"sequence_id","alias","species","description","type"
"100519","No alias","Selaginella moellendorffii ","Regulator of chromosome condensation (RCC1) family protein","protein_coding"
"115678","No alias","Selaginella moellendorffii ","peroxisome 1","protein_coding"
"122498","No alias","Selaginella moellendorffii ","Radical SAM superfamily protein","protein_coding"
"125041","No alias","Selaginella moellendorffii ","N-acetyl-l-glutamate synthase 1","protein_coding"
"150233","No alias","Selaginella moellendorffii ","electron-transfer flavoprotein:ubiquinone oxidoreductase","protein_coding"
"272178","No alias","Selaginella moellendorffii ","myb-like transcription factor family protein","protein_coding"
"404637","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406818","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418417","No alias","Selaginella moellendorffii ","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"426137","No alias","Selaginella moellendorffii ","zinc knuckle (CCHC-type) family protein","protein_coding"
"427056","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428856","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"438825","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"441625","No alias","Selaginella moellendorffii ","Cell division control, Cdc6","protein_coding"
"444132","No alias","Selaginella moellendorffii ","nuclear pore anchor","protein_coding"
"75008","No alias","Selaginella moellendorffii ","Pseudouridine synthase family protein","protein_coding"
"79357","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"81029","No alias","Selaginella moellendorffii ","Vacuolar sorting protein 9 (VPS9) domain","protein_coding"
"95956","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"99295","No alias","Selaginella moellendorffii ","ABC transporter 1","protein_coding"
"99745","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"A4A49_25467","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_30532","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"AC205274.3_FG001","No alias","Zea mays","pathogenesis-related gene 1","protein_coding"
"AC213398.3_FG007","No alias","Zea mays","Function unknown","protein_coding"
"At1g03220","No alias","Arabidopsis thaliana","Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]","protein_coding"
"At1g04410","No alias","Arabidopsis thaliana","Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178W4H0]","protein_coding"
"At1g04620","No alias","Arabidopsis thaliana","7-hydroxymethyl chlorophyll a reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GS60]","protein_coding"
"At1g11350","No alias","Arabidopsis thaliana","G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ9]","protein_coding"
"At1g15690","No alias","Arabidopsis thaliana","VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]","protein_coding"
"At1g17600","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4I901]","protein_coding"
"At1g18170","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDY5]","protein_coding"
"At1g20340","No alias","Arabidopsis thaliana","Plastocyanin major isoform, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42699]","protein_coding"
"At1g21650","No alias","Arabidopsis thaliana","Protein translocase subunit SecA [Source:UniProtKB/TrEMBL;Acc:F4HY36]","protein_coding"
"At1g24210","No alias","Arabidopsis thaliana","At1g24210 [Source:UniProtKB/TrEMBL;Acc:Q8LCT6]","protein_coding"
"At1g24610","No alias","Arabidopsis thaliana","F21J9.27 [Source:UniProtKB/TrEMBL;Acc:Q9FYK3]","protein_coding"
"At1g24764","No alias","Arabidopsis thaliana","microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]","protein_coding"
"At1g25390","No alias","Arabidopsis thaliana","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6K9]","protein_coding"
"At1g26640","No alias","Arabidopsis thaliana","Isopentenyl phosphate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F7]","protein_coding"
"At1g27450","No alias","Arabidopsis thaliana","Adenine phosphoribosyl transferase 1 [Source:UniProtKB/TrEMBL;Acc:F4HSX1]","protein_coding"
"At1g31190","No alias","Arabidopsis thaliana","Phosphatase IMPL1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94F00]","protein_coding"
"At1g35220","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in  /.../cies: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). [Source:TAIR;Acc:AT1G35220]","protein_coding"
"At1g43560","No alias","Arabidopsis thaliana","Ty2 [Source:UniProtKB/TrEMBL;Acc:A0A178WFY2]","protein_coding"
"At1g54220","No alias","Arabidopsis thaliana","Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]","protein_coding"
"At1g66670","No alias","Arabidopsis thaliana","ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]","protein_coding"
"At1g67280","No alias","Arabidopsis thaliana","Probable lactoylglutathione lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W593]","protein_coding"
"At1g67720","No alias","Arabidopsis thaliana","Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI2]","protein_coding"
"At1g69935","No alias","Arabidopsis thaliana","Protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I3V6]","protein_coding"
"At1g72510","No alias","Arabidopsis thaliana","At1g72510 [Source:UniProtKB/TrEMBL;Acc:Q9C9E9]","protein_coding"
"At1g77370","No alias","Arabidopsis thaliana","Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]","protein_coding"
"At1g80290","No alias","Arabidopsis thaliana","Nucleotide-diphospho-sugar transferases superfamily protein [Source:TAIR;Acc:AT1G80290]","protein_coding"
"At2g05160","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ41]","protein_coding"
"At2g15530","No alias","Arabidopsis thaliana","RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIG9]","protein_coding"
"At2g19470","No alias","Arabidopsis thaliana","Casein kinase 1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP4]","protein_coding"
"At2g22660","No alias","Arabidopsis thaliana","Glycine-rich domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ47]","protein_coding"
"At2g25850","No alias","Arabidopsis thaliana","PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]","protein_coding"
"At2g37500","No alias","Arabidopsis thaliana","Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VUS6]","protein_coding"
"At2g39705","No alias","Arabidopsis thaliana","RTFL8 [Source:UniProtKB/TrEMBL;Acc:A0A178VQG8]","protein_coding"
"At2g41780","No alias","Arabidopsis thaliana","At2g41780 [Source:UniProtKB/TrEMBL;Acc:O22942]","protein_coding"
"At2g45850","No alias","Arabidopsis thaliana","AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]","protein_coding"
"At2g46110","No alias","Arabidopsis thaliana","3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O82357]","protein_coding"
"At2g47210","No alias","Arabidopsis thaliana","SWR1-complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZL6]","protein_coding"
"At2g47240","No alias","Arabidopsis thaliana","Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]","protein_coding"
"At2g47590","No alias","Arabidopsis thaliana","At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]","protein_coding"
"At3g01440","No alias","Arabidopsis thaliana","Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SGH4]","protein_coding"
"At3g02820","No alias","Arabidopsis thaliana","Zinc knuckle (CCHC-type) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR82]","protein_coding"
"At3g02900","No alias","Arabidopsis thaliana","Low-density receptor-like protein [Source:UniProtKB/TrEMBL;Acc:F4IYH7]","protein_coding"
"At3g03980","No alias","Arabidopsis thaliana","NADPH-dependent aldehyde reductase-like protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQR4]","protein_coding"
"At3g06580","No alias","Arabidopsis thaliana","Galactokinase [Source:UniProtKB/Swiss-Prot;Acc:Q9SEE5]","protein_coding"
"At3g09820","No alias","Arabidopsis thaliana","Adenosine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF85]","protein_coding"
"At3g10840","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A4IJ41]","protein_coding"
"At3g13560","No alias","Arabidopsis thaliana","Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]","protein_coding"
"At3g13910","No alias","Arabidopsis thaliana","Protein of unknown function (DUF3511) [Source:TAIR;Acc:AT3G13910]","protein_coding"
"At3g16250","No alias","Arabidopsis thaliana","Photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU21]","protein_coding"
"At3g17240","No alias","Arabidopsis thaliana","Dihydrolipoyl dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K2]","protein_coding"
"At3g18990","No alias","Arabidopsis thaliana","AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]","protein_coding"
"At3g21790","No alias","Arabidopsis thaliana","Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VG15]","protein_coding"
"At3g22630","No alias","Arabidopsis thaliana","Proteasome subunit beta type-2-A [Source:UniProtKB/Swiss-Prot;Acc:O23714]","protein_coding"
"At3g25130","No alias","Arabidopsis thaliana","Acidic leucine-rich nuclear phosphoprotein 32 family B protein [Source:UniProtKB/TrEMBL;Acc:Q9LSG4]","protein_coding"
"At3g26060","No alias","Arabidopsis thaliana","Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JBC9]","protein_coding"
"At3g27380","No alias","Arabidopsis thaliana","Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]","protein_coding"
"At3g49530","No alias","Arabidopsis thaliana","NAC domain-containing protein 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCK6]","protein_coding"
"At3g57450","No alias","Arabidopsis thaliana","At3g57450 [Source:UniProtKB/TrEMBL;Acc:Q9SCM7]","protein_coding"
"At3g60750","No alias","Arabidopsis thaliana","Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]","protein_coding"
"At3g61150","No alias","Arabidopsis thaliana","HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]","protein_coding"
"At3g62410","No alias","Arabidopsis thaliana","Calvin cycle protein CP12-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP9]","protein_coding"
"At4g02080","No alias","Arabidopsis thaliana","SAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]","protein_coding"
"At4g02610","No alias","Arabidopsis thaliana","Tryptophan synthase alpha chain [Source:UniProtKB/Swiss-Prot;Acc:O22765]","protein_coding"
"At4g03020","No alias","Arabidopsis thaliana","Putative WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q8LPI5]","protein_coding"
"At4g16510","No alias","Arabidopsis thaliana","YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q940I4]","protein_coding"
"At4g25880","No alias","Arabidopsis thaliana","pumilio 6 [Source:TAIR;Acc:AT4G25880]","protein_coding"
"At4g27780","No alias","Arabidopsis thaliana","AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]","protein_coding"
"At4g28220","No alias","Arabidopsis thaliana","External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]","protein_coding"
"At5g02710","No alias","Arabidopsis thaliana","At5g02710 [Source:UniProtKB/TrEMBL;Acc:Q9LZ14]","protein_coding"
"At5g03430","No alias","Arabidopsis thaliana","Phosphoadenosine phosphosulfate (PAPS) reductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZE4]","protein_coding"
"At5g04710","No alias","Arabidopsis thaliana","Aspartyl aminopeptidase [Source:UniProtKB/TrEMBL;Acc:Q9LZ26]","protein_coding"
"At5g07860","No alias","Arabidopsis thaliana","HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD98]","protein_coding"
"At5g13240","No alias","Arabidopsis thaliana","transcription regulators [Source:TAIR;Acc:AT5G13240]","protein_coding"
"At5g18040","No alias","Arabidopsis thaliana","Protein HEAT-INDUCED TAS1 TARGET 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJF8]","protein_coding"
"At5g20090","No alias","Arabidopsis thaliana","Mitochondrial pyruvate carrier [Source:UniProtKB/TrEMBL;Acc:A0A178UR79]","protein_coding"
"At5g20935","No alias","Arabidopsis thaliana","unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G20935]","protein_coding"
"At5g43060","No alias","Arabidopsis thaliana","Probable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]","protein_coding"
"At5g43830","No alias","Arabidopsis thaliana","Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]","protein_coding"
"At5g47070","No alias","Arabidopsis thaliana","Probable serine/threonine-protein kinase PBL19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC0]","protein_coding"
"At5g49330","No alias","Arabidopsis thaliana","Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]","protein_coding"
"At5g51350","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGN6]","protein_coding"
"At5g51560","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FHM8]","protein_coding"
"At5g56340","No alias","Arabidopsis thaliana","RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FM98]","protein_coding"
"At5g58030","No alias","Arabidopsis thaliana","At5g58030 [Source:UniProtKB/TrEMBL;Acc:Q9FGU1]","protein_coding"
"At5g58310","No alias","Arabidopsis thaliana","Methylesterase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL9]","protein_coding"
"At5g59550","No alias","Arabidopsis thaliana","zinc finger (C3HC4-type RING finger) family protein [Source:TAIR;Acc:AT5G59550]","protein_coding"
"At5g62810","No alias","Arabidopsis thaliana","Peroxisomal membrane protein PEX14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXT6]","protein_coding"
"At5g63420","No alias","Arabidopsis thaliana","Ribonuclease J [Source:UniProtKB/Swiss-Prot;Acc:Q84W56]","protein_coding"
"At5g65070","No alias","Arabidopsis thaliana","K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4KGH9]","protein_coding"
"At5g65760","No alias","Arabidopsis thaliana","At5g65760 [Source:UniProtKB/TrEMBL;Acc:Q1JPM1]","protein_coding"
"At5g66050","No alias","Arabidopsis thaliana","Wound-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWL4]","protein_coding"
"Bradi1g02490","No alias","Brachypodium distachyon","nicotinate phosphoribosyltransferase 2","protein_coding"
"Bradi1g03580","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Bradi1g07150","No alias","Brachypodium distachyon","Alpha-helical ferredoxin","protein_coding"
"Bradi1g07457","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding"
"Bradi1g09357","No alias","Brachypodium distachyon","proton gradient regulation 3","protein_coding"
"Bradi1g09847","No alias","Brachypodium distachyon","BSD domain-containing protein","protein_coding"
"Bradi1g10007","No alias","Brachypodium distachyon","GTP-binding protein, HflX","protein_coding"
"Bradi1g11365","No alias","Brachypodium distachyon","TFIIB zinc-binding protein","protein_coding"
"Bradi1g11530","No alias","Brachypodium distachyon","Phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding"
"Bradi1g13930","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g23250","No alias","Brachypodium distachyon","Mo25 family protein","protein_coding"
"Bradi1g23560","No alias","Brachypodium distachyon","5-formyltetrahydrofolate cycloligase","protein_coding"
"Bradi1g25370","No alias","Brachypodium distachyon","GRAS family transcription factor","protein_coding"
"Bradi1g26590","No alias","Brachypodium distachyon","SH3 domain-containing protein","protein_coding"
"Bradi1g29240","No alias","Brachypodium distachyon","Tetraspanin family protein","protein_coding"
"Bradi1g29530","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi1g31570","No alias","Brachypodium distachyon","ubiquitin-conjugating enzyme 22","protein_coding"
"Bradi1g32480","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi1g33510","No alias","Brachypodium distachyon","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Bradi1g35070","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g42660","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g47590","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g51720","No alias","Brachypodium distachyon","Phosphorylase superfamily protein","protein_coding"
"Bradi1g54037","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g54400","No alias","Brachypodium distachyon","transcription regulators","protein_coding"
"Bradi1g55030","No alias","Brachypodium distachyon","FAD-linked oxidases family protein","protein_coding"
"Bradi1g60207","No alias","Brachypodium distachyon","inter-alpha-trypsin inhibitor heavy chain-related","protein_coding"
"Bradi1g62030","No alias","Brachypodium distachyon","Rho GTPase activation protein (RhoGAP) with PH domain","protein_coding"
"Bradi1g65360","No alias","Brachypodium distachyon","Sec1/munc18-like (SM) proteins superfamily","protein_coding"
"Bradi1g65920","No alias","Brachypodium distachyon","elongator protein 6","protein_coding"
"Bradi1g66240","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g68830","No alias","Brachypodium distachyon","peptide transporter 2","protein_coding"
"Bradi1g69150","No alias","Brachypodium distachyon","homeobox from Arabidopsis thaliana","protein_coding"
"Bradi1g73210","No alias","Brachypodium distachyon","protein kinase 2B","protein_coding"
"Bradi1g77080","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g77830","No alias","Brachypodium distachyon","peroxin 3","protein_coding"
"Bradi2g02687","No alias","Brachypodium distachyon","transcription regulators","protein_coding"
"Bradi2g04197","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi2g05350","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g05520","No alias","Brachypodium distachyon","PAS/LOV protein B","protein_coding"
"Bradi2g05590","No alias","Brachypodium distachyon","myb-like transcription factor family protein","protein_coding"
"Bradi2g07284","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g13450","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi2g13487","No alias","Brachypodium distachyon","Cyclin family protein","protein_coding"
"Bradi2g16420","No alias","Brachypodium distachyon","Cytochrome b561/ferric reductase transmembrane protein family","protein_coding"
"Bradi2g18250","No alias","Brachypodium distachyon","myb-like transcription factor family protein","protein_coding"
"Bradi2g18670","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding"
"Bradi2g20020","No alias","Brachypodium distachyon","Protein of unknown function (DUF803)","protein_coding"
"Bradi2g25640","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g25950","No alias","Brachypodium distachyon","cobalt ion transmembrane transporters","protein_coding"
"Bradi2g29960","No alias","Brachypodium distachyon","Integrase-type DNA-binding superfamily protein","protein_coding"
"Bradi2g31150","No alias","Brachypodium distachyon","VIRB2-interacting protein 1","protein_coding"
"Bradi2g33070","No alias","Brachypodium distachyon","atypical CYS  HIS rich thioredoxin 2","protein_coding"
"Bradi2g33180","No alias","Brachypodium distachyon","membrane bound O-acyl transferase (MBOAT) family protein","protein_coding"
"Bradi2g36430","No alias","Brachypodium distachyon","SIGNAL PEPTIDE PEPTIDASE-LIKE 3","protein_coding"
"Bradi2g38470","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g44450","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding"
"Bradi2g46085","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g46970","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g47300","No alias","Brachypodium distachyon","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Bradi2g47850","No alias","Brachypodium distachyon","casein kinase 1-like protein 2","protein_coding"
"Bradi2g48260","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g49291","No alias","Brachypodium distachyon","Insulinase (Peptidase family M16) protein","protein_coding"
"Bradi2g49800","No alias","Brachypodium distachyon","MAC/Perforin domain-containing protein","protein_coding"
"Bradi2g50810","No alias","Brachypodium distachyon","uvrB/uvrC motif-containing protein","protein_coding"
"Bradi2g53289","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g54460","No alias","Brachypodium distachyon","RAB GTPase homolog 8","protein_coding"
"Bradi2g56070","No alias","Brachypodium distachyon","tubby like protein 10","protein_coding"
"Bradi2g56880","No alias","Brachypodium distachyon","plastid transcriptionally active 4","protein_coding"
"Bradi2g60240","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g00767","No alias","Brachypodium distachyon","Uncharacterised conserved protein UCP022280","protein_coding"
"Bradi3g02220","No alias","Brachypodium distachyon","ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6","protein_coding"
"Bradi3g02890","No alias","Brachypodium distachyon","copper ion binding;cobalt ion binding;zinc ion binding","protein_coding"
"Bradi3g05210","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g06193","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g08090","No alias","Brachypodium distachyon","protein phosphatase 2A-2","protein_coding"
"Bradi3g09460","No alias","Brachypodium distachyon","global transcription factor group E4","protein_coding"
"Bradi3g11450","No alias","Brachypodium distachyon","negative regulator of systemic acquired resistance (SNI1)","protein_coding"
"Bradi3g16000","No alias","Brachypodium distachyon","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Bradi3g18330","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g19842","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g19850","No alias","Brachypodium distachyon","adenylate kinase family protein","protein_coding"
"Bradi3g20460","No alias","Brachypodium distachyon","poly(A) binding protein 2","protein_coding"
"Bradi3g22750","No alias","Brachypodium distachyon","compromised recognition of TCV 1","protein_coding"
"Bradi3g23060","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g27950","No alias","Brachypodium distachyon","Inosine triphosphate pyrophosphatase family protein","protein_coding"
"Bradi3g29300","No alias","Brachypodium distachyon","Metal-dependent phosphohydrolase","protein_coding"
"Bradi3g30390","No alias","Brachypodium distachyon","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Bradi3g30810","No alias","Brachypodium distachyon","methionine aminopeptidase 1A","protein_coding"
"Bradi3g32267","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g35840","No alias","Brachypodium distachyon","cytochrome P450, family 87, subfamily A, polypeptide 2","protein_coding"
"Bradi3g35990","No alias","Brachypodium distachyon","cytochrome P450, family 76, subfamily C, polypeptide 1","protein_coding"
"Bradi3g37385","No alias","Brachypodium distachyon","ARID/BRIGHT DNA-binding domain-containing protein","protein_coding"
"Bradi3g42470","No alias","Brachypodium distachyon","Arabidopsis protein of unknown function (DUF241)","protein_coding"
"Bradi3g43920","No alias","Brachypodium distachyon","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding"
"Bradi3g46060","No alias","Brachypodium distachyon","Calmodulin-binding protein","protein_coding"
"Bradi3g46595","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g47760","No alias","Brachypodium distachyon","vacuolar protein sorting-associated protein 20.2","protein_coding"
"Bradi3g49100","No alias","Brachypodium distachyon","casein kinase I","protein_coding"
"Bradi3g51389","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi3g52980","No alias","Brachypodium distachyon","histidinol phosphate aminotransferase 1","protein_coding"
"Bradi3g55565","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g55820","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g57260","No alias","Brachypodium distachyon","DENN (AEX-3) domain-containing protein","protein_coding"
"Bradi3g58790","No alias","Brachypodium distachyon","Ribonuclease II/R family protein","protein_coding"
"Bradi3g59030","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Bradi3g60160","No alias","Brachypodium distachyon","lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme","protein_coding"
"Bradi4g02810","No alias","Brachypodium distachyon","Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein","protein_coding"
"Bradi4g02825","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi4g04540","No alias","Brachypodium distachyon","prefoldin 3","protein_coding"
"Bradi4g05100","No alias","Brachypodium distachyon","Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3","protein_coding"
"Bradi4g06950","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g07810","No alias","Brachypodium distachyon","thymidylate synthase 1","protein_coding"
"Bradi4g14721","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g16467","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19650","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi4g21890","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi4g24712","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g24852","No alias","Brachypodium distachyon","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Bradi4g32787","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g35170","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g36800","No alias","Brachypodium distachyon","phospholipase D delta","protein_coding"
"Bradi4g38855","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g39050","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi4g43070","No alias","Brachypodium distachyon","L-galactono-1,4-lactone dehydrogenase","protein_coding"
"Bradi4g45390","No alias","Brachypodium distachyon","Ubiquitin-like superfamily protein","protein_coding"
"Bradi5g01220","No alias","Brachypodium distachyon","AAR2 protein family","protein_coding"
"Bradi5g07210","No alias","Brachypodium distachyon","Ubiquitin-conjugating enzyme family protein","protein_coding"
"Bradi5g07220","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi5g07880","No alias","Brachypodium distachyon","Phosphoenolpyruvate carboxylase family protein","protein_coding"
"Bradi5g10310","No alias","Brachypodium distachyon","Formyl transferase","protein_coding"
"Bradi5g10570","No alias","Brachypodium distachyon","Glutathione S-transferase family protein","protein_coding"
"Bradi5g12590","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g14980","No alias","Brachypodium distachyon","poly(A) binding protein 8","protein_coding"
"Bradi5g16780","No alias","Brachypodium distachyon","Serine protease inhibitor (SERPIN) family protein","protein_coding"
"Bradi5g17860","No alias","Brachypodium distachyon","serine carboxypeptidase-like 19","protein_coding"
"Bradi5g18080","No alias","Brachypodium distachyon","Acyl-CoA thioesterase family protein","protein_coding"
"Bradi5g20230","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g20570","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g22007","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi5g23320","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g24460","No alias","Brachypodium distachyon","Calmodulin-binding protein","protein_coding"
"Bradi5g24590","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Brara.A00033.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00216.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01116.1","No alias","Brassica rapa","component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Brara.A01341.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01622.1","No alias","Brassica rapa","arginine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Brara.A01655.1","No alias","Brassica rapa","glutamate-tRNA ligase","protein_coding"
"Brara.A01902.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02200.1","No alias","Brassica rapa","component *(uS17) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.A02431.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02688.1","No alias","Brassica rapa","pyruvate kinase & plastidial pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A02877.1","No alias","Brassica rapa","regulatory protein of RNA homeostasis","protein_coding"
"Brara.A03743.1","No alias","Brassica rapa","component *(eS24) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.A03857.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03880.1","No alias","Brassica rapa","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.B00384.1","No alias","Brassica rapa","chorismate mutase & EC_5.4 intramolecular transferase","protein_coding"
"Brara.B00441.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00596.1","No alias","Brassica rapa","GASA precursor polypeptide","protein_coding"
"Brara.B00932.1","No alias","Brassica rapa","E3 ubiquitin ligase component *(NSE1) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Brara.B02306.1","No alias","Brassica rapa","substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.B03171.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03321.1","No alias","Brassica rapa","solute transporter *(UmamiT)","protein_coding"
"Brara.C00091.1","No alias","Brassica rapa","component *(uS12) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C00107.1","No alias","Brassica rapa","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.C00464.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00706.1","No alias","Brassica rapa","subunit zeta *(CCT6) of CCT chaperonin folding complex","protein_coding"
"Brara.C01366.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01818.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02331.1","No alias","Brassica rapa","component *(SDH8) of succinate dehydrogenase complex","protein_coding"
"Brara.C02358.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(CYP21-3) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.C02916.1","No alias","Brassica rapa","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"Brara.C02920.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03756.1","No alias","Brassica rapa","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.C04055.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04088.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00008.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.D00054.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00292.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00485.1","No alias","Brassica rapa","CDKB protein kinase & catalytic component *(CDKB) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D00794.1","No alias","Brassica rapa","component *(SLDP) of lipid droplet-plasma membrane tethering complex","protein_coding"
"Brara.D01021.1","No alias","Brassica rapa","component *(NRP-ABCDE6) of RNA polymerase complexes","protein_coding"
"Brara.D01042.1","No alias","Brassica rapa","regulatory protein *(MINIYO) of RNA polymerase","protein_coding"
"Brara.D01100.1","No alias","Brassica rapa","mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex","protein_coding"
"Brara.D01287.1","No alias","Brassica rapa","sphingolipid fatty acid 2-hydroxylase","protein_coding"
"Brara.D01707.1","No alias","Brassica rapa","component *(NOT4) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Brara.D01933.1","No alias","Brassica rapa","poly(ADP-ribose) glycohydrolase *(PARG)","protein_coding"
"Brara.D02077.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02199.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02343.1","No alias","Brassica rapa","alanine aminotransferase *(PYD4) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Brara.D02835.1","No alias","Brassica rapa","recruitment factor of SWR1 chromatin remodeling complex *(SWC4) & component *(SWC4) shared with NuA4/SWR1 complexes","protein_coding"
"Brara.E00067.1","No alias","Brassica rapa","recruitment factor of SWR1 chromatin remodeling complex *(SWC4) & component *(SWC4) shared with NuA4/SWR1 complexes","protein_coding"
"Brara.E01712.1","No alias","Brassica rapa","A1-class (Pepsin) protease & aspartyl protease (APCB) of BAG6-dependent plant immunity","protein_coding"
"Brara.E01835.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02168.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02380.1","No alias","Brassica rapa","component *(RACK1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E02574.1","No alias","Brassica rapa","glutaredoxin maturation factor (GRXS15) of iron-sulfur cluster assembly machinery","protein_coding"
"Brara.E03342.1","No alias","Brassica rapa","component *(SNU23) of U4/U6.U5 tri-snRNP complex","protein_coding"
"Brara.E03381.1","No alias","Brassica rapa","RNA editing factor *(MEF19)","protein_coding"
"Brara.E03418.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03461.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding"
"Brara.E03557.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00620.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00786.1","No alias","Brassica rapa","beta-1,3-galactosyltransferase *(B3GALT)","protein_coding"
"Brara.F01071.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.F01459.1","No alias","Brassica rapa","OPC-8","protein_coding"
"Brara.F01462.1","No alias","Brassica rapa","substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin ligase complex","protein_coding"
"Brara.F01551.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01718.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02325.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02428.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02594.1","No alias","Brassica rapa","regulatory protein *(SFT2) of COPII coatomer machinery","protein_coding"
"Brara.F02902.1","No alias","Brassica rapa","chromatin architectural modulator *(PNET)","protein_coding"
"Brara.F03166.1","No alias","Brassica rapa","DNA repair endonuclease *(XPG)","protein_coding"
"Brara.F03311.1","No alias","Brassica rapa","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Brara.F03628.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03789.1","No alias","Brassica rapa","ATP sulfurylase *(APS) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G00318.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00458.1","No alias","Brassica rapa","enoyl-ACP reductase","protein_coding"
"Brara.G00538.1","No alias","Brassica rapa","component *(eL42) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G00603.1","No alias","Brassica rapa","small subunit of ribonucleoside-diphosphate reductase heterodimer","protein_coding"
"Brara.G00897.1","No alias","Brassica rapa","cyt-b561 electron shuttle hemoprotein *(CYBASC)","protein_coding"
"Brara.G01608.1","No alias","Brassica rapa","component *(eL36) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G01983.1","No alias","Brassica rapa","UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.G02232.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02465.1","No alias","Brassica rapa","component *(uL16) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G02767.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02801.1","No alias","Brassica rapa","G-protein-coupled receptor-like regulator (7TM)","protein_coding"
"Brara.G03502.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00756.1","No alias","Brassica rapa","Qc-type Bs14-group component of SNARE membrane fusion complex","protein_coding"
"Brara.H01541.1","No alias","Brassica rapa","nucleotide exchange factor *(MGE)","protein_coding"
"Brara.H01667.1","No alias","Brassica rapa","E3 ubiquitin ligase","protein_coding"
"Brara.H02441.1","No alias","Brassica rapa","CDKD/CDK7 protein kinase & catalytic kinase component *(CDKD) of CAK kinase module & catalytic component *(CDKD) of cyclin-dependent kinase complex & catalytic kinase component *(CDKD) of CAK kinase module & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H02450.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02561.1","No alias","Brassica rapa","E3 ubiquitin ligase *(SPL)","protein_coding"
