"sequence_id","alias","species","description","type"
"100454","No alias","Selaginella moellendorffii ","RNA-binding protein 47C\'","protein_coding"
"101296","No alias","Selaginella moellendorffii ","nucleotide transporter 1","protein_coding"
"102611","No alias","Selaginella moellendorffii ","RNA-metabolising metallo-beta-lactamase family protein","protein_coding"
"106218","No alias","Selaginella moellendorffii ","isoamylase 3","protein_coding"
"10677","No alias","Selaginella moellendorffii ","DEAD box RNA helicase (RH3)","protein_coding"
"107247","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"107444","No alias","Selaginella moellendorffii ","RNA-binding KH domain-containing protein","protein_coding"
"110000","No alias","Selaginella moellendorffii ","Rubisco methyltransferase family protein","protein_coding"
"110614","No alias","Selaginella moellendorffii ","histone deacetylase 5","protein_coding"
"112145","No alias","Selaginella moellendorffii ","Alternative oxidase family protein","protein_coding"
"113024","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"113089","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"116019","No alias","Selaginella moellendorffii ","nucleotide transporter 1","protein_coding"
"118724","No alias","Selaginella moellendorffii ","Thioredoxin family protein","protein_coding"
"120890","No alias","Selaginella moellendorffii ","thiaminC","protein_coding"
"128521","No alias","Selaginella moellendorffii ","ATP synthase protein I -related","protein_coding"
"128787","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"12954","No alias","Selaginella moellendorffii ","63 kDa inner membrane family protein","protein_coding"
"133504","No alias","Selaginella moellendorffii ","O-fucosyltransferase family protein","protein_coding"
"140819","No alias","Selaginella moellendorffii ","glycine-rich RNA-binding protein 4","protein_coding"
"141109","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"143272","No alias","Selaginella moellendorffii ","Cysteine proteinases superfamily protein","protein_coding"
"150329","No alias","Selaginella moellendorffii ","Subtilisin-like serine endopeptidase family protein","protein_coding"
"152047","No alias","Selaginella moellendorffii ","presequence protease 1","protein_coding"
"152730","No alias","Selaginella moellendorffii ","thiaminC","protein_coding"
"152929","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"158820","No alias","Selaginella moellendorffii ","RAB GTPase homolog A1F","protein_coding"
"159064","No alias","Selaginella moellendorffii ","DnaJ/Hsp40 cysteine-rich domain superfamily protein","protein_coding"
"160613","No alias","Selaginella moellendorffii ","adenosine kinase","protein_coding"
"163805","No alias","Selaginella moellendorffii ","prohibitin 3","protein_coding"
"16556","No alias","Selaginella moellendorffii ","NFU domain protein 1","protein_coding"
"165641","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"166787","No alias","Selaginella moellendorffii ","peptidoglycan-binding LysM domain-containing protein","protein_coding"
"167572","No alias","Selaginella moellendorffii ","APS reductase 3","protein_coding"
"168153","No alias","Selaginella moellendorffii ","chaperonin 60 beta","protein_coding"
"170457","No alias","Selaginella moellendorffii ","RNA methyltransferase family protein","protein_coding"
"174583","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"177641","No alias","Selaginella moellendorffii ","Haem oxygenase-like, multi-helical","protein_coding"
"178515","No alias","Selaginella moellendorffii ","peptide met sulfoxide reductase 4","protein_coding"
"180460","No alias","Selaginella moellendorffii ","elongation factor family protein","protein_coding"
"184206","No alias","Selaginella moellendorffii ","Glycosyl transferase, family 35","protein_coding"
"229229","No alias","Selaginella moellendorffii ","cyclophilin 20-2","protein_coding"
"231325","No alias","Selaginella moellendorffii ","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding"
"234662","No alias","Selaginella moellendorffii ","Phosphofructokinase family protein","protein_coding"
"235490","No alias","Selaginella moellendorffii ","Fatty acid/sphingolipid desaturase","protein_coding"
"25552","No alias","Selaginella moellendorffii ","chloroplast RNA-binding protein 29","protein_coding"
"267315","No alias","Selaginella moellendorffii ","cytosolic NADP+-dependent isocitrate dehydrogenase","protein_coding"
"267596","No alias","Selaginella moellendorffii ","AAA-type ATPase family protein","protein_coding"
"270747","No alias","Selaginella moellendorffii ","cytidinediphosphate diacylglycerol synthase 4","protein_coding"
"271002","No alias","Selaginella moellendorffii ","thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)","protein_coding"
"402993","No alias","Selaginella moellendorffii ","germin-like protein 10","protein_coding"
"404341","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405512","No alias","Selaginella moellendorffii ","Cobalamin biosynthesis CobW-like protein","protein_coding"
"405784","No alias","Selaginella moellendorffii ","DNA GYRASE B2","protein_coding"
"405999","No alias","Selaginella moellendorffii ","chromatin assembly factor-1 (FASCIATA1) (FAS1)","protein_coding"
"406591","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406852","No alias","Selaginella moellendorffii ","Rubisco methyltransferase family protein","protein_coding"
"407040","No alias","Selaginella moellendorffii ","Trypsin family protein with PDZ domain","protein_coding"
"407350","No alias","Selaginella moellendorffii ","subtilase family protein","protein_coding"
"407570","No alias","Selaginella moellendorffii ","MUTS homolog 2","protein_coding"
"407915","No alias","Selaginella moellendorffii ","Uncharacterized conserved protein (DUF2215)","protein_coding"
"410377","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"410507","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415317","No alias","Selaginella moellendorffii ","Leucine-rich repeat protein kinase family protein","protein_coding"
"418465","No alias","Selaginella moellendorffii ","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"421285","No alias","Selaginella moellendorffii ","Thioredoxin superfamily protein","protein_coding"
"422148","No alias","Selaginella moellendorffii ","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding"
"422692","No alias","Selaginella moellendorffii ","cytochrome P450, family 716, subfamily A, polypeptide 1","protein_coding"
"422763","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423216","No alias","Selaginella moellendorffii ","NDH-dependent cyclic electron flow 5","protein_coding"
"423863","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424841","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"431583","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437639","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437743","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"438843","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"439181","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"440629","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"441564","No alias","Selaginella moellendorffii ","alpha-crystallin domain 32.1","protein_coding"
"441792","No alias","Selaginella moellendorffii ","phosphoglycerate/bisphosphoglycerate mutase family protein","protein_coding"
"441971","No alias","Selaginella moellendorffii ","GLU-ADT subunit B","protein_coding"
"442872","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"443419","No alias","Selaginella moellendorffii ","appr-1-p processing enzyme family protein","protein_coding"
"443467","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"444139","No alias","Selaginella moellendorffii ","CCR-like","protein_coding"
"444977","No alias","Selaginella moellendorffii ","calcium-dependent lipid-binding family protein","protein_coding"
"445274","No alias","Selaginella moellendorffii ","rotamase FKBP 1","protein_coding"
"446090","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"446313","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"448001","No alias","Selaginella moellendorffii ","cold regulated gene 27","protein_coding"
"46894","No alias","Selaginella moellendorffii ","calcium-binding EF hand family protein","protein_coding"
"54771","No alias","Selaginella moellendorffii ","nudix hydrolase homolog 19","protein_coding"
"5816","No alias","Selaginella moellendorffii ","zinc knuckle (CCHC-type) family protein","protein_coding"
"60423","No alias","Selaginella moellendorffii ","multimeric translocon complex in the outer envelope membrane 132","protein_coding"
"67262","No alias","Selaginella moellendorffii ","chloroplastic drought-induced stress protein of 32 kD","protein_coding"
"68901","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"74970","No alias","Selaginella moellendorffii ","nucleosome assembly protein1;1","protein_coding"
"75621","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"77276","No alias","Selaginella moellendorffii ","DEAD/DEAH box helicase, putative","protein_coding"
"77583","No alias","Selaginella moellendorffii ","MUTL protein homolog 1","protein_coding"
"78627","No alias","Selaginella moellendorffii ","SET domain protein 25","protein_coding"
"81478","No alias","Selaginella moellendorffii ","Cystathionine beta-synthase (CBS) family protein","protein_coding"
"84597","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1350)","protein_coding"
"84784","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding"
"85910","No alias","Selaginella moellendorffii ","DNA/RNA polymerases superfamily protein","protein_coding"
"88538","No alias","Selaginella moellendorffii ","Chaperone protein htpG family protein","protein_coding"
"9124","No alias","Selaginella moellendorffii ","Heavy metal transport/detoxification superfamily protein","protein_coding"
"92276","No alias","Selaginella moellendorffii ","heavy metal atpase 5","protein_coding"
"92364","No alias","Selaginella moellendorffii ","Remorin family protein","protein_coding"
"95815","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"96554","No alias","Selaginella moellendorffii ","CTP synthase family protein","protein_coding"
"98474","No alias","Selaginella moellendorffii ","methionine sulfoxide reductase B 2","protein_coding"
"99603","No alias","Selaginella moellendorffii ","putative mitochondrial RNA helicase 2","protein_coding"
"A4A49_07879","No alias","Nicotiana attenuata","plastidic atpadp-transporter","protein_coding"
"A4A49_08673","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_16523","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_60304","No alias","Nicotiana attenuata","plastidic atpadp-transporter","protein_coding"
"AC191069.3_FG004","No alias","Zea mays","Function unknown","protein_coding"
"AC191251.3_FG005","No alias","Zea mays","Cell differentiation, Rcd1-like protein","protein_coding"
"AC217358.3_FG005","No alias","Zea mays","prohibitin 2","protein_coding"
"At1g01290","No alias","Arabidopsis thaliana","Cyclic pyranopterin monophosphate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39056]","protein_coding"
"At1g03687","No alias","Arabidopsis thaliana","DTW domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I2G3]","protein_coding"
"At1g05410","No alias","Arabidopsis thaliana","At1g05410/T25N20_5 [Source:UniProtKB/TrEMBL;Acc:Q8VZE5]","protein_coding"
"At1g08110","No alias","Arabidopsis thaliana","Lactoylglutathione lyase [Source:UniProtKB/TrEMBL;Acc:B9DH52]","protein_coding"
"At1g10390","No alias","Arabidopsis thaliana","Nuclear pore complex protein NUP98A [Source:UniProtKB/Swiss-Prot;Acc:Q8RY25]","protein_coding"
"At1g10700","No alias","Arabidopsis thaliana","Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]","protein_coding"
"At1g11520","No alias","Arabidopsis thaliana","Pliceosome associated protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPY3]","protein_coding"
"At1g15500","No alias","Arabidopsis thaliana","ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A178WDN7]","protein_coding"
"At1g15910","No alias","Arabidopsis thaliana","IDP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T4]","protein_coding"
"At1g18010","No alias","Arabidopsis thaliana","UNC93-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q56WD3]","protein_coding"
"At1g21790","No alias","Arabidopsis thaliana","F8K7.23 [Source:UniProtKB/TrEMBL;Acc:Q9XHZ7]","protein_coding"
"At1g22700","No alias","Arabidopsis thaliana","Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DHG0]","protein_coding"
"At1g27540","No alias","Arabidopsis thaliana","F-box protein (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9SXC7]","protein_coding"
"At1g29060","No alias","Arabidopsis thaliana","Bet1-like protein At1g29060 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9S0]","protein_coding"
"At1g32200","No alias","Arabidopsis thaliana","Glycerol-3-phosphate acyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q43307]","protein_coding"
"At1g42960","No alias","Arabidopsis thaliana","Inner membrane localized protein [Source:UniProtKB/TrEMBL;Acc:Q9C7S3]","protein_coding"
"At1g48450","No alias","Arabidopsis thaliana","Alanine-tRNA ligase, putative (DUF760) [Source:UniProtKB/TrEMBL;Acc:Q9LP80]","protein_coding"
"At1g50900","No alias","Arabidopsis thaliana","Protein LHCP TRANSLOCATION DEFECT [Source:UniProtKB/Swiss-Prot;Acc:Q8VY88]","protein_coding"
"At1g52510","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ57]","protein_coding"
"At1g62630","No alias","Arabidopsis thaliana","Probable disease resistance protein At1g62630 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI85]","protein_coding"
"At1g71900","No alias","Arabidopsis thaliana","Protein of unknown function (DUF803) [Source:TAIR;Acc:AT1G71900]","protein_coding"
"At1g74960","No alias","Arabidopsis thaliana","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9P4]","protein_coding"
"At1g78300","No alias","Arabidopsis thaliana","14-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]","protein_coding"
"At1g80300","No alias","Arabidopsis thaliana","ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]","protein_coding"
"At2g01110","No alias","Arabidopsis thaliana","UNE3 [Source:UniProtKB/TrEMBL;Acc:A0A178VUB7]","protein_coding"
"At2g01220","No alias","Arabidopsis thaliana","Nucleotidylyl transferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L845]","protein_coding"
"At2g10940","No alias","Arabidopsis thaliana","At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]","protein_coding"
"At2g17420","No alias","Arabidopsis thaliana","Thioredoxin reductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39242]","protein_coding"
"At2g17540","No alias","Arabidopsis thaliana","Uncharacterized protein At2g17540 [Source:UniProtKB/TrEMBL;Acc:Q9SHL4]","protein_coding"
"At2g19940","No alias","Arabidopsis thaliana","oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding [Source:TAIR;Acc:AT2G19940]","protein_coding"
"At2g20230","No alias","Arabidopsis thaliana","Tetraspanin-18 [Source:UniProtKB/Swiss-Prot;Acc:Q93XY5]","protein_coding"
"At2g20990","No alias","Arabidopsis thaliana","Synaptotagmin A [Source:UniProtKB/TrEMBL;Acc:F4IFM6]","protein_coding"
"At2g21170","No alias","Arabidopsis thaliana","TIM [Source:UniProtKB/TrEMBL;Acc:A0A178VN28]","protein_coding"
"At2g21600","No alias","Arabidopsis thaliana","Protein RER1B [Source:UniProtKB/Swiss-Prot;Acc:O48671]","protein_coding"
"At2g22040","No alias","Arabidopsis thaliana","Non-functional target of rapamycin complex subunit LST8-2 [Source:UniProtKB/Swiss-Prot;Acc:F4IIK6]","protein_coding"
"At2g24090","No alias","Arabidopsis thaliana","50S ribosomal protein L35, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ55]","protein_coding"
"At2g26670","No alias","Arabidopsis thaliana","TED4 [Source:UniProtKB/TrEMBL;Acc:A0A178VP48]","protein_coding"
"At2g27100","No alias","Arabidopsis thaliana","SE [Source:UniProtKB/TrEMBL;Acc:A0A178VZD4]","protein_coding"
"At2g27130","No alias","Arabidopsis thaliana","Xylogen-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVC7]","protein_coding"
"At2g27860","No alias","Arabidopsis thaliana","UDP-D-apiose/UDP-D-xylose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUY6]","protein_coding"
"At2g34160","No alias","Arabidopsis thaliana","Uncharacterized protein At2g34160 [Source:UniProtKB/Swiss-Prot;Acc:O22969]","protein_coding"
"At2g34860","No alias","Arabidopsis thaliana","Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64750]","protein_coding"
"At2g35450","No alias","Arabidopsis thaliana","Catalytic/ hydrolase [Source:UniProtKB/TrEMBL;Acc:Q682E0]","protein_coding"
"At2g35470","No alias","Arabidopsis thaliana","At2g35470 [Source:UniProtKB/TrEMBL;Acc:O82293]","protein_coding"
"At2g35960","No alias","Arabidopsis thaliana","NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]","protein_coding"
"At2g43560","No alias","Arabidopsis thaliana","Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]","protein_coding"
"At2g45810","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94BV4]","protein_coding"
"At3g05020","No alias","Arabidopsis thaliana","Acyl carrier protein [Source:UniProtKB/TrEMBL;Acc:Q0WT41]","protein_coding"
"At3g05100","No alias","Arabidopsis thaliana","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9MAA9]","protein_coding"
"At3g06240","No alias","Arabidopsis thaliana","F-box/kelch-repeat protein At3g06240 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXC7]","protein_coding"
"At3g06650","No alias","Arabidopsis thaliana","ACLB-1 [Source:UniProtKB/TrEMBL;Acc:A0A178V742]","protein_coding"
"At3g09100","No alias","Arabidopsis thaliana","mRNA capping enzyme family protein [Source:UniProtKB/TrEMBL;Acc:F4IYM6]","protein_coding"
"At3g19290","No alias","Arabidopsis thaliana","ABRE binding factor 4 [Source:UniProtKB/TrEMBL;Acc:F4JB53]","protein_coding"
"At3g19820","No alias","Arabidopsis thaliana","Delta(24)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39085]","protein_coding"
"At3g20820","No alias","Arabidopsis thaliana","Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LT39]","protein_coding"
"At3g21055","No alias","Arabidopsis thaliana","Photosystem II subunit T [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS90]","protein_coding"
"At3g23450","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LW52]","protein_coding"
"At3g24040","No alias","Arabidopsis thaliana","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LIQ3]","protein_coding"
"At3g24160","No alias","Arabidopsis thaliana","PMP [Source:UniProtKB/TrEMBL;Acc:A0A178VAP7]","protein_coding"
"At3g27160","No alias","Arabidopsis thaliana","Ribosomal protein S21 family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRJ3]","protein_coding"
"At3g55000","No alias","Arabidopsis thaliana","Protein TONNEAU 1a [Source:UniProtKB/Swiss-Prot;Acc:Q9FQ25]","protein_coding"
"At3g55005","No alias","Arabidopsis thaliana","Protein TONNEAU 1b [Source:UniProtKB/Swiss-Prot;Acc:Q9FQ24]","protein_coding"
"At3g60590","No alias","Arabidopsis thaliana","Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:F4JBW0]","protein_coding"
"At3g61870","No alias","Arabidopsis thaliana","AT3g61870/F21F14_40 [Source:UniProtKB/TrEMBL;Acc:Q9M277]","protein_coding"
"At4g00400","No alias","Arabidopsis thaliana","Probable glycerol-3-phosphate acyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF03]","protein_coding"
"At4g04770","No alias","Arabidopsis thaliana","UPF0051 protein ABCI8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZS97]","protein_coding"
"At4g09580","No alias","Arabidopsis thaliana","Uncharacterized membrane protein At4g09580 [Source:UniProtKB/Swiss-Prot;Acc:Q8L586]","protein_coding"
"At4g12110","No alias","Arabidopsis thaliana","SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]","protein_coding"
"At4g14890","No alias","Arabidopsis thaliana","Ferredoxin C 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23344]","protein_coding"
"At4g15030","No alias","Arabidopsis thaliana","Folate-sensitive fragile site protein [Source:UniProtKB/TrEMBL;Acc:F4JJC3]","protein_coding"
"At4g18210","No alias","Arabidopsis thaliana","Probable purine permease 10 [Source:UniProtKB/Swiss-Prot;Acc:O49725]","protein_coding"
"At4g22140","No alias","Arabidopsis thaliana","Chromatin remodeling protein EBS [Source:UniProtKB/Swiss-Prot;Acc:F4JL28]","protein_coding"
"At4g25670","No alias","Arabidopsis thaliana","AT4g25670/L73G19_50 [Source:UniProtKB/TrEMBL;Acc:Q94BX3]","protein_coding"
"At4g25680","No alias","Arabidopsis thaliana","At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]","protein_coding"
"At4g28860","No alias","Arabidopsis thaliana","Casein kinase 1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPI7]","protein_coding"
"At4g29030","No alias","Arabidopsis thaliana","Glycine-rich protein like [Source:UniProtKB/TrEMBL;Acc:Q9SZD3]","protein_coding"
