"sequence_id","alias","species","description","type" "101476","No alias","Selaginella moellendorffii ","Leucine-rich repeat family protein","protein_coding" "110731","No alias","Selaginella moellendorffii ","SNARE-like superfamily protein","protein_coding" "124944","No alias","Selaginella moellendorffii ","ARF-GAP domain 8","protein_coding" "127789","No alias","Selaginella moellendorffii ","xyloglucanase 113","protein_coding" "132835","No alias","Selaginella moellendorffii ","3-oxo-5-alpha-steroid 4-dehydrogenase family protein","protein_coding" "135805","No alias","Selaginella moellendorffii ","Concanavalin A-like lectin protein kinase family protein","protein_coding" "144593","No alias","Selaginella moellendorffii ","dormancy-associated protein-like 1","protein_coding" "148275","No alias","Selaginella moellendorffii ","RING domain ligase2","protein_coding" "151094","No alias","Selaginella moellendorffii ","S-formylglutathione hydrolase","protein_coding" "154330","No alias","Selaginella moellendorffii ","regulatory particle non-ATPase 12A","protein_coding" "164063","No alias","Selaginella moellendorffii ","3\'-phosphoinositide-dependent protein kinase 1","protein_coding" "167352","No alias","Selaginella moellendorffii ","Per1-like family protein","protein_coding" "169956","No alias","Selaginella moellendorffii ","Thiamin diphosphate-binding fold (THDP-binding) superfamily protein","protein_coding" "170924","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "171350","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "172410","No alias","Selaginella moellendorffii ","phospholipid sterol acyl transferase 1","protein_coding" "230655","No alias","Selaginella moellendorffii ","phototropin 1","protein_coding" "231153","No alias","Selaginella moellendorffii ","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding" "235482","No alias","Selaginella moellendorffii ","Ran BP2/NZF zinc finger-like superfamily protein","protein_coding" "266549","No alias","Selaginella moellendorffii ","citrate synthase 3","protein_coding" "266703","No alias","Selaginella moellendorffii ","phosphatase-related","protein_coding" "266913","No alias","Selaginella moellendorffii ","20S proteasome beta subunit C2","protein_coding" "268244","No alias","Selaginella moellendorffii ","GHMP kinase family protein","protein_coding" "268247","No alias","Selaginella moellendorffii ","transferases, transferring hexosyl groups","protein_coding" "269184","No alias","Selaginella moellendorffii ","Adaptin family protein","protein_coding" "270282","No alias","Selaginella moellendorffii ","bZIP transcription factor family protein","protein_coding" "271325","No alias","Selaginella moellendorffii ","diphthamide synthesis DPH2 family protein","protein_coding" "271478","No alias","Selaginella moellendorffii ","ubiquitin carrier protein 1","protein_coding" "34445","No alias","Selaginella moellendorffii ","dual specificity protein phosphatase (DsPTP1) family protein","protein_coding" "402871","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding" "404107","No alias","Selaginella moellendorffii ","FtsJ-like methyltransferase family protein","protein_coding" "405518","No alias","Selaginella moellendorffii ","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding" "412739","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "415743","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "417213","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "419617","No alias","Selaginella moellendorffii ","myb family transcription factor","protein_coding" "437383","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding" "440826","No alias","Selaginella moellendorffii ","MEI2-like protein 5","protein_coding" "441095","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "441807","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "441825","No alias","Selaginella moellendorffii ","phospholipase D alpha 1","protein_coding" "444768","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "447578","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "52204","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "58051","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "64042","No alias","Selaginella moellendorffii ","RNI-like superfamily protein","protein_coding" "71450","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "74627","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "80360","No alias","Selaginella moellendorffii ","trehalose phosphatase/synthase 5","protein_coding" "80443","No alias","Selaginella moellendorffii ","SNF1 kinase homolog 10","protein_coding" "83918","No alias","Selaginella moellendorffii ","pyrimidine 2","protein_coding" "84263","No alias","Selaginella moellendorffii ","BNR/Asp-box repeat family protein","protein_coding" "84281","No alias","Selaginella moellendorffii ","Bax inhibitor-1 family protein","protein_coding" "88599","No alias","Selaginella moellendorffii ","MUTS-like protein 4","protein_coding" "927","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "93278","No alias","Selaginella moellendorffii ","ammonium transporter 2","protein_coding" "95614","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "96090","No alias","Selaginella moellendorffii ","asparagine-linked glycosylation 3","protein_coding" "97895","No alias","Selaginella moellendorffii ","Surfeit locus 1 cytochrome c oxidase biogenesis protein","protein_coding" "A4A49_02662","No alias","Nicotiana attenuata","dol-p-man:man(5)glcnac(2)-pp-dol alpha-1,3-mannosyltransferase","protein_coding" "A4A49_13616","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "AC150739.3_FG001","No alias","Zea mays","AT hook motif DNA-binding family protein","protein_coding" "AC187559.2_FG013","No alias","Zea mays","Function unknown","protein_coding" "AC201977.3_FG005","No alias","Zea mays","Function unknown","protein_coding" "At1g03330","No alias","Arabidopsis thaliana","Sm-like protein LSM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W785]","protein_coding" "At1g05260","No alias","Arabidopsis thaliana","Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]","protein_coding" "At1g09080","No alias","Arabidopsis thaliana","Probable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]","protein_coding" "At1g11880","No alias","Arabidopsis thaliana","GPI mannosyltransferase 2 [Source:UniProtKB/TrEMBL;Acc:Q6NKT6]","protein_coding" "At1g12950","No alias","Arabidopsis thaliana","Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]","protein_coding" "At1g17830","No alias","Arabidopsis thaliana","At1g17830 [Source:UniProtKB/TrEMBL;Acc:Q9LMU5]","protein_coding" "At1g19410","No alias","Arabidopsis thaliana","FBD / Leucine Rich Repeat domains containing protein [Source:UniProtKB/TrEMBL;Acc:F4HP61]","protein_coding" "At1g23360","No alias","Arabidopsis thaliana","2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3ED65]","protein_coding" "At1g27160","No alias","Arabidopsis thaliana","Valyl-tRNA synthetase / valine-tRNA ligase-like protein [Source:UniProtKB/TrEMBL;Acc:F4HR51]","protein_coding" "At1g28640","No alias","Arabidopsis thaliana","GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT1G28640]","protein_coding" "At1g29070","No alias","Arabidopsis thaliana","50S ribosomal protein L34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LP37]","protein_coding" "At1g30100","No alias","Arabidopsis thaliana","Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]","protein_coding" "At1g32660","No alias","Arabidopsis thaliana","Putative F-box protein At1g32660 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPJ7]","protein_coding" "At1g49790","No alias","Arabidopsis thaliana","F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:F4I3E1]","protein_coding" "At1g52910","No alias","Arabidopsis thaliana","At1g52910 [Source:UniProtKB/TrEMBL;Acc:Q9C930]","protein_coding" "At1g61160","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (so /.../NCBI BLink). [Source:TAIR;Acc:AT1G61160]","protein_coding" "At1g62210","No alias","Arabidopsis thaliana","F19K23.14 protein [Source:UniProtKB/TrEMBL;Acc:O04586]","protein_coding" "At1g65690","No alias","Arabidopsis thaliana","NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]","protein_coding" "At1g71680","No alias","Arabidopsis thaliana","Lysine histidine transporter-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9J0]","protein_coding" "At1g72100","No alias","Arabidopsis thaliana","Late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9C7H3]","protein_coding" "At2g03870","No alias","Arabidopsis thaliana","LSM7 [Source:UniProtKB/TrEMBL;Acc:A0A178VPR3]","protein_coding" "At2g04440","No alias","Arabidopsis thaliana","MutT/nudix family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJC5]","protein_coding" "At2g15530","No alias","Arabidopsis thaliana","RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIG9]","protein_coding" "At2g18190","No alias","Arabidopsis thaliana","AAA-ATPase At2g18190 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG2]","protein_coding" "At2g19280","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At2g19280 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKW7]","protein_coding" "At2g20320","No alias","Arabidopsis thaliana","DENN (AEX-3) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IUH2]","protein_coding" "At2g23100","No alias","Arabidopsis thaliana","Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:F4ILF9]","protein_coding" "At2g26390","No alias","Arabidopsis thaliana","Serpin-Z3 [Source:UniProtKB/Swiss-Prot;Acc:O48706]","protein_coding" "At2g35390","No alias","Arabidopsis thaliana","Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]","protein_coding" "At2g37770","No alias","Arabidopsis thaliana","NADPH-dependent aldo-keto reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0PGJ6]","protein_coding" "At2g40250","No alias","Arabidopsis thaliana","GDSL esterase/lipase At2g40250 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ6]","protein_coding" "At2g47760","No alias","Arabidopsis thaliana","Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:O82244]","protein_coding" "At2g47770","No alias","Arabidopsis thaliana","TSPO [Source:UniProtKB/TrEMBL;Acc:A0A178W1Q1]","protein_coding" "At2g48150","No alias","Arabidopsis thaliana","Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]","protein_coding" "At3g06640","No alias","Arabidopsis thaliana","PAS domain-containing protein tyrosine kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4JC18]","protein_coding" "At3g13950","No alias","Arabidopsis thaliana","AT3G13950 protein [Source:UniProtKB/TrEMBL;Acc:B9DG91]","protein_coding" "At3g19230","No alias","Arabidopsis thaliana","Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JB46]","protein_coding" "At3g48020","No alias","Arabidopsis thaliana","At3g48020 [Source:UniProtKB/TrEMBL;Acc:Q9SU65]","protein_coding" "At3g49770","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0C6]","protein_coding" "At3g50850","No alias","Arabidopsis thaliana","At3g50850 [Source:UniProtKB/TrEMBL;Acc:Q9SVL4]","protein_coding" "At3g52810","No alias","Arabidopsis thaliana","Purple acid phosphatase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXI4]","protein_coding" "At3g56820","No alias","Arabidopsis thaliana","AT3g56820/T8M16_150 [Source:UniProtKB/TrEMBL;Acc:Q94EG4]","protein_coding" "At3g57190","No alias","Arabidopsis thaliana","PrfB3 [Source:UniProtKB/TrEMBL;Acc:A0A178VAE2]","protein_coding" "At3g58020","No alias","Arabidopsis thaliana","Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXJ5]","protein_coding" "At3g62400","No alias","Arabidopsis thaliana","unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT3G62400]","protein_coding" "At4g00190","No alias","Arabidopsis thaliana","Putative pectinesterase/pectinesterase inhibitor 38 [Source:UniProtKB/Swiss-Prot;Acc:O81320]","protein_coding" "At4g03320","No alias","Arabidopsis thaliana","Protein TIC 20-IV, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQZ9]","protein_coding" "At4g11340","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9SUS7]","protein_coding" "At4g12270","No alias","Arabidopsis thaliana","Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q9STI4]","protein_coding" "At4g12510","No alias","Arabidopsis thaliana","At4g12520 [Source:UniProtKB/TrEMBL;Acc:Q9S7U3]","protein_coding" "At4g14340","No alias","Arabidopsis thaliana","Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]","protein_coding" "At4g16566","No alias","Arabidopsis thaliana","histidine triad nucleotide-binding 4 [Source:TAIR;Acc:AT4G16566]","protein_coding" "At4g21160","No alias","Arabidopsis thaliana","ZAC [Source:UniProtKB/TrEMBL;Acc:A0A178UUS8]","protein_coding" "At4g23520","No alias","Arabidopsis thaliana","Probable cysteine protease RDL6 [Source:UniProtKB/Swiss-Prot;Acc:F4JNL3]","protein_coding" "At4g24110","No alias","Arabidopsis thaliana","NADP-specific glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:O22980]","protein_coding" "At4g26560","No alias","Arabidopsis thaliana","Calcineurin B-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUA6]","protein_coding" "At4g26920","No alias","Arabidopsis thaliana","Putative homeodomain protein [Source:UniProtKB/TrEMBL;Acc:Q9M0J8]","protein_coding" "At4g37990","No alias","Arabidopsis thaliana","Cinnamyl alcohol dehydrogenase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q02972]","protein_coding" "At4g38330","No alias","Arabidopsis thaliana","At4g38330 [Source:UniProtKB/TrEMBL;Acc:Q9SVF2]","protein_coding" "At5g03610","No alias","Arabidopsis thaliana","GDSL esterase/lipase At5g03610 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS7]","protein_coding" "At5g05370","No alias","Arabidopsis thaliana","At5g05370 [Source:UniProtKB/TrEMBL;Acc:Q9FLB7]","protein_coding" "At5g06760","No alias","Arabidopsis thaliana","LEA4-5 [Source:UniProtKB/TrEMBL;Acc:A0A178UIZ0]","protein_coding" "At5g07950","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8LA67]","protein_coding" "At5g25910","No alias","Arabidopsis thaliana","Receptor-like protein 52 [Source:UniProtKB/Swiss-Prot;Acc:Q7FZR1]","protein_coding" "At5g27340","No alias","Arabidopsis thaliana","unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). [Source:TAIR;Acc:AT5G27340]","protein_coding" "At5g39190","No alias","Arabidopsis thaliana","Germin-like protein subfamily 1 member 20 [Source:UniProtKB/Swiss-Prot;Acc:P92996]","protein_coding" "At5g43100","No alias","Arabidopsis thaliana","Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:F4K4L3]","protein_coding" "At5g48130","No alias","Arabidopsis thaliana","BTB/POZ domain-containing protein At5g48130 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUB9]","protein_coding" "At5g51620","No alias","Arabidopsis thaliana","Uncharacterised protein family (UPF0172) [Source:TAIR;Acc:AT5G51620]","protein_coding" "At5g59440","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KJ62]","protein_coding" "At5g59760","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q58FT1]","protein_coding" "At5g60130","No alias","Arabidopsis thaliana","B3 domain-containing protein At5g60130 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG1]","protein_coding" "At5g60250","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9LSS2]","protein_coding" "At5g62490","No alias","Arabidopsis thaliana","HVA22-like protein b [Source:UniProtKB/Swiss-Prot;Acc:Q9SYX7]","protein_coding" "At5g63130","No alias","Arabidopsis thaliana","At5g63130 [Source:UniProtKB/TrEMBL;Acc:Q9FML0]","protein_coding" "At5g63905","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; Has 30201 Blast hits to 17322 p /.../s in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G63905]","protein_coding" "Bradi1g01090","No alias","Brachypodium distachyon","ARF-GAP domain 9","protein_coding" "Bradi1g04850","No alias","Brachypodium distachyon","protein phosphatase 2A-4","protein_coding" "Bradi1g08270","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "Bradi1g11500","No alias","Brachypodium distachyon","DYNAMIN-like 1C","protein_coding" "Bradi1g11817","No alias","Brachypodium distachyon","chloride channel D","protein_coding" "Bradi1g23340","No alias","Brachypodium distachyon","WRKY family transcription factor family protein","protein_coding" "Bradi1g26930","No alias","Brachypodium distachyon","peptide-N-glycanase 1","protein_coding" "Bradi1g27990","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding" "Bradi1g37311","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g37590","No alias","Brachypodium distachyon","transmembrane nine 7","protein_coding" "Bradi1g42257","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi1g42620","No alias","Brachypodium distachyon","Uncharacterised conserved protein (UCP030210)","protein_coding" "Bradi1g46550","No alias","Brachypodium distachyon","CTC-interacting domain 7","protein_coding" "Bradi1g49497","No alias","Brachypodium distachyon","SEUSS-like 3","protein_coding" "Bradi1g51210","No alias","Brachypodium distachyon","Coatomer, beta\' subunit","protein_coding" "Bradi1g54537","No alias","Brachypodium distachyon","exocyst complex component 84B","protein_coding" "Bradi1g55947","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g57080","No alias","Brachypodium distachyon","ubiquitin-specific protease 11","protein_coding" "Bradi1g60700","No alias","Brachypodium distachyon","transthyretin-like protein","protein_coding" "Bradi1g63540","No alias","Brachypodium distachyon","ALG6, ALG8 glycosyltransferase family","protein_coding" "Bradi1g68600","No alias","Brachypodium distachyon","hydroxyproline-rich glycoprotein family protein","protein_coding" "Bradi1g69000","No alias","Brachypodium distachyon","coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative","protein_coding" "Bradi1g76314","No alias","Brachypodium distachyon","ubiquitin family protein","protein_coding" "Bradi1g76400","No alias","Brachypodium distachyon","Calcium-binding EF hand family protein","protein_coding" "Bradi2g04440","No alias","Brachypodium distachyon","asparagine-linked glycosylation 3","protein_coding" "Bradi2g09177","No alias","Brachypodium distachyon","zinc finger (CCCH type) helicase family protein","protein_coding" "Bradi2g09707","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g11230","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding" "Bradi2g13730","No alias","Brachypodium distachyon","HEAT repeat-containing protein","protein_coding" "Bradi2g15532","No alias","Brachypodium distachyon","peroxin 14","protein_coding" "Bradi2g17090","No alias","Brachypodium distachyon","dynamin-like protein","protein_coding" "Bradi2g17947","No alias","Brachypodium distachyon","SMAD/FHA domain-containing protein","protein_coding" "Bradi2g21040","No alias","Brachypodium distachyon","RING 1A","protein_coding" "Bradi2g23120","No alias","Brachypodium distachyon","RAB GTPase homolog 8A","protein_coding" "Bradi2g26807","No alias","Brachypodium distachyon","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding" "Bradi2g28157","No alias","Brachypodium distachyon","cation-chloride co-transporter 1","protein_coding" "Bradi2g33020","No alias","Brachypodium distachyon","Sec20 family protein","protein_coding" "Bradi2g33550","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g33676","No alias","Brachypodium distachyon","heat shock protein 91","protein_coding" "Bradi2g35040","No alias","Brachypodium distachyon","Protein of unknown function (DUF1624)","protein_coding" "Bradi2g36230","No alias","Brachypodium distachyon","SAD1/UNC-84 domain protein 2","protein_coding" "Bradi2g44340","No alias","Brachypodium distachyon","SCP1-like small phosphatase 4","protein_coding" "Bradi2g46680","No alias","Brachypodium distachyon","GPI transamidase component family protein / Gaa1-like family protein","protein_coding" "Bradi2g49860","No alias","Brachypodium distachyon","winged-helix DNA-binding transcription factor family protein","protein_coding" "Bradi2g51430","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g52450","No alias","Brachypodium distachyon","Disease resistance protein (CC-NBS-LRR class) family","protein_coding" "Bradi3g05140","No alias","Brachypodium distachyon","Cysteine proteinases superfamily protein","protein_coding" "Bradi3g06930","No alias","Brachypodium distachyon","Citrate synthase family protein","protein_coding" "Bradi3g09067","No alias","Brachypodium distachyon","GSK3/SHAGGY-like protein kinase 1","protein_coding" "Bradi3g10067","No alias","Brachypodium distachyon","myb domain protein 3r-4","protein_coding" "Bradi3g10690","No alias","Brachypodium distachyon","Family of unknown function (DUF572)","protein_coding" "Bradi3g10720","No alias","Brachypodium distachyon","regulatory particle triple-A ATPase 3","protein_coding" "Bradi3g12880","No alias","Brachypodium distachyon","RNA-binding KH domain-containing protein","protein_coding" "Bradi3g32780","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Bradi3g34620","No alias","Brachypodium distachyon","clathrin adaptor complexes medium subunit family protein","protein_coding" "Bradi3g34900","No alias","Brachypodium distachyon","dsRNA-binding protein 2","protein_coding" "Bradi3g40230","No alias","Brachypodium distachyon","serine/threonine phosphatase 7","protein_coding" "Bradi3g40920","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g42080","No alias","Brachypodium distachyon","Ubiquitin-like superfamily protein","protein_coding" "Bradi3g47580","No alias","Brachypodium distachyon","ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein","protein_coding" "Bradi3g48360","No alias","Brachypodium distachyon","Integrin-linked protein kinase family","protein_coding" "Bradi3g48580","No alias","Brachypodium distachyon","binding","protein_coding" "Bradi3g49447","No alias","Brachypodium distachyon","ARF-GAP domain 2","protein_coding" "Bradi3g50310","No alias","Brachypodium distachyon","FUS3-complementing gene 1","protein_coding" "Bradi3g50590","No alias","Brachypodium distachyon","Diacylglycerol kinase family protein","protein_coding" "Bradi3g54597","No alias","Brachypodium distachyon","Adaptor protein complex AP-1, gamma subunit","protein_coding" "Bradi3g60040","No alias","Brachypodium distachyon","Alkaline-phosphatase-like family protein","protein_coding" "Bradi4g02740","No alias","Brachypodium distachyon","calcineurin B-like 3","protein_coding" "Bradi4g05710","No alias","Brachypodium distachyon","conserved oligomeric Golgi complex component-related / COG complex component-related","protein_coding" "Bradi4g06960","No alias","Brachypodium distachyon","transferases, transferring hexosyl groups","protein_coding" "Bradi4g08110","No alias","Brachypodium distachyon","Putative endonuclease or glycosyl hydrolase","protein_coding" "Bradi4g08820","No alias","Brachypodium distachyon","AMP-dependent synthetase and ligase family protein","protein_coding" "Bradi4g19570","No alias","Brachypodium distachyon","Sec23/Sec24 protein transport family protein","protein_coding" "Bradi4g26487","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Bradi5g07270","No alias","Brachypodium distachyon","endoplasmic reticulum retention defective 2B","protein_coding" "Bradi5g08200","No alias","Brachypodium distachyon","DNAJ heat shock N-terminal domain-containing protein","protein_coding" "Bradi5g08610","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g10432","No alias","Brachypodium distachyon","DNA helicase (RECQl4A)","protein_coding" "Bradi5g13860","No alias","Brachypodium distachyon","glucose-6-phosphate dehydrogenase 6","protein_coding" "Bradi5g17160","No alias","Brachypodium distachyon","long-chain base (LCB) kinase 1","protein_coding" "Bradi5g20510","No alias","Brachypodium distachyon","ENTH/VHS family protein","protein_coding" "Bradi5g21097","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding" "Bradi5g22430","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi5g25450","No alias","Brachypodium distachyon","actin-related protein 8","protein_coding" "Bradi5g26480","No alias","Brachypodium distachyon","Peptidase family C54 protein","protein_coding" "Brara.A00076.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A00101.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A00738.1","No alias","Brassica rapa","subunit f of ATP synthase membrane MF0 subcomplex","protein_coding" "Brara.A01009.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01210.1","No alias","Brassica rapa","class-C-V small heat-shock-responsive protein","protein_coding" "Brara.A01599.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02256.1","No alias","Brassica rapa","regulatory mediator of IRE1-bZIP60 UPR pathway","protein_coding" "Brara.A02629.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02656.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02812.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02868.1","No alias","Brassica rapa","subcluster H/CPL3-4 phosphatase","protein_coding" "Brara.A02946.1","No alias","Brassica rapa","UBQ ubiquitin-fold protein","protein_coding" "Brara.A03048.1","No alias","Brassica rapa","sugar efflux transporter *(SWEET)","protein_coding" "Brara.A03392.1","No alias","Brassica rapa","Fasciclin-type arabinogalactan protein","protein_coding" "Brara.A03519.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03691.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03712.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03876.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03925.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.A03952.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00281.1","No alias","Brassica rapa","circadian clock repression factor *(CHE) & TCP-type transcription factor","protein_coding" "Brara.B00562.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01195.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01357.1","No alias","Brassica rapa","phosphometabolite transporter *(TPT/PPT/GPT/XPT)","protein_coding" "Brara.B01409.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01579.1","No alias","Brassica rapa","STEROLEOSIN-type dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Brara.B01615.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01729.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01731.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01780.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B02043.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B02094.1","No alias","Brassica rapa","assembly factor ISD11 of mitochondrial ISC system assembly phase","protein_coding" "Brara.B02201.1","No alias","Brassica rapa","EC_1.3 oxidoreductase acting on CH-CH group of donor & isoflavone reductase","protein_coding" "Brara.B02342.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B02400.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex","protein_coding" "Brara.B02777.1","No alias","Brassica rapa","tetra-acyl-disaccharide kinase *(LpxK)","protein_coding" "Brara.B03030.1","No alias","Brassica rapa","fucosyl transferase (ESMD) involved in pectin-dependent cell adhesion","protein_coding" "Brara.B03168.1","No alias","Brassica rapa","EC_2.8 transferase transferring sulfur-containing group","protein_coding" "Brara.B03587.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.B03595.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03622.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03623.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00034.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding" "Brara.C00228.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.C00321.1","No alias","Brassica rapa","diacylglycerol kinase","protein_coding" "Brara.C00434.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00495.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00593.1","No alias","Brassica rapa","component *(NFRKB2) of INO80 chromatin remodeling complex","protein_coding" "Brara.C00810.1","No alias","Brassica rapa","MLK protein kinase & protein kinase *(MLK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C00816.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00935.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C01135.1","No alias","Brassica rapa","component *(SWC6) of SWR1 chromatin remodeling complex","protein_coding" "Brara.C01262.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.C01448.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C01558.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C01775.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C01917.1","No alias","Brassica rapa","deubiquitinase *(OTU3-4)","protein_coding" "Brara.C01930.1","No alias","Brassica rapa","receptor component *(PYL/RCAR) of cytoplasm-localized abscisic acid receptor complex","protein_coding" "Brara.C02012.1","No alias","Brassica rapa","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C02375.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02632.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & fructose kinase","protein_coding" "Brara.C02866.1","No alias","Brassica rapa","anion channel *(QUAC/ALMT)","protein_coding" "Brara.C03063.1","No alias","Brassica rapa","R-loop reader protein *(ALBA1/2)","protein_coding" "Brara.C03104.1","No alias","Brassica rapa","RALF/RALFL precursor polypeptide","protein_coding" "Brara.C03156.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C03258.1","No alias","Brassica rapa","subunit zeta of cargo adaptor F-subcomplex","protein_coding" "Brara.C03378.1","No alias","Brassica rapa","typical 2-Cys peroxiredoxin *(2-CysPrx) & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding" "Brara.C03825.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding" "Brara.C04321.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C04338.1","No alias","Brassica rapa","phosphatidate phosphatase *(LPP-epsilon)","protein_coding" "Brara.C04362.1","No alias","Brassica rapa","small GTPase *(ROP)","protein_coding" "Brara.D00058.1","No alias","Brassica rapa","1,6-alpha-xylosyltransferase *(XXT)","protein_coding" "Brara.D00155.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00221.1","No alias","Brassica rapa","MADS/AGL-type transcription factor","protein_coding" "Brara.D00300.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.D00379.