"Brara.H02564.1","No alias","Brassica rapa","component *(SF3A1) of splicing factor 3A complex","protein_coding"
"Brara.H02742.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02778.1","No alias","Brassica rapa","transcriptional repressor *(NF-X1)","protein_coding"
"Brara.H02872.1","No alias","Brassica rapa","transcription factor *(YABBY)","protein_coding"
"Brara.H03058.1","No alias","Brassica rapa","component *(uS19) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.H03086.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00053.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01087.1","No alias","Brassica rapa","large subunit of U2AF pre-RNA splicing auxiliary factor complex","protein_coding"
"Brara.I01133.1","No alias","Brassica rapa","component *(eL28) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I01227.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01233.1","No alias","Brassica rapa","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Brara.I01320.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01725.1","No alias","Brassica rapa","E3 ubiquitin ligase *(PUB15)","protein_coding"
"Brara.I01925.1","No alias","Brassica rapa","ketoacyl-ACP synthase I","protein_coding"
"Brara.I02189.1","No alias","Brassica rapa","EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & allantoinase *(ALN)","protein_coding"
"Brara.I02303.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02307.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02419.1","No alias","Brassica rapa","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Brara.I02595.1","No alias","Brassica rapa","unfoldase component *(ClpX) of mitochondrion Clp-type protease complex","protein_coding"
"Brara.I02667.1","No alias","Brassica rapa","bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.I03203.1","No alias","Brassica rapa","large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex","protein_coding"
"Brara.I04203.1","No alias","Brassica rapa","component *(eS27) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I04317.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05236.1","No alias","Brassica rapa","P2A-type calcium cation-transporting ATPase *(ECA)","protein_coding"
"Brara.I05327.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00004.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00475.1","No alias","Brassica rapa","Nardilysin-like peptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.J00672.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00736.1","No alias","Brassica rapa","regulatory protein *(RAR1) of effector-triggered immunity","protein_coding"
"Brara.J01458.1","No alias","Brassica rapa","HD2-type histone deacetylase *(HD2/HDT)","protein_coding"
"Brara.J02107.1","No alias","Brassica rapa","regulatory protein *(MAF1) of RNA polymerase III","protein_coding"
"Brara.J02545.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding"
"Brara.J02921.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00517.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00656.1","No alias","Brassica rapa","signal peptidase *(SPP)","protein_coding"
"Brara.K00865.1","No alias","Brassica rapa","P2B-type calcium cation-transporting ATPase *(ACA)","protein_coding"
"Brara.K00929.1","No alias","Brassica rapa","UDP-D-glucose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"Brara.K00973.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RNF170)","protein_coding"
"Brara.K01752.1","No alias","Brassica rapa","component *(RPA1) of single-stranded-DNA binding RPA complex & component *(RPA1) of RPA presynaptic filament assembly factor complex","protein_coding"
"Cre01.g003700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g012100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g017100","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding"
"Cre01.g017450","No alias","Chlamydomonas reinhardtii","DNA polymerase alpha 2","protein_coding"
"Cre01.g022000","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre01.g022550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g023450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g027200","No alias","Chlamydomonas reinhardtii","ubiquitin-conjugating enzyme 5","protein_coding"
"Cre01.g029100","No alias","Chlamydomonas reinhardtii","PSF2","protein_coding"
"Cre01.g034750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g036050","No alias","Chlamydomonas reinhardtii","MUTL-homologue 1","protein_coding"
"Cre01.g036100","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre01.g036150","No alias","Chlamydomonas reinhardtii","Calcium-binding EF-hand family protein","protein_coding"
"Cre01.g037250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g043000","No alias","Chlamydomonas reinhardtii","Radical SAM superfamily protein","protein_coding"
"Cre01.g044900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g047218","No alias","Chlamydomonas reinhardtii","Uncharacterized conserved protein (DUF2358)","protein_coding"
"Cre01.g048200","No alias","Chlamydomonas reinhardtii","RNA helicase, putative","protein_coding"
"Cre01.g051850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g052950","No alias","Chlamydomonas reinhardtii","DNA repair metallo-beta-lactamase family protein","protein_coding"
"Cre01.g053250","No alias","Chlamydomonas reinhardtii","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Cre01.g055436","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g073450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g073600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g074511","No alias","Chlamydomonas reinhardtii","KH domain-containing protein","protein_coding"
"Cre02.g076625","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g084100","No alias","Chlamydomonas reinhardtii","RNI-like superfamily protein","protein_coding"
"Cre02.g088651","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g090350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g091900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g094350","No alias","Chlamydomonas reinhardtii","importin alpha isoform 6","protein_coding"
"Cre02.g095050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095075","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g096100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g100000","No alias","Chlamydomonas reinhardtii","Replication protein A, subunit RPA32","protein_coding"
"Cre02.g100100","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding"
"Cre02.g104300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g104951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g107400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g117175","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g119800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g142186","No alias","Chlamydomonas reinhardtii","Tubulin/FtsZ family protein","protein_coding"
"Cre02.g143547","No alias","Chlamydomonas reinhardtii","plant UBX domain-containing protein 2","protein_coding"
"Cre02.g143587","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g143600","No alias","Chlamydomonas reinhardtii","SAC3/GANP/Nin1/mts3/eIF-3 p25 family","protein_coding"
"Cre03.g149150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g158300","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding"
"Cre03.g158550","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Cre03.g161050","No alias","Chlamydomonas reinhardtii","partner of SLD five 1","protein_coding"
"Cre03.g163850","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre03.g166000","No alias","Chlamydomonas reinhardtii","Ankyrin repeat family protein","protein_coding"
"Cre03.g171900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g173500","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre03.g179961","No alias","Chlamydomonas reinhardtii","DNA polymerase epsilon catalytic subunit","protein_coding"
"Cre03.g180050","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre03.g181300","No alias","Chlamydomonas reinhardtii","RNA 3\'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta","protein_coding"
"Cre03.g184500","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre03.g185350","No alias","Chlamydomonas reinhardtii","callose synthase 5","protein_coding"
"Cre03.g187550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g189600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g191100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g193900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g197700","No alias","Chlamydomonas reinhardtii","trithorax-like protein 2","protein_coding"
"Cre03.g199350","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor18","protein_coding"
"Cre03.g200900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g202449","No alias","Chlamydomonas reinhardtii","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"Cre03.g204752","No alias","Chlamydomonas reinhardtii","mRNA capping enzyme family protein","protein_coding"
"Cre03.g208385","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g213050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g214350","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding"
"Cre04.g217944","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g217952","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g220950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g221350","No alias","Chlamydomonas reinhardtii","CD2-binding protein-related","protein_coding"
"Cre04.g226001","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g227000","No alias","Chlamydomonas reinhardtii","DNA mismatch repair protein, putative","protein_coding"
"Cre04.g228750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g233102","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234654","No alias","Chlamydomonas reinhardtii","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding"
"Cre05.g235750","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding"
"Cre06.g251951","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre06.g255800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g266250","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding"
"Cre06.g266850","No alias","Chlamydomonas reinhardtii","GATA transcription factor 19","protein_coding"
"Cre06.g266950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g267800","No alias","Chlamydomonas reinhardtii","manganese tracking factor for mitochondrial SOD2","protein_coding"
"Cre06.g278161","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278197","No alias","Chlamydomonas reinhardtii","Cysteine proteinases superfamily protein","protein_coding"
"Cre06.g278199","No alias","Chlamydomonas reinhardtii","carotenoid cleavage dioxygenase 7","protein_coding"
"Cre06.g278270","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g280450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g280800","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre06.g281766","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre06.g285650","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 6","protein_coding"
"Cre06.g286650","No alias","Chlamydomonas reinhardtii","methyltransferase 1","protein_coding"
"Cre06.g287950","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre06.g289050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g291050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g293000","No alias","Chlamydomonas reinhardtii","DNA primase, large subunit family","protein_coding"
"Cre06.g294301","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g294350","No alias","Chlamydomonas reinhardtii","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Cre06.g295200","No alias","Chlamydomonas reinhardtii","cryptochrome 1","protein_coding"
"Cre06.g295700","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre06.g296150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g299100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g299200","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre06.g302250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g303536","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g307350","No alias","Chlamydomonas reinhardtii","ARF-GAP domain 5","protein_coding"
"Cre06.g308300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g312350","No alias","Chlamydomonas reinhardtii","DNA primases;DNA primases","protein_coding"
"Cre07.g314050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g314700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g316850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g318900","No alias","Chlamydomonas reinhardtii","ankyrin repeat family protein","protein_coding"
"Cre07.g319500","No alias","Chlamydomonas reinhardtii","phytochelatin synthase 1 (PCS1)","protein_coding"
"Cre07.g323800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g325716","No alias","Chlamydomonas reinhardtii","DNA ligase 1","protein_coding"
"Cre07.g325722","No alias","Chlamydomonas reinhardtii","transcriptional coactivator p15 (PC4) family protein (KELP)","protein_coding"
"Cre07.g325753","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g329500","No alias","Chlamydomonas reinhardtii","SITE-1 protease","protein_coding"
"Cre07.g330300","No alias","Chlamydomonas reinhardtii","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Cre07.g330500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g334650","No alias","Chlamydomonas reinhardtii","breast cancer susceptibility1","protein_coding"
"Cre07.g342450","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g343650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g351400","No alias","Chlamydomonas reinhardtii","minichromosome maintenance 10","protein_coding"
"Cre07.g351450","No alias","Chlamydomonas reinhardtii","BUB1-related (BUB1: budding uninhibited by benzymidazol 1)","protein_coding"
"Cre07.g352400","No alias","Chlamydomonas reinhardtii","DNAse I-like superfamily protein","protein_coding"
"Cre07.g355200","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 5","protein_coding"
"Cre08.g358563","No alias","Chlamydomonas reinhardtii","ATP-dependent RNA helicase, putative","protein_coding"
"Cre08.g362800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g364250","No alias","Chlamydomonas reinhardtii","transcription regulators","protein_coding"
"Cre08.g369976","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g378500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g387615","No alias","Chlamydomonas reinhardtii","Zinc-finger domain of monoamine-oxidase A repressor R1","protein_coding"
"Cre09.g389550","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre09.g390467","No alias","Chlamydomonas reinhardtii","Plasma-membrane choline transporter family protein","protein_coding"
"Cre09.g393600","No alias","Chlamydomonas reinhardtii","DNA replication protein-related","protein_coding"
"Cre09.g396957","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g397350","No alias","Chlamydomonas reinhardtii","RAD3-like DNA-binding helicase protein","protein_coding"
"Cre09.g399252","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g405250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g417700","No alias","Chlamydomonas reinhardtii","ribosomal protein 1","protein_coding"
"Cre10.g419850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g426850","No alias","Chlamydomonas reinhardtii","HXXXD-type acyl-transferase family protein","protein_coding"
"Cre10.g428800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g429600","No alias","Chlamydomonas reinhardtii","DHHC-type zinc finger family protein","protein_coding"
"Cre10.g429850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g430650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g432800","No alias","Chlamydomonas reinhardtii","40s ribosomal protein SA B","protein_coding"
"Cre10.g435350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g437300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g440200","No alias","Chlamydomonas reinhardtii","structural maintenance of chromosomes 5","protein_coding"
"Cre10.g441700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g446850","No alias","Chlamydomonas reinhardtii","transcription factor jumonji (jmjC) domain-containing protein","protein_coding"
"Cre10.g452300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g455600","No alias","Chlamydomonas reinhardtii","origin recognition complex 1","protein_coding"
"Cre10.g455850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre10.g458800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g460000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g461750","No alias","Chlamydomonas reinhardtii","methyltransferase 1","protein_coding"
"Cre11.g467592","No alias","Chlamydomonas reinhardtii","bidirectional amino acid transporter 1","protein_coding"
"Cre11.g467618","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467654","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre11.g467745","No alias","Chlamydomonas reinhardtii","spindle pole body component 98","protein_coding"
"Cre11.g468356","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g475650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g482483","No alias","Chlamydomonas reinhardtii","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Cre12.g483600","No alias","Chlamydomonas reinhardtii","Ankyrin repeat family protein","protein_coding"
"Cre12.g488500","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding"
"Cre12.g490250","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre12.g490451","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g493550","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre12.g497000","No alias","Chlamydomonas reinhardtii","protein phosphatase 2A  subunit A3","protein_coding"
"Cre12.g497650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g498300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512500","No alias","Chlamydomonas reinhardtii","zinc knuckle (CCHC-type) family protein","protein_coding"
"Cre12.g519401","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g523832","No alias","Chlamydomonas reinhardtii","Cytochrome b561/ferric reductase transmembrane protein family","protein_coding"
"Cre12.g524050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g525500","No alias","Chlamydomonas reinhardtii","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Cre12.g528200","No alias","Chlamydomonas reinhardtii","DNA replication helicase, putative","protein_coding"
"Cre12.g530650","No alias","Chlamydomonas reinhardtii","glutamine synthetase 1;4","protein_coding"
"Cre12.g541750","No alias","Chlamydomonas reinhardtii","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"Cre12.g543300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g545800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g546950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g548201","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g550277","No alias","Chlamydomonas reinhardtii","magnesium transporter 2","protein_coding"
"Cre12.g556653","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g558250","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding"
"Cre13.g567800","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2A regulatory B subunit family protein","protein_coding"
"Cre13.g571050","No alias","Chlamydomonas reinhardtii","HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain","protein_coding"
"Cre13.g575300","No alias","Chlamydomonas reinhardtii","Protein kinase family protein with ARM repeat domain","protein_coding"
"Cre13.g578350","No alias","Chlamydomonas reinhardtii","purple acid phosphatase 15","protein_coding"
"Cre13.g588600","No alias","Chlamydomonas reinhardtii","armadillo repeat kinesin 3","protein_coding"
"Cre13.g588900","No alias","Chlamydomonas reinhardtii","Werner syndrome-like exonuclease","protein_coding"
"Cre14.g610000","No alias","Chlamydomonas reinhardtii","AtGCP3 interacting protein 1","protein_coding"
"Cre14.g610050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g628702","No alias","Chlamydomonas reinhardtii","proteasome activating protein 200","protein_coding"
"Cre14.g630811","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g631050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g632600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g632700","No alias","Chlamydomonas reinhardtii","Wall-associated kinase family protein","protein_coding"
"Cre15.g636176","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g651000","No alias","Chlamydomonas reinhardtii","Replication factor-A protein 1-related","protein_coding"
"Cre16.g652950","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding"
"Cre16.g658950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g661100","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre16.g661400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g664100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g665328","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g667900","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding"
"Cre16.g676100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g677920","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g680650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g686500","No alias","Chlamydomonas reinhardtii","HAD superfamily, subfamily IIIB acid phosphatase","protein_coding"
"Cre16.g686622","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g688350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g693950","No alias","Chlamydomonas reinhardtii","glyoxal oxidase-related protein","protein_coding"
"Cre17.g700500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g712900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g718400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g718550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g720800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g725900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g726500","No alias","Chlamydomonas reinhardtii","origin recognition complex subunit 4","protein_coding"
"Cre17.g732600","No alias","Chlamydomonas reinhardtii","glyoxal oxidase-related protein","protein_coding"
"Cre17.g738150","No alias","Chlamydomonas reinhardtii","ERD (early-responsive to dehydration stress) family protein","protein_coding"
"Cre17.g740510","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre17.g746347","No alias","Chlamydomonas reinhardtii","uracil dna glycosylase","protein_coding"
"evm.model.contig_2015.24","No alias","Porphyridium purpureum","(at3g56760 : 113.0) Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 115971 Blast hits to 114244 proteins in 3013 species: Archae - 152; Bacteria - 14469; Metazoa - 43130; Fungi - 12702; Plants - 24192; Viruses - 490; Other Eukaryotes - 20836 (source: NCBI BLink). & (p53681|crk_dauca : 112.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2016.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2025.25","No alias","Porphyridium purpureum","(at4g14350 : 376.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G23310.1); Has 110439 Blast hits to 109096 proteins in 3570 species: Archae - 132; Bacteria - 13667; Metazoa - 39169; Fungi - 11337; Plants - 26451; Viruses - 447; Other Eukaryotes - 19236 (source: NCBI BLink). & (p47997|g11a_orysa : 161.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2045.3","No alias","Porphyridium purpureum","(at3g20250 : 321.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 5 (PUM5); FUNCTIONS IN: RNA binding, binding; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 6 (TAIR:AT4G25880.1); Has 4771 Blast hits to 2450 proteins in 259 species: Archae - 0; Bacteria - 10; Metazoa - 1074; Fungi - 1429; Plants - 1087; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2054.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2068.6","No alias","Porphyridium purpureum","(at5g20070 : 147.0) nudix hydrolase homolog 19 (NUDX19); FUNCTIONS IN: hydrolase activity, metal ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc ribbon, NADH pyrophosphatase (InterPro:IPR015376), NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NADH pyrophosphatase-like, N-terminal (InterPro:IPR015375), NUDIX hydrolase domain (InterPro:IPR000086); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2072.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.29","No alias","Porphyridium purpureum","(at5g04850 : 114.0) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2094.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2095.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2096.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2098.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2099.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2108.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2116.9","No alias","Porphyridium purpureum","(at4g16420 : 81.6) Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.; homolog of yeast ADA2 2B (ADA2B); CONTAINS InterPro DOMAIN/s: SANT, eukarya (InterPro:IPR017884), SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SWIRM (InterPro:IPR007526), Zinc finger, ZZ-type (InterPro:IPR000433), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2A (TAIR:AT3G07740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2122.19","No alias","Porphyridium purpureum","(at5g13530 : 101.0) Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling.  KEG is essential for Arabidopsis growth and development.  ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway.; KEEP ON GOING (KEG); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32250.3). & (q8vyx2|akt1_orysa : 89.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2144.6","No alias","Porphyridium purpureum","(at2g21790 : 1100.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 2200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2194.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2219.8","No alias","Porphyridium purpureum","(at1g73030 : 130.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730.  CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development.  ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; VPS46.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 46.1 (TAIR:AT1G17730.1); Has 1330 Blast hits to 1329 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 507; Fungi - 292; Plants - 340; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2248.1","No alias","Porphyridium purpureum","(at2g47980 : 116.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2251.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2255.2","No alias","Porphyridium purpureum","(at5g10980 : 218.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 216.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2270.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2276.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2278.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2287.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2293.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2294.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2340.5","No alias","Porphyridium purpureum","(at1g08860 : 228.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2352.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2357.1","No alias","Porphyridium purpureum","(at1g53165 : 218.0) ATMAP4K ALPHA1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response, response to wounding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15220.1). & (q5qn75|m2k1_orysa : 142.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2423.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2446.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2501.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2501.4","No alias","Porphyridium purpureum","(at5g61000 : 172.0) RPA70D; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: RPA70-kDa subunit B (TAIR:AT5G08020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2623.1","No alias","Porphyridium purpureum","(at1g15690 : 285.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (q06572|avp_horvu : 282.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) - Hordeum vulgare (Barley) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2625.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3383.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3395.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3399.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3412.2","No alias","Porphyridium purpureum","(q9xfg3|tbg_phypa : 514.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at5g05620 : 508.0) Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin  complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3419.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3426.15","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3451.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3468.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3471.8","No alias","Porphyridium purpureum","(at1g59890 : 215.0) SIN3-like 5 (SNL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 6 (TAIR:AT1G10450.1). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3477.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3532.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3557.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3564.6","No alias","Porphyridium purpureum","(at2g30660 : 182.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3592.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3594.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3641.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3641.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3671.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3699.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3708.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_435.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_437.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_438.4","No alias","Porphyridium purpureum","(at4g32600 : 118.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1); Has 7180 Blast hits to 7160 proteins in 223 species: Archae - 0; Bacteria - 6; Metazoa - 2398; Fungi - 545; Plants - 2870; Viruses - 33; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_440.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4405.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4407.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4419.9","No alias","Porphyridium purpureum","(p36183|enpl_horvu : 503.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (at4g24190 : 494.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat.  Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_443.3","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_4438.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4448.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4450.5","No alias","Porphyridium purpureum","(at4g22260 : 177.0) Similar to mitochondrial alternative oxidase.  im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.; IMMUTANS (IM); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 2 (TAIR:AT5G64210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4450.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4454.4","No alias","Porphyridium purpureum","(at5g48840 : 145.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24035|panc_lotja : 144.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4476.6","No alias","Porphyridium purpureum","(at3g13450 : 425.0) branched chain alpha-keto acid dehydrogenase E1 beta; DARK INDUCIBLE 4 (DIN4); FUNCTIONS IN: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity, catalytic activity; INVOLVED IN: response to light stimulus, response to sucrose stimulus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: branched-chain alpha-keto acid decarboxylase E1 beta subunit (TAIR:AT1G55510.1); Has 16402 Blast hits to 16393 proteins in 2657 species: Archae - 210; Bacteria - 10668; Metazoa - 495; Fungi - 224; Plants - 385; Viruses - 0; Other Eukaryotes - 4420 (source: NCBI BLink). & (p52904|odpb_pea : 184.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.8","No alias","Porphyridium purpureum","(at3g54960 : 232.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-3 (PDIL1-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-4 (TAIR:AT5G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29828|pdi_medsa : 215.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4500.2","No alias","Porphyridium purpureum","(at5g41080 : 99.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: senescence-related gene 3 (TAIR:AT3G02040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4502.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4503.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4547.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4569.1","No alias","Porphyridium purpureum","(at1g16010 : 119.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 2 (MGT2); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 1 (TAIR:AT1G80900.1). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_468.9","No alias","Porphyridium purpureum","(at2g47210 : 82.4) myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_484.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_484.8","No alias","Porphyridium purpureum","(at2g38630 : 499.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G54190.1); Has 139 Blast hits to 135 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_494.4","No alias","Porphyridium purpureum","(q43644|ndus1_soltu : 364.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 352.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I).  The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_497.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_500.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_512.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_516.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_517.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_524.5","No alias","Porphyridium purpureum","(at5g10940 : 144.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G45620.1). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_529.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_529.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_531.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_535.5","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_566.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_579.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_601.4","No alias","Porphyridium purpureum","(at2g37680 : 208.0) CONTAINS InterPro DOMAIN/s: Vacuolar import/degradation protein Vid24 (InterPro:IPR018618); Has 318 Blast hits to 317 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 184; Plants - 51; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_610.3","No alias","Porphyridium purpureum","(at3g42660 : 146.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_623.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_655.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_662.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_733.1","No alias","Porphyridium purpureum","(q9lre6|dpod1_orysa : 964.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 954.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 1908.