"At4g30580","No alias","Arabidopsis thaliana","1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GXU8]","protein_coding"
"At4g32410","No alias","Arabidopsis thaliana","Cellulose synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UWT4]","protein_coding"
"At4g33410","No alias","Arabidopsis thaliana","Signal peptide peptidase-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z32]","protein_coding"
"At4g34960","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]","protein_coding"
"At4g36800","No alias","Arabidopsis thaliana","NEDD8-conjugating enzyme Ubc12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDY5]","protein_coding"
"At5g04550","No alias","Arabidopsis thaliana","AT5g04550/T32M21_140 [Source:UniProtKB/TrEMBL;Acc:Q9LZ71]","protein_coding"
"At5g04600","No alias","Arabidopsis thaliana","AT5g04600/T32M21_200 [Source:UniProtKB/TrEMBL;Acc:Q9LZ65]","protein_coding"
"At5g11420","No alias","Arabidopsis thaliana","Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]","protein_coding"
"At5g12860","No alias","Arabidopsis thaliana","Dicarboxylate transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV3]","protein_coding"
"At5g18520","No alias","Arabidopsis thaliana","Lung seven transmembrane receptor family protein [Source:UniProtKB/TrEMBL;Acc:F4JY11]","protein_coding"
"At5g20300","No alias","Arabidopsis thaliana","Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]","protein_coding"
"At5g23940","No alias","Arabidopsis thaliana","BAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]","protein_coding"
"At5g28060","No alias","Arabidopsis thaliana","40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]","protein_coding"
"At5g35100","No alias","Arabidopsis thaliana","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Source:TAIR;Acc:AT5G35100]","protein_coding"
"At5g42240","No alias","Arabidopsis thaliana","Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]","protein_coding"
"At5g44250","No alias","Arabidopsis thaliana","At5g44250 [Source:UniProtKB/TrEMBL;Acc:Q9FFG7]","protein_coding"
"At5g50020","No alias","Arabidopsis thaliana","DHHC-type zinc finger family protein [Source:TAIR;Acc:AT5G50020]","protein_coding"
"At5g51010","No alias","Arabidopsis thaliana","Rubredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FI47]","protein_coding"
"At5g52370","No alias","Arabidopsis thaliana","28S ribosomal S34 protein [Source:UniProtKB/TrEMBL;Acc:Q9FHC3]","protein_coding"
"At5g57710","No alias","Arabidopsis thaliana","Protein SUPPRESSOR OF MAX2 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHH2]","protein_coding"
"At5g58060","No alias","Arabidopsis thaliana","SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KDI1]","protein_coding"
"At5g59290","No alias","Arabidopsis thaliana","UDP-glucuronic acid decarboxylase 3 [Source:UniProtKB/TrEMBL;Acc:F4KHU8]","protein_coding"
"At5g64090","No alias","Arabidopsis thaliana","At5g64090 [Source:UniProtKB/TrEMBL;Acc:Q9FMI8]","protein_coding"
"Bradi1g00332","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g03956","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g21372","No alias","Brachypodium distachyon","ethylene induced calmodulin binding protein","protein_coding"
"Bradi1g31690","No alias","Brachypodium distachyon","vacuolar ATP synthase subunit A","protein_coding"
"Bradi1g43310","No alias","Brachypodium distachyon","Ankyrin repeat family protein","protein_coding"
"Bradi1g52110","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g54430","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF868)","protein_coding"
"Bradi1g70340","No alias","Brachypodium distachyon","Remorin family protein","protein_coding"
"Bradi1g73804","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g78487","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region","protein_coding"
"Bradi2g00250","No alias","Brachypodium distachyon","phloem protein 2-A1","protein_coding"
"Bradi2g06550","No alias","Brachypodium distachyon","CBL-interacting protein kinase 20","protein_coding"
"Bradi2g06650","No alias","Brachypodium distachyon","CTC-interacting domain 9","protein_coding"
"Bradi2g13170","No alias","Brachypodium distachyon","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Bradi2g21860","No alias","Brachypodium distachyon","NADH:cytochrome B5 reductase 1","protein_coding"
"Bradi2g23480","No alias","Brachypodium distachyon","Integral membrane Yip1 family protein","protein_coding"
"Bradi2g23690","No alias","Brachypodium distachyon","phosphate transporter 4;2","protein_coding"
"Bradi2g38481","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi2g44530","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi2g45140","No alias","Brachypodium distachyon","nucleotide transporter 1","protein_coding"
"Bradi2g48590","No alias","Brachypodium distachyon","phosphoribosyl pyrophosphate (PRPP) synthase 3","protein_coding"
"Bradi2g50890","No alias","Brachypodium distachyon","nucleic acid binding","protein_coding"
"Bradi2g61712","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g00681","No alias","Brachypodium distachyon","Ubiquitin-like superfamily protein","protein_coding"
"Bradi3g03930","No alias","Brachypodium distachyon","poly(A) polymerase 1","protein_coding"
"Bradi3g07830","No alias","Brachypodium distachyon","nucleotide transporter 1","protein_coding"
"Bradi3g35900","No alias","Brachypodium distachyon","Protein of unknown function (DUF3353)","protein_coding"
"Bradi3g42270","No alias","Brachypodium distachyon","glutathione S-transferase F11","protein_coding"
"Bradi3g43910","No alias","Brachypodium distachyon","RPM1 interacting protein 4","protein_coding"
"Bradi3g54140","No alias","Brachypodium distachyon","protein kinase family protein / WD-40 repeat family protein","protein_coding"
"Bradi3g54475","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding"
"Bradi4g01310","No alias","Brachypodium distachyon","ubiquitin-specific protease 8","protein_coding"
"Bradi4g12785","No alias","Brachypodium distachyon","Disease resistance protein (CC-NBS-LRR class) family","protein_coding"
"Bradi4g13220","No alias","Brachypodium distachyon","DWNN domain, a CCHC-type zinc finger","protein_coding"
"Bradi4g21283","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g25590","No alias","Brachypodium distachyon","TLC ATP/ADP transporter","protein_coding"
"Bradi4g38810","No alias","Brachypodium distachyon","ACT-like superfamily protein","protein_coding"
"Bradi4g41696","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g41920","No alias","Brachypodium distachyon","S-domain-2 5","protein_coding"
"Bradi5g05140","No alias","Brachypodium distachyon","DHHC-type zinc finger family protein","protein_coding"
"Bradi5g18241","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g20597","No alias","Brachypodium distachyon","GPCR-type G protein 1","protein_coding"
"Bradi5g25075","No alias","Brachypodium distachyon","Ribonuclease H-like superfamily protein","protein_coding"
"Bradi5g26700","No alias","Brachypodium distachyon","Protein kinase protein with tetratricopeptide repeat domain","protein_coding"
"Brara.A00216.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00300.1","No alias","Brassica rapa","calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A00543.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & serine hydroxymethyltransferase *(SHM)","protein_coding"
"Brara.A00827.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00941.1","No alias","Brassica rapa","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A01035.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01364.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01483.1","No alias","Brassica rapa","TOR-dependent regulatory protein *(MRF) of protein translation","protein_coding"
"Brara.A01592.1","No alias","Brassica rapa","extramitochondrial phosphatidylserine decarboxylase","protein_coding"
"Brara.A01633.1","No alias","Brassica rapa","outer nuclear envelope component *(WIP) of SUN-WIP cytoskeleton-nucleoskeleton-linker complex","protein_coding"
"Brara.A01641.1","No alias","Brassica rapa","cytosolic fructose-bisphosphate aldolase & fructose-bisphosphate aldolase *(FBA) & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.A01700.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A01704.1","No alias","Brassica rapa","tRNA guanine-methyltransferase *(TRM5)","protein_coding"
"Brara.A01751.1","No alias","Brassica rapa","S-adenosyl methionine transporter *(GOSAMT)","protein_coding"
"Brara.A02014.1","No alias","Brassica rapa","protein S-acyltransferase *(PAT19-21)","protein_coding"
"Brara.A02018.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02191.1","No alias","Brassica rapa","pre-40S ribosomal subunit assembly factor *(RID3)","protein_coding"
"Brara.A02199.1","No alias","Brassica rapa","group-II intron mitochondrial splicing factor *(MISF74)","protein_coding"
"Brara.A02296.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02738.1","No alias","Brassica rapa","GABA pyruvate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Brara.A03037.1","No alias","Brassica rapa","auxin signalling transcriptional co-repressor *(TPL/TPR) & transcriptional co-repressor *(TPL/TPR)","protein_coding"
"Brara.A03285.1","No alias","Brassica rapa","component *(mS78/mS79) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.A03376.1","No alias","Brassica rapa","SSU processome assembly factor *(RRP5)","protein_coding"
"Brara.A03422.1","No alias","Brassica rapa","heavy chain of clathrin triskelion","protein_coding"
"Brara.A03849.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.A03897.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00115.1","No alias","Brassica rapa","component *(eS28) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.B00397.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.B00423.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00441.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00596.1","No alias","Brassica rapa","GASA precursor polypeptide","protein_coding"
"Brara.B00677.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00789.1","No alias","Brassica rapa","subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)","protein_coding"
"Brara.B01015.1","No alias","Brassica rapa","targeting factor *(GET3B/C) & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.B01381.1","No alias","Brassica rapa","component *(TRS130/CLUB) of TRAPP-II complex-specific components","protein_coding"
"Brara.B01406.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01436.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01551.1","No alias","Brassica rapa","component *(uS10) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.B01679.1","No alias","Brassica rapa","LRK10-1-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B01845.1","No alias","Brassica rapa","mRNA endoribonuclease *(G3BP)","protein_coding"
"Brara.B01912.1","No alias","Brassica rapa","MAPKKK-kinase protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B02143.1","No alias","Brassica rapa","GDP-D-mannose pyrophosphorylase activator *(KONJAC)","protein_coding"
"Brara.B02702.1","No alias","Brassica rapa","3-hydroxy-3-methylglutaryl-CoA synthase & EC_2.3 acyltransferase","protein_coding"
"Brara.B02733.1","No alias","Brassica rapa","component *(uL6) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.B02751.1","No alias","Brassica rapa","translation initiation factor *(IF-2)","protein_coding"
"Brara.B02861.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03143.1","No alias","Brassica rapa","phosphate transporter *(PHO1) & phosphate transporter *(PHO)","protein_coding"
"Brara.B03300.1","No alias","Brassica rapa","component *(eIF3i) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Brara.B03303.1","No alias","Brassica rapa","splicing factor *(CFM9)","protein_coding"
"Brara.B03419.1","No alias","Brassica rapa","assembly factor MMS19 of cytosolic CIA system transfer phase","protein_coding"
"Brara.B03457.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03545.1","No alias","Brassica rapa","Kinesin-14-type motor protein","protein_coding"
"Brara.B03588.1","No alias","Brassica rapa","NSUN-group-V rRNA methyltransferase","protein_coding"
"Brara.B03904.1","No alias","Brassica rapa","endoribonuclease *(MNU)","protein_coding"
"Brara.B03965.1","No alias","Brassica rapa","E3 ubiquitin ligase *(WAV3)","protein_coding"
"Brara.C00104.1","No alias","Brassica rapa","adenosine kinase *(ADK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C00333.1","No alias","Brassica rapa","agmatine iminohydrolase","protein_coding"
"Brara.C00448.1","No alias","Brassica rapa","KNOX-type transcription factor","protein_coding"
"Brara.C00462.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00464.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00564.1","No alias","Brassica rapa","Rieske iron-sulphur component of cytochrome c reductase complex & EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Brara.C00594.1","No alias","Brassica rapa","histone H3K9 methyltransferase *(KYP) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Brara.C00673.1","No alias","Brassica rapa","UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.C00820.1","No alias","Brassica rapa","component *(uS9) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C00920.1","No alias","Brassica rapa","component *(MED17) of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Brara.C01007.1","No alias","Brassica rapa","HD2-type histone deacetylase *(HD2/HDT)","protein_coding"
"Brara.C01059.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01121.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01254.1","No alias","Brassica rapa","pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C01469.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01612.1","No alias","Brassica rapa","component *(uS3) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C01649.1","No alias","Brassica rapa","ligand-gated cation channel *(GLR)","protein_coding"
"Brara.C01826.1","No alias","Brassica rapa","RKF3 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C01867.1","No alias","Brassica rapa","plastidial ribonucleoprotein *(CP29)","protein_coding"
"Brara.C01881.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02216.1","No alias","Brassica rapa","regulatory protein *(THAL) of rRNA transcription control","protein_coding"
"Brara.C02235.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02279.1","No alias","Brassica rapa","component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex","protein_coding"
"Brara.C02414.1","No alias","Brassica rapa","subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)","protein_coding"
"Brara.C02509.1","No alias","Brassica rapa","LRR-VIII-1 protein kinase","protein_coding"
"Brara.C02510.1","No alias","Brassica rapa","LRR-VIII-1 protein kinase","protein_coding"
"Brara.C02653.1","No alias","Brassica rapa","substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.C02741.1","No alias","Brassica rapa","EC_3.6 hydrolase acting on acid anhydride & regulatory ATPase *(NSF/SEC18)","protein_coding"
"Brara.C02742.1","No alias","Brassica rapa","SSU processome assembly factor *(UTP21)","protein_coding"
"Brara.C02749.1","No alias","Brassica rapa","SSU processome assembly factor *(RRP9/YAO1)","protein_coding"
"Brara.C02781.1","No alias","Brassica rapa","translation elongation factor *(EF-Tu)","protein_coding"
"Brara.C03002.1","No alias","Brassica rapa","component *(mS80) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.C03154.1","No alias","Brassica rapa","borate transporter *(BOR)","protein_coding"
"Brara.C03185.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03519.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond & pectin methylesterase","protein_coding"
"Brara.C03540.1","No alias","Brassica rapa","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C03640.1","No alias","Brassica rapa","S-adenosyl methionine synthetase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.C03792.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03973.1","No alias","Brassica rapa","TDIF precursor polypeptide","protein_coding"
"Brara.C04055.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04224.1","No alias","Brassica rapa","RNA editing factor *(ORRM3)","protein_coding"
"Brara.C04236.1","No alias","Brassica rapa","assembly factor ISD11 of mitochondrial ISC system assembly phase","protein_coding"
"Brara.C04289.1","No alias","Brassica rapa","LRR-XI protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C04297.1","No alias","Brassica rapa","component *(uL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.C04319.1","No alias","Brassica rapa","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C04537.1","No alias","Brassica rapa","beta amylase & EC_3.2 glycosylase","protein_coding"
"Brara.C04612.1","No alias","Brassica rapa","component *(USP39) of U4/U6.U5 tri-snRNP complex","protein_coding"
"Brara.D00008.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.D00061.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00067.1","No alias","Brassica rapa","component *(eS31) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.D00093.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00196.1","No alias","Brassica rapa","RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI)","protein_coding"
"Brara.D00227.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00230.1","No alias","Brassica rapa","ketol-acid reductoisomerase & ketol-acid reductoisomerase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.D00408.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding"
"Brara.D00507.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00941.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01037.1","No alias","Brassica rapa","regulatory protein *(Emb506) of embryogenesis","protein_coding"
"Brara.D01071.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01213.1","No alias","Brassica rapa","EC_6.1 ligase forming carbon-oxygen bond & isoleucine-tRNA ligase","protein_coding"
"Brara.D01400.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01434.1","No alias","Brassica rapa","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"Brara.D01444.1","No alias","Brassica rapa","nuclear-encoded organellar RNA polymerase *(NEP)","protein_coding"
"Brara.D01606.1","No alias","Brassica rapa","calcium sensor *(CML) & calcium sensor *(CaM)","protein_coding"
"Brara.D01611.1","No alias","Brassica rapa","component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Brara.D01618.1","No alias","Brassica rapa","ribosome assembly GTPase *(LSG1)","protein_coding"
"Brara.D01871.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01887.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02261.1","No alias","Brassica rapa","plastidial ribonucleoprotein *(CP29)","protein_coding"
"Brara.D02422.1","No alias","Brassica rapa","component *(SPCs2) of SPC endoplasmic signal peptidase complex","protein_coding"
"Brara.D02584.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.D02697.1","No alias","Brassica rapa","protoheme IX farnesyltransferase (COX10) in cytochrome c oxidase assembly","protein_coding"
"Brara.D02698.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E00140.1","No alias","Brassica rapa","jasmonoyl-amino acid synthetase *(JAR1)","protein_coding"
"Brara.E00449.1","No alias","Brassica rapa","alpha-1,3-glucosyltransferase *(ALG8)","protein_coding"
"Brara.E00476.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00477.1","No alias","Brassica rapa","translation elongation factor *(EF-G)","protein_coding"
"Brara.E00666.1","No alias","Brassica rapa","2-keto acid transporter *(BAT)","protein_coding"
"Brara.E00676.1","No alias","Brassica rapa","fatty acid export protein *(FAX)","protein_coding"
"Brara.E00718.1","No alias","Brassica rapa","component *(ARRS1) of ARPF2-ARRS1 complex","protein_coding"
"Brara.E00858.1","No alias","Brassica rapa","component *(eL40) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E00867.1","No alias","Brassica rapa","transcriptional co-regulator *(OFP)","protein_coding"
"Brara.E00990.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00995.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01157.1","No alias","Brassica rapa","component *(SF3A2) of splicing factor 3A complex","protein_coding"
"Brara.E01336.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01383.1","No alias","Brassica rapa","regulatory factor *(eIF5C) of eIF2 Met-tRNA binding factor activity","protein_coding"
"Brara.E01415.1","No alias","Brassica rapa","RNA editing factor *(MEF11)","protein_coding"
"Brara.E01723.1","No alias","Brassica rapa","component *(uS10m) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.E01742.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding"
"Brara.E02059.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02162.1","No alias","Brassica rapa","starch branching enzyme & EC_2.4 glycosyltransferase","protein_coding"