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00635.1","No alias","Brassica rapa","AHL clade-A transcription factor","protein_coding" "Brara.D00852.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00867.1","No alias","Brassica rapa","GeBP-type transcription factor","protein_coding" "Brara.D00982.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01009.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01147.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01158.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01475.1","No alias","Brassica rapa","component *(ADA1) of SAGA transcription co-activator complex","protein_coding" "Brara.D01575.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01637.1","No alias","Brassica rapa","ROP-activating protein *(RopGAP)","protein_coding" "Brara.D01789.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02036.1","No alias","Brassica rapa","glycolipid transfer protein *(GLTP)","protein_coding" "Brara.D02290.1","No alias","Brassica rapa","actin filament protein","protein_coding" "Brara.D02337.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02357.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(CYP22) & EC_5.2 cis-trans-isomerase","protein_coding" "Brara.D02389.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02499.1","No alias","Brassica rapa","protein S-acyltransferase *(PAT1-9)","protein_coding" "Brara.D02568.1","No alias","Brassica rapa","transcriptional co-activator *(FBH) & bHLH-type transcription factor","protein_coding" "Brara.D02632.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02695.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.D02714.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00015.1","No alias","Brassica rapa","alpha-1,3-mannosyltransferase *(ALG3) & EC_2.4 glycosyltransferase","protein_coding" "Brara.E00082.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00147.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00214.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00457.1","No alias","Brassica rapa","regulatory protein *(CYCP(CYCU) of cell cycle","protein_coding" "Brara.E00500.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00553.1","No alias","Brassica rapa","receptor component *(PYL/RCAR) of cytoplasm-localized abscisic acid receptor complex","protein_coding" "Brara.E00560.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00701.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding" "Brara.E00956.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E00967.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01094.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01160.1","No alias","Brassica rapa","cofactor of plastid-encoded RNA polymerase *(TAC18)","protein_coding" "Brara.E01469.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01500.1","No alias","Brassica rapa","scaffold protein *(TTL) of brassinosteroid signalling","protein_coding" "Brara.E01551.1","No alias","Brassica rapa","CDK9 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.E01834.1","No alias","Brassica rapa","glucuronoxylan 4-O-methyltransferase","protein_coding" "Brara.E01940.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E02512.1","No alias","Brassica rapa","nitrilespecifier protein","protein_coding" "Brara.E02678.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E02839.1","No alias","Brassica rapa","Fasciclin-type arabinogalactan protein","protein_coding" "Brara.E02901.1","No alias","Brassica rapa","MADS/AGL-type transcription factor","protein_coding" "Brara.E03081.1","No alias","Brassica rapa","G-protein-coupled receptor-like regulator (7TM)","protein_coding" "Brara.E03099.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E03346.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F00359.1","No alias","Brassica rapa","URK-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.F00474.1","No alias","Brassica rapa","3-ketoacyl-CoA synthase *(KCS)","protein_coding" "Brara.F00509.1","No alias","Brassica rapa","UDP-D-apiose / UPD-D-xylose synthetase","protein_coding" "Brara.F00812.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01072.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01411.1","No alias","Brassica rapa","NADPH-oxidase *(Rboh)","protein_coding" "Brara.F01427.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01775.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.F01912.1","No alias","Brassica rapa","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.F01914.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding" "Brara.F02308.1","No alias","Brassica rapa","bifunctional GTP cyclohydrolase II *(RibA) and DHBP synthase *(RibB) & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding" "Brara.F02439.1","No alias","Brassica rapa","organic anion transporter *(OATP)","protein_coding" "Brara.F02580.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F02684.1","No alias","Brassica rapa","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding" "Brara.F02930.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.F03250.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G00066.1","No alias","Brassica rapa","transcriptional repressor *(TIE/SPL)","protein_coding" "Brara.G00434.1","No alias","Brassica rapa","endoribonuclease *(RNase E)","protein_coding" "Brara.G00536.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G00554.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G00595.1","No alias","Brassica rapa","triterpenoid synthase & EC_5.4 intramolecular transferase & cycloartenol synthase","protein_coding" "Brara.G00693.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G00941.1","No alias","Brassica rapa","D-2-hydroxyglutarate synthas","protein_coding" "Brara.G01009.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.G01289.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase","protein_coding" "Brara.G01439.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G01495.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G01671.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.G01755.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.G01889.1","No alias","Brassica rapa","component *(mS47) of small mitoribosomal-subunit proteome & EC_3.1 hydrolase acting on ester bond","protein_coding" "Brara.G02232.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02338.1","No alias","Brassica rapa","ER tubulae formation factor *(RHD3/RL)","protein_coding" "Brara.G02439.1","No alias","Brassica rapa","ARF-GTPase *(ARF1)","protein_coding" "Brara.G02602.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.G02618.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02656.1","No alias","Brassica rapa","E3 ubiquitin ligase *(SINA)","protein_coding" "Brara.G02667.1","No alias","Brassica rapa","histone chaperone *(ASF1)","protein_coding" "Brara.G02717.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02749.1","No alias","Brassica rapa","component *(COG5) of COG (Conserved-Oligomeric Golgi) complex","protein_coding" "Brara.G02914.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.G02936.1","No alias","Brassica rapa","component *(SNL) of histone deacetylase machineries","protein_coding" "Brara.G03579.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H00002.1","No alias","Brassica rapa","regulatory component *(ALIS) of phospholipid flippase complex & regulatory component *(ALIS) of ALA-ALIS flippase complex","protein_coding" "Brara.H00560.1","No alias","Brassica rapa","transcription factor *(ANAC13/17) & NAC-type transcription factor","protein_coding" "Brara.H00793.1","No alias","Brassica rapa","EC_3.2 glycosylase & myrosinase","protein_coding" "Brara.H00794.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H00966.1","No alias","Brassica rapa","SnRK3 SNF1-related protein kinase & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.H00968.1","No alias","Brassica rapa","brassinosteroid signalling protein kinase *(BIN2) & GSK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.H01098.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01208.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01345.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01351.1","No alias","Brassica rapa","nuclear lamina CRWN-interacting protein *(KAKU4)","protein_coding" "Brara.H01570.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01641.1","No alias","Brassica rapa","regulatory component of isocitrate dehydrogenase heterodimer & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Brara.H02115.1","No alias","Brassica rapa","RAV/NGATHA-type transcription factor & AP2-RAV-type transcription factor *(EDF)","protein_coding" "Brara.H02213.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H02325.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H02371.1","No alias","Brassica rapa","beta-1,2-arabinosyltransferase *(RRA)","protein_coding" "Brara.H02527.1","No alias","Brassica rapa","subunit gamma of peripheral CF1 subcomplex of ATP synthase complex","protein_coding" "Brara.H02685.1","No alias","Brassica rapa","mannosyltransferase-II *(PIG-V)","protein_coding" "Brara.H02826.1","No alias","Brassica rapa","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding" "Brara.H02932.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00097.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00129.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00213.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00276.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00306.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00378.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00496.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-13 transcription factor","protein_coding" "Brara.I00643.1","No alias","Brassica rapa","mRNA endoribonuclease *(G3BP)","protein_coding" "Brara.I00727.1","No alias","Brassica rapa","deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & component *(HDA6) of histone deacetylation complex & histone deacetylase *(HDA8)","protein_coding" "Brara.I01237.1","No alias","Brassica rapa","RLCK-XII receptor-like protein kinase & brassinosteroid signalling protein kinase *(BSK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I01362.1","No alias","Brassica rapa","Serpin protease inhibitor","protein_coding" "Brara.I01492.1","No alias","Brassica rapa","EC_4.2 carbon-oxygen lyase","protein_coding" "Brara.I01835.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I01898.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I02215.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I02227.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding" "Brara.I02276.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I02909.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding" "Brara.I03008.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding" "Brara.I03037.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding" "Brara.I03091.1","No alias","Brassica rapa","scaffold component A of PP2A phosphatase complexes & scaffold component *(PP2A-phosphatase) of TTP preprophase band formation complex","protein_coding" "Brara.I03208.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03299.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I03353.1","No alias","Brassica rapa","serine hydroxymethyltransferase *(SHM) & serine hydroxymethyltransferase *(MSA1) & EC_2.1 transferase transferring one-carbon group","protein_coding" "Brara.I03563.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03579.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03709.1","No alias","Brassica rapa","SRS-type transcription factor","protein_coding" "Brara.I04022.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I04085.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I04111.1","No alias","Brassica rapa","MAP-kinase protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I04146.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.I04237.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "Brara.I04266.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding" "Brara.I04283.1","No alias","Brassica rapa","glutamate O-carboxy-methyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding" "Brara.I04327.1","No alias","Brassica rapa","galacturonosyltransferase","protein_coding" "Brara.I04488.1","No alias","Brassica rapa","protein de-S-acylation enzyme *(ABAPT)","protein_coding" "Brara.I04506.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I04538.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.I04568.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding" "Brara.I04774.1","No alias","Brassica rapa","alpha-1,4-mannosyltransferase *(PIG-M)","protein_coding" "Brara.I04806.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-21 transcription factor","protein_coding" "Brara.I04871.1","No alias","Brassica rapa","processivity component *(REV7) of DNA polymerase zeta complex","protein_coding" "Brara.I05038.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I05154.1","No alias","Brassica rapa","mannosyltransferase-II *(PIG-V)","protein_coding" "Brara.I05407.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.I05462.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.I05523.1","No alias","Brassica rapa","glutaredoxin","protein_coding" "Brara.J00202.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00356.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00539.1","No alias","Brassica rapa","component *(SDH5) of succinate dehydrogenase complex","protein_coding" "Brara.J00566.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00720.1","No alias","Brassica rapa","E3 ubiquitin protein ligase *(PUB51) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.J00732.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00954.1","No alias","Brassica rapa","pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase","protein_coding" "Brara.J01182.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J01308.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J01431.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J01630.1","No alias","Brassica rapa","aspartate aminotransferase & EC_2.6 transferase transferring nitrogenous group","protein_coding" "Brara.J01834.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J01904.1","No alias","Brassica rapa","ubiquitin-proteasome shuttle factor *(RAD23)","protein_coding" "Brara.J02461.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J02466.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J02496.1","No alias","Brassica rapa","nucleotide exchange factor *(BAG)","protein_coding" "Brara.J02624.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "Brara.J02859.1","No alias","Brassica rapa","gravity signalling E3 ubiquitin ligase *(SGR9)","protein_coding" "Brara.K00013.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K00043.1","No alias","Brassica rapa","diacylglycerol kinase","protein_coding" "Brara.K00056.1","No alias","Brassica rapa","transcription factor *(CRF) & subgroup ERF-VI transcription factor","protein_coding" "Brara.K00105.1","No alias","Brassica rapa","2S albumin seed storage protein *(SESA)","protein_coding" "Brara.K00155.1","No alias","Brassica rapa","subunit g of ATP synthase membrane MF0 subcomplex","protein_coding" "Brara.K00319.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-4 transcription factor","protein_coding" "Brara.K00471.1","No alias","Brassica rapa","brassinosteroid signalling protein kinase *(BSK) & RLCK-XII receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.K00489.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding" "Brara.K00540.1","No alias","Brassica rapa","lysophosphatidate acyltransferase *(ATS2)","protein_coding" "Brara.K00610.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K00686.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K00824.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K00925.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K01111.1","No alias","Brassica rapa","cofactor of plastid-encoded RNA polymerase *(TAC18)","protein_coding" "Brara.K01188.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K01201.1","No alias","Brassica rapa","alpha-1,4-mannosyltransferase *(PIG-M)","protein_coding" "Brara.K01304.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K01895.1","No alias","Brassica rapa","Unknown function","protein_coding" "Cre01.g002950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g043600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g047218","No alias","Chlamydomonas reinhardtii","Uncharacterized conserved protein (DUF2358)","protein_coding" "Cre02.g105450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g162650","No alias","Chlamydomonas reinhardtii","Amino acid dehydrogenase family protein","protein_coding" "Cre07.g320650","No alias","Chlamydomonas reinhardtii","transferases, transferring hexosyl groups","protein_coding" "Cre08.g359051","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g576050","No alias","Chlamydomonas reinhardtii","zinc transporter 11 precursor","protein_coding" "Cre16.g663315","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g741050","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF502)","protein_coding" "evm.model.contig_2015.3","No alias","Porphyridium purpureum","(at5g58270 : 383.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 223.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 766.0) & (original description: no original description)","protein_coding" "evm.model.contig_2017.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2020.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2020.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2024.20","No alias","Porphyridium purpureum","(at1g75170 : 136.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.contig_2024.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.39","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.5","No alias","Porphyridium purpureum","(at5g10070 : 123.0) RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)","protein_coding" "evm.model.contig_2029.1","No alias","Porphyridium purpureum","(at5g49510 : 92.8) prefoldin 3 (PFD3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin, subunit 3 (InterPro:IPR016655); Has 406 Blast hits to 406 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 133; Plants - 37; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)","protein_coding" "evm.model.contig_2030.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2032.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2034.14","No alias","Porphyridium purpureum",""(at4g24450 : 361.0) ""phosphoglucan, water dikinase"" (PWD); FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 1897 Blast hits to 1851 proteins in 785 species: Archae - 196; Bacteria - 1373; Metazoa - 4; Fungi - 3; Plants - 225; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (q9awa5|gwd1_soltu : 348.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (reliability: 722.0) & (original description: no original description)"","protein_coding" "evm.model.contig_2036.15","No alias","Porphyridium purpureum","(at1g73990 : 400.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 800.0) & (original description: no original description)","protein_coding" "evm.model.contig_2038.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2044.12","No alias","Porphyridium purpureum","(at1g08840 : 403.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 806.0) & (original description: no original description)","protein_coding" "evm.model.contig_2044.34","No alias","Porphyridium purpureum","(at3g10540 : 123.0) 3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink). & (p53681|crk_dauca : 103.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 246.0) & (original description: no original description)","protein_coding" "evm.model.contig_2044.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2048.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2051.26","No alias","Porphyridium purpureum","(at4g19003 : 94.0) VPS25; CONTAINS InterPro DOMAIN/s: ESCRT-II complex, vps25 subunit, N-terminal winged helix (InterPro:IPR014041), ESCRT-II complex, vps25 subunit, C-terminal winged helix (InterPro:IPR014040), ESCRT-II complex, vps25 subunit (InterPro:IPR008570); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description)","protein_coding" "evm.model.contig_2052.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2053.8","No alias","Porphyridium purpureum","(at4g08550 : 124.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)","protein_coding" "evm.model.contig_2055.3","No alias","Porphyridium purpureum","(at2g14520 : 177.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G33700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.contig_2056.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2057.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2058.6","No alias","Porphyridium purpureum",""(at2g42850 : 105.0) member of CYP718; ""cytochrome P450, family 718"" (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (q9axh9|kao1_horvu : 83.2) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 210.0) & (original description: no original description)"","protein_coding" "evm.model.contig_2065.7","No alias","Porphyridium purpureum","(p94026|rbcmt_tobac : 138.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at3g07670 : 137.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.contig_2066.3","No alias","Porphyridium purpureum","(at5g37500 : 118.0) Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 89.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 236.0) & (original description: no original description)","protein_coding" "evm.model.contig_2067.1","No alias","Porphyridium purpureum","(at2g44050 : 97.4) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 97.1) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 194.8) & (original description: no original description)","protein_coding" "evm.model.contig_2067.3","No alias","Porphyridium purpureum","(at4g24840 : 98.2) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)","protein_coding" "evm.model.contig_2069.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2073.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2073.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2082.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2084.15","No alias","Porphyridium purpureum","(at3g14100 : 85.1) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: oligouridylate-binding protein 1A (TAIR:AT1G54080.1); Has 33134 Blast hits to 32894 proteins in 1695 species: Archae - 47; Bacteria - 3311; Metazoa - 12038; Fungi - 6892; Plants - 9686; Viruses - 3; Other Eukaryotes - 1157 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description)","protein_coding" "evm.model.contig_2084.9","No alias","Porphyridium purpureum","(at3g18140 : 115.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)","protein_coding" "evm.model.contig_2089.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2092.7","No alias","Porphyridium purpureum","(at5g07460 : 122.0) ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.; peptidemethionine sulfoxide reductase 2 (PMSR2); CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 3 (TAIR:AT5G07470.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9sec2|msra_lacsa : 114.0) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Lactuca sativa (Garden lettuce) & (reliability: 244.0) & (original description: no original description)","protein_coding" "evm.model.contig_2093.3","No alias","Porphyridium purpureum","(at4g00680 : 84.3) actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)","protein_coding" "evm.model.contig_2094.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2114.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2117.1","No alias","Porphyridium purpureum","(at5g52580 : 160.0) RabGAP/TBC domain-containing protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195), Protein of unknown function DUF3548 (InterPro:IPR021935); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2). & (reliability: 320.0) & (original description: no original description)","protein_coding" "evm.model.contig_2118.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2121.21","No alias","Porphyridium purpureum","(at3g10700 : 107.0) Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.; galacturonic acid kinase (GalAK); FUNCTIONS IN: ATP binding, galactokinase activity, galacturonokinase activity; INVOLVED IN: carbohydrate phosphorylation, D-galacturonate metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 3493 Blast hits to 3446 proteins in 1360 species: Archae - 42; Bacteria - 2414; Metazoa - 241; Fungi - 181; Plants - 121; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2121.24","No alias","Porphyridium purpureum","(at1g34130 : 261.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.contig_2130.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2133.3","No alias","Porphyridium purpureum","(at1g09020 : 90.9) putative activator subunit of SNF1-related protein kinase; homolog of yeast sucrose nonfermenting 4 (SNF4); CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1379 Blast hits to 1368 proteins in 272 species: Archae - 14; Bacteria - 104; Metazoa - 613; Fungi - 295; Plants - 229; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 181.8) & (original description: no original description)","protein_coding" "evm.model.contig_2139.12","No alias","Porphyridium purpureum","(at5g49650 : 298.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 596.0) & (original description: no original description)","protein_coding" "evm.model.contig_2139.21","No alias","Porphyridium purpureum","(at4g08180 : 102.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_2139.23","No alias","Porphyridium purpureum","(at3g47810 : 160.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)","protein_coding" "evm.model.contig_2140.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2165.8","No alias","Porphyridium purpureum","(at5g23290 : 81.6) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)","protein_coding" "evm.model.contig_2181.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2192.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2199.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2246.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2255.6","No alias","Porphyridium purpureum","(at3g18190 : 609.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (p40412|tcpe1_avesa : 275.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1218.0) & (original description: no original description)","protein_coding" "evm.model.contig_2265.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2271.5","No alias","Porphyridium purpureum","(at5g13480 : 436.0) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.; FY; FUNCTIONS IN: protein binding; INVOLVED IN: mRNA processing, regulation of flower development, embryo development ending in seed dormancy; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (p93107|pf20_chlre : 98.2) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 872.0) & (original description: no original description)","protein_coding" "evm.model.contig_2273.8","No alias","Porphyridium purpureum","(at2g33840 : 446.0) Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosine tRNA ligase, archaeal/eukaryotic (InterPro:IPR016485), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT1G28350.1); Has 5443 Blast hits to 5419 proteins in 1791 species: Archae - 389; Bacteria - 3121; Metazoa - 323; Fungi - 286; Plants - 124; Viruses - 5; Other Eukaryotes - 1195 (source: NCBI BLink). & (reliability: 892.0) & (original description: no original description)","protein_coding" "evm.model.contig_2273.9","No alias","Porphyridium purpureum","(at2g47470 : 168.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (p38661|pdia6_medsa : 155.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 336.0) & (original description: no original description)","protein_coding" "evm.model.contig_2276.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2279.4","No alias","Porphyridium purpureum","(at5g16150 : 265.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07423|hex6_ricco : 84.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (reliability: 530.0) & (original description: no original description)","protein_coding" "evm.model.contig_2282.8","No alias","Porphyridium purpureum","(at1g14240 : 109.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80595|apy_soltu : 109.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.contig_2284.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2286.10","No alias","Porphyridium purpureum","(at3g04870 : 597.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ztp4|zds_maize : 591.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Zea mays (Maize) & (reliability: 1194.0) & (original description: no original description)","protein_coding" "evm.model.contig_2291.5","No alias","Porphyridium purpureum","(at1g76050 : 165.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.contig_2292.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2293.12","No alias","Porphyridium purpureum","(at2g47760 : 244.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 488.0) & (original description: no original description)","protein_coding" "evm.model.contig_2293.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2293.7","No alias","Porphyridium purpureum","(at3g49080 : 95.1) Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: ribosomal protein S9 (TAIR:AT1G74970.1); Has 8295 Blast hits to 8282 proteins in 2846 species: Archae - 200; Bacteria - 5387; Metazoa - 167; Fungi - 129; Plants - 162; Viruses - 18; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)","protein_coding" "evm.model.contig_2296.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2299.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2299.7","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2302.4","No alias","Porphyridium purpureum","(at3g20870 : 140.0) ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G08650.2); Has 3662 Blast hits to 3630 proteins in 1201 species: Archae - 124; Bacteria - 2163; Metazoa - 678; Fungi - 116; Plants - 147; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.contig_2306.3","No alias","Porphyridium purpureum","(p46225|tpic_secce : 302.