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_738.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_748.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_774.1","No alias","Porphyridium purpureum","(at5g39440 : 163.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 145.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_861.1","No alias","Porphyridium purpureum","(at5g60550 : 182.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75v63|sapk3_orysa : 121.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_929.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.231","No alias","Cyanophora paradoxa","(o81263|kith_orysa : 138.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 136.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000056.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.131","No alias","Cyanophora paradoxa","(at5g25150 : 135.0) Encodes a putative TATA-binding-protein associated factor TAF5.  TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (p25387|gblp_chlre : 127.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.134","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.161","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.196","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000097.3","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000113.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000139.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000139.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000142.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.186","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.81","No alias","Cyanophora paradoxa","(at5g05970 : 123.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000145.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000158.110","No alias","Cyanophora paradoxa","(q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (at5g59850 : 209.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000178.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000190.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.14","No alias","Cyanophora paradoxa","(at3g02710 : 325.0) Encodes a protein with a putative role in mRNA splicing.; ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1716, eukaryotic (InterPro:IPR013180), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 346 Blast hits to 342 proteins in 158 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 94; Plants - 41; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.104","No alias","Cyanophora paradoxa","(at5g38560 : 130.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 112.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000217.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.27","No alias","Cyanophora paradoxa","(at5g52800 : 126.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.113","No alias","Cyanophora paradoxa","(p51173|apea_dicdi : 224.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (at2g41460 : 222.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.115","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.127","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.178","No alias","Cyanophora paradoxa","(q9lre5|dpod2_orysa : 317.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at2g42120 : 311.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000310.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.9","No alias","Cyanophora paradoxa","(at5g41880 : 330.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000367.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000382.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.42","No alias","Cyanophora paradoxa","(at3g27060 : 431.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (p49730|rir2_tobac : 427.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.21","No alias","Cyanophora paradoxa","(at3g18630 : 220.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.35","No alias","Cyanophora paradoxa","(at5g12320 : 111.0) ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G19150.1); Has 86458 Blast hits to 28632 proteins in 1360 species: Archae - 129; Bacteria - 7616; Metazoa - 44184; Fungi - 6856; Plants - 3179; Viruses - 915; Other Eukaryotes - 23579 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000391.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000444.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000444.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000545.28","No alias","Cyanophora paradoxa","(at5g17410 : 387.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000571.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000605.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000663.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.49","No alias","Cyanophora paradoxa","(at3g52090 : 141.0) Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.; NRPB11; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, holoenzyme, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site (InterPro:IPR008193), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.68","No alias","Cyanophora paradoxa","(at5g13240 : 120.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000743.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000754.31","No alias","Cyanophora paradoxa","(at1g08130 : 306.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 80.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000769.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000769.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000792.33","No alias","Cyanophora paradoxa","(at2g01830 : 104.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000796.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000823.19","No alias","Cyanophora paradoxa","(at2g06510 : 172.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000863.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.33","No alias","Cyanophora paradoxa","(p25387|gblp_chlre : 151.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (at3g49660 : 140.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000880.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000981.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000989.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001000.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001001.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001041.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.5","No alias","Cyanophora paradoxa","(o04015|p5cs_actch : 121.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 110.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001056.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001065.26","No alias","Cyanophora paradoxa","(at1g17070 : 117.0) GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tuftelin interacting protein N-terminal (InterPro:IPR022159), D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT2G42330.2); Has 1264 Blast hits to 1232 proteins in 250 species: Archae - 2; Bacteria - 6; Metazoa - 735; Fungi - 146; Plants - 190; Viruses - 1; Other Eukaryotes - 184 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001073.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.27","No alias","Cyanophora paradoxa","(at5g16300 : 82.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001107.10","No alias","Cyanophora paradoxa","(at1g67630 : 106.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001126.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.43","No alias","Cyanophora paradoxa","(at5g52910 : 104.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.10","No alias","Cyanophora paradoxa","(at2g44900 : 135.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001181.19","No alias","Cyanophora paradoxa","(at1g17370 : 177.0) oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001187.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001187.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.1","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00001214.13","No alias","Cyanophora paradoxa","(at5g26680 : 234.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 231.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001214.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001215.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001215.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001229.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001249.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001278.20","No alias","Cyanophora paradoxa","(at3g54380 : 83.6) SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001292.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001292.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001299.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001299.12","No alias","Cyanophora paradoxa","(at4g31400 : 91.7) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an  N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7  temperature-sensitive mutation.  Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001302.6","No alias","Cyanophora paradoxa","(at3g25100 : 125.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001335.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001336.13","No alias","Cyanophora paradoxa","(at5g11850 : 146.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein tyrosine kinase family protein (TAIR:AT1G73660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001336.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001366.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001372.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001374.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001376.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001437.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001574.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.14","No alias","Cyanophora paradoxa","(at1g04020 : 90.1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020537.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.141","No alias","Cyanophora paradoxa","(q43266|pcna_maize : 272.0) Proliferating cell nuclear antigen (PCNA) - Zea mays (Maize) & (at1g07370 : 265.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.241","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.196","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020610.15","No alias","Cyanophora paradoxa","(at1g15130 : 112.0) Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.99","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.39","No alias","Cyanophora paradoxa","(at3g19210 : 499.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 192.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020616.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020616.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020660.47","No alias","Cyanophora paradoxa","(at2g28315 : 140.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 111.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.26","No alias","Cyanophora paradoxa","(at3g02920 : 90.9) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.128","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020786.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020830.100","No alias","Cyanophora paradoxa","(at3g57890 : 151.0) Tubulin binding cofactor C domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); BEST Arabidopsis thaliana protein match is: C-CAP/cofactor C-like domain-containing protein (TAIR:AT2G42230.2). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.6","No alias","Cyanophora paradoxa","(at2g06530 : 132.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.68","No alias","Cyanophora paradoxa","(at1g67320 : 337.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020878.17","No alias","Cyanophora paradoxa","(at3g19080 : 101.0) SWIB complex BAF60b domain-containing protein; CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121), SWIB domain (InterPro:IPR019835), DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT1G49520.1); Has 4780 Blast hits to 2475 proteins in 346 species: Archae - 0; Bacteria - 702; Metazoa - 1207; Fungi - 636; Plants - 993; Viruses - 61; Other Eukaryotes - 1181 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020918.7","No alias","Cyanophora paradoxa","(at4g17895 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.41","No alias","Cyanophora paradoxa","(at2g25100 : 214.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020960.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.140","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.28","No alias","Cyanophora paradoxa","(at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.46","No alias","Cyanophora paradoxa","(at5g03730 : 143.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021036.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021072.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021073.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021133.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021137.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021178.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021254.39","No alias","Cyanophora paradoxa","(at5g59440 : 149.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of  263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021257.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021275.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021282.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021318.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.67","No alias","Cyanophora paradoxa","(at2g29570 : 310.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (o82134|pcna_pea : 310.0) Proliferating cell nuclear antigen - Pisum sativum (Garden pea) & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.35","No alias","Cyanophora paradoxa","(at1g78770 : 429.0) anaphase promoting complex 6 (APC6); FUNCTIONS IN: binding; INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis, cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-3 (InterPro:IPR011716), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 10888 Blast hits to 7341 proteins in 968 species: Archae - 487; Bacteria - 4678; Metazoa - 2008; Fungi - 460; Plants - 439; Viruses - 0; Other Eukaryotes - 2816 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021462.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021462.13","No alias","Cyanophora paradoxa","(at3g54610 : 310.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis.  It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG.  In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been  previously acetylated on K9 both serve as excellent substrates  for HAG1-catalyzed acetylation. However, prior acetylation  of H3 lysine 14 blocks radioactive acetylation of the  peptide by HAG1.  HAG1 is specific for  histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021463.20","No alias","Cyanophora paradoxa","(p93798|snaa_vitvi : 281.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Vitis vinifera (Grape) & (at3g56190 : 274.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021489.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021682.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021682.9","No alias","Cyanophora paradoxa","(q9xet4|rs7_secce : 233.0) 40S ribosomal protein S7 - Secale cereale (Rye) & (at1g48830 : 232.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT3G02560.2); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 158; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"Glyma.01G000174","No alias","Glycine max","photosystem II stability/assembly factor, chloroplast (HCF136)","protein_coding"
"Glyma.01G004700","No alias","Glycine max","Mnd1 family protein","protein_coding"
"Glyma.01G027800","No alias","Glycine max","Protein of Unknown Function (DUF239)","protein_coding"
"Glyma.01G037600","No alias","Glycine max","formin 8","protein_coding"
"Glyma.01G139000","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.02G023800","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.02G068400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G079900","No alias","Glycine max","DHHC-type zinc finger family protein","protein_coding"
"Glyma.02G151800","No alias","Glycine max","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain","protein_coding"
"Glyma.02G212500","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Glyma.03G007300","No alias","Glycine max","frataxin homolog","protein_coding"
"Glyma.03G021600","No alias","Glycine max","cytochrome P450, family 704, subfamily A, polypeptide 2","protein_coding"
"Glyma.03G028000","No alias","Glycine max","Arginase/deacetylase superfamily protein","protein_coding"
"Glyma.03G088500","No alias","Glycine max","RNA polymerase II, Rpb4, core protein","protein_coding"
"Glyma.03G111400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.03G118700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G237700","No alias","Glycine max","cyclin family","protein_coding"
"Glyma.04G075900","No alias","Glycine max","Peptidyl-tRNA hydrolase II (PTH2) family protein","protein_coding"
"Glyma.04G078300","No alias","Glycine max","basic leucine zipper 9","protein_coding"
"Glyma.04G237100","No alias","Glycine max","Protein of unknown function (DUF668)","protein_coding"
"Glyma.05G021900","No alias","Glycine max","Cytochrome P450 superfamily protein","protein_coding"
"Glyma.05G028700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G115000","No alias","Glycine max","GTP-binding 2","protein_coding"
"Glyma.05G130500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G237600","No alias","Glycine max","Protein of unknown function (DUF1639)","protein_coding"
"Glyma.06G032000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G047900","No alias","Glycine max","BSD domain-containing protein","protein_coding"
"Glyma.06G074140","No alias","Glycine max","zinc ion binding","protein_coding"
"Glyma.06G151900","No alias","Glycine max","plant glycogenin-like starch initiation protein 1","protein_coding"
"Glyma.06G184200","No alias","Glycine max","trehalose-phosphatase/synthase 9","protein_coding"
"Glyma.07G007000","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.07G034800","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.07G113400","No alias","Glycine max","Protein prenylyltransferase superfamily protein","protein_coding"
"Glyma.08G084000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G155000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G304100","No alias","Glycine max","Reticulon family protein","protein_coding"
"Glyma.08G321000","No alias","Glycine max","zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein","protein_coding"
"Glyma.09G035000","No alias","Glycine max","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Glyma.09G119200","No alias","Glycine max","glycerol-3-phosphate acyltransferase 9","protein_coding"
"Glyma.09G133100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G266700","No alias","Glycine max","early nodulin-like protein 18","protein_coding"
"Glyma.10G266000","No alias","Glycine max","transcription regulators","protein_coding"
"Glyma.11G001800","No alias","Glycine max","cyclin-related","protein_coding"
"Glyma.11G007100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.11G019400","No alias","Glycine max","POZ/BTB containin G-protein 1","protein_coding"
"Glyma.11G099800","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.11G170601","No alias","Glycine max","cleavage and polyadenylation specificity factor 100","protein_coding"
"Glyma.12G025700","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.12G050000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G051200","No alias","Glycine max","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding"
"Glyma.12G164000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G190500","No alias","Glycine max","Plant-specific transcription factor YABBY family protein","protein_coding"
"Glyma.13G096925","No alias","Glycine max","pseudo-response regulator 7","protein_coding"
"Glyma.13G107200","No alias","Glycine max","zinc ion binding","protein_coding"
"Glyma.13G115000","No alias","Glycine max","RAS associated with diabetes protein 51","protein_coding"
"Glyma.13G234000","No alias","Glycine max","Transcriptional coactivator/pterin dehydratase","protein_coding"
"Glyma.13G240500","No alias","Glycine max","allantoinase","protein_coding"
"Glyma.13G325600","No alias","Glycine max","dsRNA-binding protein 2","protein_coding"
"Glyma.14G023700","No alias","Glycine max","OTU-like cysteine protease family protein","protein_coding"
"Glyma.14G097000","No alias","Glycine max","IQ-domain 6","protein_coding"
"Glyma.14G165700","No alias","Glycine max","MAPK/ERK kinase kinase 1","protein_coding"
"Glyma.15G008100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G064200","No alias","Glycine max","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"Glyma.16G091200","No alias","Glycine max","LAG1 longevity assurance homolog 3","protein_coding"
"Glyma.16G156500","No alias","Glycine max","forkhead-associated (FHA) domain-containing protein","protein_coding"
"Glyma.16G173500","No alias","Glycine max","SLAC1 homologue 3","protein_coding"
"Glyma.16G177900","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Glyma.17G016600","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.17G029800","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.17G036500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G174100","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.17G243100","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding"
"Glyma.18G071300","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.18G243100","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.19G122700","No alias","Glycine max","myb-like HTH transcriptional regulator family protein","protein_coding"
"Glyma.19G190667","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.20G124600","No alias","Glycine max","transcription regulators","protein_coding"
"Glyma.20G147200","No alias","Glycine max","C-8 sterol isomerases","protein_coding"
"Glyma.20G185100","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.20G195300","No alias","Glycine max","Mitochondrial substrate carrier family protein","protein_coding"
"GRMZM2G006530","No alias","Zea mays","homolog of yeast sucrose nonfermenting 4","protein_coding"
"GRMZM2G007258","No alias","Zea mays","titan9","protein_coding"
"GRMZM2G010488","No alias","Zea mays","U-box domain-containing protein kinase family protein","protein_coding"
"GRMZM2G012123","No alias","Zea mays","Sterile alpha motif (SAM) domain-containing protein","protein_coding"
"GRMZM2G019251","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G022787","No alias","Zea mays","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"GRMZM2G023992","No alias","Zea mays","Reticulon family protein","protein_coding"
"GRMZM2G026676","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G029979","No alias","Zea mays","bZIP transcription factor family protein","protein_coding"
"GRMZM2G034389","No alias","Zea mays","peptide transporter 2","protein_coding"
"GRMZM2G034835","No alias","Zea mays","Pectin lyase-like superfamily protein","protein_coding"
"GRMZM2G036025","No alias","Zea mays","PDI-like 1-2","protein_coding"
"GRMZM2G037614","No alias","Zea mays","Transketolase family protein","protein_coding"
"GRMZM2G039848","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G041518","No alias","Zea mays","hercules receptor kinase 2","protein_coding"
"GRMZM2G041729","No alias","Zea mays","Calcium-binding EF-hand family protein","protein_coding"
"GRMZM2G042741","No alias","Zea mays","SAUR-like auxin-responsive protein family","protein_coding"
"GRMZM2G044317","No alias","Zea mays","DNA primase, large subunit family","protein_coding"
"GRMZM2G057571","No alias","Zea mays","zinc knuckle (CCHC-type) family protein","protein_coding"
"GRMZM2G059877","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G066480","No alias","Zea mays","Plant transposase (Ptta/En/Spm family)","protein_coding"
"GRMZM2G066950","No alias","Zea mays","Plant invertase/pectin methylesterase inhibitor superfamily protein","protein_coding"
"GRMZM2G068255","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G076034","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G090505","No alias","Zea mays","Caleosin-related family protein","protein_coding"
"GRMZM2G093079","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G093945","No alias","Zea mays","Galactose mutarotase-like superfamily protein","protein_coding"
"GRMZM2G097641","No alias","Zea mays","Sucrose-6F-phosphate phosphohydrolase family protein","protein_coding"
"GRMZM2G099502","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G106683","No alias","Zea mays","carboxypeptidase D, putative","protein_coding"
"GRMZM2G107737","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G121166","No alias","Zea mays","transcription regulators","protein_coding"
"GRMZM2G125156","No alias","Zea mays","related to KPC1","protein_coding"
"GRMZM2G126900","No alias","Zea mays","myo-inositol oxygenase 1","protein_coding"
"GRMZM2G130904","No alias","Zea mays","Peroxidase superfamily protein","protein_coding"
"GRMZM2G133275","No alias","Zea mays","Lactoylglutathione lyase / glyoxalase I family protein","protein_coding"
"GRMZM2G135052","No alias","Zea mays","Homeodomain-like superfamily protein","protein_coding"
"GRMZM2G141859","No alias","Zea mays","pol-like 5","protein_coding"
"GRMZM2G141975","No alias","Zea mays","oligopeptide transporter 4","protein_coding"
"GRMZM2G144716","No alias","Zea mays","NADH:ubiquinone oxidoreductase intermediate-associated protein 30","protein_coding"
"GRMZM2G146711","No alias","Zea mays","exocyst subunit exo70 family protein G1","protein_coding"
"GRMZM2G146761","No alias","Zea mays","rRNA processing protein-related","protein_coding"
"GRMZM2G155380","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G156246","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G168886","No alias","Zea mays","anaphase-promoting complex/cyclosome 2","protein_coding"
"GRMZM2G306945","No alias","Zea mays","succinate dehydrogenase 1-1","protein_coding"
"GRMZM2G310175","No alias","Zea mays","phosphate transporter 1;3","protein_coding"
"GRMZM2G315072","No alias","Zea mays","XB3 ortholog 2 in Arabidopsis thaliana","protein_coding"
"GRMZM2G363377","No alias","Zea mays","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"GRMZM2G363530","No alias","Zea mays","structural molecules","protein_coding"
"GRMZM2G364129","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G369884","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G371276","No alias","Zea mays","SOS3-interacting protein 1","protein_coding"
"GRMZM2G378301","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G465764","No alias","Zea mays","glucan synthase-like 7","protein_coding"
"GRMZM2G478876","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G495337","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G504175","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G541772","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G829738","No alias","Zea mays","CTC-interacting domain 4","protein_coding"
"GRMZM5G865047","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM6G748133","No alias","Zea mays","chitin elicitor receptor kinase 1","protein_coding"
"HORVU0Hr1G018970.2","No alias","Hordeum vulgare","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"HORVU0Hr1G032400.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G040320.1","No alias","Hordeum vulgare","component *(NRPB4) of RNA polymerase II complex","protein_coding"
"HORVU1Hr1G004490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G022800.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G026780.1","No alias","Hordeum vulgare","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"HORVU1Hr1G031950.5","No alias","Hordeum vulgare","miRNA uridylyltransferase *(URT1)","protein_coding"
"HORVU1Hr1G037460.15","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G048630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G054110.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G056380.1","No alias","Hordeum vulgare","CDKC protein kinase & catalytic component *(CDKC) of cyclin-dependent kinase complex & catalytic component *(CDKC-1/CTK1) of polymerase-II kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU1Hr1G058700.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G060150.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G061810.1","No alias","Hordeum vulgare","component *(NRPB7) of RNA polymerase II complex","protein_coding"
"HORVU1Hr1G073500.4","No alias","Hordeum vulgare","arginyl-tRNA-protein transferase *(ATE) & EC_2.3 acyltransferase","protein_coding"
"HORVU1Hr1G082970.1","No alias","Hordeum vulgare","RING-H2-class CTL-subclass E3 ubiquitin ligase","protein_coding"
"HORVU1Hr1G083580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G012710.2","No alias","Hordeum vulgare","copper-containing amine oxidase *(CuAO) & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding"
"HORVU2Hr1G012760.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G023000.5","No alias","Hordeum vulgare","ROP-activating protein *(RenGAP)","protein_coding"
"HORVU2Hr1G059170.16","No alias","Hordeum vulgare","Golgin-type membrane tethering protein *(GRIP)","protein_coding"
"HORVU2Hr1G074910.6","No alias","Hordeum vulgare","class-II histone methyltransferase *(ASH) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"HORVU2Hr1G076810.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G079510.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G081450.2","No alias","Hordeum vulgare","associated component *(POT) of telomerase ribonucleoprotein complex","protein_coding"
"HORVU2Hr1G083610.1","No alias","Hordeum vulgare","TOR-dependent regulatory protein *(MRF) of protein translation","protein_coding"
"HORVU2Hr1G091890.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G101360.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G118320.7","No alias","Hordeum vulgare","phosphatidylinositol 4-kinase *(PI4K-gamma)","protein_coding"
"HORVU2Hr1G118420.1","No alias","Hordeum vulgare","RecA-activity modulator *(RecX)","protein_coding"
"HORVU3Hr1G000760.3","No alias","Hordeum vulgare","acetyl-CoA C-acyltransferase & EC_2.3 acyltransferase","protein_coding"
"HORVU3Hr1G010030.10","No alias","Hordeum vulgare","regulatory protein *(MAF1) of RNA polymerase III","protein_coding"
"HORVU3Hr1G017940.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G019010.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G044640.3","No alias","Hordeum vulgare","component *(DET1) of CDDD substrate adaptor module of CUL4-based ubiquitin ligase","protein_coding"
"HORVU3Hr1G072260.1","No alias","Hordeum vulgare","VOZ-type transcription factor","protein_coding"
"HORVU3Hr1G073300.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G078930.1","No alias","Hordeum vulgare","component *(NRPD5) of RNA polymerase IV complex & component *(NRPB5) of RNA polymerase II complex & component *(NRPC5) of RNA polymerase III complex & component *(NRPA5) of RNA polymerase I complex","protein_coding"
"HORVU3Hr1G080560.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G090350.1","No alias","Hordeum vulgare","large subunit of TFIIIf transcription factor module","protein_coding"
"HORVU3Hr1G094570.3","No alias","Hordeum vulgare","component *(EXO70) of Exocyst complex","protein_coding"
"HORVU3Hr1G096580.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G098580.2","No alias","Hordeum vulgare","oxidoreductase *(LBO) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU3Hr1G104220.2","No alias","Hordeum vulgare","component *(APH1) of gamma secretase complex","protein_coding"
"HORVU3Hr1G106730.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G110150.3","No alias","Hordeum vulgare","CDKC protein kinase & catalytic component *(CDKC) of cyclin-dependent kinase complex & catalytic component *(CDKC-1/CTK1) of polymerase-II kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU3Hr1G110470.8","No alias","Hordeum vulgare","component *(RNPS1) of RNA quality control Exon Junction complex","protein_coding"
"HORVU4Hr1G004590.4","No alias","Hordeum vulgare","bifunctional inositol pyrophosphate kinase and phosphatase *(VIP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G015420.3","No alias","Hordeum vulgare","pre-40S ribosomal-subunit proteome nuclear export factor *(Dim2)","protein_coding"
"HORVU4Hr1G033410.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G035380.1","No alias","Hordeum vulgare","glutathione peroxidase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"HORVU4Hr1G036350.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G060270.6","No alias","Hordeum vulgare","component *(SRm160) of RNA quality control Exon Junction complex","protein_coding"
"HORVU4Hr1G074650.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G078800.2","No alias","Hordeum vulgare","methylation reader component *(ING1)","protein_coding"
"HORVU4Hr1G079900.1","No alias","Hordeum vulgare","component *(MTB) of adenosine N6-methyltransferase complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"HORVU4Hr1G088850.4","No alias","Hordeum vulgare","chaperone of protochlorophyllide oxidoreductase *(CPP1)","protein_coding"
"HORVU5Hr1G009580.4","No alias","Hordeum vulgare","hydroxyproline O-galactosyltransferase *(GALT) & hydroxyproline-O-galactosyltransferase *(GALT)","protein_coding"
"HORVU5Hr1G029490.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G044990.2","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G047100.5","No alias","Hordeum vulgare","component *(HYL1) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"HORVU5Hr1G048660.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G049020.1","No alias","Hordeum vulgare","component *(TON1) of TON1-TRM-PP2A (TTP) preprophase band formation complex","protein_coding"
"HORVU5Hr1G049220.7","No alias","Hordeum vulgare","deubiquitinase *(OTU6-12)","protein_coding"
"HORVU5Hr1G052890.2","No alias","Hordeum vulgare","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & spermine synthase","protein_coding"
"HORVU5Hr1G056620.2","No alias","Hordeum vulgare","NAD kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G058830.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G066030.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G076550.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G078370.1","No alias","Hordeum vulgare","subunit alpha of type-I protein prenyltransferase complex & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU5Hr1G085120.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G104000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G104090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G110170.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G115470.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G118160.5","No alias","Hordeum vulgare","regulatory component *(DCP1) of mRNA decapping complex","protein_coding"
"HORVU5Hr1G118520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G124850.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G009380.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G011160.8","No alias","Hordeum vulgare","M14-class carboxypeptidase","protein_coding"