"Brara.E02180.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.E02396.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02483.1","No alias","Brassica rapa","rRNA processing factor involved in ITS2 rRNA removal *(APUM24)","protein_coding"
"Brara.E02489.1","No alias","Brassica rapa","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"Brara.E02516.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02721.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02727.1","No alias","Brassica rapa","EC_2.3 acyltransferase & E2 component of mitochondrial pyruvate dehydrogenase complex","protein_coding"
"Brara.E02768.1","No alias","Brassica rapa","lysine-tRNA ligase","protein_coding"
"Brara.E02784.1","No alias","Brassica rapa","cation antiporter *(CAX)","protein_coding"
"Brara.E02860.1","No alias","Brassica rapa","ribosomal protein arginine N-methyltransferase *(PRMT3)","protein_coding"
"Brara.E02980.1","No alias","Brassica rapa","indole-3-acetic acid carboxyl methyltransferase *(MES17)","protein_coding"
"Brara.E03160.1","No alias","Brassica rapa","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.E03168.1","No alias","Brassica rapa","thymidine kinase *(TK1) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E03242.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03395.1","No alias","Brassica rapa","telomeric dsDNA-binding protein","protein_coding"
"Brara.E03461.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding"
"Brara.E03646.1","No alias","Brassica rapa","E2F-type transcription factor & cell cycle interphase transcription factor *(DEL)","protein_coding"
"Brara.F00123.1","No alias","Brassica rapa","subfamily ABCG transporter","protein_coding"
"Brara.F00265.1","No alias","Brassica rapa","component *(BET5) of TRAPP-I/II/III complex-shared components","protein_coding"
"Brara.F00468.1","No alias","Brassica rapa","component *(uS8) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.F00527.1","No alias","Brassica rapa","transcription factor *(YABBY)","protein_coding"
"Brara.F00636.1","No alias","Brassica rapa","TruA-type tRNA pseudouridine synthase & EC_5.4 intramolecular transferase","protein_coding"
"Brara.F01029.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01066.1","No alias","Brassica rapa","ATP","protein_coding"
"Brara.F01077.1","No alias","Brassica rapa","proton-translocating pyrophosphatase *(VHP1) & proton-translocating pyrophosphatase *(VHP1)","protein_coding"
"Brara.F01078.1","No alias","Brassica rapa","cofactor of plastid-encoded RNA polymerase *(TAC17)","protein_coding"
"Brara.F01312.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01619.1","No alias","Brassica rapa","RNA editing factor *(ECD1)","protein_coding"
"Brara.F02099.1","No alias","Brassica rapa","betaine-aldehyde dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.F02162.1","No alias","Brassica rapa","component *(mS81) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.F02228.1","No alias","Brassica rapa","exoribonuclease *(RNase J)","protein_coding"
"Brara.F02248.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.F02453.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group","protein_coding"
"Brara.F02597.1","No alias","Brassica rapa","calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"Brara.F02606.1","No alias","Brassica rapa","MAP-kinase protein phosphatase","protein_coding"
"Brara.F03020.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & small subunit *(APS) of ADP-glucose pyrophosphorylase","protein_coding"
"Brara.F03166.1","No alias","Brassica rapa","DNA repair endonuclease *(XPG)","protein_coding"
"Brara.F03414.1","No alias","Brassica rapa","scaffold component of spliceosomal snRNP assembly complex","protein_coding"
"Brara.F03446.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03745.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03751.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.F03753.1","No alias","Brassica rapa","component *(eIF3d) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Brara.F03762.1","No alias","Brassica rapa","C2H2 subclass IDD transcription factor","protein_coding"
"Brara.G00077.1","No alias","Brassica rapa","histone methylase *(PRMT1)","protein_coding"
"Brara.G00136.1","No alias","Brassica rapa","RLCK-VI receptor-like protein kinase & interactive protein kinase of ROP-GTPase activity *(RBK/RRK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G00202.1","No alias","Brassica rapa","component *(NOC2) of ribosomal-subunit proteome nuclear export complexes","protein_coding"
"Brara.G00543.1","No alias","Brassica rapa","SSU processome assembly factor *(ENP1)","protein_coding"
"Brara.G00586.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00606.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00750.1","No alias","Brassica rapa","component *(NRPA2) of RNA polymerase I complex","protein_coding"
"Brara.G00926.1","No alias","Brassica rapa","component *(mS23) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.G00933.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01064.1","No alias","Brassica rapa","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.G01178.1","No alias","Brassica rapa","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G01429.1","No alias","Brassica rapa","Thaumatin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G01605.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01629.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01807.1","No alias","Brassica rapa","ketol-acid reductoisomerase & ketol-acid reductoisomerase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G01908.1","No alias","Brassica rapa","component *(eS27) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.G02026.1","No alias","Brassica rapa","ATP","protein_coding"
"Brara.G02029.1","No alias","Brassica rapa","RNA editing factor *(POCO)","protein_coding"
"Brara.G02154.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02392.1","No alias","Brassica rapa","component *(CstF64/Rna15) of Cleavage Stimulatory Factor (CstF) complex","protein_coding"
"Brara.G02915.1","No alias","Brassica rapa","alpha amylase","protein_coding"
"Brara.G02937.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(ISE2)","protein_coding"
"Brara.G03062.1","No alias","Brassica rapa","type-I inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.G03129.1","No alias","Brassica rapa","component *(NOC1) of ribosomal-subunit proteome nuclear export complex","protein_coding"
"Brara.G03133.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03331.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03345.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03373.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03402.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & sterol C-24 methyltransferase","protein_coding"
"Brara.G03410.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.G03558.1","No alias","Brassica rapa","substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.G03601.1","No alias","Brassica rapa","component *(POLD3) of DNA polymerase delta complex","protein_coding"
"Brara.G03640.1","No alias","Brassica rapa","component *(NOC3) of ribosomal-subunit proteome nuclear export complex","protein_coding"
"Brara.G03666.1","No alias","Brassica rapa","EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor & NAD-dependent succinic semialdehyde dehydrogenase","protein_coding"
"Brara.G03718.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G03739.1","No alias","Brassica rapa","ATP","protein_coding"
"Brara.H00212.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00308.1","No alias","Brassica rapa","assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II)","protein_coding"
"Brara.H00514.1","No alias","Brassica rapa","component *(NYC1) of chlorophyll b reductase complex","protein_coding"
"Brara.H00582.1","No alias","Brassica rapa","glycerol-3-phosphate acyltransferase *(ATS1)","protein_coding"
"Brara.H00624.1","No alias","Brassica rapa","phosphomevalonate kinase *(PMK)","protein_coding"
"Brara.H00677.1","No alias","Brassica rapa","phosphometabolite transporter *(TPT/PPT/GPT/XPT)","protein_coding"
"Brara.H00713.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00866.1","No alias","Brassica rapa","RGF precursor polypeptide","protein_coding"
"Brara.H00871.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00907.1","No alias","Brassica rapa","AHL clade-B transcription factor","protein_coding"
"Brara.H01054.1","No alias","Brassica rapa","component *(SF3B2) of splicing factor 3B complex","protein_coding"
"Brara.H01223.1","No alias","Brassica rapa","flavonol 3-O-glycosyltransferase & EC_2.4 glycosyltransferase","protein_coding"
"Brara.H01299.1","No alias","Brassica rapa","FRS/FRF-type transcription factor","protein_coding"
"Brara.H01346.1","No alias","Brassica rapa","subunit beta of cargo adaptor F-subcomplex","protein_coding"
"Brara.H01373.1","No alias","Brassica rapa","arginine methyltransferase *(PRMT5/CAU1) & histone methylase *(CAU1/PRMT5)","protein_coding"
"Brara.H01385.1","No alias","Brassica rapa","component *(bL21m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.H01473.1","No alias","Brassica rapa","arginine methyltransferase *(PRMT5/CAU1) & histone methylase *(CAU1/PRMT5)","protein_coding"
"Brara.H01546.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01650.1","No alias","Brassica rapa","chaperone for membrane proteins *(AKR2)","protein_coding"
"Brara.H01681.1","No alias","Brassica rapa","pre-40S ribosomal subunit assembly factor *(UTP22)","protein_coding"
"Brara.H01821.1","No alias","Brassica rapa","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H01867.1","No alias","Brassica rapa","histidine-tRNA ligase","protein_coding"
"Brara.H01961.1","No alias","Brassica rapa","component *(Pex7) of cargo-receptor system","protein_coding"
"Brara.H02007.1","No alias","Brassica rapa","co-chaperone *(Hsp40)","protein_coding"
"Brara.H02269.1","No alias","Brassica rapa","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.H02457.1","No alias","Brassica rapa","regulatory component B of PP2A phosphatase complexes","protein_coding"
"Brara.H02531.1","No alias","Brassica rapa","ATP","protein_coding"
"Brara.H02760.1","No alias","Brassica rapa","tRNA cytidine acetyltransferase","protein_coding"
"Brara.H02778.1","No alias","Brassica rapa","transcriptional repressor *(NF-X1)","protein_coding"
"Brara.I00202.1","No alias","Brassica rapa","NDX-type transcription factor","protein_coding"
"Brara.I00508.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & phosphoglucan water dikinase *(PWD)","protein_coding"
"Brara.I00548.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00608.1","No alias","Brassica rapa","calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00701.1","No alias","Brassica rapa","LRR-XIIIa protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00734.1","No alias","Brassica rapa","GET3-recruitment component *(GET4) of GET4-GET5 scaffold subcomplex","protein_coding"
"Brara.I00829.1","No alias","Brassica rapa","LRR-XI protein kinase & IDA/IDL-peptide receptor kinase *(HAESA) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00871.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00901.1","No alias","Brassica rapa","SSU processome assembly factor *(MPP10)","protein_coding"
"Brara.I01036.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01248.1","No alias","Brassica rapa","cofactor of plastid-encoded RNA polymerase *(PAP11/MURE) & catalytic protein *(MurE) of UDP-N-acetylmuramic acid pentapeptide formation","protein_coding"
"Brara.I01399.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01504.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I01580.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.I01685.1","No alias","Brassica rapa","RNA editing factor *(PGN)","protein_coding"
"Brara.I02094.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02153.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02242.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02895.1","No alias","Brassica rapa","subunit alpha of co-translational insertion system Sec61 subcomplex","protein_coding"
"Brara.I02922.1","No alias","Brassica rapa","component *(bL34c) of large plastid ribosomal-subunit proteome","protein_coding"
"Brara.I03016.1","No alias","Brassica rapa","component *(uL22) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I03077.1","No alias","Brassica rapa","LRK10-1-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I03150.1","No alias","Brassica rapa","component *(ORC6) of origin recognition complex","protein_coding"
"Brara.I03547.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03636.1","No alias","Brassica rapa","plastidial ribonucleoprotein *(CP29)","protein_coding"
"Brara.I03694.1","No alias","Brassica rapa","gravity signalling transcription factor *(SCR) & GRAS-type transcription factor","protein_coding"
"Brara.I03784.1","No alias","Brassica rapa","phragmoplastin-interacting factor *(PHIP1)","protein_coding"
"Brara.I03803.1","No alias","Brassica rapa","component *(NOC2) of ribosomal-subunit proteome nuclear export complexes","protein_coding"
"Brara.I03850.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03894.1","No alias","Brassica rapa","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I04043.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04074.1","No alias","Brassica rapa","RLCK-VIII receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I04096.1","No alias","Brassica rapa","component *(NRP-ABCDE8) of RNA polymerase complexes","protein_coding"
"Brara.I04115.1","No alias","Brassica rapa","ribosome docking factor *(MDM38)","protein_coding"
"Brara.I04191.1","No alias","Brassica rapa","component *(uS15) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I04317.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04503.1","No alias","Brassica rapa","nuclear-encoded organellar RNA polymerase *(NEP)","protein_coding"
"Brara.I04872.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & beta-1,4-mannosyl-transferase *(ALG1)","protein_coding"
"Brara.I05001.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05045.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05137.1","No alias","Brassica rapa","nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR)","protein_coding"
"Brara.I05155.1","No alias","Brassica rapa","serine-tRNA ligase","protein_coding"
"Brara.I05305.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05338.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.I05483.1","No alias","Brassica rapa","flavin-dependent monooxygenase *(YUCCA)","protein_coding"
"Brara.I05506.1","No alias","Brassica rapa","component *(eIF2-gamma) of eIF2 Met-tRNA binding factor complex","protein_coding"
"Brara.I05522.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00137.1","No alias","Brassica rapa","pre-60S ribosomal subunit assembly factor *(NOP16)","protein_coding"
"Brara.J00444.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00455.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.J00477.1","No alias","Brassica rapa","component *(Tic110) of inner envelope TIC translocation system","protein_coding"
"Brara.J00557.1","No alias","Brassica rapa","ATP","protein_coding"
"Brara.J00692.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00971.1","No alias","Brassica rapa","nucleotide exchange factor *(MGE)","protein_coding"
"Brara.J01839.1","No alias","Brassica rapa","regulatory protein *(SBA) of mitochondrial nucleoid organization","protein_coding"
"Brara.J01897.1","No alias","Brassica rapa","glucose transporter *(GlcT) & hexose transporter *(SGB/GlcT)","protein_coding"
"Brara.J01965.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02070.1","No alias","Brassica rapa","component *(ELP1) of ELONGATOR transcription elongation complex","protein_coding"
"Brara.J02236.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02258.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02456.1","No alias","Brassica rapa","Qa-type SYP1-group component of SNARE membrane fusion complex","protein_coding"
"Brara.J02506.1","No alias","Brassica rapa","Prgrammed Cell Death suppressor *(BON)","protein_coding"
"Brara.J02598.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02670.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02746.1","No alias","Brassica rapa","starch-debranching pullulan-6-glucanohydrolase *(PU1)","protein_coding"
"Brara.J02803.1","No alias","Brassica rapa","transcriptional memory factor *(HsfA3) & HSF-type transcription factor","protein_coding"
"Brara.K00022.1","No alias","Brassica rapa","SSU processome assembly factor *(SOF1)","protein_coding"
"Brara.K00179.1","No alias","Brassica rapa","MRM2-type rRNA methyltransferase","protein_coding"
"Brara.K00656.1","No alias","Brassica rapa","signal peptidase *(SPP)","protein_coding"
"Brara.K01009.1","No alias","Brassica rapa","diaminopimelate decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.K01179.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase) & Nardilysin-like peptidase","protein_coding"
"Brara.K01270.1","No alias","Brassica rapa","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Brara.K01448.1","No alias","Brassica rapa","microtubule-stabilizing factor *(WDL)","protein_coding"
"Brara.K01454.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01789.1","No alias","Brassica rapa","RNA editing factor *(MORF)","protein_coding"
"Brara.K01872.1","No alias","Brassica rapa","transcriptional co-repressor *(AFP/NINJA)","protein_coding"
"Cre01.g000150","No alias","Chlamydomonas reinhardtii","zinc transporter 7 precursor","protein_coding"
"Cre01.g000400","No alias","Chlamydomonas reinhardtii","xyloglucanase 113","protein_coding"
"Cre01.g012600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g022400","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre01.g029950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g032400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g032750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g034050","No alias","Chlamydomonas reinhardtii","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Cre01.g035850","No alias","Chlamydomonas reinhardtii","clone eighty-four","protein_coding"
"Cre01.g038400","No alias","Chlamydomonas reinhardtii","calreticulin 1b","protein_coding"
"Cre01.g039350","No alias","Chlamydomonas reinhardtii","P450 reductase 1","protein_coding"
"Cre01.g048300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g050500","No alias","Chlamydomonas reinhardtii","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Cre01.g050850","No alias","Chlamydomonas reinhardtii","BRI1 suppressor 1 (BSU1)-like 3","protein_coding"
"Cre01.g052050","No alias","Chlamydomonas reinhardtii","ubiquinol-cytochrome C chaperone family protein","protein_coding"
"Cre01.g055469","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre02.g076350","No alias","Chlamydomonas reinhardtii","ATPase, V1 complex, subunit B protein","protein_coding"
"Cre02.g078750","No alias","Chlamydomonas reinhardtii","Pseudouridine synthase family protein","protein_coding"
"Cre02.g080400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g080650","No alias","Chlamydomonas reinhardtii","Chaperone protein htpG family protein","protein_coding"
"Cre02.g080700","No alias","Chlamydomonas reinhardtii","Heat shock protein 70 (Hsp 70) family protein","protein_coding"
"Cre02.g081650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g087450","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF155)","protein_coding"
"Cre02.g089274","No alias","Chlamydomonas reinhardtii","ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Cre02.g090650","No alias","Chlamydomonas reinhardtii","Sec20 family protein","protein_coding"
"Cre02.g091150","No alias","Chlamydomonas reinhardtii","Sec23/Sec24 protein transport family protein","protein_coding"
"Cre02.g092400","No alias","Chlamydomonas reinhardtii","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain","protein_coding"
"Cre02.g095114","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095126","No alias","Chlamydomonas reinhardtii","disproportionating enzyme 2","protein_coding"
"Cre02.g096400","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF185)","protein_coding"
"Cre02.g098450","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 2 gamma subunit","protein_coding"
"Cre02.g099879","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g109366","No alias","Chlamydomonas reinhardtii","SET domain protein 35","protein_coding"
"Cre02.g110650","No alias","Chlamydomonas reinhardtii","O-fucosyltransferase family protein","protein_coding"
"Cre02.g114100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g114450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g115150","No alias","Chlamydomonas reinhardtii","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"Cre02.g117500","No alias","Chlamydomonas reinhardtii","hexokinase 3","protein_coding"
"Cre02.g117550","No alias","Chlamydomonas reinhardtii","Ankyrin repeat family protein","protein_coding"