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 281.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "evm.model.contig_2310.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2317.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2343.11","No alias","Porphyridium purpureum","(at4g04180 : 239.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 31547 Blast hits to 29327 proteins in 3060 species: Archae - 1473; Bacteria - 12216; Metazoa - 4656; Fungi - 3754; Plants - 2675; Viruses - 24; Other Eukaryotes - 6749 (source: NCBI BLink). & (p54774|cdc48_soybn : 121.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 478.0) & (original description: no original description)","protein_coding" "evm.model.contig_2345.4","No alias","Porphyridium purpureum","(at5g09810 : 108.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p30165|act2_pea : 108.0) Actin-2 - Pisum sativum (Garden pea) & (reliability: 216.0) & (original description: no original description)","protein_coding" "evm.model.contig_2345.9","No alias","Porphyridium purpureum","(at3g08850 : 227.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 452.0) & (original description: no original description)","protein_coding" "evm.model.contig_2421.9","No alias","Porphyridium purpureum","(at5g39710 : 153.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description)","protein_coding" "evm.model.contig_2430.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2444.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2452.1","No alias","Porphyridium purpureum","(at4g35140 : 85.9) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G38480.1); Has 10094 Blast hits to 7474 proteins in 477 species: Archae - 10; Bacteria - 1944; Metazoa - 3788; Fungi - 2083; Plants - 884; Viruses - 0; Other Eukaryotes - 1385 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)","protein_coding" "evm.model.contig_2468.6","No alias","Porphyridium purpureum","(at1g19580 : 203.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 1 (GAMMA CA1); CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 3 (TAIR:AT5G66510.1). & (reliability: 406.0) & (original description: no original description)","protein_coding" "evm.model.contig_2493.6","No alias","Porphyridium purpureum","(at2g22250 : 89.4) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)","protein_coding" "evm.model.contig_2494.10","No alias","Porphyridium purpureum","(at5g65290 : 105.0) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "evm.model.contig_2501.6","No alias","Porphyridium purpureum","(at4g08690 : 106.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G22180.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "evm.model.contig_2502.5","No alias","Porphyridium purpureum","(at3g19820 : 329.0) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.; DWARF 1 (DWF1); CONTAINS InterPro DOMAIN/s: FAD-linked oxidase, FAD-binding, subdomain 2 (InterPro:IPR016168), FAD-binding, type 2 (InterPro:IPR016166), FAD linked oxidase, N-terminal (InterPro:IPR006094). & (p93472|dim_pea : 307.0) Cell elongation protein diminuto - Pisum sativum (Garden pea) & (gnl|cdd|68872 : 88.9) no description available & (reliability: 658.0) & (original description: no original description)","protein_coding" "evm.model.contig_2506.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2518.4","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2717.1","No alias","Porphyridium purpureum","(q43846|ssy3_soltu : 103.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (at4g18240 : 94.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (reliability: 188.0) & (original description: no original description)","protein_coding" "evm.model.contig_3385.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3392.3","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 138.0) no description available & (p53681|crk_dauca : 111.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (at3g19100 : 110.0) Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT1G49580.1); Has 120241 Blast hits to 118384 proteins in 3609 species: Archae - 140; Bacteria - 14458; Metazoa - 44881; Fungi - 12679; Plants - 26503; Viruses - 512; Other Eukaryotes - 21068 (source: NCBI BLink). & (gnl|cdd|39774 : 84.4) no description available & (reliability: 220.0) & (original description: no original description)","protein_coding" "evm.model.contig_3394.4","No alias","Porphyridium purpureum","(at4g13400 : 140.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G63290.1); Has 390 Blast hits to 389 proteins in 142 species: Archae - 0; Bacteria - 106; Metazoa - 14; Fungi - 122; Plants - 74; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.contig_3396.7","No alias","Porphyridium purpureum","(at2g34660 : 863.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 246.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1726.0) & (original description: no original description)","protein_coding" "evm.model.contig_3397.12","No alias","Porphyridium purpureum","(at4g32730 : 128.0) Encodes a putative c-myb-like transcription factor with three MYB repeats.; PC-MYB1; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p20024|myb1_maize : 104.0) Myb-related protein Zm1 - Zea mays (Maize) & (reliability: 256.0) & (original description: no original description)","protein_coding" "evm.model.contig_3397.20","No alias","Porphyridium purpureum","(at2g19520 : 191.0) Controls flowering.; FVE; FUNCTIONS IN: metal ion binding; INVOLVED IN: flower development, unidimensional cell growth, trichome morphogenesis, leaf morphogenesis; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleosome/chromatin assembly factor group C5 (TAIR:AT4G29730.1); Has 27643 Blast hits to 19007 proteins in 669 species: Archae - 18; Bacteria - 3366; Metazoa - 11144; Fungi - 6221; Plants - 3473; Viruses - 0; Other Eukaryotes - 3421 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)","protein_coding" "evm.model.contig_3399.11","No alias","Porphyridium purpureum","(at1g65650 : 249.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "evm.model.contig_3403.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3405.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3405.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3405.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3409.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3409.10","No alias","Porphyridium purpureum","(q08435|pma1_nicpl : 448.0) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g47950 : 438.0) mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase; H(+)-ATPase 4 (HA4); FUNCTIONS IN: ATPase activity, hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 11 (TAIR:AT5G62670.1); Has 37029 Blast hits to 33095 proteins in 3202 species: Archae - 699; Bacteria - 23601; Metazoa - 3987; Fungi - 2466; Plants - 1918; Viruses - 3; Other Eukaryotes - 4355 (source: NCBI BLink). & (reliability: 876.0) & (original description: no original description)","protein_coding" "evm.model.contig_3409.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3415.2","No alias","Porphyridium purpureum","(at1g72190 : 85.5) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)","protein_coding" "evm.model.contig_3416.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3422.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3425.10","No alias","Porphyridium purpureum","(at4g17020 : 191.0) transcription factor-related; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb2 (InterPro:IPR004598). & (reliability: 382.0) & (original description: no original description)","protein_coding" "evm.model.contig_3425.8","No alias","Porphyridium purpureum","(at4g39460 : 117.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (reliability: 234.0) & (original description: no original description)","protein_coding" "evm.model.contig_3426.16","No alias","Porphyridium purpureum","(at1g54140 : 99.4) putative TATA binding protein associated factor 21kDa; TATA binding protein associated factor 21kDa subunit (TAFII21); FUNCTIONS IN: transcription initiation factor activity, DNA binding; INVOLVED IN: transcription initiation; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TAFII-31 (InterPro:IPR003162), Histone-fold (InterPro:IPR009072); Has 434 Blast hits to 434 proteins in 170 species: Archae - 0; Bacteria - 2; Metazoa - 206; Fungi - 130; Plants - 53; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description)","protein_coding" "evm.model.contig_3435.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3440.13","No alias","Porphyridium purpureum","(at2g39080 : 108.0) NAD(P)-binding Rossmann-fold superfamily protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 818 Blast hits to 811 proteins in 372 species: Archae - 18; Bacteria - 637; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)","protein_coding" "evm.model.contig_3441.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3450.8","No alias","Porphyridium purpureum","(at5g44070 : 176.0) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.; CADMIUM SENSITIVE 1 (CAD1); FUNCTIONS IN: cadmium ion binding, copper ion binding, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 2 (TAIR:AT1G03980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)","protein_coding" "evm.model.contig_3451.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3452.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3458.7","No alias","Porphyridium purpureum","(at1g68100 : 87.0) member of IAA-alanine resistance protein 1; IAA-ALANINE RESISTANT 1 (IAR1); FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); Has 3060 Blast hits to 2483 proteins in 472 species: Archae - 4; Bacteria - 929; Metazoa - 1358; Fungi - 209; Plants - 119; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "evm.model.contig_3467.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3476.4","No alias","Porphyridium purpureum","(at1g13870 : 142.0) Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots.; DEFORMED ROOTS AND LEAVES 1 (DRL1); CONTAINS InterPro DOMAIN/s: Chromatin associated protein KTI12 (InterPro:IPR013641); Has 345 Blast hits to 340 proteins in 174 species: Archae - 7; Bacteria - 2; Metazoa - 117; Fungi - 134; Plants - 50; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.contig_3478.12","No alias","Porphyridium purpureum","(at2g41140 : 114.0) Encodes CDPK-related kinase 1 (CRK1).; CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink). & (p53681|crk_dauca : 111.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 228.0) & (original description: no original description)","protein_coding" "evm.model.contig_3480.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3486.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3490.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3490.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3491.10","No alias","Porphyridium purpureum","(at4g22720 : 450.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 900.0) & (original description: no original description)","protein_coding" "evm.model.contig_3491.3","No alias","Porphyridium purpureum","(at4g38220 : 255.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 502.0) & (original description: no original description)","protein_coding" "evm.model.contig_3491.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3494.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3495.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3509.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3515.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3521.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3537.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3565.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3565.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3565.3","No alias","Porphyridium purpureum","(at1g64650 : 341.0) Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 682.0) & (original description: no original description)","protein_coding" "evm.model.contig_3577.1","No alias","Porphyridium purpureum","(at3g23510 : 290.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)","protein_coding" "evm.model.contig_3577.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3602.2","No alias","Porphyridium purpureum","(at3g62120 : 532.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (reliability: 1064.0) & (original description: no original description)","protein_coding" "evm.model.contig_3606.4","No alias","Porphyridium purpureum","(p80030|fabi_brana : 154.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 152.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "evm.model.contig_3613.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3661.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3698.1","No alias","Porphyridium purpureum","(at4g33110 : 385.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (reliability: 770.0) & (original description: no original description)","protein_coding" "evm.model.contig_3744.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3809.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3837.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_431.4","No alias","Porphyridium purpureum","(at1g18890 : 114.0) encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.; calcium-dependent protein kinase 1 (CDPK1); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, N-terminal protein myristoylation, abscisic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 125370 Blast hits to 119826 proteins in 3847 species: Archae - 176; Bacteria - 14154; Metazoa - 46310; Fungi - 16874; Plants - 24900; Viruses - 438; Other Eukaryotes - 22518 (source: NCBI BLink). & (q75v63|sapk3_orysa : 104.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (reliability: 212.0) & (original description: no original description)","protein_coding" "evm.model.contig_431.5","No alias","Porphyridium purpureum","(at5g64610 : 180.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8li34|myst1_orysa : 180.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (reliability: 360.0) & (original description: no original description)","protein_coding" "evm.model.contig_438.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4402.10","No alias","Porphyridium purpureum","(at1g25380 : 165.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (p29518|bt1_maize : 99.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.contig_4403.16","No alias","Porphyridium purpureum","(at5g56750 : 102.0) N-MYC downregulated-like 1 (NDL1); CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142); BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 3 (TAIR:AT2G19620.1); Has 776 Blast hits to 775 proteins in 111 species: Archae - 2; Bacteria - 48; Metazoa - 563; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 191.0) & (original description: no original description)","protein_coding" "evm.model.contig_4403.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4403.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4404.21","No alias","Porphyridium purpureum","(at1g13120 : 102.0) embryo defective 1745 (emb1745); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GLE1-like (InterPro:IPR012476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05523.1); Has 36705 Blast hits to 24548 proteins in 2114 species: Archae - 242; Bacteria - 8583; Metazoa - 12421; Fungi - 3107; Plants - 1525; Viruses - 221; Other Eukaryotes - 10606 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_4404.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4410.11","No alias","Porphyridium purpureum","(at3g11920 : 132.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "evm.model.contig_4410.4","No alias","Porphyridium purpureum","(at3g03710 : 563.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 1126.0) & (original description: no original description)","protein_coding" "evm.model.contig_4416.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4416.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4418.24","No alias","Porphyridium purpureum","(at1g08940 : 156.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G05170.1); Has 1152 Blast hits to 1140 proteins in 473 species: Archae - 9; Bacteria - 736; Metazoa - 2; Fungi - 189; Plants - 85; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.contig_4419.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_442.5","No alias","Porphyridium purpureum","(at4g24810 : 246.0) similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147); Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G50330.1). & (reliability: 492.0) & (original description: no original description)","protein_coding" "evm.model.contig_4426.2","No alias","Porphyridium purpureum","(at5g01010 : 196.0) EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038). & (reliability: 392.0) & (original description: no original description)","protein_coding" "evm.model.contig_4437.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4438.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4438.13","No alias","Porphyridium purpureum","(at5g59470 : 109.0) Mannose-P-dolichol utilization defect 1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT4G07390.1). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.contig_444.14","No alias","Porphyridium purpureum","(at3g13772 : 464.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 914.0) & (original description: no original description)","protein_coding" "evm.model.contig_4448.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4450.11","No alias","Porphyridium purpureum","(at1g04120 : 712.0) encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.; multidrug resistance-associated protein 5 (MRP5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 3 (TAIR:AT3G13080.1). & (q6yuu5|mdr_orysa : 142.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1424.0) & (original description: no original description)","protein_coding" "evm.model.contig_4455.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4456.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4477.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_448.17","No alias","Porphyridium purpureum","(at3g04480 : 286.0) endoribonucleases; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF71, ATP-binding domain (InterPro:IPR002761), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Endoribonuclease L-PSP (InterPro:IPR006175), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813); Has 2752 Blast hits to 2664 proteins in 980 species: Archae - 283; Bacteria - 1591; Metazoa - 282; Fungi - 177; Plants - 40; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink). & (reliability: 572.0) & (original description: no original description)","protein_coding" "evm.model.contig_4491.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4491.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4491.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4495.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4495.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4501.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4511.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4512.1","No alias","Porphyridium purpureum","(at5g14800 : 188.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (q04708|p5cr_pea : 187.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Pisum sativum (Garden pea) & (reliability: 376.0) & (original description: no original description)","protein_coding" "evm.model.contig_4513.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4516.1","No alias","Porphyridium purpureum","(at1g79990 : 963.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (p93107|pf20_chlre : 92.8) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1926.0) & (original description: no original description)","protein_coding" "evm.model.contig_4516.3","No alias","Porphyridium purpureum","(at5g43940 : 440.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p93436|adhx_orysa : 438.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (reliability: 880.0) & (original description: no original description)","protein_coding" "evm.model.contig_4538.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4550.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_456.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_456.3","No alias","Porphyridium purpureum","(q9zpb7|al7a1_maldo : 453.0) Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3) (Antiquitin-1) (Matured fruit 60 kDa protein) (MF-60) - Malus domestica (Apple) (Malus sylvestris) & (at1g54100 : 442.0) Aldehyde dehydrogenase; aldehyde dehydrogenase 7B4 (ALDH7B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 5F1 (TAIR:AT1G79440.1); Has 58930 Blast hits to 58766 proteins in 3009 species: Archae - 476; Bacteria - 35564; Metazoa - 2491; Fungi - 2115; Plants - 1217; Viruses - 0; Other Eukaryotes - 17067 (source: NCBI BLink). & (reliability: 884.0) & (original description: no original description)","protein_coding" "evm.model.contig_458.7","No alias","Porphyridium purpureum","(at3g05510 : 131.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G78690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)","protein_coding" "evm.model.contig_4604.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_468.8","No alias","Porphyridium purpureum","(at1g79690 : 110.0) nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "evm.model.contig_469.6","No alias","Porphyridium purpureum","(at5g22330 : 584.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 1168.0) & (original description: no original description)","protein_coding" "evm.model.contig_476.3","No alias","Porphyridium purpureum","(at1g73020 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.contig_476.4","No alias","Porphyridium purpureum","(at4g24160 : 125.0) Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels.; alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G64670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)","protein_coding" "evm.model.contig_479.16","No alias","Porphyridium purpureum","(at3g27870 : 338.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description)","protein_coding" "evm.model.contig_479.18","No alias","Porphyridium purpureum","(at1g79230 : 149.0) encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.; mercaptopyruvate sulfurtransferase 1 (MST1); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: rhodanese homologue 2 (TAIR:AT1G16460.2); Has 6251 Blast hits to 6226 proteins in 1459 species: Archae - 162; Bacteria - 3623; Metazoa - 283; Fungi - 152; Plants - 95; Viruses - 0; Other Eukaryotes - 1936 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "evm.model.contig_482.11","No alias","Porphyridium purpureum","(at5g66680 : 223.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 446.0) & (original description: no original description)","protein_coding" "evm.model.contig_482.2","No alias","Porphyridium purpureum","(at3g20780 : 523.0) Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.; topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 1046.0) & (original description: no original description)","protein_coding" "evm.model.contig_489.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_491.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_491.2","No alias","Porphyridium purpureum","(at1g67730 : 152.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)","protein_coding" "evm.model.contig_493.22","No alias","Porphyridium purpureum","(at1g57770 : 320.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (q2vex9|crtso_dauca : 154.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 640.0) & (original description: no original description)","protein_coding" "evm.model.contig_496.21","No alias","Porphyridium purpureum","(at1g78580 : 518.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.; trehalose-6-phosphate synthase (TPS1); CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase (InterPro:IPR012766), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1); Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45; Bacteria - 1772; Metazoa - 831; Fungi - 808; Plants - 384; Viruses - 0; Other Eukaryotes - 2349 (source: NCBI BLink). & (reliability: 1036.0) & (original description: no original description)","protein_coding" "evm.model.contig_498.15","No alias","Porphyridium purpureum","(at5g24030 : 130.0) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.; SLAC1 homologue 3 (SLAH3); FUNCTIONS IN: transporter activity; INVOLVED IN: cellular ion homeostasis; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C4-dicarboxylate transporter/malic acid transport protein (InterPro:IPR004695); BEST Arabidopsis thaliana protein match is: SLAC1 homologue 2 (TAIR:AT4G27970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.contig_499.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_510.19","No alias","Porphyridium purpureum","(at5g19320 : 167.0) Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.; RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "evm.model.contig_522.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_527.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_533.7","No alias","Porphyridium purpureum","(at5g59980 : 93.6) Polymerase/histidinol phosphatase-like; FUNCTIONS IN: tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: trichome; CONTAINS InterPro DOMAIN/s: Polymerase/histidinol phosphatase-like (InterPro:IPR016195), RNase P subunit p30 (InterPro:IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species: Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source: NCBI BLink). & (reliability: 187.2) & (original description: no original description)","protein_coding" "evm.model.contig_538.7","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_550.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_558.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_566.8","No alias","Porphyridium purpureum","(at1g27970 : 130.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 122.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.contig_570.3","No alias","Porphyridium purpureum","(o81220|dcup_maize : 386.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Zea mays (Maize) & (at2g40490 : 379.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 758.0) & (original description: no original description)","protein_coding" "evm.model.contig_585.2","No alias","Porphyridium purpureum","(at4g28706 : 221.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (reliability: 442.0) & (original description: no original description)","protein_coding" "evm.model.contig_589.1","No alias","Porphyridium purpureum","(at5g17630 : 261.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: antiporter activity, glucose transmembrane transporter activity; INVOLVED IN: hexose phosphate transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49131|tpt_flapr : 219.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Flaveria pringlei & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.contig_593.1","No alias","Porphyridium purpureum","(at4g19880 : 338.0) Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description)","protein_coding" "evm.model.contig_600.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_604.7","No alias","Porphyridium purpureum","(at1g02740 : 86.7) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), Tudor-like, plant (InterPro:IPR014002), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT4G37280.1); Has 1083 Blast hits to 947 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 790; Fungi - 163; Plants - 70; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description)","protein_coding" "evm.model.contig_611.10","No alias","Porphyridium purpureum",""(at2g46960 : 109.0) member of CYP709B; ""cytochrome P450, family 709, subfamily B, polypeptide 1"" (CYP709B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 2 (TAIR:AT2G46950.1); Has 32614 Blast hits to 32513 proteins in 1675 species: Archae - 82; Bacteria - 5949; Metazoa - 11217; Fungi - 5903; Plants - 7855; Viruses - 3; Other Eukaryotes - 1605 (source: NCBI BLink). & (q05047|c72a1_catro : 100.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 218.0) & (original description: no original description)"","protein_coding" "evm.model.contig_623.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_623.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_651.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_653.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_661.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_666.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_667.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_681.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_693.7","No alias","Porphyridium purpureum","(at3g58560 : 225.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58580.1); Has 1372 Blast hits to 1328 proteins in 220 species: Archae - 0; Bacteria - 20; Metazoa - 540; Fungi - 247; Plants - 315; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description)","protein_coding" "evm.model.contig_713.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_769.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_849.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000025.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000025.31","No alias","Cyanophora paradoxa","(at2g43070 : 108.0) SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (SPPL3); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (TAIR:AT1G05820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00000037.38","No alias","Cyanophora paradoxa","(at5g44240 : 288.0) aminophospholipid ATPase 2 (ALA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: aminophospholipid ATPase 1 (TAIR:AT5G04930.1). & (reliability: 576.0) & (original description: no original description)","protein_coding" "evm.model.tig00000042.1","No alias","Cyanophora paradoxa","(at1g77740 : 147.0) Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2).; phosphatidylinositol-4-phosphate 5-kinase 2 (PIP5K2); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 1 (TAIR:AT1G21980.1); Has 28568 Blast hits to 7904 proteins in 613 species: Archae - 0; Bacteria - 4095; Metazoa - 4135; Fungi - 445; Plants - 2701; Viruses - 0; Other Eukaryotes - 17192 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 115.