096790","No alias","Solanum lycopersicum","autophagy-related protein 13","protein_coding"
"Solyc03g096880","No alias","Solanum lycopersicum","Tudor/PWWP/MBT superfamily protein (AHRD V3.3 *** A0A0K9NN30_ZOSMR)","protein_coding"
"Solyc03g098690","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g118760","No alias","Solanum lycopersicum","Tubulin beta chain (AHRD V3.3 *** TBB_HORVU)","protein_coding"
"Solyc03g119350","No alias","Solanum lycopersicum","peptidase M50B-like protein (AHRD V3.3 *-* AT1G67060.1)","protein_coding"
"Solyc03g119890","No alias","Solanum lycopersicum","F-box/RNI/FBD-like domain protein (AHRD V3.3 *** G7IHX4_MEDTR)","protein_coding"
"Solyc03g123940","No alias","Solanum lycopersicum","60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI)","protein_coding"
"Solyc04g014380","No alias","Solanum lycopersicum","Kinase interacting (KIP1-like) family protein (AHRD V3.3 *** AT1G09720.1)","protein_coding"
"Solyc04g076920","No alias","Solanum lycopersicum","beta3-glucuronyltransferase","protein_coding"
"Solyc04g082090","No alias","Solanum lycopersicum","Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC)","protein_coding"
"Solyc05g051560","No alias","Solanum lycopersicum","Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G64970.1)","protein_coding"
"Solyc06g060160","No alias","Solanum lycopersicum","U-box domain-containing protein 13 (AHRD V3.3 *** W9R751_9ROSA)","protein_coding"
"Solyc06g065340","No alias","Solanum lycopersicum","LOW QUALITY:Ca(2+)-dependent nuclease family protein (AHRD V3.3 --* AT2G40410.2)","protein_coding"
"Solyc06g074740","No alias","Solanum lycopersicum","LEU86662  VPS41","protein_coding"
"Solyc07g006020","No alias","Solanum lycopersicum","ADIPOR-like receptor (AHRD V3.3 *** W9QY38_9ROSA)","protein_coding"
"Solyc08g067570","No alias","Solanum lycopersicum","LOW QUALITY:CW-type Zinc Finger (AHRD V3.3 *-* AT3G62900.3)","protein_coding"
"Solyc08g068830","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g078000","No alias","Solanum lycopersicum","Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA)","protein_coding"
"Solyc08g078120","No alias","Solanum lycopersicum","RING/FYVE/PHD zinc finger protein, putative (AHRD V3.3 *-* A0A072VQ30_MEDTR)","protein_coding"
"Solyc08g078740","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g081090","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g005950","No alias","Solanum lycopersicum","BTB/POZ domain-containing protein (AHRD V3.3 *** A0A061DRF8_THECC)","protein_coding"
"Solyc11g006750","No alias","Solanum lycopersicum","F1F0-ATPase inhibitor protein (AHRD V3.3 *** AT5G04750.1)","protein_coding"
"Solyc11g045050","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g069230","No alias","Solanum lycopersicum","Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO)","protein_coding"
"Solyc12g019090","No alias","Solanum lycopersicum","LOW QUALITY:Serine/threonine protein phosphatase 7 long form isogeny (AHRD V3.3 *-* A0A151RA30_CAJCA)","protein_coding"
"Solyc12g098970","No alias","Solanum lycopersicum","No description available","protein_coding"
"Sopen05g033690","No alias","Solanum pennellii","Mitochondrial ATPase inhibitor, IATP","protein_coding"
"Sopen06g023780","No alias","Solanum pennellii","Protein phosphatase inhibitor","protein_coding"
"Sopen11g017320","No alias","Solanum pennellii","MCM2/3/5 family","protein_coding"