"Cre02.g144300","No alias","Chlamydomonas reinhardtii","Nucleotide-sugar transporter family protein","protein_coding"
"Cre03.g145727","No alias","Chlamydomonas reinhardtii","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding"
"Cre03.g150200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g154900","No alias","Chlamydomonas reinhardtii","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Cre03.g157000","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre03.g163200","No alias","Chlamydomonas reinhardtii","sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors","protein_coding"
"Cre03.g165400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g165950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g169850","No alias","Chlamydomonas reinhardtii","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding"
"Cre03.g170450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g171600","No alias","Chlamydomonas reinhardtii","Survival protein SurE-like phosphatase/nucleotidase","protein_coding"
"Cre03.g174150","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with  ABF2","protein_coding"
"Cre03.g175250","No alias","Chlamydomonas reinhardtii","squalene synthase 1","protein_coding"
"Cre03.g180850","No alias","Chlamydomonas reinhardtii","Sec23/Sec24 protein transport family protein","protein_coding"
"Cre03.g182500","No alias","Chlamydomonas reinhardtii","SRP72 RNA-binding domain","protein_coding"
"Cre03.g185850","No alias","Chlamydomonas reinhardtii","pfkB-like carbohydrate kinase family protein","protein_coding"
"Cre03.g189400","No alias","Chlamydomonas reinhardtii","seryl-tRNA synthetase / serine--tRNA ligase","protein_coding"
"Cre03.g190100","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 3B-2","protein_coding"
"Cre03.g194400","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre03.g194517","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g199900","No alias","Chlamydomonas reinhardtii","Eukaryotic initiation factor 4E protein","protein_coding"
"Cre03.g204353","No alias","Chlamydomonas reinhardtii","GTP-binding protein 1","protein_coding"
"Cre03.g207502","No alias","Chlamydomonas reinhardtii","DHHC-type zinc finger family protein","protein_coding"
"Cre03.g207700","No alias","Chlamydomonas reinhardtii","farnesyl diphosphate synthase 2","protein_coding"
"Cre04.g211750","No alias","Chlamydomonas reinhardtii","heptahelical protein 4","protein_coding"
"Cre04.g211950","No alias","Chlamydomonas reinhardtii","Exostosin family protein","protein_coding"
"Cre04.g213950","No alias","Chlamydomonas reinhardtii","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Cre04.g216650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g217909","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g221200","No alias","Chlamydomonas reinhardtii","Homeodomain-like/winged-helix DNA-binding family protein","protein_coding"
"Cre04.g222850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g225400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g233003","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232850","No alias","Chlamydomonas reinhardtii","cytochrome c oxidase 17","protein_coding"
"Cre05.g242300","No alias","Chlamydomonas reinhardtii","Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)","protein_coding"
"Cre05.g245900","No alias","Chlamydomonas reinhardtii","branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5)","protein_coding"
"Cre06.g250100","No alias","Chlamydomonas reinhardtii","chloroplast heat shock protein 70-2","protein_coding"
"Cre06.g250250","No alias","Chlamydomonas reinhardtii","vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)","protein_coding"
"Cre06.g252100","No alias","Chlamydomonas reinhardtii","HEAT/U-box domain-containing protein","protein_coding"
"Cre06.g260250","No alias","Chlamydomonas reinhardtii","CemA-like proton extrusion protein-related","protein_coding"
"Cre06.g265750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g267850","No alias","Chlamydomonas reinhardtii","scramblase-related","protein_coding"
"Cre06.g273300","No alias","Chlamydomonas reinhardtii","Threonyl-tRNA synthetase","protein_coding"
"Cre06.g276400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g277350","No alias","Chlamydomonas reinhardtii","histone deacetylase 1","protein_coding"
"Cre06.g277450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278094","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre06.g278116","No alias","Chlamydomonas reinhardtii","Nucleotidylyl transferase superfamily protein","protein_coding"
"Cre06.g278154","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278162","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278262","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278263","No alias","Chlamydomonas reinhardtii","esterase/lipase/thioesterase family protein","protein_coding"
"Cre06.g278264","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF1350)","protein_coding"
"Cre06.g283400","No alias","Chlamydomonas reinhardtii","Sucrose-6F-phosphate phosphohydrolase family protein","protein_coding"
"Cre06.g284050","No alias","Chlamydomonas reinhardtii","YEATS family protein","protein_coding"
"Cre06.g284750","No alias","Chlamydomonas reinhardtii","Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding"
"Cre06.g288500","No alias","Chlamydomonas reinhardtii","Nucleotide-diphospho-sugar transferase family protein","protein_coding"
"Cre06.g293582","No alias","Chlamydomonas reinhardtii","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding"
"Cre06.g293700","No alias","Chlamydomonas reinhardtii","Ribosomal protein L12 family protein","protein_coding"
"Cre06.g294500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g298200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g298600","No alias","Chlamydomonas reinhardtii","zinc ion binding","protein_coding"
"Cre06.g298950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g302450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g302750","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre06.g302800","No alias","Chlamydomonas reinhardtii","with no lysine (K) kinase 3","protein_coding"
"Cre06.g303350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g306000","No alias","Chlamydomonas reinhardtii","glyoxal oxidase-related protein","protein_coding"
"Cre06.g308850","No alias","Chlamydomonas reinhardtii","Translation initiation factor eIF3 subunit","protein_coding"
"Cre06.g308900","No alias","Chlamydomonas reinhardtii","Outer membrane OMP85 family protein","protein_coding"
"Cre07.g315300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g315900","No alias","Chlamydomonas reinhardtii","emp24/gp25L/p24 family/GOLD family protein","protein_coding"
"Cre07.g319701","No alias","Chlamydomonas reinhardtii","GATA transcription factor 11","protein_coding"
"Cre07.g320150","No alias","Chlamydomonas reinhardtii","DNAJ heat shock family protein","protein_coding"
"Cre07.g324500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g326600","No alias","Chlamydomonas reinhardtii","PDI-like 2-2","protein_coding"
"Cre07.g331000","No alias","Chlamydomonas reinhardtii","proteasome inhibitor-related","protein_coding"
"Cre07.g336200","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 12","protein_coding"
"Cre07.g339550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g339554","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g350500","No alias","Chlamydomonas reinhardtii","ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding"
"Cre07.g355150","No alias","Chlamydomonas reinhardtii","zinc transporter 5 precursor","protein_coding"
"Cre07.g355650","No alias","Chlamydomonas reinhardtii","ammonium transporter 1;2","protein_coding"
"Cre08.g358250","No alias","Chlamydomonas reinhardtii","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Cre08.g358526","No alias","Chlamydomonas reinhardtii","nucleotide transporter 1","protein_coding"
"Cre08.g358570","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding"
"Cre08.g359650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g360801","No alias","Chlamydomonas reinhardtii","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Cre08.g362300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g366800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g367800","No alias","Chlamydomonas reinhardtii","nudix hydrolase homolog 8","protein_coding"
"Cre08.g383000","No alias","Chlamydomonas reinhardtii","target of early activation tagged (EAT) 2","protein_coding"
"Cre08.g383050","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre09.g386113","No alias","Chlamydomonas reinhardtii","Insulinase (Peptidase family M16) family protein","protein_coding"
"Cre09.g388319","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre09.g389356","No alias","Chlamydomonas reinhardtii","permease, cytosine/purines, uracil, thiamine, allantoin family protein","protein_coding"
"Cre09.g389689","No alias","Chlamydomonas reinhardtii","semialdehyde dehydrogenase family protein","protein_coding"
"Cre09.g389801","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g390282","No alias","Chlamydomonas reinhardtii","TMPIT-like protein","protein_coding"
"Cre09.g390400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g390750","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre09.g391400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g392503","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g393200","No alias","Chlamydomonas reinhardtii","mitochondrial HSO70 2","protein_coding"
"Cre09.g394050","No alias","Chlamydomonas reinhardtii","DHHC-type zinc finger family protein","protein_coding"
"Cre09.g394102","No alias","Chlamydomonas reinhardtii","guanylate kinase","protein_coding"
"Cre09.g394547","No alias","Chlamydomonas reinhardtii","Carbohydrate-binding-like fold","protein_coding"
"Cre09.g394800","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding"
"Cre09.g394850","No alias","Chlamydomonas reinhardtii","membrane protein, putative","protein_coding"
"Cre09.g395917","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g396883","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g398700","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre09.g399350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g405050","No alias","Chlamydomonas reinhardtii","vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)","protein_coding"
"Cre09.g406750","No alias","Chlamydomonas reinhardtii","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Cre09.g412300","No alias","Chlamydomonas reinhardtii","Protein Transporter, Pam16","protein_coding"
"Cre09.g415500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g423750","No alias","Chlamydomonas reinhardtii","coenzyme Q 3","protein_coding"
"Cre10.g429100","No alias","Chlamydomonas reinhardtii","Class II aaRS and biotin synthetases superfamily protein","protein_coding"
"Cre10.g429800","No alias","Chlamydomonas reinhardtii","ABC transporter 1","protein_coding"
"Cre10.g430800","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre10.g431800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g438150","No alias","Chlamydomonas reinhardtii","zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein","protein_coding"
"Cre10.g439000","No alias","Chlamydomonas reinhardtii","ABC transporter family protein","protein_coding"
"Cre10.g444550","No alias","Chlamydomonas reinhardtii","signal peptide peptidase","protein_coding"
"Cre10.g445850","No alias","Chlamydomonas reinhardtii","MATE efflux family protein","protein_coding"
"Cre10.g450150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g457700","No alias","Chlamydomonas reinhardtii","calmodulin-domain protein kinase cdpk isoform 2","protein_coding"
"Cre10.g458300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g461900","No alias","Chlamydomonas reinhardtii","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Cre10.g463300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467695","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467702","No alias","Chlamydomonas reinhardtii","structural constituent of ribosome;protein binding","protein_coding"
"Cre11.g467754","No alias","Chlamydomonas reinhardtii","golgi nucleotide sugar transporter 3","protein_coding"
"Cre11.g467768","No alias","Chlamydomonas reinhardtii","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Cre11.g467781","No alias","Chlamydomonas reinhardtii","ABC transporter family protein","protein_coding"
"Cre11.g467795","No alias","Chlamydomonas reinhardtii","endoplasmic reticulum-type calcium-transporting ATPase 3","protein_coding"
"Cre11.g469400","No alias","Chlamydomonas reinhardtii","pseudo-response regulator 3","protein_coding"
"Cre11.g476100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g485250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g489600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g490000","No alias","Chlamydomonas reinhardtii","Eukaryotic translation initiation factor 2 subunit 1","protein_coding"
"Cre12.g493750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g495100","No alias","Chlamydomonas reinhardtii","myb-like HTH transcriptional regulator family protein","protein_coding"
"Cre12.g495650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g498100","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 3E","protein_coding"
"Cre12.g498700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g500450","No alias","Chlamydomonas reinhardtii","DNAse I-like superfamily protein","protein_coding"
"Cre12.g503950","No alias","Chlamydomonas reinhardtii","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Cre12.g507050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g510000","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF760)","protein_coding"
"Cre12.g513254","No alias","Chlamydomonas reinhardtii","sterile alpha motif (SAM) domain-containing protein","protein_coding"
"Cre12.g519300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g521000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g522350","No alias","Chlamydomonas reinhardtii","Nucleotidylyl transferase superfamily protein","protein_coding"
"Cre12.g522450","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding"
"Cre12.g525650","No alias","Chlamydomonas reinhardtii","chloroplastic NIFS-like cysteine desulfurase","protein_coding"
"Cre12.g528450","No alias","Chlamydomonas reinhardtii","L-aspartate oxidase","protein_coding"
"Cre12.g529100","No alias","Chlamydomonas reinhardtii","ATPase, F0/V0 complex, subunit C protein","protein_coding"
"Cre12.g530550","No alias","Chlamydomonas reinhardtii","sphingosine kinase 1","protein_coding"
"Cre12.g534600","No alias","Chlamydomonas reinhardtii","translocase of outer membrane 20 kDa subunit 3","protein_coding"
"Cre12.g539000","No alias","Chlamydomonas reinhardtii","phosphorylethanolamine cytidylyltransferase 1","protein_coding"
"Cre12.g540550","No alias","Chlamydomonas reinhardtii","soluble epoxide hydrolase","protein_coding"
"Cre12.g544551","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g550400","No alias","Chlamydomonas reinhardtii","Glutaredoxin family protein","protein_coding"
"Cre12.g551500","No alias","Chlamydomonas reinhardtii","gametophytic factor 2","protein_coding"
"Cre12.g553550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g555500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g555650","No alias","Chlamydomonas reinhardtii","Nucleotide-diphospho-sugar transferase family protein","protein_coding"
"Cre12.g555850","No alias","Chlamydomonas reinhardtii","PPPDE putative thiol peptidase family protein","protein_coding"
"Cre12.g556600","No alias","Chlamydomonas reinhardtii","aldehyde dehydrogenase 11A3","protein_coding"
"Cre12.g558150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g564250","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 3A","protein_coding"
"Cre13.g565517","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g569200","No alias","Chlamydomonas reinhardtii","Signal recognition particle, SRP54 subunit protein","protein_coding"
"Cre13.g577650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g578600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g579200","No alias","Chlamydomonas reinhardtii","serine/threonine protein kinase 2","protein_coding"
"Cre13.g579850","No alias","Chlamydomonas reinhardtii","Endoplasmic reticulum vesicle transporter protein","protein_coding"
"Cre13.g580150","No alias","Chlamydomonas reinhardtii","Major facilitator superfamily protein","protein_coding"
"Cre13.g580300","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre13.g580900","No alias","Chlamydomonas reinhardtii","Serine/threonine-protein kinase Rio1","protein_coding"
"Cre13.g581400","No alias","Chlamydomonas reinhardtii","nucleotide transporter 1","protein_coding"
"Cre13.g582150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g582476","No alias","Chlamydomonas reinhardtii","nudix hydrolase homolog 19","protein_coding"
"Cre13.g589400","No alias","Chlamydomonas reinhardtii","CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein","protein_coding"
"Cre13.g590950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g591900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g603850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g604300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g604750","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding"
"Cre13.g607200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g610700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g611850","No alias","Chlamydomonas reinhardtii","transmembrane nine 1","protein_coding"
"Cre14.g613950","No alias","Chlamydomonas reinhardtii","ATP-binding cassette A2","protein_coding"
"Cre14.g614550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g614800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g618700","No alias","Chlamydomonas reinhardtii","mitochondrial ribosomal protein S7","protein_coding"
"Cre14.g620350","No alias","Chlamydomonas reinhardtii","GTP cyclohydrolase II","protein_coding"
"Cre14.g620750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g626500","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre14.g627850","No alias","Chlamydomonas reinhardtii","Dihydrodipicolinate reductase, bacterial/plant","protein_coding"
"Cre14.g634236","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g639503","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre16.g650200","No alias","Chlamydomonas reinhardtii","folate transporter 1","protein_coding"
"Cre16.g650800","No alias","Chlamydomonas reinhardtii","translocase of the inner mitochondrial membrane 13","protein_coding"
"Cre16.g652100","No alias","Chlamydomonas reinhardtii","methionine aminopeptidase 2B","protein_coding"
"Cre16.g658650","No alias","Chlamydomonas reinhardtii","Myosin family protein with Dil domain","protein_coding"
"Cre16.g660390","No alias","Chlamydomonas reinhardtii","Regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Cre16.g673550","No alias","Chlamydomonas reinhardtii","S-methyl-5-thioribose kinase","protein_coding"
"Cre16.g675246","No alias","Chlamydomonas reinhardtii","PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein","protein_coding"
"Cre16.g675250","No alias","Chlamydomonas reinhardtii","Biotin/lipoate A/B protein ligase family","protein_coding"
"Cre16.g676314","No alias","Chlamydomonas reinhardtii","translation initiation factor 3 subunit H1","protein_coding"
"Cre16.g679250","No alias","Chlamydomonas reinhardtii","Chlorophyll A-B binding family protein","protein_coding"
"Cre16.g680450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g684150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g686002","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 17","protein_coding"
"Cre16.g688000","No alias","Chlamydomonas reinhardtii","S-adenosylmethionine carrier 1","protein_coding"
"Cre16.g688050","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 4B1","protein_coding"
"Cre16.g690431","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g691450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g692004","No alias","Chlamydomonas reinhardtii","DNAJ heat shock family protein","protein_coding"
"Cre16.g695600","No alias","Chlamydomonas reinhardtii","DnaJ domain ;Myb-like DNA-binding domain","protein_coding"
"Cre17.g697950","No alias","Chlamydomonas reinhardtii","TLC ATP/ADP transporter","protein_coding"
"Cre17.g699150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g703450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g704550","No alias","Chlamydomonas reinhardtii","Integral membrane HRF1 family protein","protein_coding"
"Cre17.g706950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g711900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g719701","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g720528","No alias","Chlamydomonas reinhardtii","Actin-like ATPase superfamily protein","protein_coding"