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 294.0) & (original description: no original description)","protein_coding" "evm.model.tig00000042.226","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.64","No alias","Cyanophora paradoxa","(at5g07910 : 82.4) Leucine-rich repeat (LRR) family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30105.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)","protein_coding" "evm.model.tig00000042.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000057.120","No alias","Cyanophora paradoxa","(at5g18230 : 194.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "evm.model.tig00000057.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000073.51","No alias","Cyanophora paradoxa","(at3g02850 : 164.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 125.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.tig00000076.101","No alias","Cyanophora paradoxa","(at3g60240 : 206.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (q03387|if41_wheat : 184.0) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (reliability: 412.0) & (original description: no original description)","protein_coding" "evm.model.tig00000076.82","No alias","Cyanophora paradoxa","(at3g53090 : 286.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 7 (UPL7); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin protein ligase 6 (TAIR:AT3G17205.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) & (original description: no original description)","protein_coding" "evm.model.tig00000079.7","No alias","Cyanophora paradoxa","(at5g03730 : 90.1) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (reliability: 180.2) & (original description: no original description)","protein_coding" "evm.model.tig00000093.109","No alias","Cyanophora paradoxa","(at1g74910 : 242.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 484.0) & (original description: no original description)","protein_coding" "evm.model.tig00000093.119","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.146","No alias","Cyanophora paradoxa","(at2g21410 : 455.0) Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.; vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 910.0) & (original description: no original description)","protein_coding" "evm.model.tig00000093.166","No alias","Cyanophora paradoxa","(at5g35750 : 85.5) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)","protein_coding" "evm.model.tig00000093.174","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000114.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000133.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000140.18","No alias","Cyanophora paradoxa","(at1g14570 : 121.0) UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAS (InterPro:IPR006577), Uncharacterised conserved protein UCP037991, UAS, UBX (InterPro:IPR017346), UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 596 Blast hits to 582 proteins in 180 species: Archae - 0; Bacteria - 6; Metazoa - 214; Fungi - 136; Plants - 152; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "evm.model.tig00000144.95","No alias","Cyanophora paradoxa","(at1g34130 : 910.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1820.0) & (original description: no original description)","protein_coding" "evm.model.tig00000147.58","No alias","Cyanophora paradoxa","(at1g13770 : 156.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)","protein_coding" "evm.model.tig00000157.126","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.85","No alias","Cyanophora paradoxa","(at4g35987 : 132.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G27400.1); Has 1596 Blast hits to 1596 proteins in 294 species: Archae - 0; Bacteria - 195; Metazoa - 556; Fungi - 317; Plants - 331; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "evm.model.tig00000157.90","No alias","Cyanophora paradoxa","(at2g04750 : 148.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 4258 Blast hits to 2703 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 3436; Fungi - 331; Plants - 148; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)","protein_coding" "evm.model.tig00000157.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000157.93","No alias","Cyanophora paradoxa","(at2g47760 : 89.7) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description)","protein_coding" "evm.model.tig00000157.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.14","No alias","Cyanophora paradoxa","(at1g67820 : 123.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)","protein_coding" "evm.model.tig00000158.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000178.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000178.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000178.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000194.57","No alias","Cyanophora paradoxa","(at4g25450 : 83.2) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)","protein_coding" "evm.model.tig00000202.10","No alias","Cyanophora paradoxa","(at3g56040 : 177.0) UDP-glucose pyrophosphorylase 3 (UGP3); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); Has 215 Blast hits to 211 proteins in 91 species: Archae - 0; Bacteria - 18; Metazoa - 12; Fungi - 60; Plants - 85; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.tig00000204.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000215.107","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000215.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000215.121","No alias","Cyanophora paradoxa","(at4g38130 : 506.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 487.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1012.0) & (original description: no original description)","protein_coding" "evm.model.tig00000219.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000219.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000219.26","No alias","Cyanophora paradoxa","(at4g15570 : 182.0) Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.; MAGATAMA 3 (MAA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen-pistil interaction, pollen tube guidance, embryo sac development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G16800.1); Has 6636 Blast hits to 6003 proteins in 1303 species: Archae - 237; Bacteria - 1922; Metazoa - 1300; Fungi - 1113; Plants - 639; Viruses - 442; Other Eukaryotes - 983 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.tig00000219.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000237.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000237.4","No alias","Cyanophora paradoxa","(at2g40840 : 185.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)","protein_coding" "evm.model.tig00000237.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000241.131","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000241.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000241.173","No alias","Cyanophora paradoxa","(at2g17570 : 180.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)","protein_coding" "evm.model.tig00000241.180","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000241.93","No alias","Cyanophora paradoxa","(q9xhl5|hmdh3_orysa : 462.0) 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 (EC 1.1.1.34) (HMG-CoA reductase 3) - Oryza sativa (Rice) & (at1g76490 : 447.0) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine; hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink). & (reliability: 894.0) & (original description: no original description)","protein_coding" "evm.model.tig00000248.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.82","No alias","Cyanophora paradoxa","(at1g63120 : 87.0) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.; RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "evm.model.tig00000269.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000269.84","No alias","Cyanophora paradoxa","(at4g32630 : 124.0) ArfGap/RecO-like zinc finger domain-containing protein; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "evm.model.tig00000282.8","No alias","Cyanophora paradoxa","(at1g50670 : 171.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)","protein_coding" "evm.model.tig00000310.42","No alias","Cyanophora paradoxa","(at4g32140 : 102.0) EamA-like transporter family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: EamA-like transporter family (TAIR:AT3G07080.1); Has 1581 Blast hits to 1581 proteins in 473 species: Archae - 40; Bacteria - 583; Metazoa - 277; Fungi - 235; Plants - 87; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00000310.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000310.77","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000319.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000334.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000350.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000361.5","No alias","Cyanophora paradoxa","(p94026|rbcmt_tobac : 131.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 120.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)","protein_coding" "evm.model.tig00000367.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000369.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000383.85","No alias","Cyanophora paradoxa","(at4g10750 : 109.0) Phosphoenolpyruvate carboxylase family protein; FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: aldolase like (TAIR:AT4G24080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.tig00000383.93","No alias","Cyanophora paradoxa","(at3g22750 : 129.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G14780.1); Has 129296 Blast hits to 127897 proteins in 4981 species: Archae - 144; Bacteria - 14276; Metazoa - 48853; Fungi - 11933; Plants - 33374; Viruses - 537; Other Eukaryotes - 20179 (source: NCBI BLink). & (q8l4h4|nork_medtr : 100.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 258.0) & (original description: no original description)","protein_coding" "evm.model.tig00000385.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000402.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000402.9","No alias","Cyanophora paradoxa","(at3g08970 : 89.7) J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.; ATERDJ3A; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Thioredoxin-like fold (InterPro:IPR012336), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G22360.1); Has 29746 Blast hits to 27935 proteins in 3434 species: Archae - 203; Bacteria - 10482; Metazoa - 6798; Fungi - 2759; Plants - 3202; Viruses - 20; Other Eukaryotes - 6282 (source: NCBI BLink). & (reliability: 179.4) & (original description: no original description)","protein_coding" "evm.model.tig00000403.87","No alias","Cyanophora paradoxa","(at1g28140 : 98.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 197.2) & (original description: no original description)","protein_coding" "evm.model.tig00000404.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000411.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000430.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000430.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000444.17","No alias","Cyanophora paradoxa","(at1g79050 : 281.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "evm.model.tig00000451.18","No alias","Cyanophora paradoxa","(at1g48790 : 128.0) associated molecule with the SH3 domain of STAM 1 (AMSH1); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1172 Blast hits to 1019 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 476; Fungi - 293; Plants - 278; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)","protein_coding" "evm.model.tig00000455.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000459.16","No alias","Cyanophora paradoxa","(at1g73660 : 136.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 80.1) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00000459.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000478.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000478.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000489.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000498.6","No alias","Cyanophora paradoxa","(at1g65820 : 116.0) microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)","protein_coding" "evm.model.tig00000498.67","No alias","Cyanophora paradoxa","(at4g26270 : 404.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 808.0) & (original description: no original description)","protein_coding" "evm.model.tig00000498.75","No alias","Cyanophora paradoxa","(at2g01900 : 105.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "evm.model.tig00000498.80","No alias","Cyanophora paradoxa","(q9zsv1|parp1_maize : 162.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Zea mays (Maize) & (at2g31320 : 158.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 316.0) & (original description: no original description)","protein_coding" "evm.model.tig00000498.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000545.31","No alias","Cyanophora paradoxa","(at1g54130 : 190.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (reliability: 380.0) & (original description: no original description)","protein_coding" "evm.model.tig00000551.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000571.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000601.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000615.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000615.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000624.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000630.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000632.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000655.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000663.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000692.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000692.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000704.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000718.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000737.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000741.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000741.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000754.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000754.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000754.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000760.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000792.11","No alias","Cyanophora paradoxa","(at5g19740 : 309.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description)","protein_coding" "evm.model.tig00000792.19","No alias","Cyanophora paradoxa","(at5g48570 : 102.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 100.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00000792.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000796.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000796.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000802.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000806.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000821.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000828.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000829.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000842.19","No alias","Cyanophora paradoxa","(at1g50240 : 182.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.tig00000842.20","No alias","Cyanophora paradoxa","(at1g50240 : 377.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 130.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: no original description)","protein_coding" "evm.model.tig00000849.37","No alias","Cyanophora paradoxa","(at2g14835 : 116.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)","protein_coding" "evm.model.tig00000852.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000852.42","No alias","Cyanophora paradoxa","(at1g08840 : 150.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 300.0) & (original description: no original description)","protein_coding" "evm.model.tig00000863.40","No alias","Cyanophora paradoxa","(at2g20190 : 85.1) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)","protein_coding" "evm.model.tig00000865.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000870.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000870.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000870.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000880.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000881.5","No alias","Cyanophora paradoxa","(at3g53710 : 97.1) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 6 (AGD6); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 7 (TAIR:AT2G37550.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description)","protein_coding" "evm.model.tig00000882.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000889.15","No alias","Cyanophora paradoxa","(at1g70770 : 117.0) Protein of unknown function DUF2359, transmembrane; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2359, transmembrane (InterPro:IPR019308); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2). & (reliability: 234.0) & (original description: no original description)","protein_coding" "evm.model.tig00000903.41","No alias","Cyanophora paradoxa","(at2g32730 : 545.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 1090.0) & (original description: no original description)","protein_coding" "evm.model.tig00000903.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000923.12","No alias","Cyanophora paradoxa","(at4g36760 : 492.0) Arabidopsis aminopeptidase P1; aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink). & (reliability: 984.0) & (original description: no original description)","protein_coding" "evm.model.tig00000944.11","No alias","Cyanophora paradoxa","(at5g53770 : 94.7) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleic acid binding, nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT4G00060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description)","protein_coding" "evm.model.tig00000944.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000955.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000955.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000970.23","No alias","Cyanophora paradoxa","(at2g47760 : 220.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) & (original description: no original description)","protein_coding" "evm.model.tig00000970.24","No alias","Cyanophora paradoxa","(at2g47760 : 85.1) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)","protein_coding" "evm.model.tig00000981.23","No alias","Cyanophora paradoxa","(at5g60160 : 512.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q45055|apea_borbu : 114.0) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 1024.0) & (original description: no original description)","protein_coding" "evm.model.tig00000983.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000989.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001000.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001017.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001024.5","No alias","Cyanophora paradoxa","(at3g55200 : 962.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 1924.0) & (original description: no original description)","protein_coding" "evm.model.tig00001029.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001029.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001030.19","No alias","Cyanophora paradoxa","(at3g04240 : 99.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)","protein_coding" "evm.model.tig00001038.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001038.26","No alias","Cyanophora paradoxa","(at4g18230 : 149.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "evm.model.tig00001038.27","No alias","Cyanophora paradoxa","(at3g13290 : 87.8) varicose-related (VCR); FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G13300.1); Has 1082 Blast hits to 861 proteins in 259 species: Archae - 6; Bacteria - 246; Metazoa - 313; Fungi - 205; Plants - 136; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.tig00001041.24","No alias","Cyanophora paradoxa","(at3g17880 : 94.0) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (p80028|trxh_chlre : 88.6) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (reliability: 188.0) & (original description: no original description)","protein_coding" "evm.model.tig00001042.14","No alias","Cyanophora paradoxa","(at1g05910 : 332.0) cell division cycle protein 48-related / CDC48-related; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1); Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526; Bacteria - 25275; Metazoa - 14857; Fungi - 7046; Plants - 4267; Viruses - 557; Other Eukaryotes - 14126 (source: NCBI BLink). & (p54774|cdc48_soybn : 130.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 664.0) & (original description: no original description)","protein_coding" "evm.model.tig00001042.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001056.17","No alias","Cyanophora paradoxa","(at2g32040 : 203.0) The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.; Major facilitator superfamily protein; FUNCTIONS IN: folic acid transporter activity, 5-formyltetrahydrofolate transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 2017 Blast hits to 1915 proteins in 421 species: Archae - 4; Bacteria - 671; Metazoa - 3; Fungi - 33; Plants - 272; Viruses - 0; Other Eukaryotes - 1034 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)","protein_coding" "evm.model.tig00001067.32","No alias","Cyanophora paradoxa","(at1g61850 : 87.0) Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.; phospholipases;galactolipases; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1). & (reliability: 174.0) & (original description: no original description)","protein_coding" "evm.model.tig00001086.7","No alias","Cyanophora paradoxa","(at4g00660 : 672.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 276.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1344.0) & (original description: no original description)","protein_coding" "evm.model.tig00001095.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001098.14","No alias","Cyanophora paradoxa","(at2g38770 : 365.0) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 730.0) & (original description: no original description)","protein_coding" "evm.model.tig00001098.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001128.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001155.23","No alias","Cyanophora paradoxa","(at3g51830 : 219.0) putative transmembrane protein G5p (AtG5) mRNA, complete; SAC domain-containing protein 8 (SAC8); FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G66020.1). & (reliability: 432.0) & (original description: no original description)","protein_coding" "evm.model.tig00001155.28","No alias","Cyanophora paradoxa","(at3g01320 : 124.0) Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 1 (SNL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 2 (TAIR:AT5G15020.2). & (reliability: 248.0) & (original description: no original description)","protein_coding" "evm.model.tig00001164.12","No alias","Cyanophora paradoxa","(at3g43210 : 85.9) Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.; TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)","protein_coding" "evm.model.tig00001164.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001181.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001187.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001208.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001234.17","No alias","Cyanophora paradoxa","(at2g31865 : 171.0) poly(ADP-ribose) glycohydrolase 2 (PARG2); FUNCTIONS IN: poly(ADP-ribose) glycohydrolase activity; INVOLVED IN: defense response to fungus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: Poly (ADP-ribose) glycohydrolase (PARG) (TAIR:AT2G31870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)","protein_coding" "evm.model.tig00001249.8","No alias","Cyanophora paradoxa","(at5g53080 : 80.9) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 161.8) & (original description: no original description)","protein_coding" "evm.model.tig00001264.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001264.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001265.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001278.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001284.4","No alias","Cyanophora paradoxa","(at5g22130 : 93.2) member of Glycosyltransferase Family- 50; PEANUT 1 (PNT1); FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups, alpha-1,4-mannosyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process, cellulose biosynthetic process, plant-type cell wall biogenesis, embryo development, cell division; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, DXD (InterPro:IPR007704). & (q500w7|pigm_arath : 93.2) GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) (Protein PEANUT1) - Arabidopsis thaliana (Mouse-ear cress) & (reliability: 186.4) & (original description: no original description)","protein_coding" "evm.model.tig00001284.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001331.11","No alias","Cyanophora paradoxa","(at4g26270 : 364.0) phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 728.0) & (original description: no original description)","protein_coding" "evm.model.tig00001331.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001339.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001365.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001365.9","No alias","Cyanophora paradoxa","(at1g73020 : 99.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 198.8) & (original description: no original description)","protein_coding" "evm.model.tig00001366.16","No alias","Cyanophora paradoxa","(at3g26060 : 85.5) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (reliability: 171.0) & (original description: no original description)","protein_coding" "evm.model.tig00001371.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001374.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001376.12","No alias","Cyanophora paradoxa","(at1g63680 : 142.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.tig00001376.3","No alias","Cyanophora paradoxa","(p38482|atpbm_chlre : 291.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Chlamydomonas reinhardtii & (at5g08680 : 284.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 568.0) & (original description: no original description)","protein_coding" "evm.model.tig00001408.15","No alias","Cyanophora paradoxa","(at3g23660 : 315.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2). & (reliability: 630.0) & (original description: no original description)","protein_coding" "evm.model.tig00001416.5","No alias","Cyanophora paradoxa","(at2g17520 : 197.0) Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.; IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink). & (q02723|rkin1_secce : 80.5) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 394.0) & (original description: no original description)","protein_coding" "evm.model.tig00001443.2","No alias","Cyanophora paradoxa","(at5g06140 : 140.0) Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 280.0) & (original description: no original description)","protein_coding" "evm.model.tig00001486.8","No alias","Cyanophora paradoxa","(at1g65440 : 311.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (reliability: 622.0) & (original description: no original description)","protein_coding" "evm.model.tig00001487.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001490.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001493.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001501.4","No alias","Cyanophora paradoxa","(at1g04510 : 111.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.tig00001525.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001590.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001623.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001657.5","No alias","Cyanophora paradoxa","(at1g57600 : 209.0) MBOAT (membrane bound O-acyl transferase) family protein; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); Has 2343 Blast hits to 2336 proteins in 775 species: Archae - 0; Bacteria - 1642; Metazoa - 209; Fungi - 146; Plants - 49; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description)","protein_coding" "evm.model.tig00020510.131","No alias","Cyanophora paradoxa","(p93528|phyc_sorbi : 202.0) Phytochrome C - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (at5g35840 : 198.0) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description)","protein_coding" "evm.model.tig00020510.153","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020510.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020510.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.52","No alias","Cyanophora paradoxa","(at3g55100 : 165.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: white-brown complex homolog 19 (TAIR:AT3G55130.1); Has 392721 Blast hits to 356813 proteins in 4114 species: Archae - 7219; Bacteria - 309703; Metazoa - 8988; Fungi - 6487; Plants - 5627; Viruses - 12; Other Eukaryotes - 54685 (source: NCBI BLink). & (q8gu90|pdr3_orysa : 125.0) Pleiotropic drug resistance protein 3 - Oryza sativa (Rice) & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.tig00020537.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020538.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020542.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020552.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.135","No alias","Cyanophora paradoxa","(at1g25290 : 89.0) RHOMBOID-like protein 10 (RBL10); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 5 (TAIR:AT1G52580.1). & (reliability: 178.0) & (original description: no original description)","protein_coding" "evm.model.tig00020553.171","No alias","Cyanophora paradoxa","(p53535|phsl2_soltu : 271.0) Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-2) - Solanum tuberosum (Potato) & (at3g46970 : 259.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description)","protein_coding" "evm.model.tig00020553.178","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.291","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.134","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.138","No alias","Cyanophora paradoxa","(at1g07705 : 132.