"HORVU6Hr1G012530.3","No alias","Hordeum vulgare","adenosine N6-methyltransferase *(FIO1)","protein_coding"
"HORVU6Hr1G018770.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G021670.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G034070.1","No alias","Hordeum vulgare","SMARCC component *(SWI3) of chromatin remodeling complex","protein_coding"
"HORVU6Hr1G047770.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G049910.2","No alias","Hordeum vulgare","UDP-sugar transporter *(ROCK/TEX2) & nucleotide sugar transporter *(ROCK)","protein_coding"
"HORVU6Hr1G058100.1","No alias","Hordeum vulgare","type-II-residues E3 ubiquitin ligase *(PRT1)","protein_coding"
"HORVU6Hr1G071930.4","No alias","Hordeum vulgare","component *(NRPE4) of RNA polymerase V complex & component *(NRPD4) of RNA polymerase IV complex","protein_coding"
"HORVU6Hr1G076310.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G091710.2","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen & deoxyhypusine hydroxylase","protein_coding"
"HORVU6Hr1G093310.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G095080.4","No alias","Hordeum vulgare","outer membrane porin *(OEP21)","protein_coding"
"HORVU7Hr1G000910.1","No alias","Hordeum vulgare","NAC-type transcription factor","protein_coding"
"HORVU7Hr1G007920.11","No alias","Hordeum vulgare","component *(SMG9) of SMG1C protein kinase complex","protein_coding"
"HORVU7Hr1G010600.19","No alias","Hordeum vulgare","component *(RPP21) of RNA-dependent RNase P complex","protein_coding"
"HORVU7Hr1G021860.7","No alias","Hordeum vulgare","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU7Hr1G027670.2","No alias","Hordeum vulgare","substrate adaptor of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"HORVU7Hr1G034980.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G039640.20","No alias","Hordeum vulgare","gravity signalling protein factor *(ARG1)","protein_coding"
"HORVU7Hr1G048110.2","No alias","Hordeum vulgare","regulatory component *(FIP37) of adenosine N6-methyltransferase complex","protein_coding"
"HORVU7Hr1G048120.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G051370.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G073570.4","No alias","Hordeum vulgare","NSUN-group-II rRNA methyltransferase","protein_coding"
"HORVU7Hr1G074300.2","No alias","Hordeum vulgare","UDP-D-xylose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"HORVU7Hr1G091230.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G095460.2","No alias","Hordeum vulgare","arogenate dehydrogenase *(ADH)","protein_coding"
"HORVU7Hr1G095900.1","No alias","Hordeum vulgare","metabolite transporter *(DTX)","protein_coding"
"HORVU7Hr1G105050.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G109550.2","No alias","Hordeum vulgare","E3 ubiquitin ligase *(LOG2/LUL)","protein_coding"
"HORVU7Hr1G113500.1","No alias","Hordeum vulgare","RUB ubiquitin-fold protein","protein_coding"
"Kfl00005_0580","kfl00005_0580_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00006_0490","kfl00006_0490_v1.1","Klebsormidium nitens","(at1g79350 : 335.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"Kfl00008_0070","kfl00008_0070_v1.1","Klebsormidium nitens","(at3g18730 : 223.0) Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance.  May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.; TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0110","kfl00009_0110_v1.1","Klebsormidium nitens","(at3g18630 : 321.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0300","kfl00010_0300_v1.1","Klebsormidium nitens","(at3g14740 : 171.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0430","kfl00013_0430_v1.1","Klebsormidium nitens","(at1g18090 : 256.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00017_0130","kfl00017_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00020_0220","kfl00020_0220_v1.1","Klebsormidium nitens","(at3g54750 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"Kfl00023_0290","kfl00023_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00023_0330","kfl00023_0330_v1.1","Klebsormidium nitens","(at2g20635 : 307.0) ATP binding;protein kinases;protein serine/threonine kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Mad3/BUB1 homology region 1 (InterPro:IPR013212), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.1); Has 7386 Blast hits to 7115 proteins in 591 species: Archae - 30; Bacteria - 832; Metazoa - 2305; Fungi - 1186; Plants - 1328; Viruses - 3; Other Eukaryotes - 1702 (source: NCBI BLink). & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0350","kfl00024_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0510","kfl00024_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00025_0110","kfl00025_0110_v1.1","Klebsormidium nitens","(at3g52155 : 141.0) Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); Has 1391 Blast hits to 1391 proteins in 390 species: Archae - 1; Bacteria - 792; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00025_0210","kfl00025_0210_v1.1","Klebsormidium nitens","(at1g71810 : 652.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0270","kfl00026_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00028_0040","kfl00028_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00032_0190","kfl00032_0190_v1.1","Klebsormidium nitens","(at2g39780 : 134.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p83618|rn28_pangi : 105.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00038_0380","kfl00038_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00039_0290","kfl00039_0290_v1.1","Klebsormidium nitens","(at3g19210 : 410.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 187.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"Kfl00044_0340","kfl00044_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00051_0030","kfl00051_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00057_0090","kfl00057_0090_v1.1","Klebsormidium nitens","(at2g22140 : 132.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0150","kfl00057_0150_v1.1","Klebsormidium nitens","(at5g08020 : 486.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00058_g44","kfl00058_g44_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00065_0240","kfl00065_0240_v1.1","Klebsormidium nitens","(at5g19900 : 91.7) PRLI-interacting factor, putative; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"Kfl00070_0070","kfl00070_0070_v1.1","Klebsormidium nitens","(at1g79350 : 143.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"Kfl00075_0310","kfl00075_0310_v1.1","Klebsormidium nitens","(p22177|pcna_soybn : 320.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) (Fragment) - Glycine max (Soybean) & (at2g29570 : 314.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 628.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0010","kfl00080_0010_v1.1","Klebsormidium nitens","(at3g15150 : 100.0) Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.; HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0190","kfl00080_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00083_0060","kfl00083_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00083_0330","kfl00083_0330_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00102_0020","kfl00102_0020_v1.1","Klebsormidium nitens","(at1g74150 : 104.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 11763 Blast hits to 5823 proteins in 445 species: Archae - 10; Bacteria - 555; Metazoa - 4461; Fungi - 1268; Plants - 2654; Viruses - 19; Other Eukaryotes - 2796 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0050","kfl00102_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00108_0130","kfl00108_0130_v1.1","Klebsormidium nitens","(q8lpu5|cmt3_maize : 469.0) DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (Chromomethylase 3) (DNA methyltransferase 105) - Zea mays (Maize) & (at4g19020 : 419.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"Kfl00110_0200","kfl00110_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00110_0320","kfl00110_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00112_0010","kfl00112_0010_v1.1","Klebsormidium nitens","(at1g64960 : 375.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"Kfl00112_0070","kfl00112_0070_v1.1","Klebsormidium nitens","(at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (p25010|ccnal_dauca : 300.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"Kfl00113_0300","kfl00113_0300_v1.1","Klebsormidium nitens","(at4g29170 : 166.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"Kfl00114_0100","kfl00114_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00116_0090","kfl00116_0090_v1.1","Klebsormidium nitens","(at1g04020 : 184.0) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"Kfl00118_0140","kfl00118_0140_v1.1","Klebsormidium nitens","(p32811|phsh_soltu : 847.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 840.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 1680.0) &  (original description: no original description)","protein_coding"
"Kfl00131_0170","kfl00131_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00137_0140","kfl00137_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00141_0070","kfl00141_0070_v1.1","Klebsormidium nitens","(at1g66740 : 256.0) Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility.; SGA2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chromatin assembly or disassembly, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone,  ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: anti- silencing function 1b (TAIR:AT5G38110.1); Has 608 Blast hits to 608 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 247; Fungi - 167; Plants - 75; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00142_0080","kfl00142_0080_v1.1","Klebsormidium nitens","(q7g8y3|isw2_orysa : 220.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 218.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0030","kfl00144_0030_v1.1","Klebsormidium nitens","(at1g18335 : 168.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0040","kfl00147_0040_v1.1","Klebsormidium nitens","(at3g02820 : 124.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00161_0190","kfl00161_0190_v1.1","Klebsormidium nitens","(at4g18590 : 93.6) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"Kfl00173_0090","kfl00173_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00185_0250","kfl00185_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00187_0030","kfl00187_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00192_0150","kfl00192_0150_v1.1","Klebsormidium nitens","(p80028|trxh_chlre : 107.0) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (at3g51030 : 102.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"Kfl00198_0220","kfl00198_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00208_0200","kfl00208_0200_v1.1","Klebsormidium nitens","(at3g48540 : 256.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00209_0100","kfl00209_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00221_0200","kfl00221_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00221_0210","kfl00221_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00222_0100","kfl00222_0100_v1.1","Klebsormidium nitens","(at5g37630 : 265.0) EMBRYO DEFECTIVE 2656 (EMB2656); FUNCTIONS IN: binding; INVOLVED IN: mitotic chromosome condensation, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 333 Blast hits to 316 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 113; Fungi - 138; Plants - 47; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00231_0120","kfl00231_0120_v1.1","Klebsormidium nitens","(at3g57870 : 175.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (p25866|ubc2_wheat : 107.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"Kfl00240_0060","kfl00240_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00242_0010","kfl00242_0010_v1.1","Klebsormidium nitens","(at1g08130 : 782.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 110.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1564.0) &  (original description: no original description)","protein_coding"
"Kfl00250_0150","kfl00250_0150_v1.1","Klebsormidium nitens","(at3g16730 : 121.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"Kfl00257_0040","kfl00257_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00257_0120","kfl00257_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00260_0080","kfl00260_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00260_0120","kfl00260_0120_v1.1","Klebsormidium nitens","(at4g37880 : 313.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT2G22690.2); Has 833 Blast hits to 829 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 364; Fungi - 234; Plants - 138; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00274_0090","kfl00274_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00289_0170","kfl00289_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00290_0040","kfl00290_0040_v1.1","Klebsormidium nitens","(at4g15475 : 145.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"Kfl00302_0080","kfl00302_0080_v1.1","Klebsormidium nitens","(at3g05345 : 128.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00323_0130","kfl00323_0130_v1.1","Klebsormidium nitens","(at3g46940 : 221.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"Kfl00333_0060","kfl00333_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00334_0010","kfl00334_0010_v1.1","Klebsormidium nitens","(at2g25100 : 313.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00349_0090","kfl00349_0090_v1.1","Klebsormidium nitens","(at3g25100 : 380.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 760.0) &  (original description: no original description)","protein_coding"
"Kfl00352_0130","kfl00352_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00365_0030","kfl00365_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00377_0130","kfl00377_0130_v1.1","Klebsormidium nitens","(at5g13240 : 207.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"Kfl00378_g19","kfl00378_g19_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00394_0110","kfl00394_0110_v1.1","Klebsormidium nitens","(at2g20980 : 139.0) Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication.; minichromosome maintenance 10 (MCM10); CONTAINS InterPro DOMAIN/s: Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00411_0100","kfl00411_0100_v1.1","Klebsormidium nitens","(at5g48600 : 1014.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (reliability: 2028.0) &  (original description: no original description)","protein_coding"
"Kfl00415_0100","kfl00415_0100_v1.1","Klebsormidium nitens","(at5g13960 : 389.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl00428_0010","kfl00428_0010_v1.1","Klebsormidium nitens","(at3g03120 : 290.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}, other ARFs and ARF-like proteins.; ADP-ribosylation factor B1C (ARFB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor B1B (TAIR:AT5G17060.1); Has 12521 Blast hits to 12513 proteins in 459 species: Archae - 8; Bacteria - 10; Metazoa - 6191; Fungi - 1629; Plants - 2029; Viruses - 3; Other Eukaryotes - 2651 (source: NCBI BLink). & (p51821|arf1_chlre : 242.0) ADP-ribosylation factor 1 - Chlamydomonas reinhardtii & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"Kfl00455_0020","kfl00455_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00459_0030","kfl00459_0030_v1.1","Klebsormidium nitens","(at2g46100 : 150.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT3G04890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"Kfl00508_0020","kfl00508_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00529_0080","kfl00529_0080_v1.1","Klebsormidium nitens","(at3g43520 : 85.1) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT2G26240.1); Has 541 Blast hits to 527 proteins in 134 species: Archae - 4; Bacteria - 94; Metazoa - 236; Fungi - 13; Plants - 153; Viruses - 7; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"Kfl00531_0085","kfl00531_0085_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00541_0040","kfl00541_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00575_0070","kfl00575_0070_v1.1","Klebsormidium nitens","(at3g05420 : 141.0) Acyl-CoA binding protein with high affinity for   oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39610|dyha_chlre : 92.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00578_0020","kfl00578_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00580_0060","kfl00580_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00582_g4","kfl00582_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00611_0030","kfl00611_0030_v1.1","Klebsormidium nitens","(at2g17380 : 264.0) Encodes clathrin assembly protein AP19.; associated protein 19 (AP19); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, mitochondrion, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor AP1, sigma subunit (InterPro:IPR015604), Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1854 Blast hits to 1853 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 748; Fungi - 497; Plants - 257; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). & (o50016|ap2s1_maize : 150.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"Kfl00692_0040","kfl00692_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00717_0030","kfl00717_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00736_0030","kfl00736_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00759_0040","kfl00759_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00765_0030","kfl00765_0030_v1.1","Klebsormidium nitens","(at1g34770 : 128.0) CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00787_0040","kfl00787_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00801_0050","kfl00801_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00873_0050","kfl00873_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g02730","No alias","Oryza sativa","TAK14, putative, expressed","protein_coding"
"LOC_Os01g14610","No alias","Oryza sativa","PSF2 - Putative GINS complex subunit, expressed","protein_coding"
"LOC_Os01g14820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g14950","No alias","Oryza sativa","importin subunit alpha, putative, expressed","protein_coding"
"LOC_Os01g16210","No alias","Oryza sativa","uncharacterized Cys-rich domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g19548","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os01g41010","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding"
"LOC_Os01g46380","No alias","Oryza sativa","ketol-acid reductoisomerase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os01g46740","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g47900","No alias","Oryza sativa","S-locus-like receptor protein kinase, putative, expressed","protein_coding"
"LOC_Os01g49120","No alias","Oryza sativa","MATE efflux family protein, putative, expressed","protein_coding"
"LOC_Os01g54940","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding"
"LOC_Os01g55890","No alias","Oryza sativa","amino acid kinase, putative, expressed","protein_coding"
"LOC_Os01g58800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g16909","No alias","Oryza sativa","dynein light chain type 1 domain containing protein, expressed","protein_coding"
"LOC_Os02g23823","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os02g27220","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os02g37250","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os02g39040","No alias","Oryza sativa","mTERF domain containing protein, expressed","protein_coding"
"LOC_Os02g44104","No alias","Oryza sativa","F-box family protein, putative, expressed","protein_coding"
"LOC_Os02g45890","No alias","Oryza sativa","sulfotransferase domain containing protein, expressed","protein_coding"
"LOC_Os02g52460","No alias","Oryza sativa","zinc knuckle domain containing protein, expressed","protein_coding"
"LOC_Os02g55880","No alias","Oryza sativa","EF hand family protein, putative, expressed","protein_coding"
"LOC_Os03g03820","No alias","Oryza sativa","adenylate kinase, putative, expressed","protein_coding"
"LOC_Os03g04710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g07870","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g08000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g13000","No alias","Oryza sativa","GTP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g15600","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g22450","No alias","Oryza sativa","auxin response factor 75, putative, expressed","protein_coding"
"LOC_Os03g22890","No alias","Oryza sativa","GTPase of unknown function domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g30840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g56410","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g58330","No alias","Oryza sativa","BHLH transcription factor, putative, expressed","protein_coding"
"LOC_Os04g04030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g31804","No alias","Oryza sativa","OsMADS64 - MADS-box family gene with M-alpha type-box, expressed","protein_coding"
"LOC_Os04g35060","No alias","Oryza sativa","nicotinate phosphoribosyltransferase family domain containing protein, expressed","protein_coding"
"LOC_Os04g35930","No alias","Oryza sativa","OsFBX134 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os04g38330","No alias","Oryza sativa","radical SAM enzyme, putative, expressed","protein_coding"
"LOC_Os04g40300","No alias","Oryza sativa","transglutaminase, putative, expressed","protein_coding"
"LOC_Os04g42380","No alias","Oryza sativa","ribosomal protein S17, putative, expressed","protein_coding"
"LOC_Os04g50890","No alias","Oryza sativa","secretory carrier-associated membrane protein, putative, expressed","protein_coding"
"LOC_Os04g55520","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os04g56730","No alias","Oryza sativa","repressor of RNA polymerase III transcription MAF1, putative, expressed","protein_coding"
"LOC_Os05g04190","No alias","Oryza sativa","growth regulator related protein, putative, expressed","protein_coding"
"LOC_Os05g05030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g05320","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g14370","No alias","Oryza sativa","WRKY82, expressed","protein_coding"
"LOC_Os05g31160","No alias","Oryza sativa","peptide chain release factor 2, putative, expressed","protein_coding"
"LOC_Os05g32110","No alias","Oryza sativa","COBRA, putative, expressed","protein_coding"
"LOC_Os05g36160","No alias","Oryza sativa","G-box-binding factor 4, putative, expressed","protein_coding"
"LOC_Os05g37790","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g49160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g04530","No alias","Oryza sativa","OsClp9 - Putative Clp protease homologue, expressed","protein_coding"
"LOC_Os06g06470","No alias","Oryza sativa","U-box domain containing heat shock protein, putative, expressed","protein_coding"
"LOC_Os06g06900","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os06g09570","No alias","Oryza sativa","nucleolar GTP-binding protein 1, putative, expressed","protein_coding"
"LOC_Os06g40050","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os06g41920","No alias","Oryza sativa","EBNA-1, putative, expressed","protein_coding"
"LOC_Os06g50100","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g01920","No alias","Oryza sativa","nucleolar GTP-binding protein 1, putative, expressed","protein_coding"
"LOC_Os07g03260","No alias","Oryza sativa","CSLC10 - cellulose synthase-like family C, expressed","protein_coding"
"LOC_Os07g06820","No alias","Oryza sativa","serine/threonine-protein kinase RIO-like, putative, expressed","protein_coding"
"LOC_Os07g07670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g16320","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g25710","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os07g36470","No alias","Oryza sativa","vacuolar ATP synthase subunit H, putative, expressed","protein_coding"
"LOC_Os07g36590","No alias","Oryza sativa","serine/threonine-protein kinase receptor precursor, putative, expressed","protein_coding"
"LOC_Os07g37290","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g39070","No alias","Oryza sativa","5-formyltetrahydrofolate cyclo-ligase, putative, expressed","protein_coding"
"LOC_Os07g44970","No alias","Oryza sativa","XPA-binding protein 2, putative, expressed","protein_coding"
"LOC_Os07g47340","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g48510","No alias","Oryza sativa","thioredoxin, putative, expressed","protein_coding"
"LOC_Os08g07210","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g10608","No alias","Oryza sativa","ribosomal protein S17, putative, expressed","protein_coding"
"LOC_Os08g10730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g25799","No alias","Oryza sativa","Myb transcription factor, putative, expressed","protein_coding"
"LOC_Os08g31950","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g37040","No alias","Oryza sativa","gibberellin receptor GID1L2, putative, expressed","protein_coding"
"LOC_Os09g12750","No alias","Oryza sativa","Myb-like DNA-binding domain containing protein, putative, expressed","protein_coding"
"LOC_Os09g25990","No alias","Oryza sativa","glutamate receptor, putative, expressed","protein_coding"
"LOC_Os09g28810","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os09g33850","No alias","Oryza sativa","osFTL4  FT-Like4 homologous to Flowering Locus T  gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed","protein_coding"
"LOC_Os09g39670","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed","protein_coding"
"LOC_Os10g26130","No alias","Oryza sativa","phenylalanyl-tRNA synthetase, putative, expressed","protein_coding"
"LOC_Os10g26610","No alias","Oryza sativa","mandelonitrile lyase, putative, expressed","protein_coding"
"LOC_Os10g32060","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding"
"LOC_Os10g33275","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os10g33690","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os10g34350","No alias","Oryza sativa","aminotransferase, classes I and II, domain containing protein, expressed","protein_coding"
"LOC_Os10g35390","No alias","Oryza sativa","acyltransferase, putative, expressed","protein_coding"
"LOC_Os10g37880","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os11g05530","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g07940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g19800","No alias","Oryza sativa","Ras family domain containing protein, expressed","protein_coding"
"LOC_Os11g32500","No alias","Oryza sativa","rubredoxin family protein, putative, expressed","protein_coding"
"LOC_Os11g47830","No alias","Oryza sativa","RNA recognition motif containing protein, expressed","protein_coding"
"LOC_Os12g06670","No alias","Oryza sativa","protein kinase family protein, putative, expressed","protein_coding"
"LOC_Os12g13110","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os12g15420","No alias","Oryza sativa","nucampholin, putative, expressed","protein_coding"
"LOC_Os12g34850","No alias","Oryza sativa","Fibronectin type III domain containing protein, expressed","protein_coding"
"LOC_Os12g40490","No alias","Oryza sativa","LIM domain-containing protein, putative, expressed","protein_coding"
"LOC_Os12g41670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g43890","No alias","Oryza sativa","GNS1/SUR4 membrane family protein, putative, expressed","protein_coding"
"MA_10135775g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10187354g0010","No alias","Picea abies","(at4g35520 : 137.0) DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers; MUTL protein homolog 3 (MLH3); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, reciprocal meiotic recombination; LOCATED IN: chromosome; EXPRESSED IN: inflorescence; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein, N-terminal (InterPro:IPR014763), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein (InterPro:IPR002099), DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein, putative (TAIR:AT4G02460.1); Has 8909 Blast hits to 6784 proteins in 2360 species: Archae - 138; Bacteria - 6148; Metazoa - 581; Fungi - 681; Plants - 158; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"MA_10248111g0010","No alias","Picea abies","(at4g02420 : 122.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G02410.1); Has 115117 Blast hits to 113792 proteins in 4484 species: Archae - 103; Bacteria - 12860; Metazoa - 42338; Fungi - 9449; Plants - 33733; Viruses - 419; Other Eukaryotes - 16215 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"MA_102706g0010","No alias","Picea abies","(at5g21940 : 101.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"MA_104192g0010","No alias","Picea abies","(at4g23280 : 375.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 20 (CRK20); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, defense response, programmed cell death, response to salicylic acid stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 119459 Blast hits to 118018 proteins in 4463 species: Archae - 96; Bacteria - 13614; Metazoa - 44023; Fungi - 10123; Plants - 33901; Viruses - 397; Other Eukaryotes - 17305 (source: NCBI BLink). & (q8l4h4|nork_medtr : 218.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"MA_10425793g0010","No alias","Picea abies","(at1g06980 : 123.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"MA_10426487g0010","No alias","Picea abies","(at5g38510 : 103.0) Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 10 (TAIR:AT1G25290.2); Has 3625 Blast hits to 3625 proteins in 1267 species: Archae - 59; Bacteria - 2289; Metazoa - 237; Fungi - 114; Plants - 278; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"MA_10427079g0030","No alias","Picea abies","(at2g02040 : 751.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 1388.0) &  (original description: no original description)","protein_coding"
"MA_10428882g0010","No alias","Picea abies","(at2g02240 : 155.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"MA_10429258g0010","No alias","Picea abies","(at3g53570 : 552.0) a  member of a CDC2-related kinase subfamily,  the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40353|mmk2_medsa : 108.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (reliability: 1104.0) &  (original description: no original description)","protein_coding"
"MA_10430367g0020","No alias","Picea abies","(at3g21870 : 208.0) cyclin p2;1 (CYCP2;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1311 Blast hits to 1303 proteins in 220 species: Archae - 0; Bacteria - 18; Metazoa - 222; Fungi - 576; Plants - 231; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"MA_10430475g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10431132g0020","No alias","Picea abies","(at5g48150 : 211.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8gve1|cigr2_orysa : 201.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"MA_10432550g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10432948g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435541g0010","No alias","Picea abies","(at2g31140 : 223.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06200.1); Has 227 Blast hits to 227 proteins in 70 species: Archae - 0; Bacteria - 14; Metazoa - 22; Fungi - 48; Plants - 131; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"MA_10436211g0010","No alias","Picea abies","(at1g54050 : 114.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 4491 Blast hits to 4491 proteins in 1181 species: Archae - 166; Bacteria - 2520; Metazoa - 2; Fungi - 140; Plants - 1242; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink). & (p46516|hsp21_helan : 103.0) 17.9 kDa class II heat shock protein - Helianthus annuus (Common sunflower) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"MA_110832g0010","No alias","Picea abies","(at4g12420 : 830.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5  similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 534.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (reliability: 1660.0) &  (original description: no original description)","protein_coding"
"MA_118036g0010","No alias","Picea abies","(at1g03100 : 544.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G17616.1); Has 9904 Blast hits to 5133 proteins in 176 species: Archae - 0; Bacteria - 34; Metazoa - 111; Fungi - 31; Plants - 9502; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q76c99|rf1_orysa : 82.8) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1088.0) &  (original description: no original description)","protein_coding"
"MA_12652g0010","No alias","Picea abies","(at3g27090 : 273.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G42050.1); Has 746 Blast hits to 671 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (p37707|b2_dauca : 265.0) B2 protein - Daucus carota (Carrot) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"MA_126865g0010","No alias","Picea abies","(p31251|ube12_wheat : 135.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 132.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"MA_128052g0010","No alias","Picea abies","(at3g53700 : 269.0) maternal effect embryo arrest 40 (MEE40); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 58723 Blast hits to 15213 proteins in 321 species: Archae - 6; Bacteria - 72; Metazoa - 992; Fungi - 1450; Plants - 53933; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink). & (q76c99|rf1_orysa : 235.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"MA_129800g0010","No alias","Picea abies","(at1g27170 : 178.0) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"MA_13154g0010","No alias","Picea abies","(at5g07980 : 82.0) dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07940.2); Has 1336 Blast hits to 783 proteins in 174 species: Archae - 4; Bacteria - 291; Metazoa - 248; Fungi - 128; Plants - 141; Viruses - 0; Other Eukaryotes - 524 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"MA_138256g0010","No alias","Picea abies","(at1g30650 : 163.0) member of WRKY Transcription Factor; Group II-e; WRKY DNA-binding protein 14 (WRKY14); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 35 (TAIR:AT2G34830.1); Has 3350 Blast hits to 2895 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 12; Plants - 3273; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"MA_139905g0010","No alias","Picea abies","(at1g66080 : 219.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF775 (InterPro:IPR008493); Has 285 Blast hits to 283 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"MA_141855g0010","No alias","Picea abies","(at4g02750 : 530.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 158.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"MA_158457g0010","No alias","Picea abies","(q5qm99|rl37a_orysa : 183.0) 60S ribosomal protein L37a - Oryza sativa (Rice) & (at3g60245 : 176.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G10950.1); Has 1052 Blast hits to 1052 proteins in 365 species: Archae - 290; Bacteria - 0; Metazoa - 325; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"MA_16752g0030","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_175298g0010","No alias","Picea abies","(at5g39660 : 214.0) Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.; cycling DOF factor 2 (CDF2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24463|pbf_maize : 97.1) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"MA_1806g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_181986g0010","No alias","Picea abies","(at3g04030 : 271.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"MA_181g0010","No alias","Picea abies","(at5g09430 : 265.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"MA_18708g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_189315g0010","No alias","Picea abies","(at3g52950 : 230.0) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"MA_19630g0020","No alias","Picea abies","(at4g24660 : 102.0) homeobox protein 22 (HB22); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 25 (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 490; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"MA_201267g0010","No alias","Picea abies","(at2g04910 : 98.6) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT5G35740.1); Has 1314 Blast hits to 1266 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 188.8) &  (original description: no original description)","protein_coding"