"Cre17.g726400","No alias","Chlamydomonas reinhardtii","LAG1 homologue 2","protein_coding"
"Cre17.g727250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g728100","No alias","Chlamydomonas reinhardtii","Peptidase M20/M25/M40 family protein","protein_coding"
"Cre17.g729450","No alias","Chlamydomonas reinhardtii","chloride channel D","protein_coding"
"Cre17.g734150","No alias","Chlamydomonas reinhardtii","TIP41-like family protein","protein_coding"
"Cre17.g734564","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g734900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g743597","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g744447","No alias","Chlamydomonas reinhardtii","phosphate deficiency response 2","protein_coding"
"Cre17.g747547","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2015.19","No alias","Porphyridium purpureum","(at1g08540 : 99.4) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2030.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2031.16","No alias","Porphyridium purpureum","(at1g18070 : 402.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (q41803|ef1a_maize : 270.0) Elongation factor 1-alpha (EF-1-alpha) - Zea mays (Maize) & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2033.30","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 107.0) no description available & (at5g14460 : 97.8) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2033.9","No alias","Porphyridium purpureum","(q9s7u0|ino1_wheat : 637.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Triticum aestivum (Wheat) & (at2g22240 : 632.0) ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 2 (MIPS2); CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 1 (TAIR:AT4G39800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1264.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2042.6","No alias","Porphyridium purpureum","(at1g80300 : 497.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 496.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 986.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2044.11","No alias","Porphyridium purpureum","(at1g62740 : 98.6) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2048.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2064.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2088.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2092.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2093.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2122.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2150.3","No alias","Porphyridium purpureum","(at1g21640 : 358.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (q53ni2|nadk2_orysa : 343.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2154.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2199.1","No alias","Porphyridium purpureum","(at1g08490 : 463.0) Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental  sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation.; chloroplastic NIFS-like cysteine desulfurase (CPNIFS); FUNCTIONS IN: transaminase activity, selenocysteine lyase activity, cysteine desulfurase activity; INVOLVED IN: iron incorporation into metallo-sulfur cluster, response to selenium ion, sulfur metabolic process, selenium metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Cysteine desulfurase, SufS (InterPro:IPR010970), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: nitrogen fixation S (NIFS)-like 1 (TAIR:AT5G65720.1); Has 22660 Blast hits to 22653 proteins in 2897 species: Archae - 350; Bacteria - 15408; Metazoa - 379; Fungi - 404; Plants - 268; Viruses - 1; Other Eukaryotes - 5850 (source: NCBI BLink). & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2246.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2274.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2295.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2340.3","No alias","Porphyridium purpureum","(at5g26180 : 92.4) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 8801 Blast hits to 8742 proteins in 2315 species: Archae - 360; Bacteria - 6022; Metazoa - 655; Fungi - 388; Plants - 256; Viruses - 1; Other Eukaryotes - 1119 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.3","No alias","Porphyridium purpureum","(at1g79930 : 429.0) encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock; heat shock protein 91 (HSP91); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p24067|bip2_maize : 209.0) Luminal-binding protein 2 precursor (BiP2) (Heat shock protein 70 homolog 2) (B70) (B-70) - Zea mays (Maize) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2501.2","No alias","Porphyridium purpureum","(at2g25070 : 170.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G31860.1); Has 7077 Blast hits to 6871 proteins in 489 species: Archae - 6; Bacteria - 362; Metazoa - 1785; Fungi - 803; Plants - 2775; Viruses - 7; Other Eukaryotes - 1339 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2504.5","No alias","Porphyridium purpureum","(at1g62180 : 332.0) encodes a adenosine 5'-phosphosulfate reductase, involved in sulfate assimilation. Is a major effect locus for natural variation of shoot sulfate content in Arabidopsis.; 5'adenylylphosphosulfate reductase 2 (APR2); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2505.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3385.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3407.1","No alias","Porphyridium purpureum","(at5g36230 : 175.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68872 : 124.0) no description available & (gnl|cdd|39774 : 82.9) no description available & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3416.11","No alias","Porphyridium purpureum","(at2g27200 : 168.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G08410.1); Has 7321 Blast hits to 7198 proteins in 1972 species: Archae - 116; Bacteria - 4700; Metazoa - 639; Fungi - 504; Plants - 290; Viruses - 0; Other Eukaryotes - 1072 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3441.16","No alias","Porphyridium purpureum","(at3g43230 : 118.0) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT1G29800.1); Has 4080 Blast hits to 3974 proteins in 331 species: Archae - 0; Bacteria - 230; Metazoa - 2175; Fungi - 711; Plants - 392; Viruses - 3; Other Eukaryotes - 569 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3451.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3468.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3506.4","No alias","Porphyridium purpureum","(at5g48030 : 218.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q04960|dnjh_cucsa : 151.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3524.12","No alias","Porphyridium purpureum","(q9mt28|thrc_soltu : 587.0) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (at4g29840 : 579.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3555.3","No alias","Porphyridium purpureum","(at5g12130 : 172.0) PIGMENT DEFECTIVE 149 (PDE149); CONTAINS InterPro DOMAIN/s: Integral membrane protein TerC (InterPro:IPR005496), Integral membrane protein TerC, riboswitch-linked (InterPro:IPR022369); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3698.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4447.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4470.4","No alias","Porphyridium purpureum","(at4g12120 : 115.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 109.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4489.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4492.1","No alias","Porphyridium purpureum","(at4g08550 : 107.0) electron carriers;protein disulfide oxidoreductases; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: glutaredoxin-related (TAIR:AT3G11920.1); Has 5684 Blast hits to 4425 proteins in 725 species: Archae - 19; Bacteria - 1130; Metazoa - 1053; Fungi - 285; Plants - 562; Viruses - 105; Other Eukaryotes - 2530 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4509.1","No alias","Porphyridium purpureum","(at1g33320 : 182.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, cystathionine gamma-synthase activity, catalytic activity; INVOLVED IN: methionine biosynthetic process, cellular amino acid metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20280 Blast hits to 20270 proteins in 2456 species: Archae - 214; Bacteria - 11714; Metazoa - 220; Fungi - 816; Plants - 267; Viruses - 0; Other Eukaryotes - 7049 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_455.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4592.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4740.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_475.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_481.15","No alias","Porphyridium purpureum","(at1g71140 : 172.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_496.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_539.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_542.8","No alias","Porphyridium purpureum","(at5g08415 : 384.0) Radical SAM superfamily protein; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, lipoic acid synthase activity, iron-sulfur cluster binding, lipoate synthase activity, catalytic activity; INVOLVED IN: lipoic acid biosynthetic process, lipoate biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_544.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_588.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_699.3","No alias","Porphyridium purpureum","(at4g30330 : 90.5) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G18740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_703.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_782.1","No alias","Porphyridium purpureum","(at3g47450 : 109.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 102.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_978.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_981.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000017.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.6","No alias","Cyanophora paradoxa","(at2g17700 : 133.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.167","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000053.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000053.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000055.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.66","No alias","Cyanophora paradoxa","(at3g47730 : 380.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (reliability: 760.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000058.10","No alias","Cyanophora paradoxa","(at5g63890 : 219.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 217.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000073.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000079.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000079.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.128","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.254","No alias","Cyanophora paradoxa","(at4g27030 : 124.0) Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol.; fatty acid desaturase A (FADA); FUNCTIONS IN: Delta 3-trans hexadecenoic acid phosphatidylglycerol desaturase activity; INVOLVED IN: response to karrikin, phosphatidylglycerol metabolic process, unsaturated fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: Kua-ubiquitin conjugating enzyme hybrid localisation domain (TAIR:AT1G62190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000101.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.87","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.88","No alias","Cyanophora paradoxa","(at1g80300 : 174.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 174.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000113.89","No alias","Cyanophora paradoxa","(at1g80300 : 232.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 228.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000114.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000114.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000114.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000119.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000139.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000140.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.114","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.180","No alias","Cyanophora paradoxa","(at3g06580 : 315.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.22","No alias","Cyanophora paradoxa","(at4g39280 : 500.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (reliability: 1000.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.28","No alias","Cyanophora paradoxa","(at3g24190 : 353.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10148 Blast hits to 10096 proteins in 1818 species: Archae - 124; Bacteria - 4457; Metazoa - 440; Fungi - 485; Plants - 717; Viruses - 16; Other Eukaryotes - 3909 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.38","No alias","Cyanophora paradoxa","(at5g52920 : 432.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43117|kpya_ricco : 427.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000145.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.24","No alias","Cyanophora paradoxa","(at1g15500 : 427.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 424.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000158.14","No alias","Cyanophora paradoxa","(at1g67820 : 123.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000169.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000189.32","No alias","Cyanophora paradoxa","(at1g04600 : 478.0) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (reliability: 952.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000190.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000194.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000194.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000202.6","No alias","Cyanophora paradoxa","(at1g66340 : 158.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o49230|etr1_braol : 157.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000203.27","No alias","Cyanophora paradoxa","(at5g10980 : 264.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 262.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.104","No alias","Cyanophora paradoxa","(at5g38560 : 130.0) Protein kinase superfamily protein; FUNCTIONS IN: structural constituent of cell wall, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Pistil-specific extensin-like protein (InterPro:IPR003882), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 112.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000217.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.43","No alias","Cyanophora paradoxa","(at3g04870 : 558.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9ztp4|zds_maize : 541.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Zea mays (Maize) & (reliability: 1116.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.51","No alias","Cyanophora paradoxa","(at4g01800 : 515.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q36795|seca_spiol : 514.0) Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 1030.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.71","No alias","Cyanophora paradoxa","(at3g17040 : 170.0) It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis.; high chlorophyll fluorescent 107 (HCF107); FUNCTIONS IN: binding; INVOLVED IN: plastid organization, RNA processing, regulation of translation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: pre-mRNA splicing factor-related (TAIR:AT4G03430.1). & (q9fns4|mbb1_chlre : 159.0) PsbB mRNA maturation factor Mbb1, chloroplast precursor - Chlamydomonas reinhardtii & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.34","No alias","Cyanophora paradoxa","(q9zrj4|tba_chlvu : 777.0) Tubulin alpha chain - Chlorella vulgaris (Green alga) & (at1g50010 : 763.0) Encodes alpha-2,4 tubulin.  TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1526.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000237.4","No alias","Cyanophora paradoxa","(at2g40840 : 185.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity.   It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins.  On the other hand, arabinose and fructose were not efficiently used.  Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.108","No alias","Cyanophora paradoxa","(at1g17280 : 149.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.121","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.47","No alias","Cyanophora paradoxa","(at2g42640 : 100.0) Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Mitogen activated protein kinase kinase kinase-related (TAIR:AT3G58640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.57","No alias","Cyanophora paradoxa","(at5g59750 : 173.0) DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.89","No alias","Cyanophora paradoxa","(at3g24290 : 174.0) ammonium transporter 1;5 (AMT1;5); FUNCTIONS IN: ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: root epidermis, root hair, root tip; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;3 (TAIR:AT3G24300.1); Has 11447 Blast hits to 11429 proteins in 2045 species: Archae - 224; Bacteria - 4622; Metazoa - 402; Fungi - 429; Plants - 468; Viruses - 0; Other Eukaryotes - 5302 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000248.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.109","No alias","Cyanophora paradoxa","(at1g14700 : 112.0) purple acid phosphatase 3 (PAP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 8 (TAIR:AT2G01890.1); Has 1092 Blast hits to 1082 proteins in 272 species: Archae - 0; Bacteria - 250; Metazoa - 335; Fungi - 8; Plants - 191; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.127","No alias","Cyanophora paradoxa","(at5g11100 : 99.0) SYTD; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G05500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.52","No alias","Cyanophora paradoxa","(at3g17205 : 363.0) ubiquitin protein ligase 6 (UPL6); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 7 (TAIR:AT3G53090.2). & (reliability: 726.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000269.102","No alias","Cyanophora paradoxa","(at5g64840 : 302.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000317.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000331.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000334.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000334.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000339.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.56","No alias","Cyanophora paradoxa","(p23525|in37_spiol : 246.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 236.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane.  Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.17","No alias","Cyanophora paradoxa","(at1g36180 : 1013.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2026.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.48","No alias","Cyanophora paradoxa","(at4g23860 : 88.6) PHD finger protein-related; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, N-recognin (InterPro:IPR003126); Has 484 Blast hits to 449 proteins in 164 species: Archae - 0; Bacteria - 2; Metazoa - 240; Fungi - 124; Plants - 56; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000361.5","No alias","Cyanophora paradoxa","(p94026|rbcmt_tobac : 131.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 120.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000367.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000378.23","No alias","Cyanophora paradoxa","(p42856|zb14_maize : 127.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (at3g56490 : 126.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; HIS triad family protein 3 (HIT3); FUNCTIONS IN: protein kinase C binding, adenylylsulfatase activity, zinc ion binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 7957 Blast hits to 7956 proteins in 2592 species: Archae - 148; Bacteria - 4849; Metazoa - 343; Fungi - 139; Plants - 127; Viruses - 0; Other Eukaryotes - 2351 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.31","No alias","Cyanophora paradoxa","(at5g19760 : 227.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000385.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000385.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.17","No alias","Cyanophora paradoxa","(at3g52200 : 128.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000402.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.87","No alias","Cyanophora paradoxa","(at1g28140 : 98.6) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000404.44","No alias","Cyanophora paradoxa","(p35493|pmgi_ricco : 160.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Ricinus communis (Castor bean) & (at3g08590 : 154.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Metalloenzyme (InterPro:IPR006124), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000404.