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "evm.model.tig00020554.44","No alias","Cyanophora paradoxa","(o24361|psb5_spiol : 306.0) Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) - Spinacia oleracea (Spinach) & (at3g26340 : 298.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: proteolysis involved in cellular protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit E1 (TAIR:AT1G13060.1); Has 6541 Blast hits to 6534 proteins in 612 species: Archae - 835; Bacteria - 512; Metazoa - 2083; Fungi - 1372; Plants - 865; Viruses - 0; Other Eukaryotes - 874 (source: NCBI BLink). & (reliability: 596.0) & (original description: no original description)","protein_coding" "evm.model.tig00020554.99","No alias","Cyanophora paradoxa","(at3g07950 : 169.0) rhomboid protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1751, integral membrane, eukaryotic (InterPro:IPR013861); Has 573 Blast hits to 573 proteins in 252 species: Archae - 14; Bacteria - 156; Metazoa - 119; Fungi - 151; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)","protein_coding" "evm.model.tig00020556.14","No alias","Cyanophora paradoxa","(at2g41790 : 249.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "evm.model.tig00020556.36","No alias","Cyanophora paradoxa","(at5g14570 : 126.0) Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.; high affinity nitrate transporter 2.7 (NRT2.7); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter2.5 (TAIR:AT1G12940.1); Has 7777 Blast hits to 7739 proteins in 1625 species: Archae - 132; Bacteria - 6743; Metazoa - 43; Fungi - 326; Plants - 261; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description)","protein_coding" "evm.model.tig00020556.39","No alias","Cyanophora paradoxa","(at5g64240 : 92.8) metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)","protein_coding" "evm.model.tig00020556.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.81","No alias","Cyanophora paradoxa","(at1g14000 : 80.5) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)","protein_coding" "evm.model.tig00020556.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020557.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020557.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020557.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020560.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.187","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.81","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020572.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.56","No alias","Cyanophora paradoxa","(at2g26590 : 92.4) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description)","protein_coding" "evm.model.tig00020592.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020603.89","No alias","Cyanophora paradoxa","(at2g26710 : 201.0) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.; PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); FUNCTIONS IN: steroid hydroxylase activity, oxygen binding; INVOLVED IN: response to light stimulus, response to brassinosteroid stimulus, brassinosteroid homeostasis, brassinosteroid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 8 (TAIR:AT3G14620.1); Has 34717 Blast hits to 34565 proteins in 1738 species: Archae - 71; Bacteria - 6148; Metazoa - 11470; Fungi - 6879; Plants - 8435; Viruses - 3; Other Eukaryotes - 1711 (source: NCBI BLink). & (o48921|c97b2_soybn : 176.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 390.0) & (original description: no original description)","protein_coding" "evm.model.tig00020603.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020603.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.130","No alias","Cyanophora paradoxa","(at1g43190 : 385.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (reliability: 770.0) & (original description: no original description)","protein_coding" "evm.model.tig00020610.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020614.110","No alias","Cyanophora paradoxa","(p12113|atpg_chlre : 117.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Chlamydomonas reinhardtii & (at4g04640 : 112.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)","protein_coding" "evm.model.tig00020614.111","No alias","Cyanophora paradoxa","(at1g03445 : 265.0) encodes a serine/threonine protein phosphatase with an N-terminal Kelch-repeat domain, which is nuclear localized and expressed preferentially in elongating cells. Genetic evidence suggest that this gene plays a redundant role (along with other members of the same gene family) in modulating growth in response to brassinosteroid.; BRI1 SUPPRESSOR 1 (BSU1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of protein localization; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 1 (TAIR:AT4G03080.1); Has 12351 Blast hits to 9811 proteins in 679 species: Archae - 82; Bacteria - 604; Metazoa - 4121; Fungi - 2161; Plants - 2580; Viruses - 7; Other Eukaryotes - 2796 (source: NCBI BLink). & (q2qm47|bsl2_orysa : 258.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 530.0) & (original description: no original description)","protein_coding" "evm.model.tig00020614.37","No alias","Cyanophora paradoxa","(at3g08960 : 136.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G26170.1); Has 1304 Blast hits to 1268 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 515; Fungi - 472; Plants - 189; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00020629.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020660.60","No alias","Cyanophora paradoxa","(at1g73020 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 173.4) & (original description: no original description)","protein_coding" "evm.model.tig00020675.112","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020675.2","No alias","Cyanophora paradoxa","(at3g17000 : 188.0) ubiquitin-conjugating enzyme 32 (UBC32); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0; Bacteria - 0; Metazoa - 3544; Fungi - 1602; Plants - 1492; Viruses - 20; Other Eukaryotes - 1258 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description)","protein_coding" "evm.model.tig00020675.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020675.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.55","No alias","Cyanophora paradoxa","(at5g20270 : 123.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)","protein_coding" "evm.model.tig00020685.10","No alias","Cyanophora paradoxa",""(o48921|c97b2_soybn : 110.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (at4g15110 : 109.0) member of CYP97B; ""cytochrome P450, family 97, subfamily B, polypeptide 3"" (CYP97B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31568 Blast hits to 31460 proteins in 1570 species: Archae - 46; Bacteria - 3266; Metazoa - 11509; Fungi - 6986; Plants - 8573; Viruses - 6; Other Eukaryotes - 1182 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)"","protein_coding" "evm.model.tig00020688.2","No alias","Cyanophora paradoxa","(at2g01740 : 104.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.tig00020693.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.40","No alias","Cyanophora paradoxa","(at2g35830 : 99.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35810.1). & (reliability: 198.0) & (original description: no original description)","protein_coding" "evm.model.tig00020704.6","No alias","Cyanophora paradoxa","(at5g10720 : 105.0) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 95.9) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 210.0) & (original description: no original description)","protein_coding" "evm.model.tig00020710.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020710.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020723.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020723.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020734.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020734.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020800.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020806.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020807.6","No alias","Cyanophora paradoxa","(at5g27600 : 229.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "evm.model.tig00020816.27","No alias","Cyanophora paradoxa","(at1g55350 : 197.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 394.0) & (original description: no original description)","protein_coding" "evm.model.tig00020830.122","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020830.4","No alias","Cyanophora paradoxa","(at1g15500 : 136.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 132.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00020830.5","No alias","Cyanophora paradoxa","(at1g15500 : 101.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 94.7) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 202.0) & (original description: no original description)","protein_coding" "evm.model.tig00020830.86","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020830.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020848.21","No alias","Cyanophora paradoxa","(at1g79650 : 108.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (reliability: 216.0) & (original description: no original description)","protein_coding" "evm.model.tig00020849.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020875.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020875.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020878.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020892.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020902.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.108","No alias","Cyanophora paradoxa","(at5g25150 : 118.0) Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).; TBP-associated factor 5 (TAF5); FUNCTIONS IN: transcription regulator activity, nucleotide binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), TFIID subunit, WD40-associated region (InterPro:IPR007582); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 114463 Blast hits to 42274 proteins in 991 species: Archae - 68; Bacteria - 11258; Metazoa - 46869; Fungi - 25620; Plants - 15010; Viruses - 3; Other Eukaryotes - 15635 (source: NCBI BLink). & (p93107|pf20_chlre : 115.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.tig00020904.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.69","No alias","Cyanophora paradoxa","(at1g06220 : 825.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 388.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1650.0) & (original description: no original description)","protein_coding" "evm.model.tig00020912.85","No alias","Cyanophora paradoxa","(q71vm4|ima1a_orysa : 140.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at4g16143 : 138.0) Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 2 (IMPA-2); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4654 Blast hits to 3364 proteins in 293 species: Archae - 4; Bacteria - 33; Metazoa - 1869; Fungi - 640; Plants - 1336; Viruses - 0; Other Eukaryotes - 772 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)","protein_coding" "evm.model.tig00020927.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020930.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020934.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020938.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020938.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020944.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020944.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020951.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020960.57","No alias","Cyanophora paradoxa","(at5g20990 : 241.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "evm.model.tig00020960.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020960.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020965.11","No alias","Cyanophora paradoxa","(at3g51040 : 107.0) Encodes a protein of 231 amino acids with 51% identity to RTE1 over 209 amino acids.; RTE1-homolog (RTH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF778) (TAIR:AT2G26070.1); Has 294 Blast hits to 294 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.tig00020965.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020965.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021012.17","No alias","Cyanophora paradoxa","(at4g39460 : 149.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (p29518|bt1_maize : 99.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 298.0) & (original description: no original description)","protein_coding" "evm.model.tig00021014.8","No alias","Cyanophora paradoxa","(at5g36880 : 275.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 550.0) & (original description: no original description)","protein_coding" "evm.model.tig00021015.19","No alias","Cyanophora paradoxa","(at5g35750 : 145.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 121.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 290.0) & (original description: no original description)","protein_coding" "evm.model.tig00021036.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021037.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021038.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021038.47","No alias","Cyanophora paradoxa","(at5g52810 : 100.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "evm.model.tig00021038.99","No alias","Cyanophora paradoxa","(at3g08505 : 137.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "evm.model.tig00021043.12","No alias","Cyanophora paradoxa","(at1g16900 : 84.7) curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein; Alg9-like mannosyltransferase family; FUNCTIONS IN: sugar binding, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT5G14850.2); Has 817 Blast hits to 803 proteins in 193 species: Archae - 0; Bacteria - 22; Metazoa - 302; Fungi - 301; Plants - 91; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)","protein_coding" "evm.model.tig00021070.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.98","No alias","Cyanophora paradoxa","(at2g41790 : 414.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 828.0) & (original description: no original description)","protein_coding" "evm.model.tig00021072.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021072.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.53","No alias","Cyanophora paradoxa","(at5g43340 : 143.0) Encodes Pht1;6, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;6 (PHT1;6); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)","protein_coding" "evm.model.tig00021094.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021094.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021098.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021105.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021108.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021108.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021108.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021123.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021127.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021127.34","No alias","Cyanophora paradoxa","(at3g49660 : 94.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description)","protein_coding" "evm.model.tig00021127.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021135.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021135.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021135.36","No alias","Cyanophora paradoxa","(at3g23810 : 517.0) S-adenosyl-l-homocysteine (SAH) hydrolase 2 (SAHH2); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: one-carbon metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-homocysteine hydrolase (TAIR:AT4G13940.1); Has 7939 Blast hits to 7933 proteins in 1466 species: Archae - 229; Bacteria - 2315; Metazoa - 640; Fungi - 145; Plants - 247; Viruses - 0; Other Eukaryotes - 4363 (source: NCBI BLink). & (q01781|sahh_petcr : 510.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1034.0) & (original description: no original description)","protein_coding" "evm.model.tig00021168.12","No alias","Cyanophora paradoxa","(at5g56280 : 89.4) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.; COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)","protein_coding" "evm.model.tig00021179.53","No alias","Cyanophora paradoxa","(at5g35750 : 130.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 119.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.tig00021179.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021234.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021234.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021257.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021276.11","No alias","Cyanophora paradoxa","(at1g73990 : 144.0) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)","protein_coding" "evm.model.tig00021276.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021290.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021318.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021319.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021319.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021319.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021326.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021339.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.103","No alias","Cyanophora paradoxa","(at2g01830 : 125.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 99.8) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 250.0) & (original description: no original description)","protein_coding" "evm.model.tig00021348.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021348.79","No alias","Cyanophora paradoxa","(at2g31650 : 109.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.; homologue of trithorax (ATX1); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, C-terminal (InterPro:IPR003889), Post-SET domain (InterPro:IPR003616), FY-rich, N-terminal (InterPro:IPR003888), Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Lamin-B receptor of TUDOR domain (InterPro:IPR019023), FY-rich, C-terminal subgroup (InterPro:IPR018516), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: trithorax-like protein 2 (TAIR:AT1G05830.2); Has 7192 Blast hits to 6948 proteins in 474 species: Archae - 2; Bacteria - 393; Metazoa - 3480; Fungi - 840; Plants - 1251; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)","protein_coding" "evm.model.tig00021350.7","No alias","Cyanophora paradoxa","(at5g26740 : 102.0) Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00021350.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021352.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021352.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021357.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021357.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021357.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021357.7","No alias","Cyanophora paradoxa","(at3g49400 : 82.4) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 164.8) & (original description: no original description)","protein_coding" "evm.model.tig00021432.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021433.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021434.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021434.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021435.14","No alias","Cyanophora paradoxa","(at2g26990 : 299.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)","protein_coding" "evm.model.tig00021435.26","No alias","Cyanophora paradoxa","(at1g55350 : 197.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 394.0) & (original description: no original description)","protein_coding" "evm.model.tig00021435.48","No alias","Cyanophora paradoxa","(at2g14255 : 221.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description)","protein_coding" "evm.model.tig00021464.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021468.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021493.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021493.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021493.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021501.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021501.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021518.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021522.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021522.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021525.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021531.14","No alias","Cyanophora paradoxa","(at3g27380 : 319.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)","protein_coding" "evm.model.tig00021532.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021532.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021537.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021569.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021582.8","No alias","Cyanophora paradoxa","(at1g59820 : 352.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q65x71|aca6_orysa : 90.1) Probable calcium-transporting ATPase 6, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 6) - Oryza sativa (Rice) & (reliability: 650.0) & (original description: no original description)","protein_coding" "evm.model.tig00021589.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.16","No alias","Cyanophora paradoxa","(at1g67890 : 103.0) PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, catalytic domain (InterPro:IPR000719), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 127928 Blast hits to 126175 proteins in 4896 species: Archae - 310; Bacteria - 16027; Metazoa - 47209; Fungi - 11347; Plants - 33277; Viruses - 520; Other Eukaryotes - 19238 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)","protein_coding" "evm.model.tig00021612.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021719.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021721.27","No alias","Cyanophora paradoxa","(q71vm4|ima1a_orysa : 650.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at3g06720 : 641.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 1282.0) & (original description: no original description)","protein_coding" "Glyma.01G046100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G154200","No alias","Glycine max","SWIB/MDM2 domain superfamily protein","protein_coding" "Glyma.01G175700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.01G186000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G012100","No alias","Glycine max","SET domain-containing protein","protein_coding" "Glyma.02G048100","No alias","Glycine max","TSL-kinase interacting protein 1","protein_coding" "Glyma.02G048900","No alias","Glycine max","zinc finger (Ran-binding) family protein","protein_coding" "Glyma.02G078500","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.02G098600","No alias","Glycine max","Endosomal targeting BRO1-like domain-containing protein","protein_coding" "Glyma.02G108400","No alias","Glycine max","Glucose-methanol-choline (GMC) oxidoreductase family protein","protein_coding" "Glyma.02G125900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G142800","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.02G158100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G230800","No alias","Glycine max","CCT motif family protein","protein_coding" "Glyma.02G304400","No alias","Glycine max","Plant protein of unknown function (DUF641)","protein_coding" "Glyma.03G002500","No alias","Glycine max","3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2","protein_coding" "Glyma.03G017800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G035900","No alias","Glycine max","MAC/Perforin domain-containing protein","protein_coding" "Glyma.03G094300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.03G196100","No alias","Glycine max","SOUL heme-binding family protein","protein_coding" "Glyma.03G213200","No alias","Glycine max","asparagine-linked glycosylation 3","protein_coding" "Glyma.03G240700","No alias","Glycine max","Protein of unknown function (DUF1068)","protein_coding" "Glyma.04G024100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G038000","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding" "Glyma.04G038600","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding" "Glyma.04G080400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G136700","No alias","Glycine max","Lateral root primordium (LRP) protein-related","protein_coding" "Glyma.04G141900","No alias","Glycine max","elongation defective 1 protein / ELD1 protein","protein_coding" "Glyma.04G148100","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding" "Glyma.05G012700","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "Glyma.05G020500","No alias","Glycine max","PLC-like phosphodiesterases superfamily protein","protein_coding" "Glyma.05G110900","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.05G145400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.05G145900","No alias","Glycine max","Protein of unknown function (DUF3537)","protein_coding" "Glyma.05G146400","No alias","Glycine max","glucosidase 1","protein_coding" "Glyma.05G146500","No alias","Glycine max","glucosidase 1","protein_coding" "Glyma.05G216500","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding" "Glyma.06G033500","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding" "Glyma.06G075100","No alias","Glycine max","O-Glycosyl hydrolases family 17 protein","protein_coding" "Glyma.06G112300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G146700","No alias","Glycine max","GTP-binding protein-related","protein_coding" "Glyma.06G203700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G213300","No alias","Glycine max","Stabilizer of iron transporter SufD / Polynucleotidyl transferase","protein_coding" "Glyma.06G218400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.06G313400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G003300","No alias","Glycine max","Glucose-methanol-choline (GMC) oxidoreductase family protein","protein_coding" "Glyma.07G021400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G056500","No alias","Glycine max","Plant protein 1589 of unknown function","protein_coding" "Glyma.07G082800","No alias","Glycine max","HAL3-like protein A","protein_coding" "Glyma.07G088700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G101300","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.07G116900","No alias","Glycine max","endoplasmic reticulum oxidoreductins 2","protein_coding" "Glyma.07G152200","No alias","Glycine max","electron transport SCO1/SenC family protein","protein_coding" "Glyma.07G170000","No alias","Glycine max","methyltransferases","protein_coding" "Glyma.07G205900","No alias","Glycine max","Thioesterase/thiol ester dehydrase-isomerase superfamily protein","protein_coding" "Glyma.07G221600","No alias","Glycine max","transferases, transferring hexosyl groups","protein_coding" "Glyma.07G226200","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.07G245500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.07G248800","No alias","Glycine max","Function unknown","protein_coding" "Glyma.07G273300","No alias","Glycine max","Beta-glucosidase, GBA2 type family protein","protein_coding" "Glyma.08G072700","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding" "Glyma.08G081600","No alias","Glycine max","double-stranded RNA binding protein-related / DsRBD protein-related","protein_coding" "Glyma.08G144700","No alias","Glycine max","essential meiotic endonuclease 1B","protein_coding" "Glyma.08G157000","No alias","Glycine max","RAB GTPASE HOMOLOG B18","protein_coding" "Glyma.08G181600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G197400","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding" "Glyma.08G206900","No alias","Glycine max","heat shock protein 91","protein_coding" "Glyma.08G209400","No alias","Glycine max","Protein of unknown function, DUF642","protein_coding" "Glyma.08G257700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.08G273600","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding" "Glyma.08G289802","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.08G290900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G295900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.08G362100","No alias","Glycine max","Eukaryotic protein of unknown function (DUF914)","protein_coding" "Glyma.09G003500","No alias","Glycine max","gametophytic factor 2","protein_coding" "Glyma.09G101200","No alias","Glycine max","SMAD/FHA domain-containing protein","protein_coding" "Glyma.09G122801","No alias","Glycine max","Function unknown","protein_coding" "Glyma.09G172300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.09G227001","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.09G238000","No alias","Glycine max","Transmembrane amino acid transporter family protein","protein_coding" "Glyma.09G238200","No alias","Glycine max","NOD26-like intrinsic protein 4;2","protein_coding" "Glyma.09G246700","No alias","Glycine max","cytochrome c-2","protein_coding" "Glyma.09G281700","No alias","Glycine max","nucleolin like 2","protein_coding" "Glyma.10G013900","No alias","Glycine max","beta-xylosidase 2","protein_coding" "Glyma.10G020300","No alias","Glycine max","Cation efflux family protein","protein_coding" "Glyma.10G020600","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding" "Glyma.10G031000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G065900","No alias","Glycine max","demeter-like 1","protein_coding" "Glyma.10G093801","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.10G098000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G120400","No alias","Glycine max","GRAM domain family protein","protein_coding" "Glyma.10G131000","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding" "Glyma.10G141000","No alias","Glycine max","Protein of unknown function (DUF300)","protein_coding" "Glyma.10G166600","No alias","Glycine max","phosphoenolpyruvate carboxylase kinase 1","protein_coding" "Glyma.10G169800","No