"MA_209006g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_218022g0010","No alias","Picea abies","(at1g24485 : 87.4) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: protein kinase-related (TAIR:AT3G46280.1); Has 1310 Blast hits to 1260 proteins in 183 species: Archae - 0; Bacteria - 258; Metazoa - 162; Fungi - 42; Plants - 688; Viruses - 16; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"MA_23866g0010","No alias","Picea abies","(at1g79770 : 105.0) Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT5G25840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"MA_242725g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_276407g0010","No alias","Picea abies","(at1g69550 : 114.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"MA_280817g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_281725g0010","No alias","Picea abies","(at4g13830 : 91.3) DnaJ-like protein (J20); nuclear gene; DNAJ-like 20 (J20); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 22791 Blast hits to 22789 proteins in 3231 species: Archae - 176; Bacteria - 9466; Metazoa - 3791; Fungi - 2164; Plants - 2102; Viruses - 8; Other Eukaryotes - 5084 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"MA_326239g0010","No alias","Picea abies","(at5g53160 : 272.0) Encodes RCAR3, a regulatory component of ABA receptor.  Interacts with protein phosphatase 2Cs ABI1 and ABI2.  Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"MA_34255g0010","No alias","Picea abies","(at1g18950 : 234.0) DDT domain superfamily; CONTAINS InterPro DOMAIN/s: DDT domain (InterPro:IPR004022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25580.1); Has 20293 Blast hits to 13585 proteins in 823 species: Archae - 41; Bacteria - 1919; Metazoa - 8043; Fungi - 2539; Plants - 1031; Viruses - 220; Other Eukaryotes - 6500 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"MA_35335g0010","No alias","Picea abies","(at5g13240 : 220.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"MA_365769g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_39898g0010","No alias","Picea abies","(at3g09780 : 681.0) CRINKLY4 related 1 (CCR1); FUNCTIONS IN: protein serine/threonine kinase activity, receptor activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: TNFR/CD27/30/40/95 cysteine-rich region (InterPro:IPR001368), Protein kinase, ATP binding site (InterPro:IPR017441), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 2 (TAIR:AT2G39180.1); Has 92283 Blast hits to 90862 proteins in 3897 species: Archae - 88; Bacteria - 8648; Metazoa - 34704; Fungi - 6843; Plants - 29398; Viruses - 212; Other Eukaryotes - 12390 (source: NCBI BLink). & (o24585|cri4_maize : 407.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1362.0) &  (original description: no original description)","protein_coding"
"MA_41471g0010","No alias","Picea abies","(at4g32480 : 147.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"MA_44185g0010","No alias","Picea abies","(at5g25830 : 135.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"MA_47673g0010","No alias","Picea abies","(at5g11950 : 323.0) Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210.; Putative lysine decarboxylase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"MA_484764g0010","No alias","Picea abies","(at5g54570 : 706.0) beta glucosidase 41 (BGLU41); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p49235|bglc_maize : 411.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1412.0) &  (original description: no original description)","protein_coding"
"MA_509g0010","No alias","Picea abies",""(at2g45510 : 338.0) member of CYP704A; ""cytochrome P450, family 704, subfamily A, polypeptide 2"" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (o48921|c97b2_soybn : 80.9) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 676.0) &  (original description: no original description)"","protein_coding"
"MA_52511g0010","No alias","Picea abies","(at1g48960 : 99.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"MA_5364g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_56000g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_5637g0010","No alias","Picea abies","(at4g35160 : 92.8) O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT4G35150.1); Has 3345 Blast hits to 3334 proteins in 568 species: Archae - 3; Bacteria - 935; Metazoa - 112; Fungi - 688; Plants - 1514; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (p47917|zrp4_maize : 83.6) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) - Zea mays (Maize) & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"MA_567674g0010","No alias","Picea abies","(at4g32480 : 157.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"MA_568538g0010","No alias","Picea abies","(o49813|olee1_betve : 91.3) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at5g45880 : 90.1) Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular space, endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041), Allergen Ole e 1, conserved site (InterPro:IPR006040); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT4G18596.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"MA_5g0010","No alias","Picea abies","(at4g05160 : 365.0) Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0,  C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.; AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity, fatty-acyl-CoA synthase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 86858 Blast hits to 79133 proteins in 3797 species: Archae - 1159; Bacteria - 54259; Metazoa - 3570; Fungi - 4802; Plants - 2877; Viruses - 1; Other Eukaryotes - 20190 (source: NCBI BLink). & (p14912|4cl1_petcr : 206.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"MA_60015g0010","No alias","Picea abies","(at1g71865 : 84.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"MA_6382703g0010","No alias","Picea abies","(at1g69550 : 99.8) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"MA_75222g0010","No alias","Picea abies","(at1g68490 : 99.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"MA_75571g0010","No alias","Picea abies","(at2g43340 : 142.0) Protein of unknown function (DUF1685); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT2G31560.2); Has 272 Blast hits to 272 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"MA_762g0010","No alias","Picea abies","(at1g14190 : 327.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G14185.1); Has 12034 Blast hits to 11141 proteins in 1120 species: Archae - 6; Bacteria - 4075; Metazoa - 1036; Fungi - 1877; Plants - 336; Viruses - 6; Other Eukaryotes - 4698 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"MA_76906g0010","No alias","Picea abies","(at5g13240 : 234.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"MA_7909094g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_84751g0010","No alias","Picea abies","(at5g39710 : 209.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 194.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"MA_91482g0010","No alias","Picea abies","(at4g10770 : 316.0) oligopeptide transporter; oligopeptide transporter 7 (OPT7); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"MA_956503g0010","No alias","Picea abies","(at2g02240 : 167.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"MA_959216g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"Mp1g08160.1","No alias","Marchantia polymorpha","component RPP2 of LSU proteome component","protein_coding"
"Mp1g24520.1","No alias","Marchantia polymorpha","component SNAPC4 of SNAP snRNA transcription factor complex. transcription factor (MYB)","protein_coding"
"Mp1g25640.1","No alias","Marchantia polymorpha","tetra-acyl-disaccharide kinase (LpxK)","protein_coding"
"Mp1g25710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26920.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g08900.1","No alias","Marchantia polymorpha","component BLOS2 of BLOC-1 endosome-to-vacuole sorting complex","protein_coding"
"Mp2g15200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g07880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g22870.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g23550.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g15400.1","No alias","Marchantia polymorpha","component KAE1 of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"Mp4g19900.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding"
"Mp4g20180.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana (sp|q8gy84|rh10_arath : 541.0)","protein_coding"
"Mp4g20580.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g08890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g10260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g03790.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g06510.1","No alias","Marchantia polymorpha","component RPS15a of SSU proteome","protein_coding"
"Mp8g11870.1","No alias","Marchantia polymorpha","transcription factor (MYB)","protein_coding"
"Mp8g14130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Potri.010G097400","No alias","Populus trichocarpa","zinc knuckle (CCHC-type) family protein","protein_coding"
"Potri.010G115800","No alias","Populus trichocarpa","transcription regulators","protein_coding"
"Potri.014G117400","No alias","Populus trichocarpa","myb-like transcription factor family protein","protein_coding"
"Pp1s100_87V6","No alias","Physcomitrella patens","short-chain dehydrogenase reductase sdr","protein_coding"
"Pp1s100_92V6","No alias","Physcomitrella patens","emb2016 (embryo defective 2016)","protein_coding"
"Pp1s105_83V6","No alias","Physcomitrella patens","aspartate glutamate uridylate kinase family protein","protein_coding"
"Pp1s106_12V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s106_50V6","No alias","Physcomitrella patens","pap associated domain containing 5","protein_coding"
"Pp1s10_132V6","No alias","Physcomitrella patens","imbibition protein homolog","protein_coding"
"Pp1s10_29V6","No alias","Physcomitrella patens","CG8181; CG8181 gene product from transcript CG8181-RA [Drosophila melanogaster]","protein_coding"
"Pp1s112_154V6","No alias","Physcomitrella patens","zinc finger protein constans-like 16","protein_coding"
"Pp1s112_37V6","No alias","Physcomitrella patens","unknown [Zea mays]","protein_coding"
"Pp1s114_185V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s118_140V6","No alias","Physcomitrella patens","nol1 nop2 sun domain member 6","protein_coding"
"Pp1s11_175V6","No alias","Physcomitrella patens","alpha-glucosidase i","protein_coding"
"Pp1s11_376V6","No alias","Physcomitrella patens","early responsive to dehydration protein","protein_coding"
"Pp1s11_43V6","No alias","Physcomitrella patens","nucleic acid binding","protein_coding"
"Pp1s121_69V6","No alias","Physcomitrella patens","leucine-rich repeat protein kinase","protein_coding"
"Pp1s122_54V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s128_120V6","No alias","Physcomitrella patens","trna aspartic acid methyltransferase 1","protein_coding"
"Pp1s128_154V6","No alias","Physcomitrella patens","atp-dependent clp protease proteolytic subunit","protein_coding"
"Pp1s131_128V6","No alias","Physcomitrella patens","myosin xi-f","protein_coding"
"Pp1s131_142V6","No alias","Physcomitrella patens","cell division control protein 15","protein_coding"
"Pp1s133_57V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s134_56V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s135_47V6","No alias","Physcomitrella patens","3-5 exonuclease nucleic acid binding protein","protein_coding"
"Pp1s138_71V6","No alias","Physcomitrella patens","zinc finger","protein_coding"
"Pp1s13_14V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s145_99V6","No alias","Physcomitrella patens","F3I6.25; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s149_51V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s14_434V6","No alias","Physcomitrella patens","PREDICTED: hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s155_61V6","No alias","Physcomitrella patens","acyl- thioesterase ii","protein_coding"
"Pp1s157_87V6","No alias","Physcomitrella patens","ribonucleic acid binding protein","protein_coding"
"Pp1s159_132V6","No alias","Physcomitrella patens","T9A14.80; phosphorylase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s159_52V6","No alias","Physcomitrella patens","phosphoenolpyruvate carboxykinase","protein_coding"
"Pp1s15_215V6","No alias","Physcomitrella patens","T8M16.240; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s15_288V6","No alias","Physcomitrella patens","sterol c-14 reductase","protein_coding"
"Pp1s15_446V6","No alias","Physcomitrella patens","hypothetical protein, conserved [Cyanidioschyzon merolae]","protein_coding"
"Pp1s161_106V6","No alias","Physcomitrella patens","seven transmembrane domain protein","protein_coding"
"Pp1s166_114V6","No alias","Physcomitrella patens","F24D13.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s167_124V6","No alias","Physcomitrella patens","anthocyanin transcriptional regulator","protein_coding"
"Pp1s169_130V6","No alias","Physcomitrella patens","homoserine kinase","protein_coding"
"Pp1s169_76V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s173_42V6","No alias","Physcomitrella patens","receptor-like kinase","protein_coding"
"Pp1s183_114V6","No alias","Physcomitrella patens","hypothetical protein [Cyanidioschyzon merolae]","protein_coding"
"Pp1s183_22V6","No alias","Physcomitrella patens","set domain protein","protein_coding"
"Pp1s188_89V6","No alias","Physcomitrella patens","atp-binding cassette superfamily","protein_coding"
"Pp1s189_99V6","No alias","Physcomitrella patens","ornithine carbamoyltransferase","protein_coding"
"Pp1s191_76V6","No alias","Physcomitrella patens","single-strand binding protein","protein_coding"
"Pp1s19_313V6","No alias","Physcomitrella patens","brd7-prov; brd7-prov protein [Xenopus tropicalis]","protein_coding"
"Pp1s19_89V6","No alias","Physcomitrella patens","F2N1.34; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s1_183V6","No alias","Physcomitrella patens","membrane bound o-acyl transferase family protein","protein_coding"
"Pp1s1_765V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s207_1V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s207_52V6","No alias","Physcomitrella patens","T31B5.60; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s209_120V6","No alias","Physcomitrella patens","pre-mrna splicing factor prp38 family protein","protein_coding"
"Pp1s215_25V6","No alias","Physcomitrella patens","yer007c-ap mct-1 like pua rna binding domain containing protein","protein_coding"
"Pp1s215_83V6","No alias","Physcomitrella patens","fk506 binding","protein_coding"
"Pp1s217_26V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s218_13V6","No alias","Physcomitrella patens","RNA-directed RNA polymerase","protein_coding"
"Pp1s218_3V6","No alias","Physcomitrella patens","MCO15.13; glycosyl hydrolase family 17 [Arabidopsis thaliana]","protein_coding"
"Pp1s21_397V6","No alias","Physcomitrella patens","LOC472495; similar to hypothetical protein FLJ35834 [Pan troglodytes]","protein_coding"
"Pp1s224_71V6","No alias","Physcomitrella patens","DHX8; DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Pan troglodytes]","protein_coding"
"Pp1s237_18V6","No alias","Physcomitrella patens","chromosome-associated kinesin","protein_coding"
"Pp1s246_70V6","No alias","Physcomitrella patens","leucine-rich repeat-containing","protein_coding"
"Pp1s249_95V6","No alias","Physcomitrella patens","T27F4.17; pfkB-type carbohydrate kinase family protein [EC:2.7.1.4] [KO:K00847] [Arabidopsis thaliana]","protein_coding"
"Pp1s260_24V6","No alias","Physcomitrella patens","threonine synthase","protein_coding"
"Pp1s260_29V6","No alias","Physcomitrella patens","tousled-like kinase 2","protein_coding"
"Pp1s266_48V6","No alias","Physcomitrella patens","structural constituent of","protein_coding"
"Pp1s26_114V6","No alias","Physcomitrella patens","ring finger","protein_coding"
"Pp1s270_51V6","No alias","Physcomitrella patens","2-oxoglutarate e1 subunit","protein_coding"
"Pp1s275_73V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s279_37V6","No alias","Physcomitrella patens","multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase","protein_coding"
"Pp1s27_322V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s283_79V6","No alias","Physcomitrella patens","F28J12.260; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s28_230V6","No alias","Physcomitrella patens","dna methyltransferase 1-associated protein 1","protein_coding"
"Pp1s28_266V6","No alias","Physcomitrella patens","dna replication licensing factor","protein_coding"
"Pp1s291_20V6","No alias","Physcomitrella patens","chromodomain-helicase-dna-binding protein","protein_coding"
"Pp1s296_69V6","No alias","Physcomitrella patens","ethylene-responsive transcription","protein_coding"
"Pp1s2_113V6","No alias","Physcomitrella patens","methionine gamma-lyase","protein_coding"
"Pp1s2_131V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s2_272V6","No alias","Physcomitrella patens","F11F8.14; lipin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s307_72V6","No alias","Physcomitrella patens","radical sam cfr family","protein_coding"
"Pp1s30_350V6","No alias","Physcomitrella patens","F2K13.30; TOM (target of myb1) -related protein [Arabidopsis thaliana]","protein_coding"
"Pp1s313_65V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s31_110V6","No alias","Physcomitrella patens","at3g32930-like protein","protein_coding"
"Pp1s31_142V6","No alias","Physcomitrella patens","nudix type motif 22","protein_coding"
"Pp1s31_214V6","No alias","Physcomitrella patens","T31B5.60; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s31_393V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s327_12V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s327_52V6","No alias","Physcomitrella patens","T27C4.14; exportin-related [Arabidopsis thaliana]","protein_coding"
"Pp1s33_272V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s355_8V6","No alias","Physcomitrella patens","tpr repeat-containing protein","protein_coding"
"Pp1s36_277V6","No alias","Physcomitrella patens","pof1; F-box protein [KO:K03362] [Schizosaccharomyces pombe]","protein_coding"
"Pp1s373_1V6","No alias","Physcomitrella patens","uridylate kinase","protein_coding"
"Pp1s385_25V6","No alias","Physcomitrella patens","Light-sensor Protein kinase [Includes: Phytochrome; Protein kinase ] [Ceratodon purpureus]","protein_coding"
"Pp1s38_275V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s38_61V6","No alias","Physcomitrella patens","malonyl- decarboxylase","protein_coding"
"Pp1s39_109V6","No alias","Physcomitrella patens","serine threonine protein","protein_coding"
"Pp1s39_251V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s408_25V6","No alias","Physcomitrella patens","integrator complex subunit 7","protein_coding"
"Pp1s40_297V6","No alias","Physcomitrella patens","60s ribosomal protein l10a-1","protein_coding"
"Pp1s41_278V6","No alias","Physcomitrella patens","MIL23.20; protein kinase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s41_53V6","No alias","Physcomitrella patens","rrna methylase family protein","protein_coding"
"Pp1s425_16V6","No alias","Physcomitrella patens","acid phosphatase survival protein","protein_coding"
"Pp1s433_8V6","No alias","Physcomitrella patens","MAC9.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s46_217V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s494_7V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s49_225V6","No alias","Physcomitrella patens","copine family protein","protein_coding"
"Pp1s49_29V6","No alias","Physcomitrella patens","regulator of gluconeogenesis","protein_coding"
"Pp1s51_318V6","No alias","Physcomitrella patens","transcription factor hap5a","protein_coding"
"Pp1s52_58V6","No alias","Physcomitrella patens","gamma complex associated protein 5","protein_coding"
"Pp1s53_243V6","No alias","Physcomitrella patens","T8M16.240; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s53_93V6","No alias","Physcomitrella patens","serine threonine kinase 36partial","protein_coding"
"Pp1s55_141V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit n-methyltransferase i","protein_coding"
"Pp1s55_224V6","No alias","Physcomitrella patens","T24C20.110; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s58_200V6","No alias","Physcomitrella patens","lon peptidase peroxisomal","protein_coding"
"Pp1s59_95V6","No alias","Physcomitrella patens","F28A23.140; zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s61_131V6","No alias","Physcomitrella patens","acyltransferase like 1","protein_coding"
"Pp1s64_180V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s67_194V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s68_169V6","No alias","Physcomitrella patens","arogenate prephenate dehydratase","protein_coding"
"Pp1s6_134V6","No alias","Physcomitrella patens","tiny-like protein","protein_coding"
"Pp1s70_244V6","No alias","Physcomitrella patens","y3972_arath ame: full=uncharacterized protein at3g49720","protein_coding"
"Pp1s72_111V6","No alias","Physcomitrella patens","cystathionine beta-lyase","protein_coding"
"Pp1s75_36V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s79_21V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s7_148V6","No alias","Physcomitrella patens","general transcription factor polypeptide 34kda","protein_coding"
"Pp1s7_190V6","No alias","Physcomitrella patens","dna methyltransferase 1-associated protein 1","protein_coding"
"Pp1s7_387V6","No alias","Physcomitrella patens","component of scar regulatory complex","protein_coding"
"Pp1s81_214V6","No alias","Physcomitrella patens","HYPOTHETICAL PROLINE-RICH PROTEIN [Owenia fusiformis]","protein_coding"
"Pp1s82_153V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s87_110V6","No alias","Physcomitrella patens","zinc finger","protein_coding"
"Pp1s89_128V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s90_146V6","No alias","Physcomitrella patens","uncharacterized protein c14orf102 homolog","protein_coding"
"Pp1s90_244V6","No alias","Physcomitrella patens","cellulose synthase","protein_coding"
"Pp1s90_25V6","No alias","Physcomitrella patens","PREDICTED: hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s96_157V6","No alias","Physcomitrella patens","conserved hypothetical membrane protein","protein_coding"
"Pp1s9_247V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"PSME_00000106-RA","No alias","Pseudotsuga menziesii","(at3g13220 : 667.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (q8s628|pdr13_orysa : 179.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 1334.0) &  (original description: no original description)","protein_coding"
"PSME_00000415-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 322.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"PSME_00000765-RA","No alias","Pseudotsuga menziesii","(at1g19270 : 206.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00000986-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001256-RA","No alias","Pseudotsuga menziesii","(at3g51430 : 194.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00001273-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001380-RA","No alias","Pseudotsuga menziesii","(at5g53950 : 248.0) Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM.  Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.; CUP-SHAPED COTYLEDON 2 (CUC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G15170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 201.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"PSME_00001448-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001573-RA","No alias","Pseudotsuga menziesii","(at5g05140 : 98.2) Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT3G10820.2); Has 741 Blast hits to 730 proteins in 116 species: Archae - 0; Bacteria - 16; Metazoa - 377; Fungi - 33; Plants - 253; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"PSME_00001735-RA","No alias","Pseudotsuga menziesii","(at4g18910 : 274.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 262.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"PSME_00001851-RA","No alias","Pseudotsuga menziesii","(at3g44190 : 367.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"PSME_00001852-RA","No alias","Pseudotsuga menziesii","(at3g44190 : 406.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink). & (reliability: 812.0) &  (original description: no original description)","protein_coding"
"PSME_00001997-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002541-RA","No alias","Pseudotsuga menziesii","(at3g19700 : 306.0) Encodes leucine rich repeat (LRR) kinase.  Iku2-3 identified in a screen for mutants with abnormal endosperm. Sporophytic recessive mutants have reduced embryo and endosperm size. Seed size is also reduced and the shape is abnormal suggesting an interaction between the endosperm and cell elongation in the integuments.; HAIKU2 (IKU2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, endosperm development; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 212277 Blast hits to 140483 proteins in 4652 species: Archae - 172; Bacteria - 21845; Metazoa - 68496; Fungi - 11129; Plants - 84909; Viruses - 459; Other Eukaryotes - 25267 (source: NCBI BLink). & (p93194|rpk1_iponi : 197.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00002626-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 162.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00002678-RA","No alias","Pseudotsuga menziesii","(p34800|ccn1_antma : 314.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at3g11520 : 304.0) Encodes a B-type mitotic cyclin.; CYCLIN B1;3 (CYCB1;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle, response to cyclopentenone, cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 4455 Blast hits to 4454 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 2045; Fungi - 567; Plants - 1152; Viruses - 37; Other Eukaryotes - 654 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"PSME_00002715-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 127.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 126.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00002780-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 283.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (p28038|fl3h_horvu : 169.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Hordeum vulgare (Barley) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00002813-RA","No alias","Pseudotsuga menziesii","(at1g21240 : 140.0) encodes a wall-associated kinase; wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00002852-RA","No alias","Pseudotsuga menziesii","(at4g23160 : 135.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"PSME_00002855-RA","No alias","Pseudotsuga menziesii","(at4g23180 : 288.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 178.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00003396-RA","No alias","Pseudotsuga menziesii","(at4g16260 : 263.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (p07979|gub_nicpl : 244.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"PSME_00003569-RA","No alias","Pseudotsuga menziesii",""(at4g17970 : 135.0) Anion transporter involved  in stomatal closure. Gene has 3 splicing variants.; ""aluminum-activated, malate transporter 12"" (ALMT12); CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT5G46610.1); Has 747 Blast hits to 732 proteins in 202 species: Archae - 0; Bacteria - 352; Metazoa - 0; Fungi - 13; Plants - 354; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)"","protein_coding"
"PSME_00003909-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 172.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00004114-RA","No alias","Pseudotsuga menziesii","(at5g55860 : 94.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00004292-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004460-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004712-RA","No alias","Pseudotsuga menziesii","(at1g76140 : 1049.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2098.0) &  (original description: no original description)","protein_coding"
"PSME_00004773-RA","No alias","Pseudotsuga menziesii","(at3g26120 : 164.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q27k34|pla2_orysa : 118.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00004822-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004828-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 573.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"PSME_00004865-RA","No alias","Pseudotsuga menziesii","(at1g65730 : 848.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1534.0) &  (original description: no original description)","protein_coding"
"PSME_00005011-RA","No alias","Pseudotsuga menziesii","(at2g37050 : 250.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 176.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00005548-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 93.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00005780-RA","No alias","Pseudotsuga menziesii","(q9slx0|ima1b_orysa : 90.1) Importin alpha-1b subunit - Oryza sativa (Rice) & (at3g06720 : 83.2) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"PSME_00005981-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 1026.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (o23826|k125_tobac : 235.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 2052.0) &  (original description: no original description)","protein_coding"
"PSME_00006038-RA","No alias","Pseudotsuga menziesii","(at3g08720 : 159.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl).  Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"PSME_00006073-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00006159-RA","No alias","Pseudotsuga menziesii","(at3g46790 : 260.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00006339-RA","No alias","Pseudotsuga menziesii","(at4g28730 : 102.0) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G20270.1); Has 4412 Blast hits to 4405 proteins in 1169 species: Archae - 6; Bacteria - 1982; Metazoa - 422; Fungi - 333; Plants - 692; Viruses - 111; Other Eukaryotes - 866 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"PSME_00006539-RA","No alias","Pseudotsuga menziesii","(at1g35470 : 153.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), SPla/RYanodine receptor SPRY (InterPro:IPR003877), Ran binding protein, CRA domain (InterPro:IPR019589), SPla/RYanodine receptor subgroup (InterPro:IPR018355), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00006667-RA","No alias","Pseudotsuga menziesii","(at3g14360 : 397.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"PSME_00006699-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 244.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (o49923|adk_phypa : 156.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00006714-RA","No alias","Pseudotsuga menziesii","(at1g20720 : 268.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20750.1); Has 2863 Blast hits to 2328 proteins in 675 species: Archae - 243; Bacteria - 679; Metazoa - 737; Fungi - 397; Plants - 210; Viruses - 5; Other Eukaryotes - 592 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00006795-RA","No alias","Pseudotsuga menziesii","(at5g22020 : 205.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase-like 3 (TAIR:AT1G08470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p18417|stsy_catro : 86.3) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"PSME_00006990-RA","No alias","Pseudotsuga menziesii","(at1g15750 : 906.0) Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus.  Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis.  The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.; TOPLESS (TPL); FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 (TAIR:AT1G80490.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1812.0) &  (original description: no original description)","protein_coding"
"PSME_00007222-RA","No alias","Pseudotsuga menziesii","(at1g09760 : 152.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00007292-RA","No alias","Pseudotsuga menziesii","(at4g13930 : 407.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (p34899|glym_pea : 251.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"PSME_00007405-RA","No alias","Pseudotsuga menziesii","(q8lkz1|nork_pea : 90.9) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at1g67720 : 84.7) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"PSME_00007638-RA","No alias","Pseudotsuga menziesii","(at1g08230 : 509.0) Transmembrane amino acid transporter family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G41800.1); Has 2686 Blast hits to 2681 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 558; Fungi - 296; Plants - 1464; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). & (reliability: 1018.0) &  (original description: no original description)","protein_coding"
"PSME_00007661-RA","No alias","Pseudotsuga menziesii","(at3g62240 : 207.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00007681-RA","No alias","Pseudotsuga menziesii","(at1g80760 : 329.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (p08995|no26_soybn : 230.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00007693-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 81.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"PSME_00007745-RA","No alias","Pseudotsuga menziesii","(at5g08390 : 652.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 114222 Blast hits to 41452 proteins in 998 species: Archae - 86; Bacteria - 11863; Metazoa - 46637; Fungi - 24709; Plants - 15354; Viruses - 6; Other Eukaryotes - 15567 (source: NCBI BLink). & (p93107|pf20_chlre : 110.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"PSME_00007778-RA","No alias","Pseudotsuga menziesii","(at2g17260 : 257.0) Encodes a glutamate receptor. Involved in calcium-programmed stomatal closure.; glutamate receptor 2 (GLR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, stomatal movement; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT4G35290.1); Has 6275 Blast hits to 6137 proteins in 506 species: Archae - 28; Bacteria - 848; Metazoa - 4591; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (q7xp59|glr31_orysa : 219.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"PSME_00007842-RA","No alias","Pseudotsuga menziesii","(p29449|trxh1_tobac : 94.0) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (at3g51030 : 90.1) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"PSME_00007869-RA","No alias","Pseudotsuga menziesii","(p49296|acea_cucsa : 825.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Cucumis sativus (Cucumber) & (at3g21720 : 803.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (reliability: 1606.0) &  (original description: no original description)","protein_coding"