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000411.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.24","No alias","Cyanophora paradoxa","(p28644|roc1_spiol : 96.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (at5g50250 : 87.0) Encodes a RNA binding protein.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).  Supports editing of specific CP31A-dependent sites.; chloroplast RNA-binding protein 31B (CP31B); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, innate immune response; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: 31-kDa RNA binding protein (TAIR:AT4G24770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000441.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000444.17","No alias","Cyanophora paradoxa","(at1g79050 : 281.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000448.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000449.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000471.15","No alias","Cyanophora paradoxa","(at1g63050 : 163.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G12640.1); Has 1074 Blast hits to 1071 proteins in 250 species: Archae - 0; Bacteria - 147; Metazoa - 624; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000473.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000473.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000478.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000478.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.49","No alias","Cyanophora paradoxa","(at2g22660 : 82.4) Protein of unknown function (duplicated DUF1399); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT4G37900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000480.51","No alias","Cyanophora paradoxa","(at5g17660 : 112.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000489.7","No alias","Cyanophora paradoxa","(at2g39090 : 151.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.10","No alias","Cyanophora paradoxa","(at4g37900 : 115.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.40","No alias","Cyanophora paradoxa","(at4g33760 : 132.0) tRNA synthetase class II (D, K and N) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (InterPro:IPR004524), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal (InterPro:IPR018153), GAD domain (InterPro:IPR004115); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.41","No alias","Cyanophora paradoxa","(at4g33760 : 192.0) tRNA synthetase class II (D, K and N) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (InterPro:IPR004524), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal (InterPro:IPR018153), GAD domain (InterPro:IPR004115); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.45","No alias","Cyanophora paradoxa","(at1g15500 : 444.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 432.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 888.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000532.8","No alias","Cyanophora paradoxa","(at4g35470 : 135.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 91.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000553.17","No alias","Cyanophora paradoxa","(at4g17740 : 94.7) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9160 Blast hits to 9150 proteins in 1973 species: Archae - 0; Bacteria - 5658; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000553.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.44","No alias","Cyanophora paradoxa","(at4g00370 : 107.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000571.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.4","No alias","Cyanophora paradoxa","(at1g12940 : 105.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000581.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000607.15","No alias","Cyanophora paradoxa","(at3g55400 : 228.0) OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins in 3001 species: Archae - 930; Bacteria - 15835; Metazoa - 410; Fungi - 530; Plants - 181; Viruses - 3; Other Eukaryotes - 7011 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.2","No alias","Cyanophora paradoxa","(at5g23110 : 81.3) Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.8","No alias","Cyanophora paradoxa","(p28734|aatc_dauca : 404.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 397.0) Encodes the chloroplastic isozyme of aspartate aminotransferase.  Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.81","No alias","Cyanophora paradoxa","(at3g02470 : 189.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (q96471|dcam_iponi : 189.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000622.16","No alias","Cyanophora paradoxa","(at5g58140 : 93.2) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation.  Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00000655.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000655.57","No alias","Cyanophora paradoxa","(at3g10350 : 103.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000670.7","No alias","Cyanophora paradoxa","(at3g54110 : 87.4) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism.  Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.; plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000691.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000711.19","No alias","Cyanophora paradoxa","(at3g06950 : 130.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G34150.1); Has 9137 Blast hits to 9127 proteins in 2768 species: Archae - 169; Bacteria - 5633; Metazoa - 320; Fungi - 238; Plants - 169; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.67","No alias","Cyanophora paradoxa","(at4g13590 : 119.0) Uncharacterized protein family (UPF0016); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G64150.1). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.1","No alias","Cyanophora paradoxa","(at2g34660 : 358.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.2","No alias","Cyanophora paradoxa","(at2g34660 : 171.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000718.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000718.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.1","No alias","Cyanophora paradoxa","(at3g15380 : 87.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000737.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000741.4","No alias","Cyanophora paradoxa","(at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 375.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000760.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.12","No alias","Cyanophora paradoxa","(at2g01320 : 187.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.11","No alias","Cyanophora paradoxa","(at5g19740 : 309.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.19","No alias","Cyanophora paradoxa","(at5g48570 : 102.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 100.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000796.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000802.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000802.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.53","No alias","Cyanophora paradoxa","(at1g54220 : 333.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000821.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000821.9","No alias","Cyanophora paradoxa","(at1g67730 : 151.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.10","No alias","Cyanophora paradoxa","(at1g07710 : 103.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.20","No alias","Cyanophora paradoxa","(at1g50240 : 377.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 130.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000849.21","No alias","Cyanophora paradoxa","(at1g53490 : 95.9) RING/U-box superfamily protein; Has 175 Blast hits to 173 proteins in 83 species: Archae - 2; Bacteria - 14; Metazoa - 69; Fungi - 24; Plants - 38; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 191.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000851.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000851.17","No alias","Cyanophora paradoxa","(at5g13280 : 372.0) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety  of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH).; aspartate kinase 1 (AK-LYS1); FUNCTIONS IN: aspartate kinase activity; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49080|akh2_maize : 152.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000852.42","No alias","Cyanophora paradoxa","(at1g08840 : 150.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000852.43","No alias","Cyanophora paradoxa","(at1g08840 : 113.0) embryo defective 2411 (emb2411); FUNCTIONS IN: ATP-dependent DNA helicase activity, DNA binding, ATP binding; INVOLVED IN: DNA replication, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD/REP type (InterPro:IPR000212), DNA replication factor Dna2 (InterPro:IPR014808); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000857.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.40","No alias","Cyanophora paradoxa","(at2g20190 : 85.1) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion.  It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.27","No alias","Cyanophora paradoxa","(at5g01220 : 239.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 2 (SQD2); FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G59070.1); Has 35941 Blast hits to 35876 proteins in 3155 species: Archae - 1250; Bacteria - 26211; Metazoa - 142; Fungi - 236; Plants - 1690; Viruses - 2; Other Eukaryotes - 6410 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000880.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000889.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000903.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.22","No alias","Cyanophora paradoxa","(at5g08650 : 735.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9fe64|efgm_orysa : 84.7) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 1470.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000939.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.23","No alias","Cyanophora paradoxa","(at2g47760 : 220.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.24","No alias","Cyanophora paradoxa","(at2g47760 : 85.1) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.29","No alias","Cyanophora paradoxa","(at5g20270 : 125.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane  protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000980.16","No alias","Cyanophora paradoxa","(at1g07670 : 240.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qy12|aca4_orysa : 187.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000981.18","No alias","Cyanophora paradoxa","(at1g18180 : 140.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G73650.3); Has 2065 Blast hits to 2065 proteins in 348 species: Archae - 0; Bacteria - 501; Metazoa - 79; Fungi - 152; Plants - 110; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000983.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000983.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000984.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.2","No alias","Cyanophora paradoxa","(at3g62700 : 106.0) member of MRP subfamily; multidrug resistance-associated protein 10 (MRP10); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 4 (TAIR:AT2G47800.1); Has 708251 Blast hits to 364353 proteins in 4024 species: Archae - 13144; Bacteria - 571430; Metazoa - 13503; Fungi - 8752; Plants - 6721; Viruses - 16; Other Eukaryotes - 94685 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001024.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001027.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001029.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001038.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001041.24","No alias","Cyanophora paradoxa","(at3g17880 : 94.0) Encodes a thioredoxin-like disulfide reductase.  The protein interacts with the yeast Hsp70 protein Ssb2 in vitro.  This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (p80028|trxh_chlre : 88.6) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001049.35","No alias","Cyanophora paradoxa","(at1g55150 : 476.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 338.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 952.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001057.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001057.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001065.29","No alias","Cyanophora paradoxa","(at2g34490 : 88.2) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze the conversion of both 24-<i>epi</i>-campesterol and &beta;-sitosterol to brassicasterol and stigmasterol, respectively, in the presence of NADPH.; cytochrome P450, family 710, subfamily A, polypeptide 2 (CYP710A2); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 1 (TAIR:AT2G34500.1); Has 26372 Blast hits to 26256 proteins in 1476 species: Archae - 47; Bacteria - 2960; Metazoa - 10471; Fungi - 4624; Plants - 7423; Viruses - 0; Other Eukaryotes - 847 (source: NCBI BLink). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001065.30","No alias","Cyanophora paradoxa","(at2g34500 : 140.0) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of &beta;-sitosterol to stigmasterol, but not that of 24-<i>epi</i>-campesterol to brassicasterol (unlike CYP710A2).; cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001067.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.6","No alias","Cyanophora paradoxa","(p04690|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain - Chlamydomonas reinhardtii & (at5g62700 : 726.0) encodes tubulin beta-2/beta-3 chain; tubulin beta chain 3 (TUB3); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to cold; LOCATED IN: tubulin complex, cell wall; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 2 (TAIR:AT5G62690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001073.11","No alias","Cyanophora paradoxa","(at3g27325 : 118.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001073.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001085.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001093.1","No alias","Cyanophora paradoxa","(at5g39710 : 179.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 152.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001093.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001093.21","No alias","Cyanophora paradoxa","(p49085|psy_maize : 308.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Zea mays (Maize) & (at5g17230 : 306.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001094.27","No alias","Cyanophora paradoxa","(at5g16300 : 82.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001094.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001098.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001110.8","No alias","Cyanophora paradoxa","(at5g67220 : 261.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001126.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001126.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001126.4","No alias","Cyanophora paradoxa","(at5g49890 : 120.0) member of Anion channel protein family; chloride channel C (CLC-C); FUNCTIONS IN: anion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, intracellular, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); BEST Arabidopsis thaliana protein match is: Voltage-gated chloride channel family protein (TAIR:AT5G33280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001126.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001127.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001128.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.41","No alias","Cyanophora paradoxa","(at5g58140 : 112.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation.  Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (q67ux0|ado2_orysa : 84.0) Putative adagio-like protein 2 - Oryza sativa (Rice) & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001164.12","No alias","Cyanophora paradoxa","(at3g43210 : 85.9) Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.; TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001164.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001187.17","No alias","Cyanophora paradoxa","(at5g52570 : 113.0) Converts &#946;-carotene to zeaxanthin via cryptoxanthin.; beta-carotene hydroxylase 2 (BETA-OHASE 2); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: beta-hydroxylase 1 (TAIR:AT4G25700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001187.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001187.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001222.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001224.18","No alias","Cyanophora paradoxa","(at3g26060 : 110.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001231.6","No alias","Cyanophora paradoxa","(at1g71840 : 114.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 91198 Blast hits to 35247 proteins in 911 species: Archae - 70; Bacteria - 10066; Metazoa - 38021; Fungi - 19388; Plants - 11732; Viruses - 0; Other Eukaryotes - 11921 (source: NCBI BLink). & (q39336|gblp_brana : 96.3) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001234.18","No alias","Cyanophora paradoxa","(at5g50960 : 322.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C.  Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001253.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001258.10","No alias","Cyanophora paradoxa","(at1g57770 : 107.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001284.4","No alias","Cyanophora paradoxa","(at5g22130 : 93.2) member of Glycosyltransferase Family- 50; PEANUT 1 (PNT1); FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups, alpha-1,4-mannosyltransferase activity; INVOLVED IN: GPI anchor biosynthetic process, cellulose biosynthetic process, plant-type cell wall biogenesis, embryo development, cell division; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, DXD (InterPro:IPR007704). & (q500w7|pigm_arath : 93.2) GPI mannosyltransferase 1 (EC 2.4.1.-) (GPI mannosyltransferase I) (GPI-MT-I) (Phosphatidylinositol-glycan biosynthesis class M protein) (PIG-M) (Protein PEANUT1) - Arabidopsis thaliana (Mouse-ear cress) & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001284.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001299.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001302.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001339.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001339.14","No alias","Cyanophora paradoxa","(at4g24520 : 87.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (q05001|ncpr_catro : 83.6) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001343.3","No alias","Cyanophora paradoxa","(at4g17140 : 125.0) pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001365.9","No alias","Cyanophora paradoxa","(at1g73020 : 99.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001368.12","No alias","Cyanophora paradoxa","(at1g04420 : 203.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (q40648|kcab_orysa : 80.9) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001384.5","No alias","Cyanophora paradoxa","(q9sbw3|pp2a4_orysa : 503.0) Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (at1g10430 : 498.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001408.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001408.12","No alias","Cyanophora paradoxa","(at2g40840 : 591.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity.   It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins.  On the other hand, arabinose and fructose were not efficiently used.  Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of &#946;-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 87.8) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 1182.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001415.3","No alias","Cyanophora paradoxa","(at4g39460 : 107.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001415.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001443.2","No alias","Cyanophora paradoxa","(at5g06140 : 140.0) Homolog of yeast retromer subunit VPS5.  Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001486.8","No alias","Cyanophora paradoxa","(at1g65440 : 311.0) Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.; global transcription factor group B1 (GTB1); FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: chromatin assembly or disassembly, transcription initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt6 (TAIR:AT1G63210.1). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001493.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001493.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001497.