alias","Glycine max","Subtilisin-like serine endopeptidase family protein","protein_coding" "Glyma.10G188100","No alias","Glycine max","actin-related protein 9","protein_coding" "Glyma.10G210100","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G211200","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.10G245000","No alias","Glycine max","IQ-domain 19","protein_coding" "Glyma.10G263800","No alias","Glycine max","Cupredoxin superfamily protein","protein_coding" "Glyma.10G276400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Glyma.11G005400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G009000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.11G013900","No alias","Glycine max","KH domain-containing protein","protein_coding" "Glyma.11G029300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G050300","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.11G089300","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "Glyma.11G101900","No alias","Glycine max","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding" "Glyma.11G126100","No alias","Glycine max","calreticulin 3","protein_coding" "Glyma.11G154800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding" "Glyma.11G165400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.11G174800","No alias","Glycine max","CRINKLY4 related 3","protein_coding" "Glyma.12G003300","No alias","Glycine max","RING/FYVE/PHD zinc finger superfamily protein","protein_coding" "Glyma.12G008300","No alias","Glycine max","FKBP-type peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "Glyma.12G071800","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.12G143000","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding" "Glyma.12G147700","No alias","Glycine max","Protein of unknown function (DUF300)","protein_coding" "Glyma.12G149500","No alias","Glycine max","epidermal patterning factor 1","protein_coding" "Glyma.12G168500","No alias","Glycine max","secE/sec61-gamma protein transport protein","protein_coding" "Glyma.12G237300","No alias","Glycine max","CCCH-type zinc finger protein with ARM repeat domain","protein_coding" "Glyma.13G068100","No alias","Glycine max","golgi alpha-mannosidase II","protein_coding" "Glyma.13G075200","No alias","Glycine max","serine carboxypeptidase-like 17","protein_coding" "Glyma.13G111800","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding" "Glyma.13G118700","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding" "Glyma.13G121900","No alias","Glycine max","HIT-type Zinc finger family protein","protein_coding" "Glyma.13G133500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.13G137000","No alias","Glycine max","Tudor/PWWP/MBT superfamily protein","protein_coding" "Glyma.13G173800","No alias","Glycine max","O-methyltransferase family protein","protein_coding" "Glyma.13G194600","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding" "Glyma.13G195100","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "Glyma.13G217800","No alias","Glycine max","potassium channel in Arabidopsis thaliana 1","protein_coding" "Glyma.13G217900","No alias","Glycine max","alpha-mannosidase 3","protein_coding" "Glyma.13G268000","No alias","Glycine max","gamma-glutamyl hydrolase 2","protein_coding" "Glyma.13G294600","No alias","Glycine max","nuclear fusion defective 6","protein_coding" "Glyma.13G326100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding" "Glyma.13G353400","No alias","Glycine max","phosphofructokinase 3","protein_coding" "Glyma.14G025400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.14G025900","No alias","Glycine max","Small nuclear ribonucleoprotein family protein","protein_coding" "Glyma.14G075800","No alias","Glycine max","GYF domain-containing protein","protein_coding" "Glyma.14G082600","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding" "Glyma.14G134200","No alias","Glycine max","deletion of SUV3 suppressor 1(I)","protein_coding" "Glyma.14G161600","No alias","Glycine max","cyclic nucleotide gated channel 1","protein_coding" "Glyma.14G202100","No alias","Glycine max","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "Glyma.14G218800","No alias","Glycine max","hexokinase 3","protein_coding" "Glyma.15G030500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G051700","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Glyma.15G059900","No alias","Glycine max","mitochondrial HSO70 2","protein_coding" "Glyma.15G065502","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding" "Glyma.15G087900","No alias","Glycine max","heat shock protein 70B","protein_coding" "Glyma.15G092700","No alias","Glycine max","Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit","protein_coding" "Glyma.15G094500","No alias","Glycine max","alpha-mannosidase 3","protein_coding" "Glyma.15G232800","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "Glyma.15G251900","No alias","Glycine max","glutathione S-transferase TAU 19","protein_coding" "Glyma.15G255000","No alias","Glycine max","BTB/POZ domain-containing protein","protein_coding" "Glyma.15G267500","No alias","Glycine max","Plant protein of unknown function (DUF936)","protein_coding" "Glyma.16G006500","No alias","Glycine max","TRF-like 6","protein_coding" "Glyma.16G020400","No alias","Glycine max","GRF1-interacting factor 3","protein_coding" "Glyma.16G040600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.16G042800","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Glyma.16G058200","No alias","Glycine max","uridine kinase/uracil phosphoribosyltransferase 1","protein_coding" "Glyma.16G058700","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.16G075000","No alias","Glycine max","mechanosensitive channel of small conductance-like 10","protein_coding" "Glyma.16G076700","No alias","Glycine max","xyloglucanase 113","protein_coding" "Glyma.16G099800","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.16G101100","No alias","Glycine max","GPI transamidase component Gpi16 subunit family protein","protein_coding" "Glyma.16G122100","No alias","Glycine max","protein kinase family protein","protein_coding" "Glyma.16G144700","No alias","Glycine max","Prolyl oligopeptidase family protein","protein_coding" "Glyma.16G163100","No alias","Glycine max","ATP binding;nucleic acid binding;helicases","protein_coding" "Glyma.16G166600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.16G208500","No alias","Glycine max","Translation initiation factor IF6","protein_coding" "Glyma.17G072700","No alias","Glycine max","zinc ion binding;nucleic acid binding","protein_coding" "Glyma.17G076400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.17G108400","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding" "Glyma.17G143500","No alias","Glycine max","Exostosin family protein","protein_coding" "Glyma.17G253400","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Glyma.18G086000","No alias","Glycine max","ENHANCED DOWNY MILDEW 2","protein_coding" "Glyma.18G134700","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.18G143200","No alias","Glycine max","poor homologous synapsis 1","protein_coding" "Glyma.18G158100","No alias","Glycine max","rotamase FKBP 1","protein_coding" "Glyma.18G176400","No alias","Glycine max","plant U-box 13","protein_coding" "Glyma.18G249300","No alias","Glycine max","Ribosomal protein S21 family protein","protein_coding" "Glyma.18G264200","No alias","Glycine max","EID1-like 2","protein_coding" "Glyma.18G270100","No alias","Glycine max","Malectin/receptor-like protein kinase family protein","protein_coding" "Glyma.18G270900","No alias","Glycine max","Malectin/receptor-like protein kinase family protein","protein_coding" "Glyma.18G292300","No alias","Glycine max","Translation initiation factor IF2/IF5","protein_coding" "Glyma.18G296600","No alias","Glycine max","abscisic acid (aba)-deficient 4","protein_coding" "Glyma.19G068800","No alias","Glycine max","Transcription factor jumonji (jmjC) domain-containing protein","protein_coding" "Glyma.19G122700","No alias","Glycine max","myb-like HTH transcriptional regulator family protein","protein_coding" "Glyma.19G149500","No alias","Glycine max","spindle pole body component 98","protein_coding" "Glyma.19G168300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.19G179600","No alias","Glycine max","TFIIB zinc-binding protein","protein_coding" "Glyma.19G191700","No alias","Glycine max","heat shock transcription factor A3","protein_coding" "Glyma.19G196551","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding" "Glyma.19G210000","No alias","Glycine max","asparagine-linked glycosylation 3","protein_coding" "Glyma.19G211500","No alias","Glycine max","U3 ribonucleoprotein (Utp) family protein","protein_coding" "Glyma.19G262400","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G019967","No alias","Glycine max","transferases, transferring hexosyl groups","protein_coding" "Glyma.20G020033","No alias","Glycine max","transferases, transferring hexosyl groups","protein_coding" "Glyma.20G024900","No alias","Glycine max","Function unknown","protein_coding" "Glyma.20G131100","No alias","Glycine max","Gibberellin-regulated family protein","protein_coding" "Glyma.20G150800","No alias","Glycine max","protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases","protein_coding" "Glyma.20G166600","No alias","Glycine max","Duplicated homeodomain-like superfamily protein","protein_coding" "Glyma.20G172700","No alias","Glycine max","Laccase/Diphenol oxidase family protein","protein_coding" "Glyma.20G187700","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "Glyma.20G231400","No alias","Glycine max","Mitochondrial inner membrane translocase complex, subunit Tim44-related protein","protein_coding" "Glyma.20G238700","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding" "Glyma.20G247700","No alias","Glycine max","ENTH/VHS family protein","protein_coding" "GRMZM2G002361","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G008696","No alias","Zea mays","Sec14p-like phosphatidylinositol transfer family protein","protein_coding" "GRMZM2G009021","No alias","Zea mays","SKP1/ASK-interacting protein 5","protein_coding" "GRMZM2G010306","No alias","Zea mays","Dynamin related protein 5A","protein_coding" "GRMZM2G011178","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G018923","No alias","Zea mays","transferases, transferring hexosyl groups","protein_coding" "GRMZM2G019291","No alias","Zea mays","TLD-domain containing nucleolar protein","protein_coding" "GRMZM2G020034","No alias","Zea mays","Regulator of Vps4 activity in the MVB pathway protein","protein_coding" "GRMZM2G020594","No alias","Zea mays","Galactose oxidase/kelch repeat superfamily protein","protein_coding" "GRMZM2G021107","No alias","Zea mays","Protein of unknown function (DUF565)","protein_coding" "GRMZM2G021422","No alias","Zea mays","transferases, transferring hexosyl groups","protein_coding" "GRMZM2G021834","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G023214","No alias","Zea mays","Aspartate kinase family protein","protein_coding" "GRMZM2G026556","No alias","Zea mays","Ankyrin repeat family protein / BTB/POZ domain-containing protein","protein_coding" "GRMZM2G031620","No alias","Zea mays","protamine P1 family protein","protein_coding" "GRMZM2G031850","No alias","Zea mays","Pyridoxamine 5\'-phosphate oxidase family protein","protein_coding" "GRMZM2G041231","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "GRMZM2G042245","No alias","Zea mays","5\'-AMP-activated protein kinase-related","protein_coding" "GRMZM2G043193","No alias","Zea mays","ammonium transporter 2","protein_coding" "GRMZM2G043226","No alias","Zea mays","embryo defective 2739","protein_coding" "GRMZM2G044423","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G050553","No alias","Zea mays","Calcium-binding EF hand family protein","protein_coding" "GRMZM2G055437","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding" "GRMZM2G060045","No alias","Zea mays","peroxisomal ABC transporter 1","protein_coding" "GRMZM2G062576","No alias","Zea mays","receptor like protein 7","protein_coding" "GRMZM2G066044","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G066362","No alias","Zea mays","asparagine-linked glycosylation 3","protein_coding" "GRMZM2G073931","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G074124","No alias","Zea mays","plant-specific transcription factor YABBY family protein","protein_coding" "GRMZM2G074236","No alias","Zea mays","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding" "GRMZM2G076617","No alias","Zea mays","gamma response gene 1","protein_coding" "GRMZM2G083309","No alias","Zea mays","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding" "GRMZM2G085660","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G086474","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "GRMZM2G086604","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding" "GRMZM2G087275","No alias","Zea mays","long-chain base1","protein_coding" "GRMZM2G095185","No alias","Zea mays","TIP41-like family protein","protein_coding" "GRMZM2G095701","No alias","Zea mays","polymerase gamma 2","protein_coding" "GRMZM2G096920","No alias","Zea mays","5\'-3\' exonuclease family protein","protein_coding" "GRMZM2G108057","No alias","Zea mays","phosphate deficiency response 2","protein_coding" "GRMZM2G111955","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G112745","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G114394","No alias","Zea mays","PA-domain containing subtilase family protein","protein_coding" "GRMZM2G115817","No alias","Zea mays","EID1-like 2","protein_coding" "GRMZM2G129633","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G130230","No alias","Zea mays","glucose-6-phosphate dehydrogenase 6","protein_coding" "GRMZM2G131836","No alias","Zea mays","cinnamoyl coa reductase 1","protein_coding" "GRMZM2G134903","No alias","Zea mays","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding" "GRMZM2G137541","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "GRMZM2G138964","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G139650","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G146305","No alias","Zea mays","Protein kinase superfamily protein","protein_coding" "GRMZM2G150762","No alias","Zea mays","SPFH/Band 7/PHB domain-containing membrane-associated protein family","protein_coding" "GRMZM2G150772","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding" "GRMZM2G152638","No alias","Zea mays","O-Glycosyl hydrolases family 17 protein","protein_coding" "GRMZM2G158093","No alias","Zea mays","heat shock protein 70 (Hsp 70) family protein","protein_coding" "GRMZM2G159397","No alias","Zea mays","K-box region and MADS-box transcription factor family protein","protein_coding" "GRMZM2G159498","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding" "GRMZM2G162663","No alias","Zea mays","acetyl-CoA synthetase","protein_coding" "GRMZM2G168953","No alias","Zea mays","receptor lectin kinase","protein_coding" "GRMZM2G169943","No alias","Zea mays","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "GRMZM2G170516","No alias","Zea mays","trigalactosyldiacylglycerol 1","protein_coding" "GRMZM2G171556","No alias","Zea mays","serine racemase","protein_coding" "GRMZM2G304362","No alias","Zea mays","ribonucleotide reductase 1","protein_coding" "GRMZM2G306806","No alias","Zea mays","Protein of unknown function (DUF3527)","protein_coding" "GRMZM2G334658","No alias","Zea mays","Protein of unknown function, DUF584","protein_coding" "GRMZM2G356046","No alias","Zea mays","Glycosyl hydrolase superfamily protein","protein_coding" "GRMZM2G356378","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G358187","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G361242","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "GRMZM2G363971","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G385925","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GRMZM2G413796","No alias","Zea mays","TGACG motif-binding factor 4","protein_coding" "GRMZM2G445201","No alias","Zea mays","Galactosyl transferase GMA12/MNN10 family protein","protein_coding" "GRMZM2G459824","No alias","Zea mays","mitogen-activated protein kinase kinase kinase 14","protein_coding" "GRMZM2G475882","No alias","Zea mays","auxin response factor 6","protein_coding" "GRMZM2G570157","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G802546","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G814549","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "GRMZM5G830671","No alias","Zea mays","homeobox protein 2","protein_coding" "GRMZM5G837841","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G870571","No alias","Zea mays","fucosyltransferase 1","protein_coding" "GRMZM5G880306","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G895991","No alias","Zea mays","L-Aspartase-like family protein","protein_coding" "HORVU0Hr1G026370.1","No alias","Hordeum vulgare","translation elongation factor *(EF-Tu)","protein_coding" "HORVU0Hr1G038620.1","No alias","Hordeum vulgare","component *(KU80) of Ku70-Ku80 helicase complex","protein_coding" "HORVU1Hr1G023060.5","No alias","Hordeum vulgare","dihydrolipoamide dehydrogenase component of plastidial pyruvate dehydrogenase complex","protein_coding" "HORVU1Hr1G040250.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU1Hr1G045110.3","No alias","Hordeum vulgare","E3 ubiquitin ligase","protein_coding" "HORVU1Hr1G046420.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU1Hr1G047690.1","No alias","Hordeum vulgare","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding" "HORVU1Hr1G064480.1","No alias","Hordeum vulgare","RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI)","protein_coding" "HORVU1Hr1G071160.1","No alias","Hordeum vulgare","DYRK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU1Hr1G073510.17","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU1Hr1G078030.47","No alias","Hordeum vulgare","TruD-type tRNA pseudouridine synthase","protein_coding" "HORVU1Hr1G079900.2","No alias","Hordeum vulgare","flap structure-specific endonuclease *(FEN1) & flap structure-specific endonuclease *(FEN1)","protein_coding" "HORVU1Hr1G081020.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU1Hr1G081470.4","No alias","Hordeum vulgare","dodecenoyl-CoA isomerase","protein_coding" "HORVU1Hr1G087340.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU1Hr1G089440.11","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G006330.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G011580.27","No alias","Hordeum vulgare","component *(CPSF160/Yhh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding" "HORVU2Hr1G012710.2","No alias","Hordeum vulgare","copper-containing amine oxidase *(CuAO) & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "HORVU2Hr1G012760.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G019570.1","No alias","Hordeum vulgare","tRNA cytidine acetyltransferase adaptor protein","protein_coding" "HORVU2Hr1G024160.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G027790.1","No alias","Hordeum vulgare","alpha-1,3-mannosyltransferase *(ALG3) & EC_2.4 glycosyltransferase","protein_coding" "HORVU2Hr1G029660.12","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G030940.1","No alias","Hordeum vulgare","component *(NRP-ABCDE6) of RNA polymerase complexes","protein_coding" "HORVU2Hr1G033000.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G038230.12","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G041800.16","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G046680.19","No alias","Hordeum vulgare","tRNA wybutosine biosynthesis enzyme *(TYW2/TYW3)","protein_coding" "HORVU2Hr1G048220.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G066320.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G066740.2","No alias","Hordeum vulgare","component *(TRM61) of TRM61-TRM6 tRNA adenosine-methyltransferase complex & EC_2.1 transferase transferring one-carbon group","protein_coding" "HORVU2Hr1G075330.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G081450.2","No alias","Hordeum vulgare","associated component *(POT) of telomerase ribonucleoprotein complex","protein_coding" "HORVU2Hr1G091180.2","No alias","Hordeum vulgare","component *(TFC7/Tau55) of TFIIIc transcription factor complex","protein_coding" "HORVU2Hr1G093400.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G097570.20","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G104190.33","No alias","Hordeum vulgare","mannosyltransferase-II *(PIG-V)","protein_coding" "HORVU2Hr1G105520.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G108050.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G109150.13","No alias","Hordeum vulgare","regulatory protein *(PACP) of PRC2 histone methylation complex","protein_coding" "HORVU3Hr1G011460.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G016000.2","No alias","Hordeum vulgare","alpha-1,3-mannosyltransferase *(ALG3) & EC_2.4 glycosyltransferase","protein_coding" "HORVU3Hr1G017020.13","No alias","Hordeum vulgare","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & hydrogen peroxide receptor kinase *(HPCA)","protein_coding" "HORVU3Hr1G017600.1","No alias","Hordeum vulgare","component *(PIG-H) of GPI N-acetylglucosamine transferase complex","protein_coding" "HORVU3Hr1G026230.3","No alias","Hordeum vulgare","component *(POLD3) of DNA polymerase delta complex","protein_coding" "HORVU3Hr1G029510.1","No alias","Hordeum vulgare","component *(uS6m) of small mitoribosomal-subunit proteome","protein_coding" "HORVU3Hr1G039880.10","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU3Hr1G049790.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G052340.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G070960.2","No alias","Hordeum vulgare","Golgin-type membrane tethering protein *(GC1)","protein_coding" "HORVU3Hr1G087360.2","No alias","Hordeum vulgare","regulatory protein of RNA homeostasis","protein_coding" "HORVU3Hr1G088460.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G088480.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G090350.1","No alias","Hordeum vulgare","large subunit of TFIIIf transcription factor module","protein_coding" "HORVU3Hr1G094450.2","No alias","Hordeum vulgare","class-I glucosidase I & EC_3.2 glycosylase","protein_coding" "HORVU3Hr1G113090.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G002710.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G023490.7","No alias","Hordeum vulgare","CDKB protein kinase & catalytic component *(CDKB) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU4Hr1G029030.22","No alias","Hordeum vulgare","large subunit of U2AF pre-RNA splicing auxiliary factor complex","protein_coding" "HORVU4Hr1G047580.2","No alias","Hordeum vulgare","core component *(GAR1) of H/ACA snoRNP RNA pseudouridylation complex","protein_coding" "HORVU4Hr1G050280.1","No alias","Hordeum vulgare","lytic vacuole protein sorting receptor *(VSR)","protein_coding" "HORVU4Hr1G061650.10","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G064080.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G066730.1","No alias","Hordeum vulgare","scaffold nucleoporin of nuclear pore complex *(NUP155)","protein_coding" "HORVU4Hr1G068400.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G069790.2","No alias","Hordeum vulgare","DNA repair endonuclease *(XPG)","protein_coding" "HORVU4Hr1G072020.1","No alias","Hordeum vulgare","F-class RAB GTPase & vesicle tethering small GTPase *(RAB5)","protein_coding" "HORVU4Hr1G078020.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G082690.4","No alias","Hordeum vulgare","exoribonuclease *(RRP44a)","protein_coding" "HORVU4Hr1G084280.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G084730.2","No alias","Hordeum vulgare","phragmoplastin-interacting factor *(PHIP1)","protein_coding" "HORVU5Hr1G002000.8","No alias","Hordeum vulgare","neutral ceramidase *(NCER) & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding" "HORVU5Hr1G006710.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G011070.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G040030.5","No alias","Hordeum vulgare","calcium sensor *(CBL)","protein_coding" "HORVU5Hr1G052660.2","No alias","Hordeum vulgare","regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin ring complex","protein_coding" "HORVU5Hr1G068380.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G075110.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G079670.1","No alias","Hordeum vulgare","EC_2.4 glycosyltransferase","protein_coding" "HORVU5Hr1G079730.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G091740.8","No alias","Hordeum vulgare","alpha-1,4-mannosyltransferase *(PIG-M)","protein_coding" "HORVU5Hr1G092180.1","No alias","Hordeum vulgare","nucleoporin of nuclear pore complex *(GP210)","protein_coding" "HORVU5Hr1G103360.5","No alias","Hordeum vulgare","regulatory component *(ALIS) of ALA-ALIS flippase complex & regulatory component *(ALIS) of phospholipid flippase complex","protein_coding" "HORVU5Hr1G104380.1","No alias","Hordeum vulgare","methylation reader *(ECT)","protein_coding" "HORVU5Hr1G111940.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G115320.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G115350.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G115360.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G115410.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G016810.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G024100.1","No alias","Hordeum vulgare","multifunctional enzyme *(MFP)","protein_coding" "HORVU6Hr1G038450.4","No alias","Hordeum vulgare","microtubule-stabilizing factor *(WDL)","protein_coding" "HORVU6Hr1G072070.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G073000.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G080410.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G087300.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G091550.14","No alias","Hordeum vulgare","catalytic component of PP1 phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding" "HORVU6Hr1G093090.3","No alias","Hordeum vulgare","regulatory factor *(CSU2) of COP1 activity","protein_coding" "HORVU6Hr1G095080.4","No alias","Hordeum vulgare","outer membrane porin *(OEP21)","protein_coding" "HORVU7Hr1G011210.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G036660.1","No alias","Hordeum vulgare","regulatory protein *(FBW2) of RNA-induced silencing complex (RISC) assembly & substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex","protein_coding" "HORVU7Hr1G043360.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G043750.22","No alias","Hordeum vulgare","mannosyltransferase-II *(PIG-V)","protein_coding" "HORVU7Hr1G045770.7","No alias","Hordeum vulgare","microtubule-associated protein *(MAP65-2)","protein_coding" "HORVU7Hr1G046070.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G053190.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G053940.1","No alias","Hordeum vulgare","uridine/cytidine kinase & EC_2.4 glycosyltransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU7Hr1G054070.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G054140.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G054920.1","No alias","Hordeum vulgare","component *(Tim8) of inner mitochondrion membrane TIM22 insertion system","protein_coding" "HORVU7Hr1G063970.1","No alias","Hordeum vulgare","mRNA poly-A-tail binding factor *(PABP)","protein_coding" "HORVU7Hr1G065590.7","No alias","Hordeum vulgare","cyt-b561 electron shuttle hemoprotein *(CYBASC)","protein_coding" "HORVU7Hr1G083070.5","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G087590.9","No alias","Hordeum vulgare","active component *(ALA) of ALA-ALIS flippase complex & P4-type ATPase component *(ALA) of phospholipid flippase complex & EC_3.6 hydrolase acting on acid anhydride","protein_coding" "HORVU7Hr1G099340.17","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU7Hr1G110630.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "Kfl00001_0760","kfl00001_0760_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00003_0070","kfl00003_0070_v1.1","Klebsormidium nitens","(at4g36190 : 439.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36195.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 878.0) & (original description: no original description)","protein_coding" "Kfl00005_0300","kfl00005_0300_v1.1","Klebsormidium nitens","(at2g47760 : 351.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 702.0) & (original description: no original description)","protein_coding" "Kfl00010_0650","kfl00010_0650_v1.1","Klebsormidium nitens","(at5g22130 : 430.0) member of Glycosyltransferase Family- 50; PEANUT 1 (PNT1); FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups, alpha-1,4-mannosyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process, cellulose biosynthetic process, plant-type cell wall biogenesis, embryo development, cell division; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, DXD (InterPro:IPR007704). & (q500w7|pigm_arath : 430.0) GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) (Protein PEANUT1) - Arabidopsis thaliana (Mouse-ear cress) & (reliability: 860.0) & (original description: no original description)","protein_coding" "Kfl00016_0380","kfl00016_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00021_0020","kfl00021_0020_v1.1","Klebsormidium nitens","(at2g41150 : 125.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)","protein_coding" "Kfl00040_0120","kfl00040_0120_v1.1","Klebsormidium nitens","(at4g19690 : 212.0) Fe(II) transport protein (IRT1); iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 2264 Blast hits to 2071 proteins in 344 species: Archae - 4; Bacteria - 222; Metazoa - 575; Fungi - 696; Plants - 525; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)","protein_coding" "Kfl00047_0220","kfl00047_0220_v1.1","Klebsormidium nitens","(at2g28100 : 409.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 392.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 818.0) & (original description: no original description)","protein_coding" "Kfl00049_0060","kfl00049_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00050_0520","kfl00050_0520_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00054_0150","kfl00054_0150_v1.1","Klebsormidium nitens","(at4g32060 : 300.