"PSME_00008030-RA","No alias","Pseudotsuga menziesii","(at5g12030 : 128.0) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.; heat shock protein 17.6A (HSP17.6A); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: 17.6 kDa class II heat shock protein (TAIR:AT5G12020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q01545|hsp22_iponi : 124.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"PSME_00008045-RA","No alias","Pseudotsuga menziesii","(at5g38710 : 308.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00008073-RA","No alias","Pseudotsuga menziesii","(at2g38080 : 619.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (p24792|aso_cucma : 245.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00008219-RA","No alias","Pseudotsuga menziesii","(at1g20610 : 211.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (p30278|ccnb2_medsa : 196.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00008300-RA","No alias","Pseudotsuga menziesii","(at3g48000 : 203.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (p17202|badh_spiol : 99.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00008359-RA","No alias","Pseudotsuga menziesii","(at5g02050 : 139.0) Mitochondrial glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 498 Blast hits to 497 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 134; Plants - 219; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00008409-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 142.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00008568-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 419.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"PSME_00008845-RA","No alias","Pseudotsuga menziesii","(q5z627|ef1g3_orysa : 615.0) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma 3) - Oryza sativa (Rice) & (at1g57720 : 601.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: copper ion binding, translation elongation factor activity; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: cell wall, plasma membrane, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G09640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1202.0) &  (original description: no original description)","protein_coding"
"PSME_00008902-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 371.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 742.0) &  (original description: no original description)","protein_coding"
"PSME_00009103-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 216.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00009162-RA","No alias","Pseudotsuga menziesii","(at1g14020 : 193.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"PSME_00009213-RA","No alias","Pseudotsuga menziesii","(p53684|cdpk3_orysa : 230.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (at3g10660 : 226.0) predicted to encode calcium-dependent  protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal,  to A prevented the meristoylation .  The G to A mutation decreased AtCPK2 membrane association by approximately 50%.; calmodulin-domain protein kinase cdpk isoform 2 (CPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 145304 Blast hits to 132515 proteins in 4265 species: Archae - 224; Bacteria - 17128; Metazoa - 53382; Fungi - 18632; Plants - 28672; Viruses - 609; Other Eukaryotes - 26657 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00009561-RA","No alias","Pseudotsuga menziesii","(at2g21620 : 82.4) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"PSME_00009662-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009689-RA","No alias","Pseudotsuga menziesii","(at5g13240 : 231.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00009801-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009951-RA","No alias","Pseudotsuga menziesii","(at5g40380 : 208.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 132.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00010119-RA","No alias","Pseudotsuga menziesii","(at5g57320 : 130.0) villin, putative; FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 4 (TAIR:AT4G30160.1); Has 3179 Blast hits to 2033 proteins in 206 species: Archae - 0; Bacteria - 16; Metazoa - 2271; Fungi - 140; Plants - 219; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00010124-RA","No alias","Pseudotsuga menziesii","(q6yuu5|mdr_orysa : 355.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (at3g28345 : 352.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"PSME_00010142-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 502.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 362.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1004.0) &  (original description: no original description)","protein_coding"
"PSME_00010271-RA","No alias","Pseudotsuga menziesii","(at5g05390 : 664.0) putative laccase,  a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 247.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1328.0) &  (original description: no original description)","protein_coding"
"PSME_00010554-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 94.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g15500 : 91.7) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"PSME_00010966-RA","No alias","Pseudotsuga menziesii","(at2g25220 : 102.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.1). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"PSME_00010994-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011072-RA","No alias","Pseudotsuga menziesii","(at5g10980 : 145.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 145.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00011231-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 239.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"PSME_00011384-RA","No alias","Pseudotsuga menziesii","(at5g13240 : 129.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription from RNA polymerase III promoter; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Maf1 regulator (InterPro:IPR015257), RNA polymerase III transcriptional repressor, MAF1 (InterPro:IPR017152); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00011388-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 338.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (o82150|ftsh_tobac : 248.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00011518-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011828-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 426.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (q09131|ppaf_soybn : 179.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"PSME_00011947-RA","No alias","Pseudotsuga menziesii","(at4g01130 : 217.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 167.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"PSME_00012127-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 85.9) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"PSME_00012147-RA","No alias","Pseudotsuga menziesii","(at3g22590 : 262.0) Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).; PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"PSME_00012261-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 323.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00012373-RA","No alias","Pseudotsuga menziesii","(at2g41380 : 245.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00012442-RA","No alias","Pseudotsuga menziesii","(at5g63320 : 287.0) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00012572-RA","No alias","Pseudotsuga menziesii","(at3g54140 : 824.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter  5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (reliability: 1648.0) &  (original description: no original description)","protein_coding"
"PSME_00012609-RA","No alias","Pseudotsuga menziesii","(at5g20490 : 135.0) Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.; XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00013019-RA","No alias","Pseudotsuga menziesii","(at5g20320 : 134.0) Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling.  It binds DRB4, a ds-RNA binding protein.; dicer-like 4 (DCL4); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 2 (TAIR:AT3G03300.3). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00013219-RA","No alias","Pseudotsuga menziesii","(at5g64270 : 245.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00013300-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00013961-RA","No alias","Pseudotsuga menziesii","(at4g18910 : 278.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 268.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00014449-RA","No alias","Pseudotsuga menziesii","(at5g60020 : 734.0) putative laccase,  a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 237.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"PSME_00014526-RA","No alias","Pseudotsuga menziesii","(at1g67720 : 105.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8l4h4|nork_medtr : 87.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00014534-RA","No alias","Pseudotsuga menziesii","(at4g01130 : 150.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 128.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00014608-RA","No alias","Pseudotsuga menziesii","(at4g35800 : 127.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00014618-RA","No alias","Pseudotsuga menziesii","(at4g32850 : 352.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"PSME_00014697-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 367.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 185.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 726.0) &  (original description: no original description)","protein_coding"
"PSME_00014701-RA","No alias","Pseudotsuga menziesii","(at3g46040 : 196.0) Regulated by TCP20.; ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (q9at34|rs15a_dauca : 195.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00014820-RA","No alias","Pseudotsuga menziesii","(at2g36630 : 423.0) Sulfite exporter TauE/SafE family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G25737.1); Has 1587 Blast hits to 1517 proteins in 484 species: Archae - 83; Bacteria - 808; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"PSME_00015403-RA","No alias","Pseudotsuga menziesii","(at2g41705 : 273.0) camphor resistance CrcB family protein; CONTAINS InterPro DOMAIN/s: Camphor resistance CrcB protein (InterPro:IPR003691); Has 1596 Blast hits to 1594 proteins in 702 species: Archae - 22; Bacteria - 1268; Metazoa - 2; Fungi - 87; Plants - 37; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"PSME_00015432-RA","No alias","Pseudotsuga menziesii","(at3g51430 : 186.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00015546-RA","No alias","Pseudotsuga menziesii","(at5g03300 : 253.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (o49923|adk_phypa : 221.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00016063-RA","No alias","Pseudotsuga menziesii","(at2g26850 : 86.3) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G32560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"PSME_00016562-RA","No alias","Pseudotsuga menziesii","(at4g00620 : 300.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00016672-RA","No alias","Pseudotsuga menziesii","(at1g67820 : 293.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00016714-RA","No alias","Pseudotsuga menziesii","(q6yuu5|mdr_orysa : 1107.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (at3g28345 : 1105.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (reliability: 2210.0) &  (original description: no original description)","protein_coding"
"PSME_00016782-RA","No alias","Pseudotsuga menziesii","(at5g23290 : 95.5) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"PSME_00016835-RA","No alias","Pseudotsuga menziesii","(p28002|comt1_medsa : 153.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at1g51990 : 150.0) O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00016940-RA","No alias","Pseudotsuga menziesii","(at5g47690 : 149.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00017024-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 159.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"PSME_00017334-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 631.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 1262.0) &  (original description: no original description)","protein_coding"
"PSME_00017562-RA","No alias","Pseudotsuga menziesii","(q9fxt4|agal_orysa : 206.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (at5g08370 : 204.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00017602-RA","No alias","Pseudotsuga menziesii","(at3g17630 : 197.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00017652-RA","No alias","Pseudotsuga menziesii","(at1g64060 : 206.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00017763-RA","No alias","Pseudotsuga menziesii","(at5g15640 : 188.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G72820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00017991-RA","No alias","Pseudotsuga menziesii","(at5g02010 : 408.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato.  Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"PSME_00018032-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 145.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00018057-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018158-RA","No alias","Pseudotsuga menziesii","(at3g23330 : 90.5) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor  22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00018292-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018358-RA","No alias","Pseudotsuga menziesii","(at5g24330 : 139.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication.  Contains a PCNA-binding domain.  ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00018365-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 267.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 189.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"PSME_00018474-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 113.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"PSME_00018878-RA","No alias","Pseudotsuga menziesii","(at3g04470 : 147.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 1133 Blast hits to 894 proteins in 124 species: Archae - 0; Bacteria - 10; Metazoa - 597; Fungi - 29; Plants - 361; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00019114-RA","No alias","Pseudotsuga menziesii","(at5g03810 : 287.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 211.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"PSME_00019160-RA","No alias","Pseudotsuga menziesii","(at1g47420 : 176.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"PSME_00019234-RA","No alias","Pseudotsuga menziesii","(at4g27730 : 86.3) oligopeptide transporter; oligopeptide transporter 1 (OPT6); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 9 (TAIR:AT5G53510.1); Has 1157 Blast hits to 1133 proteins in 115 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 800; Plants - 327; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"PSME_00019335-RA","No alias","Pseudotsuga menziesii","(at5g60160 : 409.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q45055|apea_borbu : 80.1) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00019491-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019539-RA","No alias","Pseudotsuga menziesii","(at1g65930 : 97.8) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (q40345|idhp_medsa : 97.8) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"PSME_00019588-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019945-RA","No alias","Pseudotsuga menziesii","(at2g21790 : 232.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00019976-RA","No alias","Pseudotsuga menziesii","(at1g30520 : 152.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00020131-RA","No alias","Pseudotsuga menziesii","(at1g66910 : 134.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (p17801|kpro_maize : 91.7) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"PSME_00020132-RA","No alias","Pseudotsuga menziesii","(at5g38240 : 100.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G38250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00020549-RA","No alias","Pseudotsuga menziesii","(at4g13970 : 142.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: SWIM zinc finger family protein (TAIR:AT1G60560.1); Has 80 Blast hits to 80 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00020554-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00020643-RA","No alias","Pseudotsuga menziesii","(at2g41450 : 130.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00020787-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00020909-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021032-RA","No alias","Pseudotsuga menziesii","(at4g36980 : 395.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"PSME_00021041-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021055-RA","No alias","Pseudotsuga menziesii","(at5g50920 : 279.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 277.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00021592-RA","No alias","Pseudotsuga menziesii","(at5g16900 : 381.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, sperm cell, sepal, root; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G07560.1); Has 168111 Blast hits to 123484 proteins in 4541 species: Archae - 113; Bacteria - 13955; Metazoa - 44789; Fungi - 10304; Plants - 79478; Viruses - 406; Other Eukaryotes - 19066 (source: NCBI BLink). & (q8lkz1|nork_pea : 282.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 722.0) &  (original description: no original description)","protein_coding"
"PSME_00021693-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021878-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 155.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00021975-RA","No alias","Pseudotsuga menziesii","(at3g12770 : 530.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor  22 (MEF22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 43523 Blast hits to 14475 proteins in 290 species: Archae - 0; Bacteria - 15; Metazoa - 148; Fungi - 158; Plants - 42447; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"PSME_00022036-RA","No alias","Pseudotsuga menziesii","(at1g60390 : 471.0) polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00022054-RA","No alias","Pseudotsuga menziesii","(at2g23970 : 111.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00022055-RA","No alias","Pseudotsuga menziesii","(at2g23970 : 157.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00022077-RA","No alias","Pseudotsuga menziesii","(at3g04830 : 383.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 523 Blast hits to 519 proteins in 216 species: Archae - 31; Bacteria - 43; Metazoa - 200; Fungi - 109; Plants - 58; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 766.0) &  (original description: no original description)","protein_coding"
"PSME_00022083-RA","No alias","Pseudotsuga menziesii","(at3g26100 : 530.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00022158-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022542-RA","No alias","Pseudotsuga menziesii","(at5g48940 : 336.0) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93194|rpk1_iponi : 303.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"PSME_00022756-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 85.1) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00022903-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023038-RA","No alias","Pseudotsuga menziesii","(at4g11050 : 771.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 691.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 1542.0) &  (original description: no original description)","protein_coding"
"PSME_00023109-RA","No alias","Pseudotsuga menziesii","(at4g30610 : 208.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1.  It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (p08818|cbp2_horvu : 186.0) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00023246-RA","No alias","Pseudotsuga menziesii","(at3g51680 : 356.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 321.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00023368-RA","No alias","Pseudotsuga menziesii","(q8w013|comt1_catro : 248.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 240.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay.  AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00023529-RA","No alias","Pseudotsuga menziesii","(at5g65720 : 230.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"PSME_00023690-RA","No alias","Pseudotsuga menziesii","(at1g28490 : 169.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00023853-RA","No alias","Pseudotsuga menziesii","(at1g71120 : 243.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 149.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00023871-RA","No alias","Pseudotsuga menziesii","(at5g03610 : 235.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q7y1x1|est_hevbr : 110.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00023926-RA","No alias","Pseudotsuga menziesii","(at1g80490 : 545.0) TOPLESS-related 1 (TPR1); INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: cytosol; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00024351-RA","No alias","Pseudotsuga menziesii","(at5g51890 : 381.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (p37834|per1_orysa : 249.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00024356-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 141.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"PSME_00024713-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 133.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00024926-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00024985-RA","No alias","Pseudotsuga menziesii","(p22195|per1_arahy : 166.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 145.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00025128-RA","No alias","Pseudotsuga menziesii","(at4g32720 : 87.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins.  Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity.  Has RNA binding activity.  Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"PSME_00025215-RA","No alias","Pseudotsuga menziesii","(at4g00100 : 212.0) Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (p62302|rs13_soybn : 211.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"PSME_00025329-RA","No alias","Pseudotsuga menziesii","(at5g01950 : 245.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00025372-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025448-RA","No alias","Pseudotsuga menziesii","(at5g21010 : 195.0) BTB-POZ and MATH domain 5 (BPM5); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 6 (TAIR:AT3G43700.1); Has 6893 Blast hits to 6668 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4820; Fungi - 220; Plants - 1514; Viruses - 55; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00025522-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00026589-RA","No alias","Pseudotsuga menziesii","(at1g74250 : 127.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00026721-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 283.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"PSME_00026749-RA","No alias","Pseudotsuga menziesii","(at5g57610 : 192.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (q7xlc6|hak11_orysa : 185.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00026761-RA","No alias","Pseudotsuga menziesii","(at4g29890 : 146.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o22553|chmo_betvu : 116.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Beta vulgaris (Sugar beet) & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00027093-RA","No alias","Pseudotsuga menziesii","(q40471|if4a9_tobac : 186.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 182.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00027176-RA","No alias","Pseudotsuga menziesii","(at1g52880 : 226.0) Transcription factor with a NAC domain.  Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.; NO APICAL MERISTEM (NAM); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein  2 (TAIR:AT3G15510.1); Has 3040 Blast hits to 3032 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3034; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q52qh4|nac68_orysa : 185.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00027377-RA","No alias","Pseudotsuga menziesii","(q949g3|pdr1_nicpl : 240.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g15520 : 228.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"PSME_00027736-RA","No alias","Pseudotsuga menziesii","(at1g19600 : 297.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00027827-RA","No alias","Pseudotsuga menziesii","(p54774|cdc48_soybn : 254.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at3g53230 : 252.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"PSME_00027951-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 135.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00028049-RA","No alias","Pseudotsuga menziesii","(at1g26560 : 122.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (p49235|bglc_maize : 111.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00028090-RA","No alias","Pseudotsuga menziesii","(at2g44710 : 303.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00028209-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 142.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (q40345|idhp_medsa : 101.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00028301-RA","No alias","Pseudotsuga menziesii","(at1g11390 : 311.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"PSME_00028325-RA","No alias","Pseudotsuga menziesii","(at1g44170 : 235.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00028423-RA","No alias","Pseudotsuga menziesii","(at3g19010 : 156.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: flavonol synthase activity, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19000.1). & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00028712-RA","No alias","Pseudotsuga menziesii","(q9zrb0|tbb3_wheat : 259.0) Tubulin beta-3 chain (Beta-3 tubulin) - Triticum aestivum (Wheat) & (at5g12250 : 256.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00028948-RA","No alias","Pseudotsuga menziesii","(at3g09440 : 174.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to karrikin, response to heat; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1). & (p11143|hsp70_maize : 174.0) Heat shock 70 kDa protein - Zea mays (Maize) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00029094-RA","No alias","Pseudotsuga menziesii","(p46287|rl11_medsa : 94.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (at5g45775 : 93.6) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00029145-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 339.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 219.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00029201-RA","No alias","Pseudotsuga menziesii","(at2g24130 : 349.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 282.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"PSME_00029203-RA","No alias","Pseudotsuga menziesii","(at5g02270 : 341.0) member of NAP subfamily; non-intrinsic ABC protein 9 (NAP9); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G03905.1). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00029528-RA","No alias","Pseudotsuga menziesii","(at2g30600 : 338.0) BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00029567-RA","No alias","Pseudotsuga menziesii","(at1g19720 : 153.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast, cytoplasm; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 61333 Blast hits to 15549 proteins in 316 species: Archae - 3; Bacteria - 46; Metazoa - 404; Fungi - 515; Plants - 59134; Viruses - 0; Other Eukaryotes - 1231 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00029582-RA","No alias","Pseudotsuga menziesii","(at1g26560 : 166.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (p49235|bglc_maize : 110.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00029594-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 114.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00029612-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00029713-RA","No alias","Pseudotsuga menziesii","(p54774|cdc48_soybn : 455.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at3g53230 : 451.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00029798-RA","No alias","Pseudotsuga menziesii","(at2g41740 : 395.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"PSME_00029816-RA","No alias","Pseudotsuga menziesii","(at4g20140 : 188.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase.  GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 164.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00029866-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 190.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00030049-RA","No alias","Pseudotsuga menziesii","(q71vm4|ima1a_orysa : 404.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at3g06720 : 390.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"PSME_00030179-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 420.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 410.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00030284-RA","No alias","Pseudotsuga menziesii","(at3g25100 : 129.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00030336-RA","No alias","Pseudotsuga menziesii","(at5g62710 : 554.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 175257 Blast hits to 128076 proteins in 4599 species: Archae - 150; Bacteria - 15408; Metazoa - 46877; Fungi - 10024; Plants - 81619; Viruses - 466; Other Eukaryotes - 20713 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 243.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"PSME_00030383-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 409.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 402.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00030524-RA","No alias","Pseudotsuga menziesii","(at3g12740 : 379.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00030703-RA","No alias","Pseudotsuga menziesii","(p10290|mybc_maize : 187.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at5g49330 : 184.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00030730-RA","No alias","Pseudotsuga menziesii","(at2g44580 : 282.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00030957-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00030967-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031306-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031398-RA","No alias","Pseudotsuga menziesii","(at2g28100 : 473.0) Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides.  was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 468.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 946.0) &  (original description: no original description)","protein_coding"
"PSME_00031766-RA","No alias","Pseudotsuga menziesii","(at1g54290 : 187.0) Translation initiation factor SUI1 family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, translation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor SUI1 (InterPro:IPR001950), Eukaryotic translation initiation factor SUI1 (InterPro:IPR005874); BEST Arabidopsis thaliana protein match is: Translation initiation factor SUI1 family protein (TAIR:AT4G27130.1); Has 846 Blast hits to 843 proteins in 268 species: Archae - 14; Bacteria - 1; Metazoa - 362; Fungi - 162; Plants - 197; Viruses - 5; Other Eukaryotes - 105 (source: NCBI BLink). & (q9sqf4|sui1_braol : 184.0) Protein translation factor SUI1 homolog (Translation initiation factor nps45) - Brassica oleracea (Wild cabbage) & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00031954-RA","No alias","Pseudotsuga menziesii","(at5g12100 : 227.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00032371-RA","No alias","Pseudotsuga menziesii","(at2g38290 : 512.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1024.0) &  (original description: no original description)","protein_coding"