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001537.12","No alias","Cyanophora paradoxa","(o22437|chld_pea : 446.0) Magnesium-chelatase subunit chlD, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) - Pisum sativum (Garden pea) & (at1g08520 : 440.0) Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.; ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink). & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001542.16","No alias","Cyanophora paradoxa","(at3g15380 : 208.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001576.14","No alias","Cyanophora paradoxa","(at5g52520 : 231.0) OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001576.15","No alias","Cyanophora paradoxa","(at5g52520 : 301.0) OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001590.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001604.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001623.7","No alias","Cyanophora paradoxa","(at4g32840 : 245.0) phosphofructokinase 6 (PFK6); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 1 (TAIR:AT4G29220.1); Has 8046 Blast hits to 7506 proteins in 2189 species: Archae - 28; Bacteria - 5254; Metazoa - 679; Fungi - 399; Plants - 394; Viruses - 4; Other Eukaryotes - 1288 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001668.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001668.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001669.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001718.6","No alias","Cyanophora paradoxa","(at2g20420 : 210.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (q6k9n6|sucb_orysa : 209.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001729.6","No alias","Cyanophora paradoxa","(at1g30400 : 253.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020509.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020528.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.19","No alias","Cyanophora paradoxa","(q40545|kpya_tobac : 207.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Nicotiana tabacum (Common tobacco) & (at3g22960 : 206.0) encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.; PKP-ALPHA; FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, lipid metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10289 Blast hits to 10239 proteins in 2715 species: Archae - 167; Bacteria - 6049; Metazoa - 538; Fungi - 221; Plants - 529; Viruses - 0; Other Eukaryotes - 2785 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020537.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020538.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.171","No alias","Cyanophora paradoxa","(p53535|phsl2_soltu : 271.0) Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplast precursor (EC 2.4.1.1) (Starch phosphorylase L-2) - Solanum tuberosum (Potato) & (at3g46970 : 259.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.71","No alias","Cyanophora paradoxa","(at3g13800 : 197.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2805 Blast hits to 2783 proteins in 774 species: Archae - 62; Bacteria - 1390; Metazoa - 7; Fungi - 23; Plants - 100; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.153","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.45","No alias","Cyanophora paradoxa","(q07176|mmk1_medsa : 233.0) Mitogen-activated protein kinase homolog MMK1 (EC 2.7.11.24) (MAP kinase MSK7) (MAP kinase ERK1) - Medicago sativa (Alfalfa) & (at2g43790 : 227.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020557.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020560.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.107","No alias","Cyanophora paradoxa","(at5g10050 : 105.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.111","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.113","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.148","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.187","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020564.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020567.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020572.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020592.56","No alias","Cyanophora paradoxa","(at2g26590 : 92.4) regulatory particle non-ATPase 13 (RPN13); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell adhesion; LOCATED IN: integral to membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome complex ubiquitin receptor, subunit Rpn13 (InterPro:IPR006773); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020603.39","No alias","Cyanophora paradoxa","(at1g64780 : 282.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.110","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.130","No alias","Cyanophora paradoxa","(at1g43190 : 385.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.81","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020611.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.111","No alias","Cyanophora paradoxa","(at1g03445 : 265.0) encodes a serine/threonine protein phosphatase with an N-terminal Kelch-repeat domain, which is nuclear localized and expressed preferentially in elongating cells. Genetic evidence suggest that this gene plays a redundant role (along with other members of the same gene family) in modulating growth in response to brassinosteroid.; BRI1 SUPPRESSOR 1 (BSU1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of protein localization; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Metallophosphoesterase (InterPro:IPR004843), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: BRI1 suppressor 1 (BSU1)-like 1 (TAIR:AT4G03080.1); Has 12351 Blast hits to 9811 proteins in 679 species: Archae - 82; Bacteria - 604; Metazoa - 4121; Fungi - 2161; Plants - 2580; Viruses - 7; Other Eukaryotes - 2796 (source: NCBI BLink). & (q2qm47|bsl2_orysa : 258.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.59","No alias","Cyanophora paradoxa","(at1g17580 : 304.0) Encodes a member of the type XI myosin protein family involved in organelle trafficking and overall plant development.; myosin 1 (MYA1); FUNCTIONS IN: motor activity; INVOLVED IN: in 8 processes; LOCATED IN: myosin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.1); Has 18995 Blast hits to 13821 proteins in 1312 species: Archae - 114; Bacteria - 980; Metazoa - 11844; Fungi - 1348; Plants - 1046; Viruses - 13; Other Eukaryotes - 3650 (source: NCBI BLink). & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.123","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.149","No alias","Cyanophora paradoxa","(at1g65070 : 234.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020660.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020660.60","No alias","Cyanophora paradoxa","(at1g73020 : 86.7) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.1","No alias","Cyanophora paradoxa","(at3g55400 : 355.0) OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins in 3001 species: Archae - 930; Bacteria - 15835; Metazoa - 410; Fungi - 530; Plants - 181; Viruses - 3; Other Eukaryotes - 7011 (source: NCBI BLink). & (q9zts1|sym_orysa : 92.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.39","No alias","Cyanophora paradoxa","(at2g02500 : 213.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.52","No alias","Cyanophora paradoxa","(at2g25280 : 288.0) CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.19","No alias","Cyanophora paradoxa","(at1g68830 : 137.0) STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation; STT7 homolog STN7 (STN7); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: regulation of photosynthesis, light reaction, circadian rhythm; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 29571 Blast hits to 29413 proteins in 1565 species: Archae - 57; Bacteria - 3753; Metazoa - 11524; Fungi - 3757; Plants - 4496; Viruses - 50; Other Eukaryotes - 5934 (source: NCBI BLink). & (q84v18|stt7_chlre : 125.0) Serine/threonine-protein kinase stt7, chloroplast precursor (EC 2.7.11.1) - Chlamydomonas reinhardtii & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020697.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020703.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020703.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.120","No alias","Cyanophora paradoxa","(at2g31030 : 92.4) OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020710.121","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020725.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020734.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.3","No alias","Cyanophora paradoxa","(at5g24940 : 102.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.43","No alias","Cyanophora paradoxa","(at1g74040 : 127.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS2.  Involved in leucine biosynthesis.  Do not participate in the chain elongation of glucosinolates.  Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).; 2-isopropylmalate synthase 1 (IMS1); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase-like 4 (TAIR:AT1G18500.1); Has 16891 Blast hits to 16883 proteins in 2449 species: Archae - 499; Bacteria - 8886; Metazoa - 193; Fungi - 474; Plants - 279; Viruses - 0; Other Eukaryotes - 6560 (source: NCBI BLink). & (q39891|leu1_soybn : 117.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.7","No alias","Cyanophora paradoxa","(at1g80300 : 455.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 444.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 908.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020800.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.37","No alias","Cyanophora paradoxa","(at1g16540 : 335.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer.  Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 273.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020801.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020812.6","No alias","Cyanophora paradoxa","(at1g34065 : 119.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.119","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020830.122","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020830.34","No alias","Cyanophora paradoxa","(at3g13800 : 156.0) Metallo-hydrolase/oxidoreductase superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT1G30300.1); Has 2805 Blast hits to 2783 proteins in 774 species: Archae - 62; Bacteria - 1390; Metazoa - 7; Fungi - 23; Plants - 100; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.4","No alias","Cyanophora paradoxa","(at1g15500 : 136.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 132.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.5","No alias","Cyanophora paradoxa","(at1g15500 : 101.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 94.7) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.55","No alias","Cyanophora paradoxa","(at1g16720 : 103.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA.  Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits.  The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020849.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020878.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020878.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020903.12","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020903.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.167","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.168","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.57","No alias","Cyanophora paradoxa","(at4g10320 : 975.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (reliability: 1950.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.47","No alias","Cyanophora paradoxa","(at1g51720 : 366.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (q9lec8|dheb_nicpl : 171.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020911.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.31","No alias","Cyanophora paradoxa","(q8lki3|alb32_chlre : 203.0) Inner membrane ALBINO3-like protein 2, chloroplast precursor - Chlamydomonas reinhardtii & (at1g24490 : 184.0) Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.; ALBINA 4 (ALB4); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: 63 kDa inner membrane family protein (TAIR:AT2G28800.1); Has 8058 Blast hits to 8029 proteins in 2465 species: Archae - 0; Bacteria - 5573; Metazoa - 87; Fungi - 22; Plants - 115; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020927.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020930.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020930.14","No alias","Cyanophora paradoxa","(at3g58140 : 425.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020930.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020934.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020934.42","No alias","Cyanophora paradoxa","(at1g66340 : 122.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (o49230|etr1_braol : 122.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020941.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020941.40","No alias","Cyanophora paradoxa","(at5g12470 : 182.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020951.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020952.7","No alias","Cyanophora paradoxa","(at4g25960 : 162.0) P-glycoprotein 2 (PGP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 10 (TAIR:AT1G10680.1); Has 857619 Blast hits to 396855 proteins in 4207 species: Archae - 14871; Bacteria - 670687; Metazoa - 17931; Fungi - 12963; Plants - 9451; Viruses - 35; Other Eukaryotes - 131681 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 151.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020956.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020960.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.121","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.123","No alias","Cyanophora paradoxa","(at1g62680 : 142.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63130.1); Has 64113 Blast hits to 15255 proteins in 308 species: Archae - 5; Bacteria - 67; Metazoa - 910; Fungi - 1189; Plants - 59601; Viruses - 0; Other Eukaryotes - 2341 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.35","No alias","Cyanophora paradoxa","(at3g55010 : 176.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 174.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020964.23","No alias","Cyanophora paradoxa","(p53537|phsh_vicfa : 461.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Vicia faba (Broad bean) & (at3g46970 : 455.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020964.35","No alias","Cyanophora paradoxa","(at2g32950 : 280.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 276.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020965.3","No alias","Cyanophora paradoxa","(at1g04945 : 123.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.70","No alias","Cyanophora paradoxa","(q651u1|cryd_orysa : 216.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (at5g24850 : 212.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020999.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021012.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021012.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021013.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021036.20","No alias","Cyanophora paradoxa","(q53ni2|nadk2_orysa : 167.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 166.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021036.35","No alias","Cyanophora paradoxa","(at3g10370 : 268.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021036.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.47","No alias","Cyanophora paradoxa","(at5g52810 : 100.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021038.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021070.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021070.105","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021072.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021098.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021108.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021108.8","No alias","Cyanophora paradoxa","(at1g12940 : 148.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.110","No alias","Cyanophora paradoxa","(at2g44350 : 323.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (o80433|cisy_dauca : 323.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.187","No alias","Cyanophora paradoxa","(at3g02460 : 130.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: plant adhesion molecule 1 (TAIR:AT5G15930.1); Has 4815 Blast hits to 4807 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 2496; Fungi - 964; Plants - 519; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.189","No alias","Cyanophora paradoxa","(at3g23790 : 238.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.194","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.73","No alias","Cyanophora paradoxa","(q949m2|fabg4_brana : 91.7) 3-oxoacyl-[acyl-carrier-protein] reductase 4 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 4) (Fragment) - Brassica napus (Rape) & (at1g24360 : 81.3) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.40","No alias","Cyanophora paradoxa","(at2g44990 : 100.0) More Axillary Branching; carotenoid cleavage dioxygenases.; carotenoid cleavage dioxygenase 7 (CCD7); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 6 (TAIR:AT3G24220.1); Has 211 Blast hits to 206 proteins in 62 species: Archae - 2; Bacteria - 69; Metazoa - 8; Fungi - 31; Plants - 96; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021179.41","No alias","Cyanophora paradoxa","(at3g23510 : 317.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021179.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021222.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.5","No alias","Cyanophora paradoxa","(at1g51500 : 127.0) Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.; ECERIFERUM 5 (CER5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: wax biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 373832 Blast hits to 343583 proteins in 4060 species: Archae - 6936; Bacteria - 298137; Metazoa - 8223; Fungi - 6589; Plants - 5451; Viruses - 9; Other Eukaryotes - 48487 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 97.8) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021254.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021254.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021275.25","No alias","Cyanophora paradoxa","(q7g8y3|isw2_orysa : 367.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 365.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021281.39","No alias","Cyanophora paradoxa","(at1g13700 : 110.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021281.40","No alias","Cyanophora paradoxa","(p48621|fad3c_soybn : 202.0) Omega-3 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Glycine max (Soybean) & (at3g11170 : 195.0) Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.; fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021281.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021282.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021312.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021314.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021318.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021318.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021332.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.87","No alias","Cyanophora paradoxa","(at1g09680 : 93.6) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 56278 Blast hits to 14858 proteins in 304 species: Archae - 3; Bacteria - 59; Metazoa - 821; Fungi - 925; Plants - 52616; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021348.88","No alias","Cyanophora paradoxa","(at1g05670 : 159.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G01110.1); Has 76919 Blast hits to 23782 proteins in 722 species: Archae - 3; Bacteria - 657; Metazoa - 3612; Fungi - 1352; Plants - 68766; Viruses - 129; Other Eukaryotes - 2400 (source: NCBI BLink). & (q76c99|rf1_orysa : 147.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.15","No alias","Cyanophora paradoxa","(at1g80030 : 317.0) Molecular chaperone Hsp40/DnaJ family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT3G17830.1); Has 29578 Blast hits to 28478 proteins in 3517 species: Archae - 197; Bacteria - 11603; Metazoa - 4491; Fungi - 2484; Plants - 2799; Viruses - 20; Other Eukaryotes - 7984 (source: NCBI BLink). & (q04960|dnjh_cucsa : 112.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.7","No alias","Cyanophora paradoxa","(at5g26740 : 102.0) Protein of unknown function (DUF300); LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF300 (InterPro:IPR005178); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF300) (TAIR:AT3G05940.1); Has 921 Blast hits to 913 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 193; Plants - 245; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021357.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021357.