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)","protein_coding" "Kfl00058_0220","kfl00058_0220_v1.1","Klebsormidium nitens","(at4g34030 : 694.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1388.0) & (original description: no original description)","protein_coding" "Kfl00069_0310","kfl00069_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00073_0190","kfl00073_0190_v1.1","Klebsormidium nitens","(at5g67030 : 88.6) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (q40412|aba2_nicpl : 84.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 177.2) & (original description: no original description)","protein_coding" "Kfl00075_0354","kfl00075_0354_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00079_0040","kfl00079_0040_v1.1","Klebsormidium nitens","(at1g78930 : 102.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "Kfl00080_0300","kfl00080_0300_v1.1","Klebsormidium nitens","(at1g11880 : 296.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)","protein_coding" "Kfl00093_0010","kfl00093_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00104_0080","kfl00104_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00106_0110","kfl00106_0110_v1.1","Klebsormidium nitens","(at5g13690 : 784.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1568.0) & (original description: no original description)","protein_coding" "Kfl00106_0200","kfl00106_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00112_0110","kfl00112_0110_v1.1","Klebsormidium nitens","(at5g49650 : 596.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1192.0) & (original description: no original description)","protein_coding" "Kfl00133_0140","kfl00133_0140_v1.1","Klebsormidium nitens","(at3g62310 : 1153.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2306.0) & (original description: no original description)","protein_coding" "Kfl00145_0220","kfl00145_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00147_0015","kfl00147_0015_v1.1","Klebsormidium nitens","(at1g78610 : 185.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)","protein_coding" "Kfl00148_0100","kfl00148_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00168_0060","kfl00168_0060_v1.1","Klebsormidium nitens","(at5g03910 : 398.0) member of ATH subfamily; ABC2 homolog 12 (ATH12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 14 (TAIR:AT1G28010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 221.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 796.0) & (original description: no original description)","protein_coding" "Kfl00168_0170","kfl00168_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00169_0150","kfl00169_0150_v1.1","Klebsormidium nitens","(at3g58530 : 290.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 9313 Blast hits to 3891 proteins in 246 species: Archae - 0; Bacteria - 470; Metazoa - 3686; Fungi - 1044; Plants - 3046; Viruses - 9; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 580.0) & (original description: no original description)","protein_coding" "Kfl00176_0020","kfl00176_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00183_0040","kfl00183_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00195_0070","kfl00195_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00205_0100","kfl00205_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00207_0050","kfl00207_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00222_0130","kfl00222_0130_v1.1","Klebsormidium nitens","(at4g10960 : 474.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43070|gale1_pea : 448.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 948.0) & (original description: no original description)","protein_coding" "Kfl00224_0070","kfl00224_0070_v1.1","Klebsormidium nitens","(at4g02485 : 135.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G31600.2); Has 487 Blast hits to 486 proteins in 165 species: Archae - 0; Bacteria - 93; Metazoa - 167; Fungi - 38; Plants - 88; Viruses - 3; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 270.0) & (original description: no original description)","protein_coding" "Kfl00235_0150","kfl00235_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00250_0080","kfl00250_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00275_0160","kfl00275_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00280_0130","kfl00280_0130_v1.1","Klebsormidium nitens","(at5g63060 : 230.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 1770 Blast hits to 1770 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 470; Plants - 671; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)","protein_coding" "Kfl00283_0170","kfl00283_0170_v1.1","Klebsormidium nitens","(at1g52530 : 300.0) CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)","protein_coding" "Kfl00290_0030","kfl00290_0030_v1.1","Klebsormidium nitens","(at2g30460 : 398.0) Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 2822 Blast hits to 2815 proteins in 387 species: Archae - 4; Bacteria - 285; Metazoa - 660; Fungi - 413; Plants - 1167; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)","protein_coding" "Kfl00302_0150","kfl00302_0150_v1.1","Klebsormidium nitens","(at5g48930 : 87.8) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "Kfl00356_0060","kfl00356_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00356_0070","kfl00356_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00358_0140","kfl00358_0140_v1.1","Klebsormidium nitens","(at4g34950 : 295.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16660.1); Has 3379 Blast hits to 3250 proteins in 882 species: Archae - 26; Bacteria - 1593; Metazoa - 4; Fungi - 302; Plants - 604; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)","protein_coding" "Kfl00388_0100","kfl00388_0100_v1.1","Klebsormidium nitens","(at1g76150 : 257.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 514.0) & (original description: no original description)","protein_coding" "Kfl00407_0060","kfl00407_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00432_0080","kfl00432_0080_v1.1","Klebsormidium nitens","(at3g18810 : 214.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49270.1); Has 358517 Blast hits to 170503 proteins in 5329 species: Archae - 673; Bacteria - 45340; Metazoa - 63900; Fungi - 24855; Plants - 39134; Viruses - 3054; Other Eukaryotes - 181561 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 197.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 388.0) & (original description: no original description)","protein_coding" "Kfl00432_0090","kfl00432_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00436_0050","kfl00436_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00464_0110","kfl00464_0110_v1.1","Klebsormidium nitens","(at1g18100 : 107.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (q9xh44|cet1_tobac : 100.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (reliability: 214.0) & (original description: no original description)","protein_coding" "Kfl00466_0020","kfl00466_0020_v1.1","Klebsormidium nitens","(at2g18876 : 240.0) Afadin/alpha-actinin-binding protein; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT5G57410.2); Has 2181 Blast hits to 1953 proteins in 285 species: Archae - 6; Bacteria - 183; Metazoa - 1166; Fungi - 140; Plants - 107; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)","protein_coding" "Kfl00481_0070","kfl00481_0070_v1.1","Klebsormidium nitens","(at3g09580 : 394.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 788.0) & (original description: no original description)","protein_coding" "Kfl00553_0010","kfl00553_0010_v1.1","Klebsormidium nitens","(at2g17820 : 247.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)","protein_coding" "Kfl00559_0050","kfl00559_0050_v1.1","Klebsormidium nitens","(at1g04080 : 411.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (reliability: 822.0) & (original description: no original description)","protein_coding" "Kfl00564_0020","kfl00564_0020_v1.1","Klebsormidium nitens","(at1g60890 : 89.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (reliability: 170.2) & (original description: no original description)","protein_coding" "Kfl00690_0040","kfl00690_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00693_0070","kfl00693_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00743_0050","kfl00743_0050_v1.1","Klebsormidium nitens","(at1g19340 : 250.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 500.0) & (original description: no original description)","protein_coding" "Kfl00745_0040","kfl00745_0040_v1.1","Klebsormidium nitens","(at4g14070 : 568.0) Plastidic acyl activating enzyme involved in the elongation of exogenous medium-chain fatty acids to 16- and 18-carbon fatty acids.; acyl-activating enzyme 15 (AAE15); FUNCTIONS IN: long-chain fatty acid [acyl-carrier-protein] ligase activity; INVOLVED IN: fatty acid elongation; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G23790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24145|4cl1_tobac : 94.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1136.0) & (original description: no original description)","protein_coding" "Kfl00753_0050","kfl00753_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00757_0050","kfl00757_0050_v1.1","Klebsormidium nitens","(at2g20190 : 468.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 936.0) & (original description: no original description)","protein_coding" "Kfl00765_0040","kfl00765_0040_v1.1","Klebsormidium nitens","(at4g31600 : 199.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description)","protein_coding" "Kfl00776_0050","kfl00776_0050_v1.1","Klebsormidium nitens","(at5g21060 : 238.0) Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: homoserine dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, aspartate family amino acid biosynthetic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine dehydrogenase, short (InterPro:IPR022697), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 7513 Blast hits to 7513 proteins in 2318 species: Archae - 181; Bacteria - 5355; Metazoa - 3; Fungi - 163; Plants - 133; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p49079|akh1_maize : 159.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 476.0) & (original description: no original description)","protein_coding" "Kfl00877_0050","kfl00877_0050_v1.1","Klebsormidium nitens","(at5g09680 : 162.0) Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol.; reduced lateral root formation (RLF); FUNCTIONS IN: heme binding; INVOLVED IN: lateral root formation; LOCATED IN: cytosol; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3049 Blast hits to 3033 proteins in 420 species: Archae - 2; Bacteria - 7; Metazoa - 694; Fungi - 1150; Plants - 759; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description)","protein_coding" "Kfl00929_0030","kfl00929_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00931_0060","kfl00931_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00932_0030","kfl00932_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00974_0040","kfl00974_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00974_0050","kfl00974_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00989_0030","kfl00989_0030_v1.1","Klebsormidium nitens","(q7x7l3|elp3_orysa : 203.0) Probable histone acetyltransferase ELP3 (EC 2.3.1.48) (Elongator component 3) (Elongation protein 3) - Oryza sativa (Rice) & (at5g50320 : 194.0) A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1ñELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.; ELONGATA 3 (ELO3); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Histone acetyltransferase ELP3 (InterPro:IPR005910), Radical SAM (InterPro:IPR007197), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "Kfl01004_g3","kfl01004_g3_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g33060","No alias","Oryza sativa","HEAT repeat family protein, putative, expressed","protein_coding" "LOC_Os01g37510","No alias","Oryza sativa","peptide deformylase, putative, expressed","protein_coding" "LOC_Os01g38680","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding" "LOC_Os01g46270","No alias","Oryza sativa","wax synthase isoform 3, putative, expressed","protein_coding" "LOC_Os01g55210","No alias","Oryza sativa","OsFBX25 - F-box domain containing protein, expressed","protein_coding" "LOC_Os01g67290","No alias","Oryza sativa","cyclin-related protein, putative, expressed","protein_coding" "LOC_Os02g11705","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g16210","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os02g17450","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os02g23930","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g28720","No alias","Oryza sativa","spotted leaf 11, putative, expressed","protein_coding" "LOC_Os02g30190","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g10970","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g21640","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g22310","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g27850","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g52500","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g54850","No alias","Oryza sativa","NLI interacting factor-like phosphatase, putative, expressed","protein_coding" "LOC_Os03g55570","No alias","Oryza sativa","upstream activation factor subunit spp27, putative, expressed","protein_coding" "LOC_Os03g59030","No alias","Oryza sativa","UDP-rhamnose rhamnosyltransferase, putative, expressed","protein_coding" "LOC_Os04g09520","No alias","Oryza sativa","LTPL59 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed","protein_coding" "LOC_Os04g23620","No alias","Oryza sativa","D-mannose binding lectin family protein, expressed","protein_coding" "LOC_Os04g31310","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g41540","No alias","Oryza sativa","OsCML22 - Calmodulin-related calcium sensor protein, expressed","protein_coding" "LOC_Os04g49650","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding" "LOC_Os05g23250","No alias","Oryza sativa","Leucine Rich Repeat family protein, expressed","protein_coding" "LOC_Os05g35700","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g03486","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g27680","No alias","Oryza sativa","retrotransposon protein, putative, Ty1-copia subclass, expressed","protein_coding" "LOC_Os06g40180","No alias","Oryza sativa","phospholipase D, putative, expressed","protein_coding" "LOC_Os06g46230","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os07g38940","No alias","Oryza sativa","ubiquitin-conjugating enzyme, putative, expressed","protein_coding" "LOC_Os09g07294","No alias","Oryza sativa","purity of essence, putative, expressed","protein_coding" "LOC_Os09g30980","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed","protein_coding" "LOC_Os10g09670","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g37180","No alias","Oryza sativa","glycine cleavage system H protein, putative, expressed","protein_coding" "LOC_Os10g42080","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g19790","No alias","Oryza sativa","O-methyltransferase, putative, expressed","protein_coding" "LOC_Os12g12110","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g27920","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g31480","No alias","Oryza sativa","GPI mannosyltransferase 2, putative, expressed","protein_coding" "LOC_Os12g33070","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, putative, expressed","protein_coding" "LOC_Os12g35990","No alias","Oryza sativa","expressed protein","protein_coding" "Mp1g04430.1","No alias","Marchantia polymorpha","PS1 sister chromatid separation regulator protein","protein_coding" "Mp1g08680.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g12610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g14440.1","No alias","Marchantia polymorpha","regulator protein (ETO)","protein_coding" "Mp1g17770.1","No alias","Marchantia polymorpha","deadenylase component CCR4 of CCR4-NOT complex","protein_coding" "Mp1g24000.1","No alias","Marchantia polymorpha","NDC1 nucleoporin of nuclear pore complex","protein_coding" "Mp2g13250.1","No alias","Marchantia polymorpha","Protein yippee-like At4g27745 OS=Arabidopsis thaliana (sp|q9t096|yipl6_arath : 121.0)","protein_coding" "Mp2g21540.1","No alias","Marchantia polymorpha","mannosyltransferase-II (PIG-V)","protein_coding" "Mp2g22180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g01510.1","No alias","Marchantia polymorpha","UFM ligase E3 protein","protein_coding" "Mp3g06600.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g12910.1","No alias","Marchantia polymorpha","cation:chloride co-transporter (CCC)","protein_coding" "Mp3g15300.1","No alias","Marchantia polymorpha","Probable protein S-acyltransferase 17 OS=Arabidopsis thaliana (sp|q3ebc2|zdhc5_arath : 333.0)","protein_coding" "Mp4g05300.1","No alias","Marchantia polymorpha","Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica (sp|q338n2|c3h62_orysj : 97.8)","protein_coding" "Mp4g07190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g08810.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g09430.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g14750.1","No alias","Marchantia polymorpha","DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana (sp|q682d3|xrcc2_arath : 198.0)","protein_coding" "Mp5g01830.1","No alias","Marchantia polymorpha","LWD circadian clock activation factor","protein_coding" "Mp5g08950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g12350.1","No alias","Marchantia polymorpha","transaldolase","protein_coding" "Mp6g01850.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g02680.1","No alias","Marchantia polymorpha","Peroxidase 29 OS=Arabidopsis thaliana (sp|q9lsp0|per29_arath : 213.0)","protein_coding" "Mp7g09010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g00710.1","No alias","Marchantia polymorpha","alpha-1,3-mannosyltransferase (ALG3)","protein_coding" "Mp8g16130.1","No alias","Marchantia polymorpha","alpha-1,4-mannosyltransferase (PIG-M)","protein_coding" "Mp8g17150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g17300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Potri.001G008600","No alias","Populus trichocarpa","transferases, transferring hexosyl groups","protein_coding" "Potri.003G216900","No alias","Populus trichocarpa","transferases, transferring hexosyl groups","protein_coding" "Potri.014G131600","No alias","Populus trichocarpa","asparagine-linked glycosylation 3","protein_coding" "Pp1s100_121V6","No alias","Physcomitrella patens","protein kinase","protein_coding" "Pp1s101_182V6","No alias","Physcomitrella patens","hypothetical protein [Cyanidioschyzon merolae]","protein_coding" "Pp1s102_14V6","No alias","Physcomitrella patens","branched-chain amino acid aminotransferase-like protein","protein_coding" "Pp1s102_63V6","No alias","Physcomitrella patens","tryptophan decarboxylase","protein_coding" "Pp1s104_208V6","No alias","Physcomitrella patens","F28P10.140; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s109_57V6","No alias","Physcomitrella patens","F3N11.24; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s127_27V6","No alias","Physcomitrella patens","T31K7.3; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s130_12V6","No alias","Physcomitrella patens","microtubule organization protein","protein_coding" "Pp1s143_32V6","No alias","Physcomitrella patens","F3E22.19; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s154_12V6","No alias","Physcomitrella patens","F28M20.140; ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana]","protein_coding" "Pp1s155_107V6","No alias","Physcomitrella patens","Probable proteasome inhibitor [Arabidopsis thaliana]","protein_coding" "Pp1s156_59V6","No alias","Physcomitrella patens","zinc finger family expressed","protein_coding" "Pp1s163_27V6","No alias","Physcomitrella patens","serine threonine protein kinase","protein_coding" "Pp1s166_43V6","No alias","Physcomitrella patens","likely protein kinase","protein_coding" "Pp1s169_125V6","No alias","Physcomitrella patens","casein kinase ii subunit beta-4","protein_coding" "Pp1s16_374V6","No alias","Physcomitrella patens","endo- -beta-","protein_coding" "Pp1s180_110V6","No alias","Physcomitrella patens","branched-chain amino acid aminotransferase","protein_coding" "Pp1s183_83V6","No alias","Physcomitrella patens","cyclic nucleotide and calmodulin-regulated ion channel","protein_coding" "Pp1s18_281V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s18_332V6","No alias","Physcomitrella patens","n-acetylglucosaminyl transferase component gpi1","protein_coding" "Pp1s196_15V6","No alias","Physcomitrella patens","folylpolyglutamate synthase","protein_coding" "Pp1s199_64V6","No alias","Physcomitrella patens","ubiquitin-protein ligase e3 component","protein_coding" "Pp1s1_662V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s200_74V6","No alias","Physcomitrella patens","lysosomal pro-x","protein_coding" "Pp1s201_62V6","No alias","Physcomitrella patens","dead deah box helicase domain protein","protein_coding" "Pp1s20_64V6","No alias","Physcomitrella patens","F13E7.7; GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana]","protein_coding" "Pp1s212_21V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s227_35V6","No alias","Physcomitrella patens","T18E12.18; ATP/GTP-binding protein family [Arabidopsis thaliana]","protein_coding" "Pp1s231_24V6","No alias","Physcomitrella patens","clathrin coat assembly protein","protein_coding" "Pp1s23_133V6","No alias","Physcomitrella patens","molybdenum cofactor sulfurase","protein_coding" "Pp1s246_32V6","No alias","Physcomitrella patens","fad-dependent oxidoreductase","protein_coding" "Pp1s291_89V6","No alias","Physcomitrella patens","F4C21.14; xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [EC:2.4.1.207] [Arabidopsis thaliana]","protein_coding" "Pp1s293_7V6","No alias","Physcomitrella patens","sphingosine kinase","protein_coding" "Pp1s294_26V6","No alias","Physcomitrella patens","phosphatidic acid","protein_coding" "Pp1s2_123V6","No alias","Physcomitrella patens","tripeptidyl peptidase ii","protein_coding" "Pp1s2_476V6","No alias","Physcomitrella patens","phragmoplast-associated kinesin-related protein 1","protein_coding" "Pp1s302_28V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s311_17V6","No alias","Physcomitrella patens","set domain protein","protein_coding" "Pp1s31_216V6","No alias","Physcomitrella patens","thyroid hormone receptor-associated","protein_coding" "Pp1s332_24V6","No alias","Physcomitrella patens","contains ESTs C27886(C53356),AU100894(C53356) similar to Arabidopsis thaliana chromosome 3, T9J14.1 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding" "Pp1s343_49V6","No alias","Physcomitrella patens","K21G20.4; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s34_313V6","No alias","Physcomitrella patens","F2A19.80; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s34_370V6","No alias","Physcomitrella patens","snf2 domain-containing expressed","protein_coding" "Pp1s34_373V6","No alias","Physcomitrella patens","mikc* mads-box transcription factor","protein_coding" "Pp1s34_44V6","No alias","Physcomitrella patens","amino acid transporter, putative [Entamoeba histolytica HM-1:IMSS]","protein_coding" "Pp1s357_19V6","No alias","Physcomitrella patens","F7H2.12; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s35_152V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s371_2V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s3_614V6","No alias","Physcomitrella patens","chloroplast atp phosphoribosyl transferase","protein_coding" "Pp1s408_23V6","No alias","Physcomitrella patens","amp-binding protein","protein_coding" "Pp1s41_288V6","No alias","Physcomitrella patens","F25I24.180; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s42_84V6","No alias","Physcomitrella patens","F22C12.10; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s448_6V6","No alias","Physcomitrella patens","target of rapamycin","protein_coding" "Pp1s47_14V6","No alias","Physcomitrella patens","squamosa promoter-binding","protein_coding" "Pp1s4_280V6","No alias","Physcomitrella patens","F25I16.5; kelch repeat-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s50_26V6","No alias","Physcomitrella patens","hyoscyamine 6-","protein_coding" "Pp1s51_14V6","No alias","Physcomitrella patens","peptidase m16 family protein insulinase family protein","protein_coding" "Pp1s57_97V6","No alias","Physcomitrella patens","embryonic flower 2","protein_coding" "Pp1s58_115V6","No alias","Physcomitrella patens","phosphatidylinositol class v","protein_coding" "Pp1s58_150V6","No alias","Physcomitrella patens","glycosyltransferase family 58 protein","protein_coding" "Pp1s5_205V6","No alias","Physcomitrella patens","dynamin like protein","protein_coding" "Pp1s60_221V6","No alias","Physcomitrella patens","subfamily member 13","protein_coding" "Pp1s62_115V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s65_79V6","No alias","Physcomitrella patens","kinesin like protein","protein_coding" "Pp1s68_24V6","No alias","Physcomitrella patens","T20K14.220; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s70_208V6","No alias","Physcomitrella patens","MAC12.15; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s73_152V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s795_3V6","No alias","Physcomitrella patens","magnesium transporter","protein_coding" "Pp1s79_75V6","No alias","Physcomitrella patens","u2 snrnp auxiliary large subunit","protein_coding" "Pp1s7_51V6","No alias","Physcomitrella patens","phox domain-containing expressed","protein_coding" "Pp1s80_143V6","No alias","Physcomitrella patens","protein binding","protein_coding" "Pp1s80_71V6","No alias","Physcomitrella patens","mitogen-activated protein kinase","protein_coding" "Pp1s81_194V6","No alias","Physcomitrella patens","rna binding motif protein 25","protein_coding" "Pp1s84_220V6","No alias","Physcomitrella patens","esp4 (enhanced silencing phenotype 4) binding","protein_coding" "Pp1s88_58V6","No alias","Physcomitrella patens","aspartate kinase-homoserine dehydrogenase","protein_coding" "Pp1s91_24V6","No alias","Physcomitrella patens","phosphoenolpyruvate carboxylase","protein_coding" "Pp1s95_92V6","No alias","Physcomitrella patens","mtp6 gene for putative metal tolerance protein MTP6","protein_coding" "Pp1s96_127V6","No alias","Physcomitrella patens","esterase lipase thioesterase family protein","protein_coding" "Pp1s98_119V6","No alias","Physcomitrella patens","ring finger protein 123","protein_coding" "Pp1s99_42V6","No alias","Physcomitrella patens","chloroplast post-illumination chlorophyll fluorescence increase protein","protein_coding" "PSME_00000502-RA","No alias","Pseudotsuga menziesii","(q36814|psbd_wheat : 260.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Triticum aestivum (Wheat) & (atcg00270 : 259.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 518.0) & (original description: no original description)","protein_coding" "PSME_00002248-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 179.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 177.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 358.0) & (original description: no original description)","protein_coding" "PSME_00002841-RA","No alias","Pseudotsuga menziesii","(at4g13750 : 179.0) Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.; NO VEIN (NOV); FUNCTIONS IN: ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: no vein-like (TAIR:AT1G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description)","protein_coding" "PSME_00006424-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00006425-RA","No alias","Pseudotsuga menziesii","(at1g11880 : 145.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)","protein_coding" "PSME_00006429-RA","No alias","Pseudotsuga menziesii","(at1g11880 : 206.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)","protein_coding" "PSME_00007865-RA","No alias","Pseudotsuga menziesii","(p41640|psab_pinth : 787.0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB) (PSI-B) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00340 : 764.0) Encodes the D1 subunit of photosystem I and II reaction centers.; PSAB; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis, light harvesting in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I psaB (InterPro:IPR006244), Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00350.1). & (reliability: 1528.0) & (original description: no original description)","protein_coding" "PSME_00008634-RA","No alias","Pseudotsuga menziesii","(at3g20540 : 201.0) polymerase gamma 1 (POLGAMMA1); FUNCTIONS IN: 3'-5' exonuclease activity, DNA-directed DNA polymerase activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA polymerase A domain (InterPro:IPR002298), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: polymerase gamma 2 (TAIR:AT1G50840.1). & (reliability: 402.0) & (original description: no original description)","protein_coding" "PSME_00010241-RA","No alias","Pseudotsuga menziesii","(at1g78370 : 234.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink). & (q03666|gstx4_tobac : 231.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (reliability: 468.0) & (original description: no original description)","protein_coding" "PSME_00010462-RA","No alias","Pseudotsuga menziesii","(at3g04610 : 115.0) flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink). & (reliability: 216.0) & (original description: no original description)","protein_coding" "PSME_00012991-RA","No alias","Pseudotsuga menziesii","(p06404|psbd_marpo : 116.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Marchantia polymorpha (Liverwort) & (atcg00270 : 115.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 230.0) & (original description: no original description)","protein_coding" "PSME_00014087-RA","No alias","Pseudotsuga menziesii","(p41624|psbb_pinth : 592.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00680 : 550.