"PSME_00032830-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 307.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52579|ifrh_tobac : 298.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"PSME_00033082-RA","No alias","Pseudotsuga menziesii","(p38385|sc61g_orysa : 99.0) Protein transport protein SEC61 subunit gamma - Oryza sativa (Rice) & (at5g50460 : 94.0) secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport, protein targeting; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT4G24920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00033131-RA","No alias","Pseudotsuga menziesii","(at4g13930 : 147.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00033256-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033362-RA","No alias","Pseudotsuga menziesii","(at2g06050 : 403.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"PSME_00033458-RA","No alias","Pseudotsuga menziesii","(at5g52450 : 300.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00033632-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033878-RA","No alias","Pseudotsuga menziesii","(p22196|per2_arahy : 108.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at2g41480 : 106.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00033958-RA","No alias","Pseudotsuga menziesii","(at5g22750 : 87.8) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00034238-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 203.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00034330-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 139.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00034637-RA","No alias","Pseudotsuga menziesii","(at5g33406 : 87.8) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00034828-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00034858-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035265-RA","No alias","Pseudotsuga menziesii","(at5g41080 : 218.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: senescence-related gene 3 (TAIR:AT3G02040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"PSME_00035398-RA","No alias","Pseudotsuga menziesii","(at3g02200 : 143.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G15610.2); Has 657 Blast hits to 657 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 271; Fungi - 161; Plants - 136; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"PSME_00035746-RA","No alias","Pseudotsuga menziesii","(at2g38940 : 323.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00035869-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035876-RA","No alias","Pseudotsuga menziesii","(at1g57870 : 137.0) shaggy-like kinase 42 (SK42); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like protein kinase 41 (TAIR:AT1G09840.6). & (q40518|msk1_tobac : 132.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00035963-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 345.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00036059-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00036359-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 137.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83948|pme3_citsi : 83.2) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00036512-RA","No alias","Pseudotsuga menziesii","(at2g39210 : 136.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00036820-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 145.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00036860-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 208.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00036943-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 142.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83948|pme3_citsi : 82.4) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00037085-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00037304-RA","No alias","Pseudotsuga menziesii","(at5g19420 : 188.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00037313-RA","No alias","Pseudotsuga menziesii","(at1g69850 : 234.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00037777-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 577.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 577.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"PSME_00037848-RA","No alias","Pseudotsuga menziesii","(at3g54780 : 99.8) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G38970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"PSME_00037862-RA","No alias","Pseudotsuga menziesii","(at1g07850 : 255.0) Protein of unknown function (DUF604); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 101 Blast hits to 95 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 16; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"PSME_00037905-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 198.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00037909-RA","No alias","Pseudotsuga menziesii","(at4g29330 : 181.0) DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918 Blast hits to 916 proteins in 241 species: Archae - 0; Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (q4g2j5|der12_maize : 174.0) Derlin-1.2 (ZmDerlin1-2) - Zea mays (Maize) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00037951-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 610.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 610.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1220.0) &  (original description: no original description)","protein_coding"
"PSME_00038496-RA","No alias","Pseudotsuga menziesii","(at5g25930 : 385.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 231.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"PSME_00038733-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00038804-RA","No alias","Pseudotsuga menziesii","(at4g36630 : 157.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor  beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor  beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00038843-RA","No alias","Pseudotsuga menziesii","(at5g42800 : 216.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51108|dfra_maize : 205.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"PSME_00039066-RA","No alias","Pseudotsuga menziesii","(at3g17450 : 92.8) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00039083-RA","No alias","Pseudotsuga menziesii","(at2g01830 : 219.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00039192-RA","No alias","Pseudotsuga menziesii","(at2g21620 : 144.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00039496-RA","No alias","Pseudotsuga menziesii","(at3g28880 : 103.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00039715-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039855-RA","No alias","Pseudotsuga menziesii","(at5g57050 : 106.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00039987-RA","No alias","Pseudotsuga menziesii","(at5g35570 : 268.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00039992-RA","No alias","Pseudotsuga menziesii","(at5g40380 : 151.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 84.7) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"PSME_00040477-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 88.6) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"PSME_00040836-RA","No alias","Pseudotsuga menziesii","(at5g25610 : 91.3) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"PSME_00041014-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041103-RA","No alias","Pseudotsuga menziesii","(at1g19600 : 315.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00041333-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041431-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041558-RA","No alias","Pseudotsuga menziesii","(at4g24780 : 356.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 235.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00041687-RA","No alias","Pseudotsuga menziesii","(at3g03740 : 146.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00041834-RA","No alias","Pseudotsuga menziesii","(q43033|tcmo_petcr : 337.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g30490 : 331.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00042038-RA","No alias","Pseudotsuga menziesii","(at5g01930 : 509.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1018.0) &  (original description: no original description)","protein_coding"
"PSME_00042096-RA","No alias","Pseudotsuga menziesii","(at5g67270 : 164.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00042330-RA","No alias","Pseudotsuga menziesii","(at5g51350 : 83.6) Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G61480.1); Has 108404 Blast hits to 45100 proteins in 1144 species: Archae - 34; Bacteria - 5225; Metazoa - 23563; Fungi - 1032; Plants - 70560; Viruses - 18; Other Eukaryotes - 7972 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"PSME_00042480-RA","No alias","Pseudotsuga menziesii","(at2g34930 : 87.8) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00042489-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042533-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042816-RA","No alias","Pseudotsuga menziesii","(at2g24130 : 468.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 292.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00042820-RA","No alias","Pseudotsuga menziesii","(at5g65360 : 97.1) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p68428|h32_wheat : 97.1) Histone H3.2 - Triticum aestivum (Wheat) & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"PSME_00042888-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 127.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00043015-RA","No alias","Pseudotsuga menziesii","(at2g28500 : 127.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00043063-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043165-RA","No alias","Pseudotsuga menziesii","(at3g13770 : 384.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00043221-RA","No alias","Pseudotsuga menziesii","(at1g09420 : 120.0) Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH.  The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein.  gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.; glucose-6-phosphate dehydrogenase 4 (G6PD4); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glucose metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1). & (q43839|g6pdc_soltu : 109.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Solanum tuberosum (Potato) & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00043404-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043530-RA","No alias","Pseudotsuga menziesii","(at1g77120 : 244.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (p20306|adh1_orysa : 244.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Oryza sativa (Rice) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00043612-RA","No alias","Pseudotsuga menziesii","(at2g47800 : 249.0) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport.  The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.; multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00043678-RA","No alias","Pseudotsuga menziesii","(at1g66910 : 298.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (p17801|kpro_maize : 175.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00043918-RA","No alias","Pseudotsuga menziesii","(at1g29900 : 142.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00044183-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00044476-RA","No alias","Pseudotsuga menziesii","(at1g74270 : 189.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT1G07070.1); Has 765 Blast hits to 765 proteins in 258 species: Archae - 25; Bacteria - 0; Metazoa - 322; Fungi - 147; Plants - 149; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00044478-RA","No alias","Pseudotsuga menziesii","(at2g39980 : 335.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o24645|hcbt1_diaca : 144.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00044509-RA","No alias","Pseudotsuga menziesii",""(at1g01280 : 223.0) member of CYP703A  CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; ""cytochrome P450, family 703, subfamily A, polypeptide 2"" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (o48956|c98a1_sorbi : 205.0) Cytochrome P450 98A1 (EC 1.14.-.-) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (reliability: 406.0) &  (original description: no original description)"","protein_coding"
"PSME_00044541-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00045249-RA","No alias","Pseudotsuga menziesii","(at1g14685 : 185.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00045482-RA","No alias","Pseudotsuga menziesii","(at3g14740 : 243.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00045558-RA","No alias","Pseudotsuga menziesii","(at4g37530 : 427.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37520.1); Has 4481 Blast hits to 4468 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 180; Plants - 4223; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p22195|per1_arahy : 252.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00045594-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 164.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00045928-RA","No alias","Pseudotsuga menziesii","(at4g34990 : 238.0) Member of the R2R3 factor gene family.; myb domain protein 32 (MYB32); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 7 (TAIR:AT2G16720.1); Has 9023 Blast hits to 8385 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 473; Plants - 6077; Viruses - 3; Other Eukaryotes - 1790 (source: NCBI BLink). & (p20025|myb38_maize : 238.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00046145-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 94.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00046184-RA","No alias","Pseudotsuga menziesii","(at5g09430 : 308.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00046198-RA","No alias","Pseudotsuga menziesii","(at5g39390 : 195.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 105441 Blast hits to 101727 proteins in 4175 species: Archae - 121; Bacteria - 11886; Metazoa - 36736; Fungi - 8087; Plants - 34277; Viruses - 298; Other Eukaryotes - 14036 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 129.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00046729-RA","No alias","Pseudotsuga menziesii","(at1g53860 : 171.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00047048-RA","No alias","Pseudotsuga menziesii","(at3g59280 : 167.0) mutant exhibited resistance to growth on media containing thaxtomin due to a difference in the rate of uptake of the toxin.We proposed that TXR1 is a component of, or regulator of, a dispensable transport mechanism.; THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein Transporter, Pam16 (InterPro:IPR005341); BEST Arabidopsis thaliana protein match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2); Has 398 Blast hits to 398 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants - 79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00047099-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047137-RA","No alias","Pseudotsuga menziesii","(q10710|sta_ricco : 214.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (at4g02050 : 210.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00047362-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 157.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of  the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00047413-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047471-RA","No alias","Pseudotsuga menziesii","(at2g23970 : 261.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00047785-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 494.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 483.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00047914-RA","No alias","Pseudotsuga menziesii","(at2g19330 : 245.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00047920-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00048074-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00048129-RA","No alias","Pseudotsuga menziesii","(at2g27610 : 99.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"PSME_00048312-RA","No alias","Pseudotsuga menziesii","(at5g03760 : 197.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00048340-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 131.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"PSME_00048381-RA","No alias","Pseudotsuga menziesii","(at5g61030 : 149.0) encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.; glycine-rich RNA-binding protein 3 (GR-RBP3); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: response to cold; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q08937|roc2_nicsy : 95.9) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00048500-RA","No alias","Pseudotsuga menziesii","(at4g36360 : 100.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 93.2) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00048506-RA","No alias","Pseudotsuga menziesii","(at2g44745 : 162.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00048536-RA","No alias","Pseudotsuga menziesii","(at3g22470 : 147.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00048656-RA","No alias","Pseudotsuga menziesii","(at1g06840 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00048745-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 508.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"PSME_00049203-RA","No alias","Pseudotsuga menziesii","(at3g17630 : 253.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00049255-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 229.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (p93194|rpk1_iponi : 89.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00049374-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00049510-RA","No alias","Pseudotsuga menziesii","(at1g60160 : 288.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q69ri8|hak14_orysa : 257.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00049603-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 153.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00049606-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 161.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"PSME_00049651-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 171.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00049666-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00049967-RA","No alias","Pseudotsuga menziesii","(at3g47570 : 250.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 150.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00050012-RA","No alias","Pseudotsuga menziesii","(at5g65560 : 311.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 288.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00050605-RA","No alias","Pseudotsuga menziesii","(at2g40610 : 384.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p93442|expa4_orysa : 376.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"PSME_00050705-RA","No alias","Pseudotsuga menziesii","(at2g22420 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p22195|per1_arahy : 174.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00050888-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00051088-RA","No alias","Pseudotsuga menziesii","(at2g39900 : 122.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 81.3) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00051188-RA","No alias","Pseudotsuga menziesii","(at1g22400 : 405.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (p56725|zox_phavu : 178.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00051415-RA","No alias","Pseudotsuga menziesii","(at4g00560 : 196.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: dTDP-4-dehydrorhamnose reductase activity, binding, catalytic activity; INVOLVED IN: extracellular polysaccharide biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00051753-RA","No alias","Pseudotsuga menziesii","(at5g09810 : 268.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p20904|act_volca : 267.0) Actin - Volvox carteri & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00051792-RA","No alias","Pseudotsuga menziesii","(at5g62230 : 110.0) Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.; ERECTA-like 1 (ERL1); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00051913-RA","No alias","Pseudotsuga menziesii","(at5g06050 : 133.0) Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00052080-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052149-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052386-RA","No alias","Pseudotsuga menziesii","(at1g79710 : 164.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 1010 Blast hits to 995 proteins in 167 species: Archae - 4; Bacteria - 188; Metazoa - 0; Fungi - 6; Plants - 265; Viruses - 0; Other Eukaryotes - 547 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00052451-RA","No alias","Pseudotsuga menziesii","(at1g03990 : 391.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3131 Blast hits to 2994 proteins in 799 species: Archae - 23; Bacteria - 2103; Metazoa - 14; Fungi - 174; Plants - 167; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"PSME_00052695-RA","No alias","Pseudotsuga menziesii","(at1g61065 : 146.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 557 Blast hits to 557 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00052916-RA","No alias","Pseudotsuga menziesii","(at2g47980 : 447.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"PSME_00053162-RA","No alias","Pseudotsuga menziesii","(at3g08500 : 174.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 164.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00053636-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053711-RA","No alias","Pseudotsuga menziesii","(at5g65650 : 153.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT4G36660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00053746-RA","No alias","Pseudotsuga menziesii","(at1g07900 : 130.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00053948-RA","No alias","Pseudotsuga menziesii","(at2g39210 : 468.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00054110-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 303.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 204.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00054361-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 404.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 212.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"PSME_00054522-RA","No alias","Pseudotsuga menziesii",""(at1g56170 : 116.0) Encodes a protein with similarity to a subunit of  the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues; ""nuclear factor Y, subunit C2"" (NF-YC2); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 1485 Blast hits to 1485 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 338; Plants - 429; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)"","protein_coding"
"PSME_00054573-RA","No alias","Pseudotsuga menziesii","(at1g66910 : 310.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (p17801|kpro_maize : 199.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00054929-RA","No alias","Pseudotsuga menziesii","(at2g23970 : 143.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"PSME_00054961-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00054987-RA","No alias","Pseudotsuga menziesii","(at4g10955 : 287.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"PSME_00055238-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 332.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00055275-RA","No alias","Pseudotsuga menziesii","(q41741|if4a_maize : 431.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (at1g72730 : 427.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.1); Has 48726 Blast hits to 48144 proteins in 3104 species: Archae - 749; Bacteria - 26664; Metazoa - 6044; Fungi - 4769; Plants - 2616; Viruses - 17; Other Eukaryotes - 7867 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00055496-RA","No alias","Pseudotsuga menziesii","(at5g01650 : 142.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species: Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00055588-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 207.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00055628-RA","No alias","Pseudotsuga menziesii","(at3g22470 : 266.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 231.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00055681-RA","No alias","Pseudotsuga menziesii","(at2g40760 : 261.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00055709-RA","No alias","Pseudotsuga menziesii","(at5g42610 : 202.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT2G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"PSME_00055756-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 272.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (p10538|amyb_soybn : 180.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00055880-RA","No alias","Pseudotsuga menziesii","(at5g07990 : 253.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 253.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"PSME_00056786-RA","No alias","Pseudotsuga menziesii","(at1g26760 : 191.0) SET domain protein 35 (SDG35); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"Seita.1G003700.1","No alias","Setaria italica ","Trihelix-type transcription factor","protein_coding"
"Seita.1G005300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G012000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G014500.1","No alias","Setaria italica ","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & spermine synthase","protein_coding"
"Seita.1G019300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G045800.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.1G093800.1","No alias","Setaria italica ","component *(SF3B3) of splicing factor 3B complex","protein_coding"
"Seita.1G094000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G132600.1","No alias","Setaria italica ","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G179100.1","No alias","Setaria italica ","alkaline sucrose-specific invertase *(CIN)","protein_coding"
"Seita.1G219900.1","No alias","Setaria italica ","regulatory protein *(MAF1) of RNA polymerase III","protein_coding"
"Seita.1G220700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G235500.1","No alias","Setaria italica ","regulatory component B of PP2A phosphatase complexes","protein_coding"
"Seita.1G282900.1","No alias","Setaria italica ","histone demethylase *(PKDM8)","protein_coding"
"Seita.1G285200.1","No alias","Setaria italica ","histone H3 methylation reader (PWO) of PRC2 histone methylation complex","protein_coding"
"Seita.1G342500.1","No alias","Setaria italica ","group-SAC-I phosphoinositide 3,5-phosphatase","protein_coding"
"Seita.1G349200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G351400.1","No alias","Setaria italica ","protein de-S-acylation enzyme *(ABAPT)","protein_coding"
"Seita.1G378100.1","No alias","Setaria italica ","scaffold component *(FRY) of RAM signalling pathway","protein_coding"
"Seita.1G378700.1","No alias","Setaria italica ","miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly","protein_coding"
"Seita.2G032100.1","No alias","Setaria italica ","regulatory protein *(ILP) of Programmed Cell Death","protein_coding"
"Seita.2G100600.1","No alias","Setaria italica ","substrate adaptor of CUL3-based E3 ubiquitin ligase complex & substrate(LHP1) adaptor of CUL3-BTB E3 ubiquitin ligase","protein_coding"
"Seita.2G132000.1","No alias","Setaria italica ","regulatory kinase *(CTR1) of EIN2 signal transducer activity & MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G140000.1","No alias","Setaria italica ","triacylglycerol lipase *(LIP)","protein_coding"
"Seita.2G148500.1","No alias","Setaria italica ","class-III histone methyltransferase *(Trx)","protein_coding"
"Seita.2G216100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G222100.1","No alias","Setaria italica ","plasma membrane-to-nucleus signalling factor *(BRX)","protein_coding"
"Seita.2G249700.1","No alias","Setaria italica ","lipopolysaccharide-binding protein *(LBR) involved in bacterial elicitor response","protein_coding"
"Seita.2G269500.1","No alias","Setaria italica ","class I ARF-GAP ARF-GTPase-activating protein","protein_coding"
"Seita.2G272000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G281700.1","No alias","Setaria italica ","RING-H2-class CTL-subclass E3 ubiquitin ligase & E3 ubiquitin ligase *(EOD1)","protein_coding"
"Seita.2G284900.1","No alias","Setaria italica ","ATP synthase complex assembly factor *(BFA3)","protein_coding"
"Seita.2G304400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G322000.1","No alias","Setaria italica ","mitochondrial NAD-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.2G335000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G354700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G408000.1","No alias","Setaria italica ","small subunit *(SAE1) of E1 SUMO ubiquitin-activating enzyme complex","protein_coding"
"Seita.2G410600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G419600.1","No alias","Setaria italica ","component *(CHR5) of SAGA transcription co-activator complex & CHD1-type chromatin remodeling factor *(CHR5)","protein_coding"
"Seita.2G427000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G048100.1","No alias","Setaria italica ","component *(PWR) of HDA9-PWR deacetylation complex","protein_coding"
"Seita.3G123500.1","No alias","Setaria italica ","PERK-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.3G163600.1","No alias","Setaria italica ","component *(SWC4) shared with NuA4/SWR1 complexes & recruitment factor of SWR1 chromatin remodeling complex *(SWC4)","protein_coding"
"Seita.3G187000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G202000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G237300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G270900.1","No alias","Setaria italica ","RNA splicing factor *(SR30/34)","protein_coding"
"Seita.3G289400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G291800.1","No alias","Setaria italica ","E3 ubiquitin ligase *(SR1)","protein_coding"
"Seita.3G309600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G311800.1","No alias","Setaria italica ","component *(SGF29) of SAGA transcription co-activator complex","protein_coding"
"Seita.3G332800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G336800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G347300.1","No alias","Setaria italica ","PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex","protein_coding"
"Seita.3G349800.1","No alias","Setaria italica ","SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex","protein_coding"
"Seita.3G395200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G002700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G011600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G012700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G019600.1","No alias","Setaria italica ","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Seita.4G024100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G199100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G205600.1","No alias","Setaria italica ","component *(SOP1) of PAXT RNA-exosome-activation complex","protein_coding"
"Seita.4G267000.1","No alias","Setaria italica ","SSU processome assembly factor *(UTP18)","protein_coding"
"Seita.4G289200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G289500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G024300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G065500.1","No alias","Setaria italica ","component *(CWC21) of MAC spliceosome-associated complex","protein_coding"
"Seita.5G073400.1","No alias","Setaria italica ","component *(SNL) of histone deacetylase machineries","protein_coding"
"Seita.5G093900.1","No alias","Setaria italica ","LRK10-1-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G096100.1","No alias","Setaria italica ","phosphatidate phosphatase *(LPP-alpha) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Seita.5G110300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G133500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G151100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G174400.1","No alias","Setaria italica ","regulatory protein *(CYCL) of cell cycle","protein_coding"
"Seita.5G220300.1","No alias","Setaria italica ","component *(LUG/LUH) of transcriptional co-repressor complex","protein_coding"
"Seita.5G229300.1","No alias","Setaria italica ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Seita.5G267200.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G270100.1","No alias","Setaria italica ","voltage-gated calcium cation channel *(TPC)","protein_coding"
"Seita.5G294200.1","No alias","Setaria italica ","class XI myosin microfilament-based motor protein","protein_coding"
"Seita.5G306500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G336300.1","No alias","Setaria italica ","histone demethylase *(PKDM12)","protein_coding"
"Seita.5G403400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G417000.1","No alias","Setaria italica ","demethoxyubiquinone hydroxylase","protein_coding"
"Seita.5G422600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G431200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G000800.1","No alias","Setaria italica ","E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Seita.6G010900.1","No alias","Setaria italica ","phospholipase-A1 *(PA-PLA1) & phospholipase *(SGR2)","protein_coding"
"Seita.6G028700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G091400.1","No alias","Setaria italica ","phosphatidylinositol 3-kinase component *(VPS34/PI3K) of PI3-kinase vesicle nucleation complex I/II & phosphatidylinositol 3-kinase *(VPS34) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.6G092200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G101600.1","No alias","Setaria italica ","phosphatidylinositol 3-kinase component *(VPS34/PI3K) of PI3-kinase vesicle nucleation complex I/II & phosphatidylinositol 3-kinase *(VPS34)","protein_coding"
"Seita.6G145200.1","No alias","Setaria italica ","pre-mRNA splicing factor *(RBM25)","protein_coding"
"Seita.6G169000.1","No alias","Setaria italica ","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Seita.6G169200.1","No alias","Setaria italica ","component *(ARID5) of ISWI chromatin remodeling complex","protein_coding"
"Seita.6G176300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G183300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G205200.1","No alias","Setaria italica ","EIL-type transcription factor","protein_coding"
"Seita.6G230200.1","No alias","Setaria italica ","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding"
"Seita.6G239800.1","No alias","Setaria italica ","EC_1.11 oxidoreductase acting on peroxide as acceptor & peroxisomal/microsomal ascorbate peroxidase *(APX)","protein_coding"
"Seita.6G243400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G244700.1","No alias","Setaria italica ","component *(PIG-Q) of GPI N-acetylglucosamine transferase complex","protein_coding"
"Seita.6G249700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G007000.1","No alias","Setaria italica ","N-acetylglucosamine transporter *(NGT)","protein_coding"
"Seita.7G033900.1","No alias","Setaria italica ","FRS/FRF-type transcription factor","protein_coding"
"Seita.7G048100.1","No alias","Setaria italica ","auxiliary factor of DNA methylation pathway *(MORC)","protein_coding"
"Seita.7G098200.1","No alias","Setaria italica ","class-II histone methyltransferase *(ASH) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Seita.7G133000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G207300.1","No alias","Setaria italica ","linker histone *(H1)","protein_coding"
"Seita.7G226200.1","No alias","Setaria italica ","DYRK protein kinase & protein kinase *(YAK1) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G231900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G232600.1","No alias","Setaria italica ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Seita.7G238600.1","No alias","Setaria italica ","component *(Pex6) of Pex1-Pex6 subcomplex","protein_coding"
"Seita.7G293300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G295500.1","No alias","Setaria italica ","FRS/FRF-type transcription factor","protein_coding"
"Seita.8G000600.1","No alias","Setaria italica ","nucleoporin of nuclear pore complex *(NUP98)","protein_coding"
"Seita.8G035200.1","No alias","Setaria italica ","ROP-activating protein *(RopGAP)","protein_coding"
"Seita.8G053600.1","No alias","Setaria italica ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Seita.8G080000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G081400.1","No alias","Setaria italica ","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(ASD)","protein_coding"
"Seita.8G136500.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.8G137500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G155400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G157800.1","No alias","Setaria italica ","microtubule-stabilizing factor *(WDL)","protein_coding"
"Seita.8G167600.1","No alias","Setaria italica ","clade J phosphatase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.8G183100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G188100.1","No alias","Setaria italica ","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.8G193000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G234200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G236700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G250500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G253200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G253400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G017200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G023300.1","No alias","Setaria italica ","D-galactokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G027100.1","No alias","Setaria italica ","subunit alpha of E1 subcomplex of pyruvate dehydrogenase complex & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Seita.9G031900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G063800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G064800.1","No alias","Setaria italica ","regulatory protein *(ILP) of Programmed Cell Death","protein_coding"