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (reliability: 1100.0) & (original description: no original description)","protein_coding" "PSME_00014613-RA","No alias","Pseudotsuga menziesii","(at5g44635 : 679.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 135.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1358.0) & (original description: no original description)","protein_coding" "PSME_00014645-RA","No alias","Pseudotsuga menziesii","(p41621|rbl_pinth : 216.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00490 : 199.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (reliability: 398.0) & (original description: no original description)","protein_coding" "PSME_00015251-RA","No alias","Pseudotsuga menziesii","(at5g21990 : 129.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 3652 Blast hits to 3437 proteins in 299 species: Archae - 17; Bacteria - 74; Metazoa - 1859; Fungi - 377; Plants - 620; Viruses - 0; Other Eukaryotes - 705 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "PSME_00016662-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00016757-RA","No alias","Pseudotsuga menziesii","(p25698|ef1a_soybn : 238.0) Elongation factor 1-alpha (EF-1-alpha) - Glycine max (Soybean) & (at5g60390 : 232.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 464.0) & (original description: no original description)","protein_coding" "PSME_00016940-RA","No alias","Pseudotsuga menziesii","(at5g47690 : 149.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "PSME_00021600-RA","No alias","Pseudotsuga menziesii","(at5g05450 : 98.2) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)","protein_coding" "PSME_00021820-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00021857-RA","No alias","Pseudotsuga menziesii","(p69551|psba_pinth : 509.0) Photosystem Q(B) protein (32 kDa thylakoid membrane protein) (Photosystem II protein D1) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00020 : 470.0) Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core; photosystem II reaction center protein A (PSBA); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II reaction centre protein PsbA/D1 (InterPro:IPR005867), Photosynthetic reaction centre, L/M (InterPro:IPR000484); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein D (TAIR:ATCG00270.1). & (reliability: 940.0) & (original description: no original description)","protein_coding" "PSME_00023812-RA","No alias","Pseudotsuga menziesii","(p58386|psab_wheat : 347.0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB) (PSI-B) - Triticum aestivum (Wheat) & (atcg00340 : 346.0) Encodes the D1 subunit of photosystem I and II reaction centers.; PSAB; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis, light harvesting in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I psaB (InterPro:IPR006244), Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00350.1). & (reliability: 692.0) & (original description: no original description)","protein_coding" "PSME_00027796-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00029881-RA","No alias","Pseudotsuga menziesii","(at1g70320 : 120.0) encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 2 (UPL2); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, mitochondrion, ubiquitin ligase complex, nucleus; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.2); Has 34660 Blast hits to 19733 proteins in 1213 species: Archae - 286; Bacteria - 8191; Metazoa - 9374; Fungi - 5439; Plants - 1788; Viruses - 520; Other Eukaryotes - 9062 (source: NCBI BLink). & (q9sc88|gcp4_medtr : 94.7) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 240.0) & (original description: no original description)","protein_coding" "PSME_00033221-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00033895-RA","No alias","Pseudotsuga menziesii","(at3g27260 : 255.0) Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain; global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1). & (reliability: 510.0) & (original description: no original description)","protein_coding" "PSME_00034639-RA","No alias","Pseudotsuga menziesii","(at1g11880 : 110.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "PSME_00034991-RA","No alias","Pseudotsuga menziesii","(at3g58580 : 362.0) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G58560.1); Has 1306 Blast hits to 1271 proteins in 209 species: Archae - 0; Bacteria - 7; Metazoa - 532; Fungi - 229; Plants - 279; Viruses - 0; Other Eukaryotes - 259 (source: NCBI BLink). & (reliability: 724.0) & (original description: no original description)","protein_coding" "PSME_00036478-RA","No alias","Pseudotsuga menziesii","(at5g06050 : 249.0) Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "PSME_00039530-RA","No alias","Pseudotsuga menziesii","(at5g64410 : 676.0) oligopeptide transporter; oligopeptide transporter 4 (OPT4); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 2 (TAIR:AT1G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) & (original description: no original description)","protein_coding" "PSME_00040210-RA","No alias","Pseudotsuga menziesii","(at5g18190 : 404.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G03940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 808.0) & (original description: no original description)","protein_coding" "PSME_00046058-RA","No alias","Pseudotsuga menziesii","(at2g40600 : 186.0) appr-1-p processing enzyme family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT1G69340.1); Has 3775 Blast hits to 3643 proteins in 1376 species: Archae - 162; Bacteria - 2045; Metazoa - 672; Fungi - 129; Plants - 171; Viruses - 376; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 372.0) & (original description: no original description)","protein_coding" "PSME_00047484-RA","No alias","Pseudotsuga menziesii","(at1g30520 : 197.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (o24145|4cl1_tobac : 91.3) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 394.0) & (original description: no original description)","protein_coding" "PSME_00049214-RA","No alias","Pseudotsuga menziesii","(at5g06600 : 154.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)","protein_coding" "PSME_00049401-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00050743-RA","No alias","Pseudotsuga menziesii","(at2g02450 : 174.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (q52qh4|nac68_orysa : 142.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: no original description)","protein_coding" "PSME_00052688-RA","No alias","Pseudotsuga menziesii","(at3g53040 : 107.0) late embryogenesis abundant protein, putative / LEA protein, putative; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: embryonic cell protein 63 (TAIR:AT2G36640.1); Has 58153 Blast hits to 33178 proteins in 2866 species: Archae - 714; Bacteria - 20429; Metazoa - 14816; Fungi - 4800; Plants - 4772; Viruses - 420; Other Eukaryotes - 12202 (source: NCBI BLink). & (p20075|lead8_dauca : 105.0) Embryonic protein DC-8 - Daucus carota (Carrot) & (reliability: 214.0) & (original description: no original description)","protein_coding" "PSME_00052846-RA","No alias","Pseudotsuga menziesii","(at5g65730 : 142.0) xyloglucan endotransglucosylase/hydrolase 6 (XTH6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 7 (TAIR:AT4G37800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41542|xth_wheat : 102.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (reliability: 284.0) & (original description: no original description)","protein_coding" "PSME_00053850-RA","No alias","Pseudotsuga menziesii","(p10803|psbd_secce : 587.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Secale cereale (Rye) & (atcg00270 : 585.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 1170.0) & (original description: no original description)","protein_coding" "PSME_00055773-RA","No alias","Pseudotsuga menziesii","(at4g11470 : 80.1) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 31 (CRK31); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 32 (TAIR:AT4G11480.1); Has 120832 Blast hits to 119169 proteins in 4439 species: Archae - 88; Bacteria - 13747; Metazoa - 44536; Fungi - 10306; Plants - 33929; Viruses - 433; Other Eukaryotes - 17793 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)","protein_coding" "Seita.1G000400.1","No alias","Setaria italica ","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding" "Seita.1G002600.1","No alias","Setaria italica ","non-canonical component *(XLG) of heterotrimeric G-protein complex","protein_coding" "Seita.1G007400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G090800.1","No alias","Setaria italica ","L-arabinose kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.1G128400.1","No alias","Setaria italica ","LRR-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.1G150400.1","No alias","Setaria italica ","protein S-acyltransferase *(PAT12-14)","protein_coding" "Seita.1G210000.1","No alias","Setaria italica ","substrate adaptor of SCF E3 ubiquitin ligase *(SLY)","protein_coding" "Seita.1G215800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G216500.1","No alias","Setaria italica ","autophagosome cargo receptor protein *(NBR1)","protein_coding" "Seita.1G248200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G269600.1","No alias","Setaria italica ","regulatory protein *(ORM) of serine C-palmitoyltransferase activity","protein_coding" "Seita.2G000400.1","No alias","Setaria italica ","monosaccharide transporter *(STP)","protein_coding" "Seita.2G095000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G130200.1","No alias","Setaria italica ","alpha-1,4-mannosyltransferase *(PIG-M)","protein_coding" "Seita.2G158000.1","No alias","Setaria italica ","transcription factor *(D-GATA)","protein_coding" "Seita.2G167000.1","No alias","Setaria italica ","Golgi-ER retrograde trafficking cargo receptor *(ERV-B)","protein_coding" "Seita.2G177300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G192600.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding" "Seita.2G202800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G288400.1","No alias","Setaria italica ","regulatory protein *(XCT) of light-dependent circadian clock","protein_coding" "Seita.2G307000.1","No alias","Setaria italica ","component *(MED8) of head module of MEDIATOR transcription co-activator complex","protein_coding" "Seita.2G316000.1","No alias","Setaria italica ","beta-ureidopropionase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding" "Seita.2G320700.1","No alias","Setaria italica ","peptide","protein_coding" "Seita.2G361500.1","No alias","Setaria italica ","component *(WDR5/SWD3) of COMPASS histone trimethylation complex","protein_coding" "Seita.2G381100.1","No alias","Setaria italica ","class-II histone deacetylase","protein_coding" "Seita.2G415500.1","No alias","Setaria italica ","cellulose synthase CSC-interactive protein *(STELLO)","protein_coding" "Seita.2G420900.1","No alias","Setaria italica ","E3 ubiquitin ligase","protein_coding" "Seita.3G001400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G024600.1","No alias","Setaria italica ","amino acid transporter *(AAP)","protein_coding" "Seita.3G033700.1","No alias","Setaria italica ","NADPH","protein_coding" "Seita.3G100600.1","No alias","Setaria italica ","E4 polyubiquitination factor *(UAP)","protein_coding" "Seita.3G116500.1","No alias","Setaria italica ","component *(Pex14) of cargo-receptor docking complex","protein_coding" "Seita.3G123300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G149100.1","No alias","Setaria italica ","Golgin-type membrane tethering protein *(GC5/TMF)","protein_coding" "Seita.3G211700.1","No alias","Setaria italica ","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding" "Seita.3G230700.1","No alias","Setaria italica ","bZIP class-A transcription factor","protein_coding" "Seita.3G282100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G359400.1","No alias","Setaria italica ","mannosyltransferase-II *(PIG-V)","protein_coding" "Seita.4G002200.1","No alias","Setaria italica ","OPC-8","protein_coding" "Seita.4G027300.1","No alias","Setaria italica ","transcriptional co-activator *(BET/GTE)","protein_coding" "Seita.4G081900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G091800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G136900.1","No alias","Setaria italica ","lipopolysaccharide-binding protein *(LBR) involved in bacterial elicitor response","protein_coding" "Seita.4G168400.1","No alias","Setaria italica ","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding" "Seita.4G202900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G072000.1","No alias","Setaria italica ","component *(Pex14) of cargo-receptor docking complex","protein_coding" "Seita.5G074800.1","No alias","Setaria italica ","regulatory component *(DCP5) of mRNA decapping complex","protein_coding" "Seita.5G121500.1","No alias","Setaria italica ","alpha-1,3-mannosyltransferase *(ALG3) & EC_2.4 glycosyltransferase","protein_coding" "Seita.5G124000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G152900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G153900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G162800.1","No alias","Setaria italica ","clathrin uncoating protein *(AUL)","protein_coding" "Seita.5G198600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G207300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G380100.1","No alias","Setaria italica ","component *(TAF12) of SAGA transcription co-activator complex","protein_coding" "Seita.5G461700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G003200.1","No alias","Setaria italica ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.6G031100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G077300.1","No alias","Setaria italica ","component *(Arp3) of Arp2/3 actin polymerization initiation complex","protein_coding" "Seita.6G181200.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase & alpha-1,3-fucosyltransferase","protein_coding" "Seita.6G198600.1","No alias","Setaria italica ","WRKY-type transcription factor","protein_coding" "Seita.6G207700.1","No alias","Setaria italica ","AHL clade-B transcription factor","protein_coding" "Seita.7G138100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G199000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G224400.1","No alias","Setaria italica ","cold sensor *(COLD1) & plasma membrane-localized abscisic acid receptor *(GTG)","protein_coding" "Seita.7G236000.1","No alias","Setaria italica ","GABA pyruvate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding" "Seita.7G245600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G259800.1","No alias","Setaria italica ","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding" "Seita.7G262100.1","No alias","Setaria italica ","glycerol kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.7G282200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G334700.1","No alias","Setaria italica ","D-glucuronic acid kinase","protein_coding" "Seita.8G083800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G028500.1","No alias","Setaria italica ","RLCK-IV receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.9G040300.1","No alias","Setaria italica ","RING-H2-class BTL-subclass E3 ubiquitin ligase","protein_coding" "Seita.9G042500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G046600.1","No alias","Setaria italica ","translation elongation factor *(EF-P)","protein_coding" "Seita.9G056500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G057000.1","No alias","Setaria italica ","LRR-domain extensin","protein_coding" "Seita.9G064700.1","No alias","Setaria italica ","regulatory component *(ALIS) of phospholipid flippase complex & regulatory component *(ALIS) of ALA-ALIS flippase complex","protein_coding" "Seita.9G085200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G125200.1","No alias","Setaria italica ","LRR-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.9G200100.1","No alias","Setaria italica ","Golgi-ER retrograde trafficking cargo receptor *(ERV-A) & Golgi-ER retrograde trafficking cargo receptor *(ERV-B)","protein_coding" "Seita.9G230800.1","No alias","Setaria italica ","D-2-hydroxyglutarate synthas","protein_coding" "Seita.9G231600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G261800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G286800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G291700.1","No alias","Setaria italica ","regulatory protein *(VPS45) of vesicle trafficking","protein_coding" "Seita.9G302200.1","No alias","Setaria italica ","component *(DRD1) of DNA methylation accessory complex","protein_coding" "Seita.9G308600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G312800.1","No alias","Setaria italica ","3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1 hydrolase acting on ester bond","protein_coding" "Seita.9G374500.1","No alias","Setaria italica ","ethanolamine phosphate transferase *(PGAP5)","protein_coding" "Seita.9G459700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G468000.1","No alias","Setaria italica ","subunit a of V-type ATPase membrane V0 subcomplex","protein_coding" "Seita.9G490000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G491200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G501900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G542100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G573600.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.J001400.1","No alias","Setaria italica ","G-protein coupled receptor *(GPCR)","protein_coding" "Seita.J027500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Sobic.001G130100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G163400.1","No alias","Sorghum bicolor ","component *(SEC3) of Exocyst complex","protein_coding" "Sobic.001G231500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G304400.1","No alias","Sorghum bicolor ","component *(NDUFB8/ASHI) of NADH dehydrogenase beta subcomplex","protein_coding" "Sobic.001G308400.1","No alias","Sorghum bicolor ","EARP-specific component *(Syndetin-like) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding" "Sobic.001G346700.2","No alias","Sorghum bicolor ","ethanolamine phosphate transferase *(PGAP5)","protein_coding" "Sobic.001G355800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G413900.1","No alias","Sorghum bicolor ","P2A-type calcium cation-transporting ATPase *(ECA)","protein_coding" "Sobic.001G465300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G129000.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RIE1)","protein_coding" "Sobic.002G131400.1","No alias","Sorghum bicolor ","alpha-1,4-mannosyltransferase *(PIG-M)","protein_coding" "Sobic.002G166900.1","No alias","Sorghum bicolor ","E2 ubiquitin-conjugating enzyme","protein_coding" "Sobic.002G199400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G344000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G354700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G429300.1","No alias","Sorghum bicolor ","nucleocytoplasmic import karyopherin *(KA120)","protein_coding" "Sobic.003G005900.1","No alias","Sorghum bicolor ","regulatory protein *(KOBITO) of cellulose-hemicellulose network assembly","protein_coding" "Sobic.003G013000.1","No alias","Sorghum bicolor ","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.003G015900.1","No alias","Sorghum bicolor ","component *(CWC15) of MAC spliceosome-associated complex","protein_coding" "Sobic.003G050900.1","No alias","Sorghum bicolor ","alpha-1,3-mannosyltransferase *(ALG3) & EC_2.4 glycosyltransferase","protein_coding" "Sobic.003G105101.1","No alias","Sorghum bicolor ","scaffold protein ISCA1 of mitochondrial ISC system transfer phase","protein_coding" "Sobic.003G152900.1","No alias","Sorghum bicolor ","dihydrolipoamide dehydrogenase component of 2-oxoglutarate dehydrogenase complex & dihydrolipoamide dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex & dihydrolipoyl dehydrogenase component *(L-protein) of glycine cleavage system & dihydrolipoamide dehydrogenase component of mitochondrial pyruvate dehydrogenase complex & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding" "Sobic.003G167000.1","No alias","Sorghum bicolor ","clade H phosphatase","protein_coding" "Sobic.003G169600.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding" "Sobic.003G181700.1","No alias","Sorghum bicolor ","mannosyltransferase-II *(PIG-V)","protein_coding" "Sobic.003G187500.1","No alias","Sorghum bicolor ","auxiliary factor of DNA methylation pathway *(MORC)","protein_coding" "Sobic.003G188500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G220700.1","No alias","Sorghum bicolor ","regulatory protein of RNA homeostasis","protein_coding" "Sobic.003G289400.1","No alias","Sorghum bicolor ","subunit beta of type-I protein prenyltransferase complex & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Sobic.003G316200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G363000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G401000.1","No alias","Sorghum bicolor ","large subunit epsilon of AP-4 vacuole cargo adaptor complex","protein_coding" "Sobic.004G006900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G030000.1","No alias","Sorghum bicolor ","component *(24kDa/FAd) of ATP synthase membrane MF0 subcomplex","protein_coding" "Sobic.004G033600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G135400.1","No alias","Sorghum bicolor ","component *(AUG6) of Augmin gamma-TuRC recruiting complex","protein_coding" "Sobic.004G167600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G204100.1","No alias","Sorghum bicolor ","vesicle trafficking tethering factor *(TNO1)","protein_coding" "Sobic.004G268300.1","No alias","Sorghum bicolor ","phosphatidate phosphatase *(LPP-epsilon)","protein_coding" "Sobic.004G270200.1","No alias","Sorghum bicolor ","RCK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.004G314000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G322400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G353200.1","No alias","Sorghum bicolor ","regulatory component *(RPN5) of 26S proteasome","protein_coding" "Sobic.004G355000.1","No alias","Sorghum bicolor ","group-SAC-III phosphoinositide phosphatase","protein_coding" "Sobic.005G020900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.005G062200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.005G096400.1","No alias","Sorghum bicolor ","DLSV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.006G054500.1","No alias","Sorghum bicolor ","MUB ubiquitin-fold protein","protein_coding" "Sobic.006G129700.1","No alias","Sorghum bicolor ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding" "Sobic.006G138600.1","No alias","Sorghum bicolor ","alpha-1,2 glucosyltransferase *(ALG10)","protein_coding" "Sobic.006G201800.1","No alias","Sorghum bicolor ","phospholipid scramblase","protein_coding" "Sobic.006G232800.1","No alias","Sorghum bicolor ","component *(Mic60) of MICOS complex","protein_coding" "Sobic.007G002500.1","No alias","Sorghum bicolor ","TUB-type transcription factor","protein_coding" "Sobic.007G061400.1","No alias","Sorghum bicolor ","component *(Pam18) of inner mitochondrion membrane TIM translocation system","protein_coding" "Sobic.007G168600.4","No alias","Sorghum bicolor ","R-type VAMP7-group component of SNARE longin membrane fusion complex","protein_coding" "Sobic.008G021400.1","No alias","Sorghum bicolor ","DLSV protein kinase & H-type thioredoxin *(Trx-H) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.008G034600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G058700.1","No alias","Sorghum bicolor ","metal cation transporter *(ZIP13)","protein_coding" "Sobic.008G058800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G104200.1","No alias","Sorghum bicolor ","deaminated-glutathione amidase","protein_coding" "Sobic.008G125000.1","No alias","Sorghum bicolor ","large subunit delta of AP-3 Golgi to vacuole cargo adaptor complex","protein_coding" "Sobic.008G126700.1","No alias","Sorghum bicolor ","regulatory protein *(CBP60) of systemic acquired resistance","protein_coding" "Sobic.008G173000.1","No alias","Sorghum bicolor ","subunit beta of E1 subcomplex of pyruvate dehydrogenase complex","protein_coding" "Sobic.009G033100.2","No alias","Sorghum bicolor ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.009G164700.1","No alias","Sorghum bicolor ","E-class RAB GTPase","protein_coding" "Sobic.009G168000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G180000.1","No alias","Sorghum bicolor ","calcium sensor *(CML) & calcium sensor *(CaM)","protein_coding" "Sobic.009G219000.1","No alias","Sorghum bicolor ","clathrin coated vesicle adaptor protein *(ECA1/2)","protein_coding" "Sobic.010G012500.1","No alias","Sorghum bicolor ","component *(Cox-X2) of cytochrome c oxidase complex","protein_coding" "Sobic.010G100432.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.010G138200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.010G188100.1","No alias","Sorghum bicolor ","component *(VPS32/SNF7) of ESCRT-III complex","protein_coding" "Sobic.010G204400.1","No alias","Sorghum bicolor ","RAB5 canonical effector *(EREX)","protein_coding" "Sobic.010G235200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Solyc01g006000","No alias","Solanum lycopersicum","GPI mannosyltransferase 2 (AHRD V3.3 *** W9S353_9ROSA)","protein_coding" "Solyc01g008320","No alias","Solanum lycopersicum","shoot gravitropism 2 (SGR2) (AHRD V3.3 *** AT1G31480.1)","protein_coding" "Solyc01g066740","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT3G06880.2)","protein_coding" "Solyc01g095170","No alias","Solanum lycopersicum","LOW QUALITY:cell wall protein SlTFR88","protein_coding" "Solyc01g099650","No alias","Solanum lycopersicum","Formin-like protein (AHRD V3.3 *** K4B0Z9_SOLLC)","protein_coding" "Solyc01g111220","No alias","Solanum lycopersicum","Amidase family protein (AHRD V3.3 *** B9H162_POPTR)","protein_coding" "Solyc01g111770","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc02g070610","No alias","Solanum lycopersicum","Protein glycosylationmyb-like TTH transcriptional regulator (AHRD V3.3 *** A0A077SKU6_9MAGN)","protein_coding" "Solyc02g079920","No alias","Solanum lycopersicum","C2H2-like zinc finger protein (AHRD V3.3 *** G7JF39_MEDTR)","protein_coding" "Solyc02g093320","No alias","Solanum lycopersicum","DNA binding protein (AHRD V3.3 --* AT3G21430.4)","protein_coding" "Solyc03g019760","No alias","Solanum lycopersicum","ABC transporter G family member (AHRD V3.3 *** A0A0K9NYG1_ZOSMR)","protein_coding" "Solyc03g045120","No alias","Solanum lycopersicum","jacalin-related lectin 22 (AHRD V3.3 --* AT2G39310.4)","protein_coding" "Solyc03g113070","No alias","Solanum lycopersicum","ABC transporter A family protein (AHRD V3.3 *** A0A072UVK2_MEDTR)","protein_coding" "Solyc04g008660","No alias","Solanum lycopersicum","ADP-ribosylation factor GTPase-activating protein (AHRD V3.3 *-* G5DWI4_SILLA)","protein_coding" "Solyc04g015400","No alias","Solanum lycopersicum","GDSL esterase/lipase EXL3, putative (AHRD V3.3 *** A0A061GMX5_THECC)","protein_coding" "Solyc04g015830","No alias","Solanum lycopersicum","villin 2 (AHRD V3.3 *** AT2G41740.2)","protein_coding" "Solyc04g074080","No alias","Solanum lycopersicum","DEAD box RNA helicase 1 (AHRD V3.3 --* AT3G01540.4)","protein_coding" "Solyc04g074940","No alias","Solanum lycopersicum","Target SNARE coiled-coil domain-containing protein (AHRD V3.3 *** A0A103XBX5_CYNCS)","protein_coding" "Solyc04g076120","No alias","Solanum lycopersicum","Serine carboxypeptidase, putative (AHRD V3.3 *-* B9R6Y4_RICCO)","protein_coding" "Solyc06g008710","No alias","Solanum lycopersicum","Cullin 1 (AHRD V3.3 *** A0A0D4D5H0_SOLLC)","protein_coding" "Solyc06g036080","No alias","Solanum lycopersicum","MAP kinase kinase kinase 37","protein_coding" "Solyc06g049070","No alias","Solanum lycopersicum","Nucleotide/sugar transporter family protein (AHRD V3.3 *** AT2G30460.2)","protein_coding" "Solyc07g062580","No alias","Solanum lycopersicum","TPR repeat thioredoxin TTL1-like protein (AHRD V3.3 *** A0A072V9X4_MEDTR)","protein_coding" "Solyc08g067920","No alias","Solanum lycopersicum","Enhancer of polycomb-like transcription factor protein, putative isoform 1 (AHRD V3.3 *** A0A061GQB3_THECC)","protein_coding" "Solyc08g081840","No alias","Solanum lycopersicum","BTB/POZ domain-containing POB1-like protein (AHRD V3.3 *** A0A0B0N127_GOSAR)","protein_coding" "Solyc08g082270","No alias","Solanum lycopersicum","Leucine-rich repeat (LRR) family protein (AHRD V3.3 *** AT4G23840.1)","protein_coding" "Solyc09g005460","No alias","Solanum lycopersicum","3-phosphoshikimate 1-carboxyvinyltransferase (AHRD V3.3 *-* G1FBT6_CAPAN)","protein_coding" "Solyc09g014450","No alias","Solanum lycopersicum","Clathrin light chain protein (AHRD V3.3 *** AT2G40060.1)","protein_coding" "Solyc09g089640","No alias","Solanum lycopersicum","LOW QUALITY:Plant/T32M21-140 protein (AHRD V3.3 *** A0A072VGG8_MEDTR)","protein_coding" "Solyc09g098270","No alias","Solanum lycopersicum","Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G23460.1)","protein_coding" "Solyc10g006200","No alias","Solanum lycopersicum","Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A061F5X1_THECC)","protein_coding" "Solyc10g006790","No alias","Solanum lycopersicum","mitogen-activated protein kinase 16 (AHRD V3.3 --* AT5G19010.1)","protein_coding" "Solyc10g084210","No alias","Solanum lycopersicum","Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO)","protein_coding" "Solyc11g030550","No alias","Solanum lycopersicum","Cyclin family protein (AHRD V3.3 *-* AT5G06150.2)","protein_coding" "Solyc11g071270","No alias","Solanum lycopersicum","ENTH/VHS/GAT family protein (AHRD V3.3 *** A0A061GKP2_THECC)","protein_coding" "Solyc12g008410","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc12g008420","No alias","Solanum lycopersicum","RNA-dependent RNA polymerase (AHRD V3.3 *** K4DBS9_SOLLC)","protein_coding" "Solyc12g055880","No alias","Solanum lycopersicum","Pyruvate dehydrogenase E1 component subunit alpha (AHRD V3.3 --* I3T9D4_MEDTR)","protein_coding" "Sopen01g002010","No alias","Solanum pennellii","Mannosyltransferase (PIG-V))","protein_coding" "Sopen09g029720","No alias","Solanum pennellii","ALG3 protein","protein_coding"