"Seita.9G085500.1","No alias","Setaria italica ","temperature sensor protein *(CNGC2) & cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"Seita.9G125000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G163200.1","No alias","Setaria italica ","substrate adaptor *(FBL17) of SCF E3 ubiquitin ligase complex & regulatory protein *(FBL17) of cell cycle","protein_coding"
"Seita.9G178200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G179200.1","No alias","Setaria italica ","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"Seita.9G230300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G254500.1","No alias","Setaria italica ","substrate adaptor *(FBL15) of SCF E3 ubiquitin ligase complex","protein_coding"
"Seita.9G268500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G337700.1","No alias","Setaria italica ","metal cation transporter *(MRS/MGT)","protein_coding"
"Seita.9G349700.1","No alias","Setaria italica ","E3 ubiquitin ligase *(XBAT3)","protein_coding"
"Seita.9G353700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G398000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G401900.1","No alias","Setaria italica ","stabilizing factor of microtubule orientation *(SAB/KIP)","protein_coding"
"Seita.9G406600.1","No alias","Setaria italica ","histone demethylase *(KDM3) & auxiliary component *(JMJ24) of COMPASS histone trimethylation complex","protein_coding"
"Seita.9G416900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G417400.1","No alias","Setaria italica ","rhamnosyltransferase *(RRT)","protein_coding"
"Seita.9G430500.1","No alias","Setaria italica ","substrate adaptor of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Seita.9G469500.1","No alias","Setaria italica ","component *(ATG9) of autophagosome ATG9-2-18 membrane shuttling complex","protein_coding"
"Seita.9G473800.1","No alias","Setaria italica ","MYB-RELATED transcription factor *(TKI)","protein_coding"
"Seita.9G475100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G485200.1","No alias","Setaria italica ","UDP-3-O-acyl N-acetylglucosamine deacetylase *(LpxC)","protein_coding"
"Seita.9G520100.1","No alias","Setaria italica ","E3 ubiquitin ligase *(SPL)","protein_coding"
"Seita.9G536000.1","No alias","Setaria italica ","component *(SWC4) shared with NuA4/SWR1 complexes & recruitment factor of SWR1 chromatin remodeling complex *(SWC4)","protein_coding"
"Seita.9G540900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G565300.1","No alias","Setaria italica ","GPI lipid remodeling hydrolase *(PGAP3)","protein_coding"
"Seita.9G578700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G041200.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase *(CYP22) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.001G073500.1","No alias","Sorghum bicolor ","IMP/GMP-specific phosphohydrolase","protein_coding"
"Sobic.001G117300.1","No alias","Sorghum bicolor ","component *(HYC) of phosphatidylinositol 4-kinase complex","protein_coding"
"Sobic.001G124500.1","No alias","Sorghum bicolor ","fatty acid elongation condensing enzyme *(ELO)","protein_coding"
"Sobic.001G129400.2","No alias","Sorghum bicolor ","component *(bS21m) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.001G135400.1","No alias","Sorghum bicolor ","transcription factor *(C-GATA)","protein_coding"
"Sobic.001G143200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G151500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G185600.1","No alias","Sorghum bicolor ","metabolite transporter *(DTX)","protein_coding"
"Sobic.001G220500.1","No alias","Sorghum bicolor ","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G252500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G258100.1","No alias","Sorghum bicolor ","protease *(SBT1)","protein_coding"
"Sobic.001G297500.1","No alias","Sorghum bicolor ","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"Sobic.001G347300.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G380600.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase) & Nardilysin-like peptidase","protein_coding"
"Sobic.001G380900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G423300.1","No alias","Sorghum bicolor ","component *(Toc75-III) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G433100.3","No alias","Sorghum bicolor ","chaperone of protochlorophyllide oxidoreductase *(DAY) & chaperone of protochlorophyllide oxidoreductase *(CPP1)","protein_coding"
"Sobic.001G455800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase","protein_coding"
"Sobic.001G478700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G486700.1","No alias","Sorghum bicolor ","adenylosuccinate synthetase *(PUR11) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G507200.1","No alias","Sorghum bicolor ","component *(PIROGI) of SCAR/WAVE ARP2/3-activating complex","protein_coding"
"Sobic.001G520800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G540300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G040300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G042400.1","No alias","Sorghum bicolor ","D-lactate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.002G077100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G079100.2","No alias","Sorghum bicolor ","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.002G130800.1","No alias","Sorghum bicolor ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Sobic.002G142700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G147100.1","No alias","Sorghum bicolor ","GPI inositol deacylase *(PGAP1)","protein_coding"
"Sobic.002G160700.1","No alias","Sorghum bicolor ","component *(THOC3/Tex1) of mRNP trafficking THO subcomplex","protein_coding"
"Sobic.002G172700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G298100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G307800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G317600.1","No alias","Sorghum bicolor ","threonine reactive imine intermediate deaminase *(RidA)","protein_coding"
"Sobic.002G336200.2","No alias","Sorghum bicolor ","adenosine proton symporter *(ENT3) & nucleoside transporter *(ENT)","protein_coding"
"Sobic.002G385700.2","No alias","Sorghum bicolor ","malate dehydrogenase component of AAA-ATPase motor complex","protein_coding"
"Sobic.002G401100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G406700.1","No alias","Sorghum bicolor ","aromatic amino acid transporter *(HAAAP)","protein_coding"
"Sobic.002G418200.1","No alias","Sorghum bicolor ","LAV-VAL-type transcription factor & regulatory protein *(VAL) of PRC1 complex","protein_coding"
"Sobic.003G001400.1","No alias","Sorghum bicolor ","component *(NSE5) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.003G011300.1","No alias","Sorghum bicolor ","mRNA decay factor *(PAT1)","protein_coding"
"Sobic.003G011900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G012000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G015400.1","No alias","Sorghum bicolor ","component *(uS6m) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.003G017800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G028600.2","No alias","Sorghum bicolor ","aminoimidazole RN carboxylase *(PUR6)","protein_coding"
"Sobic.003G051000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G052300.1","No alias","Sorghum bicolor ","raffinose synthase","protein_coding"
"Sobic.003G083400.1","No alias","Sorghum bicolor ","myosin adaptor protein *(MadB) & plastid separation myosin adaptor protein *(CLMP)","protein_coding"
"Sobic.003G152800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G209600.2","No alias","Sorghum bicolor ","phosphocholine phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.003G217200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G250500.2","No alias","Sorghum bicolor ","small subunit of U2AF pre-RNA splicing auxiliary factor complex","protein_coding"
"Sobic.003G262500.1","No alias","Sorghum bicolor ","protein de-S-acylation enzyme *(ABAPT)","protein_coding"
"Sobic.003G284700.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase","protein_coding"
"Sobic.003G291300.1","No alias","Sorghum bicolor ","MRM1-type rRNA methyltransferase","protein_coding"
"Sobic.003G308500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G367900.1","No alias","Sorghum bicolor ","component *(LSm3) of U6-associated LSm accessory ribonucleoprotein complex","protein_coding"
"Sobic.003G371250.1","No alias","Sorghum bicolor ","anion transporter *(NRT1/PTR)","protein_coding"
"Sobic.003G398100.1","No alias","Sorghum bicolor ","subfamily ABCB transporter","protein_coding"
"Sobic.003G428100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G431700.1","No alias","Sorghum bicolor ","EC_1.18 oxidoreductase acting on iron-sulfur protein as donor & ferredoxin-NADP oxidoreductase","protein_coding"
"Sobic.004G000300.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase","protein_coding"
"Sobic.004G025800.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G026400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G030200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G082151.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G084300.1","No alias","Sorghum bicolor ","recruitment factor of SWR1 chromatin remodeling complex *(SWC4) & component *(SWC4) shared with NuA4/SWR1 complexes","protein_coding"
"Sobic.004G125700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G129500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G169501.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G175700.1","No alias","Sorghum bicolor ","transcriptional co-activator *(KIWI/KELP) involved in intine formation","protein_coding"
"Sobic.004G203400.1","No alias","Sorghum bicolor ","regulatory protein *(MAF1) of RNA polymerase III","protein_coding"
"Sobic.004G213300.1","No alias","Sorghum bicolor ","regulatory component *(MICU) of MCU calcium uniporter complex","protein_coding"
"Sobic.004G215800.2","No alias","Sorghum bicolor ","regulatory component B of PP2A phosphatase complexes","protein_coding"
"Sobic.004G229100.1","No alias","Sorghum bicolor ","regulatory protein *(FBW2) of RNA-induced silencing complex (RISC) assembly & substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex","protein_coding"
"Sobic.004G272900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G288700.1","No alias","Sorghum bicolor ","plasma membrane intrinsic protein *(PIP)","protein_coding"
"Sobic.004G312600.1","No alias","Sorghum bicolor ","component *(COP1) of COP1-SPA light signal transduction ubiquitin E3 ligase complex & component *(COP1) of substrate adaptor module of CUL4-based ubiquitin ligase complex","protein_coding"
"Sobic.004G313300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G328000.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G339400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G351700.1","No alias","Sorghum bicolor ","C2H2-type subclass ZAT transcription factor","protein_coding"
"Sobic.004G352600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G353800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G354700.1","No alias","Sorghum bicolor ","circadian clock repression factor *(CHE) & TCP-type transcription factor","protein_coding"
"Sobic.004G355700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G045000.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & digalactosyldiacylglycerol synthase","protein_coding"
"Sobic.005G047200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G059200.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G068700.1","No alias","Sorghum bicolor ","NAD kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.005G114000.2","No alias","Sorghum bicolor ","voltage-gated potassium cation channel *(TPK/KCO)","protein_coding"
"Sobic.005G157100.1","No alias","Sorghum bicolor ","tRNA cytidine acetyltransferase adaptor protein","protein_coding"
"Sobic.005G169600.1","No alias","Sorghum bicolor ","plastidial RNA splicing factor *(CFM3)","protein_coding"
"Sobic.005G188900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G199200.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP107)","protein_coding"
"Sobic.005G204200.1","No alias","Sorghum bicolor ","translation peptide chain release factor *(PrfA)","protein_coding"
"Sobic.006G056700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G087700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G106200.1","No alias","Sorghum bicolor ","histone chaperone *(NRP)","protein_coding"
"Sobic.006G145500.3","No alias","Sorghum bicolor ","coniferin beta-glucosidase & EC_3.2 glycosylase","protein_coding"
"Sobic.006G158100.1","No alias","Sorghum bicolor ","tRNA dihydrouridine synthase","protein_coding"
"Sobic.006G164000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G179600.1","No alias","Sorghum bicolor ","RKD-type transcription factor & germ cell differentiation factor *(RKD)","protein_coding"
"Sobic.006G205100.1","No alias","Sorghum bicolor ","RING-H2-class CTL-subclass E3 ubiquitin ligase","protein_coding"
"Sobic.006G214200.1","No alias","Sorghum bicolor ","GABA pyruvate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.006G222600.5","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G226900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G248350.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G254100.1","No alias","Sorghum bicolor ","GTP-cyclohydrolase *(GCH1) & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Sobic.006G257900.1","No alias","Sorghum bicolor ","E2 MUB ubiquitin-conjugating enzyme","protein_coding"
"Sobic.006G263800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G272800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G279100.1","No alias","Sorghum bicolor ","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G280200.4","No alias","Sorghum bicolor ","component *(IDM1) of ROS1-recruitment complex","protein_coding"
"Sobic.007G088600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G116700.1","No alias","Sorghum bicolor ","plastidial alkenal/alkenone oxidoreductase *(AOR) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.007G197400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G204600.1","No alias","Sorghum bicolor ","component *(ISA1) of ISA1-ISA2 isoamylase heterodimer","protein_coding"
"Sobic.007G225500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G001900.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.008G038600.1","No alias","Sorghum bicolor ","diaminopimelate decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.008G051200.1","No alias","Sorghum bicolor ","co-chaperone (GFA2) involved in gametogenesis & co-chaperone *(Hsp40)","protein_coding"
"Sobic.008G129900.1","No alias","Sorghum bicolor ","iron-regulated metal cation transporter *(FPN) & iron cation transporter *(MAR1)","protein_coding"
"Sobic.008G130000.1","No alias","Sorghum bicolor ","chloroplast-to-nucleus signalling factor *(GUN)","protein_coding"
"Sobic.008G136601.1","No alias","Sorghum bicolor ","regulatory protein *(MAF1) of RNA polymerase III","protein_coding"
"Sobic.008G140100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G140200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G173800.2","No alias","Sorghum bicolor ","proton","protein_coding"
"Sobic.008G193200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G004500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G072000.1","No alias","Sorghum bicolor ","aminoimidazole RN synthetase *(PUR5)","protein_coding"
"Sobic.009G083000.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.009G094700.1","No alias","Sorghum bicolor ","FMN hydrolase","protein_coding"
"Sobic.009G118400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G123900.1","No alias","Sorghum bicolor ","component *(uL1c) of large plastid ribosomal-subunit proteome","protein_coding"
"Sobic.009G124600.1","No alias","Sorghum bicolor ","small solute transporter *(BT1)","protein_coding"
"Sobic.009G141400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G167100.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.009G258100.1","No alias","Sorghum bicolor ","calcium-permeable channel *(OSCA)","protein_coding"
"Sobic.010G024600.1","No alias","Sorghum bicolor ","assembly factor IBA57.1 of mitochondrial ISC system transfer phase","protein_coding"
"Sobic.010G027500.1","No alias","Sorghum bicolor ","Kinesin-U-type motor protein","protein_coding"
"Sobic.010G039500.1","No alias","Sorghum bicolor ","pyrimidine phosphatase *(PyrP)","protein_coding"
"Sobic.010G043800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G082500.1","No alias","Sorghum bicolor ","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Sobic.010G085100.1","No alias","Sorghum bicolor ","Kinesin-14-type motor protein & accessory motility factor *(KAC)","protein_coding"
"Sobic.010G100200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G153900.1","No alias","Sorghum bicolor ","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & spermine synthase","protein_coding"
"Sobic.010G169200.3","No alias","Sorghum bicolor ","BEL-type transcription factor","protein_coding"
"Sobic.010G180700.1","No alias","Sorghum bicolor ","phosphatase-type DBP-type transcription factor & clade G phosphatase *(DBP)","protein_coding"
"Sobic.010G188600.1","No alias","Sorghum bicolor ","class III ARF-GAP ARF-GTPase-activating protein","protein_coding"
"Sobic.010G207600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G215600.1","No alias","Sorghum bicolor ","homogentisate phytyltransferase *(HPT)","protein_coding"
"Sobic.010G220500.1","No alias","Sorghum bicolor ","allantoate amidohydrolase","protein_coding"
"Sobic.010G223100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G250200.1","No alias","Sorghum bicolor ","aminodeoxychorismate synthase & EC_2.6 transferase transferring nitrogenous group & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.010G250400.1","No alias","Sorghum bicolor ","protease *(SBT2)","protein_coding"
"Sobic.010G255300.2","No alias","Sorghum bicolor ","protein involved in PS-II assembly *(HCF173)","protein_coding"
"Sobic.010G261500.1","No alias","Sorghum bicolor ","lyso-phosphatidylethanolamine acyltransferase *(LPEAT)","protein_coding"
"Sobic.010G262300.1","No alias","Sorghum bicolor ","regulatory component *(MCUR) of MCU calcium uniporter complex","protein_coding"
"Sobic.010G265300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G266200.1","No alias","Sorghum bicolor ","regulatory protein *(CAP2) involved in anterograde trafficking","protein_coding"
"Sobic.010G277200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g007870","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** AT3G11600.1)","protein_coding"
"Solyc01g008350","No alias","Solanum lycopersicum","LOW QUALITY:DNAJ heat shock N-terminal domain-containing protein (AHRD V3.3 *-* AT1G65280.2)","protein_coding"
"Solyc01g060490","No alias","Solanum lycopersicum","GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)","protein_coding"
"Solyc01g067900","No alias","Solanum lycopersicum","Rapid ALkalinization Factor (AHRD V3.3 *** A0A118JUQ8_CYNCS)","protein_coding"
"Solyc01g079500","No alias","Solanum lycopersicum","Vps51/Vps67 family (components of vesicular transport) protein (AHRD V3.3 *** AT4G02030.1)","protein_coding"
"Solyc01g079520","No alias","Solanum lycopersicum","DNA mismatch repair protein (AHRD V3.3 *** Q6DQL6_PETHY)","protein_coding"
"Solyc01g086690","No alias","Solanum lycopersicum","LOW QUALITY:Sister chromatid cohesion 1 protein 3 (AHRD V3.3 *** W9R9I5_9ROSA)","protein_coding"
"Solyc01g088380","No alias","Solanum lycopersicum","DNA replication helicase (AHRD V3.3 *** AT1G08840.4)","protein_coding"
"Solyc01g091340","No alias","Solanum lycopersicum","Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* A0A0K9P1Y7_ZOSMR)","protein_coding"
"Solyc01g091530","No alias","Solanum lycopersicum","Fasciclin-like arabinogalactan protein (AHRD V3.3 *** E3WHD6_9ROSI)","protein_coding"
"Solyc01g096220","No alias","Solanum lycopersicum","Ras-related protein RABA3 (AHRD V3.3 *** A0A0B2Q7Y9_GLYSO)","protein_coding"
"Solyc01g096650","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1)","protein_coding"
"Solyc01g098900","No alias","Solanum lycopersicum","Protein YIPF (AHRD V3.3 *** K4B0S7_SOLLC)","protein_coding"
"Solyc01g101030","No alias","Solanum lycopersicum","FACT complex subunit SPT16 (AHRD V3.3 *** W9RSN6_9ROSA)","protein_coding"
"Solyc01g102590","No alias","Solanum lycopersicum","Eukaryotic translation initiation factor 3 subunit C (AHRD V3.3 *-* M1BJV6_SOLTU)","protein_coding"
"Solyc01g104520","No alias","Solanum lycopersicum","At3g54630 (AHRD V3.3 *-* A4FVQ9_ARATH)","protein_coding"
"Solyc01g105520","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** I1Q0P7_ORYGL)","protein_coding"
"Solyc01g109400","No alias","Solanum lycopersicum","Flavoprotein wrbA (AHRD V3.3 *** A0A0B0P664_GOSAR)","protein_coding"
"Solyc01g110510","No alias","Solanum lycopersicum","ENTH/VHS family protein (AHRD V3.3 *** A0A061GXX0_THECC)","protein_coding"
"Solyc02g043850","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g055460","No alias","Solanum lycopersicum","Protein disulfide-isomerase (AHRD V3.3 *** A0A0B2RKB0_GLYSO)","protein_coding"
"Solyc02g062650","No alias","Solanum lycopersicum","Laccase (AHRD V3.3 *** I1J8U1_SOYBN)","protein_coding"
"Solyc02g070780","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4B859_SOLLC)","protein_coding"
"Solyc02g079480","No alias","Solanum lycopersicum","FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)","protein_coding"
"Solyc02g080260","No alias","Solanum lycopersicum","Woolly","protein_coding"
"Solyc02g080660","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9RXJ9_RICCO)","protein_coding"
"Solyc02g083600","No alias","Solanum lycopersicum","Cell cycle checkpoint protein RAD17 (AHRD V3.3 *** W9SMX8_9ROSA)","protein_coding"
"Solyc02g083700","No alias","Solanum lycopersicum","Alpha-mannosidase (AHRD V3.3 *** K4BAN8_SOLLC)","protein_coding"
"Solyc02g084720","No alias","Solanum lycopersicum","beta-galactosidase 6","protein_coding"
"Solyc02g084980","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4BB12_SOLLC)","protein_coding"
"Solyc02g085390","No alias","Solanum lycopersicum","chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1)","protein_coding"
"Solyc02g085750","No alias","Solanum lycopersicum","LuxR family transcriptional regulator, putative (AHRD V3.3 *** A0A072U7J6_MEDTR)","protein_coding"
"Solyc02g086470","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061EDJ2_THECC)","protein_coding"
"Solyc02g091780","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g093400","No alias","Solanum lycopersicum","Protein MurJ (AHRD V3.3 *-* A0A1D1XN27_9ARAE)","protein_coding"
"Solyc02g094210","No alias","Solanum lycopersicum","LOW QUALITY:transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** AT5G08391.1)","protein_coding"
"Solyc03g005460","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)","protein_coding"
"Solyc03g007800","No alias","Solanum lycopersicum","Protein timeless like (AHRD V3.3 *** A0A0B2QAC2_GLYSO)","protein_coding"
"Solyc03g013620","No alias","Solanum lycopersicum","LOW QUALITY:NADH dehydrogenase subunit (AHRD V3.3 *-* Q8HSC3_9SOLN)","protein_coding"
"Solyc03g033390","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** A0A061DGH5_THECC)","protein_coding"
"Solyc03g070440","No alias","Solanum lycopersicum","COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)","protein_coding"
"Solyc03g082860","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase (AHRD V3.3 *** W9S1W1_9ROSA)","protein_coding"
"Solyc03g083060","No alias","Solanum lycopersicum","Ribonuclease P protein subunit P38, related protein, putative (AHRD V3.3 *** G7J7F4_MEDTR)","protein_coding"
"Solyc03g112540","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT5G50130.1)","protein_coding"
"Solyc03g114690","No alias","Solanum lycopersicum","WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO)","protein_coding"
"Solyc03g114780","No alias","Solanum lycopersicum","RNA helicase DEAH-box9","protein_coding"
"Solyc03g115050","No alias","Solanum lycopersicum","Replication A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A0B0N129_GOSAR)","protein_coding"
"Solyc03g115740","No alias","Solanum lycopersicum","Xyloglucan alpha-1,6-xylosyltransferase (AHRD V3.3 *** X5MPI5_PINTA)","protein_coding"
"Solyc03g115990","No alias","Solanum lycopersicum","Malate dehydrogenase (AHRD V3.3 *** A0A061G4A3_THECC)","protein_coding"
"Solyc03g118670","No alias","Solanum lycopersicum","Protein sel-1 (AHRD V3.3 *** A0A0B0MWE3_GOSAR)","protein_coding"
"Solyc03g121170","No alias","Solanum lycopersicum","GDSL esterase/lipase family (AHRD V3.3 *** A0A151TNI3_CAJCA)","protein_coding"
"Solyc04g005430","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G78240.2)","protein_coding"
"Solyc04g008600","No alias","Solanum lycopersicum","Zinc knuckle family protein (AHRD V3.3 *** B9HVL9_POPTR)","protein_coding"
"Solyc04g015360","No alias","Solanum lycopersicum","GATA transcription factor (AHRD V3.3 *** K4BQ39_SOLLC)","protein_coding"
"Solyc04g045530","No alias","Solanum lycopersicum","DNA primase large subunit (AHRD V3.3 *** K4BRI2_SOLLC)","protein_coding"
"Solyc04g055110","No alias","Solanum lycopersicum","ARM-repeat/Tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Solyc04g074150","No alias","Solanum lycopersicum","Protein trm112, putative (AHRD V3.3 *** B9SWY6_RICCO)","protein_coding"
"Solyc04g074810","No alias","Solanum lycopersicum","basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT1G72210.1)","protein_coding"
"Solyc04g077470","No alias","Solanum lycopersicum","Cellulose synthase-like protein (AHRD V3.3 *** L0ASJ1_POPTO)","protein_coding"
"Solyc04g078700","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9ICA0_POPTR)","protein_coding"
"Solyc04g082520","No alias","Solanum lycopersicum","glycosyltransferase family protein (DUF23) (AHRD V3.3 *** AT4G37420.1)","protein_coding"
"Solyc05g007150","No alias","Solanum lycopersicum","UDP-galactose transporter, putative (AHRD V3.3 *** B9S297_RICCO)","protein_coding"
"Solyc05g007450","No alias","Solanum lycopersicum","Origin recognition complex, subunit 6 (AHRD V3.3 *** A0A118K386_CYNCS)","protein_coding"
"Solyc05g007870","No alias","Solanum lycopersicum","R2R3MYB transcription factor 117","protein_coding"
"Solyc05g007930","No alias","Solanum lycopersicum","Beta-1,3-galactosyltransferase-like protein (AHRD V3.3 *** G7KFC0_MEDTR)","protein_coding"
"Solyc05g008400","No alias","Solanum lycopersicum","Repressor of RNA polymerase III transcription (AHRD V3.3 *** K4BX14_SOLLC)","protein_coding"
"Solyc05g008780","No alias","Solanum lycopersicum","PROTON PUMP INTERACTOR 1 family protein (AHRD V3.3 *-* U5GXF2_POPTR)","protein_coding"
"Solyc05g009160","No alias","Solanum lycopersicum","Chaperone protein dnaJ 15 (AHRD V3.3 *** DNJ15_ARATH)","protein_coding"
"Solyc05g009660","No alias","Solanum lycopersicum","Transcription factor PERIANTHIA-like protein (AHRD V3.3 *** A0A0B0NQX8_GOSAR)","protein_coding"
"Solyc05g012060","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase ATX1, putative isoform 2 (AHRD V3.3 *-* A0A061E9H7_THECC)","protein_coding"
"Solyc05g014470","No alias","Solanum lycopersicum","glyceraldehyde 3-phosphate dehydrogenase","protein_coding"
"Solyc05g014540","No alias","Solanum lycopersicum","DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)","protein_coding"
"Solyc05g014690","No alias","Solanum lycopersicum","RNA helicase DEAH-box14","protein_coding"
"Solyc05g047630","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc06g008210","No alias","Solanum lycopersicum","breast cancer associated RING 1 (AHRD V3.3 *** AT1G04020.1)","protein_coding"
"Solyc06g035480","No alias","Solanum lycopersicum","Serine/threonine protein phosphatase 7 long form isogeny (AHRD V3.3 *-* A0A151SE46_CAJCA)","protein_coding"
"Solyc06g066600","No alias","Solanum lycopersicum","plastidic glucose translocator 2","protein_coding"
"Solyc06g072660","No alias","Solanum lycopersicum","Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)","protein_coding"
"Solyc06g076660","No alias","Solanum lycopersicum","proliferating cell nuclear antigen","protein_coding"
"Solyc06g082000","No alias","Solanum lycopersicum","PI-phospholipase C6","protein_coding"
"Solyc07g005020","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4CAX4_SOLLC)","protein_coding"
"Solyc07g014650","No alias","Solanum lycopersicum","ADP-ribosylation factor family protein (AHRD V3.3 *** AT2G18390.1)","protein_coding"
"Solyc07g016210","No alias","Solanum lycopersicum","Specific tissue protein (AHRD V3.3 *** G7IZL4_MEDTR)","protein_coding"
"Solyc07g018250","No alias","Solanum lycopersicum","LOW QUALITY:GNS1/SUR4 membrane protein family (AHRD V3.3 *** AT3G06470.1)","protein_coding"
"Solyc07g048050","No alias","Solanum lycopersicum","Auxin-responsive family protein (AHRD V3.3 *** A0A061DLW5_THECC)","protein_coding"
"Solyc07g056390","No alias","Solanum lycopersicum","Endoplasmic oxidoreductin-1, putative (AHRD V3.3 *** B9T812_RICCO)","protein_coding"
"Solyc07g061770","No alias","Solanum lycopersicum","Ankyrin repeat-containing-like protein (AHRD V3.3 *-* A0A061FUD1_THECC)","protein_coding"
"Solyc08g005530","No alias","Solanum lycopersicum","threonine aldolase 1 (AHRD V3.3 --* AT1G08630.7)","protein_coding"
"Solyc08g007680","No alias","Solanum lycopersicum","Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC)","protein_coding"
"Solyc08g008460","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g015840","No alias","Solanum lycopersicum","Receptor-like protein kinase-related family protein (AHRD V3.3 --* AT3G22020.2)","protein_coding"
"Solyc08g077990","No alias","Solanum lycopersicum","Kinase like protein (AHRD V3.3 *-* Q0WPK0_ARATH)","protein_coding"
"Solyc08g079050","No alias","Solanum lycopersicum","transcription factor (AHRD V3.3 *** AT4G22600.1)","protein_coding"
"Solyc08g079630","No alias","Solanum lycopersicum","AT hook, DNA-binding motif-containing protein (AHRD V3.3 *** A0A103XG23_CYNCS)","protein_coding"
"Solyc08g080280","No alias","Solanum lycopersicum","FAM91 carboxy-terminus protein (AHRD V3.3 --* AT1G35220.6)","protein_coding"
"Solyc08g081070","No alias","Solanum lycopersicum","Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT4G11440.2)","protein_coding"
"Solyc08g081370","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT1G63840.1)","protein_coding"
"Solyc08g081850","No alias","Solanum lycopersicum","LOW QUALITY:transmembrane protein, putative (DUF1191) (AHRD V3.3 *** AT4G23720.1)","protein_coding"
"Solyc08g082200","No alias","Solanum lycopersicum","DNA primase (AHRD V3.3 *** K4CPL6_SOLLC)","protein_coding"
"Solyc09g007330","No alias","Solanum lycopersicum","minichromosome maintenance 8 (AHRD V3.3 *** AT3G09660.3)","protein_coding"
"Solyc09g009260","No alias","Solanum lycopersicum","fructose-1,6-bisphosphate aldolase","protein_coding"
"Solyc09g009380","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *-* A0A0K9NMI8_ZOSMR)","protein_coding"
"Solyc09g014240","No alias","Solanum lycopersicum","Laccase (AHRD V3.3 *** P93366_TOBAC)","protein_coding"
"Solyc09g015490","No alias","Solanum lycopersicum","Phosphoenolpyruvate carboxylase (AHRD V3.3 *-* C7DY59_BRANA)","protein_coding"
"Solyc09g042760","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48390.1)","protein_coding"
"Solyc09g090560","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** G7I6L6_MEDTR)","protein_coding"
"Solyc09g091650","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G04730.1)","protein_coding"
"Solyc09g092510","No alias","Solanum lycopersicum","Pyrroline-5-carboxylate reductase (AHRD V3.3 *-* A0A1D1ZGA1_9ARAE)","protein_coding"
"Solyc09g098490","No alias","Solanum lycopersicum","Clathrin interactor EPSIN 3 (AHRD V3.3 *** EPN3_ARATH)","protein_coding"
"Solyc10g007400","No alias","Solanum lycopersicum","DNA polymerase delta subunit 3 (AHRD V3.3 *** A0A0B0NMF9_GOSAR)","protein_coding"
"Solyc10g008320","No alias","Solanum lycopersicum","LOW QUALITY:phosphatidic acid phosphatase 1 (AHRD V3.3 --* AT2G01180.6)","protein_coding"
"Solyc10g011760","No alias","Solanum lycopersicum","Aldose 1-epimerase, putative (AHRD V3.3 *** B9RE17_RICCO)","protein_coding"
"Solyc10g018520","No alias","Solanum lycopersicum","3'-5' exonuclease domain-containing family protein (AHRD V3.3 *** B9I623_POPTR)","protein_coding"
"Solyc10g079090","No alias","Solanum lycopersicum","Chaperone protein dnaJ, putative (AHRD V3.3 *** B9SL79_RICCO)","protein_coding"
"Solyc10g079510","No alias","Solanum lycopersicum","RAD3-like DNA-binding helicase protein (AHRD V3.3 *** AT1G20720.2)","protein_coding"
"Solyc10g081730","No alias","Solanum lycopersicum","TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT2G35880.3)","protein_coding"
"Solyc10g083500","No alias","Solanum lycopersicum","Protein kinase family protein (AHRD V3.3 *-* Q9LZS4_ARATH)","protein_coding"
"Solyc11g005690","No alias","Solanum lycopersicum","TONSOKU protein (AHRD V3.3 *** Q4W7J1_TOBAC)","protein_coding"
"Solyc11g005800","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G64630.2)","protein_coding"
"Solyc11g008670","No alias","Solanum lycopersicum","Chromatin assembly factor 1, subunit A, putative (AHRD V3.3 *** B9RM13_RICCO)","protein_coding"
"Solyc11g013660","No alias","Solanum lycopersicum","transmembrane 50A-like protein (AHRD V3.3 *-* AT1G36980.2)","protein_coding"
"Solyc11g045470","No alias","Solanum lycopersicum","zein-binding protein (Protein of unknown function%2C DUF593) (AHRD V3.3 *-* AT3G54740.8)","protein_coding"
"Solyc11g066060","No alias","Solanum lycopersicum","heat shock protein 70 (AHRD V3.3 *** AT3G12580.1)","protein_coding"
"Solyc11g066830","No alias","Solanum lycopersicum","Zinc finger transcription factor 68","protein_coding"
"Solyc11g069250","No alias","Solanum lycopersicum","Fasciclin-like arabinogalactan protein (AHRD V3.3 *** G7L2R9_MEDTR)","protein_coding"
"Solyc12g042560","No alias","Solanum lycopersicum","Heat shock protein 70 (AHRD V3.3 *-* V5K655_CAPAN)","protein_coding"
"Solyc12g056200","No alias","Solanum lycopersicum","transferring glycosyl group transferase (DUF604) (AHRD V3.3 *** AT4G11350.1)","protein_coding"
"Solyc12g089330","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5)","protein_coding"
"Solyc12g095990","No alias","Solanum lycopersicum","RNA helicase DEAD40","protein_coding"
"Solyc12g096860","No alias","Solanum lycopersicum","thioesterase superfamily protein","protein_coding"
"Solyc12g098810","No alias","Solanum lycopersicum","Chitinase family protein (AHRD V3.3 *** AT1G05850.2)","protein_coding"
"Sopen04g003760","No alias","Solanum pennellii","Replication Fork Protection Component Swi3","protein_coding"
"Sopen05g004230","No alias","Solanum pennellii","Maf1 regulator","protein_coding"