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021357.7","No alias","Cyanophora paradoxa","(at3g49400 : 82.4) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00021373.6","No alias","Cyanophora paradoxa","(at3g26060 : 93.6) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (p80602|bas1_wheat : 84.3) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Triticum aestivum (Wheat) & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021373.7","No alias","Cyanophora paradoxa","(at3g45010 : 309.0) serine carboxypeptidase-like 48 (scpl48); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3550 Blast hits to 3457 proteins in 337 species: Archae - 0; Bacteria - 135; Metazoa - 672; Fungi - 884; Plants - 1462; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink). & (p37891|cbp3_orysa : 303.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.19","No alias","Cyanophora paradoxa","(at5g03650 : 804.0) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.; starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q08047|glgb_maize : 788.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 1608.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021432.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.48","No alias","Cyanophora paradoxa","(at2g14255 : 221.0) Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021438.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021462.2","No alias","Cyanophora paradoxa","(at5g53140 : 137.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021463.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.31","No alias","Cyanophora paradoxa","(at3g11945 : 117.0) Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate.  This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.; homogentisate prenyltransferase (HST); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate phytyltransferase 1 (TAIR:AT2G18950.1); Has 1367 Blast hits to 1364 proteins in 371 species: Archae - 252; Bacteria - 598; Metazoa - 1; Fungi - 4; Plants - 199; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021468.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021517.10","No alias","Cyanophora paradoxa","(at4g19210 : 820.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1640.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021522.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021522.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021525.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021531.14","No alias","Cyanophora paradoxa","(at3g27380 : 319.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion.  Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021571.37","No alias","Cyanophora paradoxa","(o04016|p5cr_actch : 259.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Actinidia chinensis (Kiwi) (Yangtao) & (at5g14800 : 252.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.12","No alias","Cyanophora paradoxa","(q8li34|myst1_orysa : 388.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (at5g64610 : 387.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also  display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4  reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.34","No alias","Cyanophora paradoxa","(at5g56760 : 224.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.; serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.39","No alias","Cyanophora paradoxa","(at5g06530 : 263.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 167.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.44","No alias","Cyanophora paradoxa","(at5g35840 : 84.3) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant  growth and development.; phytochrome C (PHYC); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome A (TAIR:AT1G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p36505|phy1_phypa : 84.0) Phytochrome 1 - Physcomitrella patens (Moss) & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.7","No alias","Cyanophora paradoxa","(at1g72700 : 213.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021603.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021616.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021623.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021717.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021719.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021726.12","No alias","Cyanophora paradoxa","(at1g05500 : 117.0) Encodes a endomembrane-localized synaptotagmin.  Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021742.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021742.6","No alias","Cyanophora paradoxa","(at1g45010 : 87.8) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35180.1); Has 219 Blast hits to 219 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 6; Plants - 93; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021759.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021795.13","No alias","Cyanophora paradoxa","(at1g73740 : 96.7) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 7866 Blast hits to 7866 proteins in 2456 species: Archae - 0; Bacteria - 5567; Metazoa - 4; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.63","No alias","Cyanophora paradoxa","(at3g19260 : 109.0) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism.; LAG1 homologue 2 (LOH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to molecule of fungal origin; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG1 longevity assurance homolog 3 (TAIR:AT1G13580.3); Has 1277 Blast hits to 1277 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 612; Fungi - 306; Plants - 183; Viruses - 3; Other Eukaryotes - 173 (source: NCBI BLink). & (q6eun0|ascl1_orysa : 95.1) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022104.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022104.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022104.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G005200","No alias","Glycine max","gamma-glutamyl transpeptidase 4","protein_coding"
"Glyma.01G017400","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.01G022800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G025500","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Glyma.01G054400","No alias","Glycine max","Protein of unknown function, DUF538","protein_coding"
"Glyma.01G062100","No alias","Glycine max","fructokinase-like 2","protein_coding"
"Glyma.01G069500","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.01G109700","No alias","Glycine max","fructokinase-like 1","protein_coding"
"Glyma.01G153600","No alias","Glycine max","xyloglucanase 113","protein_coding"
"Glyma.01G162800","No alias","Glycine max","aconitase 1","protein_coding"
"Glyma.01G206500","No alias","Glycine max","receptor-like protein kinase 1","protein_coding"
"Glyma.01G241600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G043900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.02G078700","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.02G116700","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.02G119700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.02G120400","No alias","Glycine max","Dihydropterin pyrophosphokinase / Dihydropteroate synthase","protein_coding"
"Glyma.02G126300","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.02G136000","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Glyma.02G150600","No alias","Glycine max","receptor-like kinase in in flowers 3","protein_coding"
"Glyma.02G223700","No alias","Glycine max","B-box type zinc finger protein with CCT domain","protein_coding"
"Glyma.02G229900","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.02G230900","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.02G241200","No alias","Glycine max","cytosolic NADP+-dependent isocitrate dehydrogenase","protein_coding"
"Glyma.02G243500","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.02G281200","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.02G299100","No alias","Glycine max","serine acetyltransferase 2;2","protein_coding"
"Glyma.02G308100","No alias","Glycine max","emp24/gp25L/p24 family/GOLD family protein","protein_coding"
"Glyma.03G002600","No alias","Glycine max","Ubiquitin carboxyl-terminal hydrolase family protein","protein_coding"
"Glyma.03G009100","No alias","Glycine max","Per1-like family protein","protein_coding"
"Glyma.03G070100","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Glyma.03G094200","No alias","Glycine max","like heterochromatin protein (LHP1)","protein_coding"
"Glyma.03G120900","No alias","Glycine max","Nascent polypeptide-associated complex (NAC), alpha subunit family protein","protein_coding"
"Glyma.03G150600","No alias","Glycine max","GTP binding Elongation factor Tu family protein","protein_coding"
"Glyma.03G172600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G184300","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.03G193000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.03G251700","No alias","Glycine max","Signal transduction histidine kinase, hybrid-type, ethylene sensor","protein_coding"
"Glyma.04G007400","No alias","Glycine max","FMN-linked oxidoreductases superfamily protein","protein_coding"
"Glyma.04G038400","No alias","Glycine max","Tic22-like family protein","protein_coding"
"Glyma.04G092700","No alias","Glycine max","Nitrogen regulatory PII-like, alpha/beta","protein_coding"
"Glyma.04G096200","No alias","Glycine max","GATA-type zinc finger protein with TIFY domain","protein_coding"
"Glyma.04G166300","No alias","Glycine max","CCT motif -containing response regulator protein","protein_coding"
"Glyma.04G178400","No alias","Glycine max","ADP-glucose pyrophosphorylase family protein","protein_coding"
"Glyma.04G213400","No alias","Glycine max","phosphatidylinositol 4-OH kinase beta1","protein_coding"
"Glyma.04G228500","No alias","Glycine max","plastid transcriptionally active 15","protein_coding"
"Glyma.04G231700","No alias","Glycine max","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Glyma.04G235800","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.04G247900","No alias","Glycine max","PDI-like 1-2","protein_coding"
"Glyma.04G249600","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding"
"Glyma.05G008800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.05G020900","No alias","Glycine max","glycine-rich RNA-binding protein 3","protein_coding"
"Glyma.05G025000","No alias","Glycine max","CCT motif -containing response regulator protein","protein_coding"
"Glyma.05G030100","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.05G045900","No alias","Glycine max","malate synthase","protein_coding"
"Glyma.05G052500","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.05G055100","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.05G056800","No alias","Glycine max","OSBP(oxysterol binding protein)-related protein 2A","protein_coding"
"Glyma.05G089400","No alias","Glycine max","potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein","protein_coding"
"Glyma.05G113300","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.05G115200","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.05G129100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G142300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.05G149100","No alias","Glycine max","Immunoglobulin E-set superfamily protein","protein_coding"
"Glyma.05G150300","No alias","Glycine max","Tic22-like family protein","protein_coding"
"Glyma.05G151000","No alias","Glycine max","Subtilase family protein","protein_coding"
"Glyma.05G157700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G159400","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.05G173000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G190700","No alias","Glycine max","TRICHOME BIREFRINGENCE-LIKE 7","protein_coding"
"Glyma.05G201500","No alias","Glycine max","Polynucleotide adenylyltransferase family protein","protein_coding"
"Glyma.05G208400","No alias","Glycine max","GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative","protein_coding"
"Glyma.05G245200","No alias","Glycine max","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Glyma.06G009100","No alias","Glycine max","salt tolerance homolog2","protein_coding"
"Glyma.06G033200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G061000","No alias","Glycine max","proton gradient regulation 3","protein_coding"
"Glyma.06G069700","No alias","Glycine max","overexpressor of cationic peroxidase 3","protein_coding"
"Glyma.06G085900","No alias","Glycine max","YebC-related","protein_coding"
"Glyma.06G092600","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.06G096000","No alias","Glycine max","MSCS-like 2","protein_coding"
"Glyma.06G118550","No alias","Glycine max","Chalcone and stilbene synthase family protein","protein_coding"
"Glyma.06G123700","No alias","Glycine max","pathogenesis-related family protein","protein_coding"
"Glyma.06G128900","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.06G137300","No alias","Glycine max","O-methyltransferase 1","protein_coding"
"Glyma.06G161900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.06G172900","No alias","Glycine max","embryo defective 2423","protein_coding"
"Glyma.06G186400","No alias","Glycine max","ADP-glucose pyrophosphorylase family protein","protein_coding"
"Glyma.06G235100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G236700","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.06G309500","No alias","Glycine max","Ribosomal L18p/L5e family protein","protein_coding"
"Glyma.06G311600","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.06G323200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G015000","No alias","Glycine max","nuclear poly(a) polymerase","protein_coding"
"Glyma.07G033100","No alias","Glycine max","nucleotide transporter 1","protein_coding"
"Glyma.07G033200","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.07G059800","No alias","Glycine max","glyoxylate reductase 1","protein_coding"
"Glyma.07G073500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G100500","No alias","Glycine max","B-S glucosidase 44","protein_coding"
"Glyma.07G102100","No alias","Glycine max","zinc finger (Ran-binding) family protein","protein_coding"
"Glyma.07G128100","No alias","Glycine max","arginine methyltransferase 11","protein_coding"
"Glyma.07G157800","No alias","Glycine max","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Glyma.07G166300","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.07G166400","No alias","Glycine max","chlororespiratory reduction 3","protein_coding"
"Glyma.07G197600","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.07G208400","No alias","Glycine max","5\'-3\' exonuclease family protein","protein_coding"
"Glyma.07G217000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.07G219300","No alias","Glycine max","phytanoyl-CoA dioxygenase (PhyH) family protein","protein_coding"
"Glyma.07G227100","No alias","Glycine max","Plant protein of unknown function (DUF863)","protein_coding"
"Glyma.07G250400","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.07G250900","No alias","Glycine max","CHY-type/CTCHY-type/RING-type Zinc finger protein","protein_coding"
"Glyma.07G260400","No alias","Glycine max","Met-10+ like family protein / kelch repeat-containing protein","protein_coding"
"Glyma.08G028000","No alias","Glycine max","Homeodomain-like transcriptional regulator","protein_coding"
"Glyma.08G050500","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.08G061900","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.08G067500","No alias","Glycine max","Inositol monophosphatase family protein","protein_coding"
"Glyma.08G067600","No alias","Glycine max","nicotinamidase 1","protein_coding"
"Glyma.08G086500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.08G087800","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.08G098100","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.08G105700","No alias","Glycine max","Immunoglobulin E-set superfamily protein","protein_coding"
"Glyma.08G125000","No alias","Glycine max","cytochrome P450, family 716, subfamily A, polypeptide 1","protein_coding"
"Glyma.08G135000","No alias","Glycine max","Ribosomal L29 family protein","protein_coding"
"Glyma.08G143500","No alias","Glycine max","alkaline/neutral invertase","protein_coding"
"Glyma.08G162000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G197100","No alias","Glycine max","peptidase M20/M25/M40 family protein","protein_coding"
"Glyma.08G209100","No alias","Glycine max","nucleotide transporter 1","protein_coding"
"Glyma.08G216900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G253800","No alias","Glycine max","DNA/RNA polymerases superfamily protein","protein_coding"
"Glyma.08G259500","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Glyma.08G262800","No alias","Glycine max","alpha-xylosidase 1","protein_coding"
"Glyma.08G283700","No alias","Glycine max","Pyruvate phosphate dikinase, PEP/pyruvate binding domain","protein_coding"
"Glyma.08G295700","No alias","Glycine max","AMP deaminase, putative / myoadenylate deaminase, putative","protein_coding"
"Glyma.08G302400","No alias","Glycine max","MIF4G domain-containing protein / MA3 domain-containing protein","protein_coding"
"Glyma.08G334000","No alias","Glycine max","alpha-glucan phosphorylase 2","protein_coding"
"Glyma.08G334500","No alias","Glycine max","maternal effect embryo arrest 59","protein_coding"
"Glyma.08G364000","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.08G366200","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.09G006400","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.09G013600","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.09G035700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G065900","No alias","Glycine max","matrix metalloproteinase","protein_coding"
"Glyma.09G088000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.09G089200","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.09G173800","No alias","Glycine max","receptor-like kinase 1","protein_coding"
"Glyma.09G178100","No alias","Glycine max","B-S glucosidase 44","protein_coding"
"Glyma.09G180400","No alias","Glycine max","Ribosomal protein S24/S35, mitochondrial","protein_coding"
"Glyma.09G234400","No alias","Glycine max","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Glyma.09G261902","No alias","Glycine max","SLOW GROWTH 1","protein_coding"
"Glyma.09G263800","No alias","Glycine max","SET domain-containing protein","protein_coding"
"Glyma.09G272000","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.09G283400","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.10G005100","No alias","Glycine max","differentiation and greening-like 1","protein_coding"
"Glyma.10G013700","No alias","Glycine max","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"Glyma.10G047800","No alias","Glycine max","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Glyma.10G058800","No alias","Glycine max","Major facilitator superfamily protein","protein_coding"
"Glyma.10G144600","No alias","Glycine max","shaggy-related kinase 11","protein_coding"
"Glyma.10G156100","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Glyma.10G224100","No alias","Glycine max","thioredoxin Y1","protein_coding"
"Glyma.10G247700","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.10G251500","No alias","Glycine max","thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)","protein_coding"
"Glyma.10G255500","No alias","Glycine max","tubulin alpha-2 chain","protein_coding"
"Glyma.10G261400","No alias","Glycine max","D-3-phosphoglycerate dehydrogenase","protein_coding"
"Glyma.11G053700","No alias","Glycine max","Cystathionine beta-synthase (CBS) family protein","protein_coding"
"Glyma.11G080600","No alias","Glycine max","aconitase 1","protein_coding"
"Glyma.11G081400","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.11G087500","No alias","Glycine max","Seven transmembrane MLO family protein","protein_coding"
"Glyma.11G089900","No alias","Glycine max","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"Glyma.11G103500","No alias","Glycine max","cell elongation protein / DWARF1 / DIMINUTO (DIM)","protein_coding"
"Glyma.11G110800","No alias","Glycine max","ATP binding microtubule motor family protein","protein_coding"
"Glyma.11G117600","No alias","Glycine max","cold, circadian rhythm, and rna binding 2","protein_coding"
"Glyma.11G149600","No alias","Glycine max","high chlorophyll fluorescence 153","protein_coding"
"Glyma.11G155300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G171300","No alias","Glycine max","Plant protein of unknown function (DUF828)","protein_coding"
"Glyma.11G175700","No alias","Glycine max","histone mono-ubiquitination 1","protein_coding"
"Glyma.11G185200","No alias","Glycine max","Jojoba acyl CoA reductase-related male sterility protein","protein_coding"
"Glyma.11G216100","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.11G225200","No alias","Glycine max","ROP guanine nucleotide exchange factor 5","protein_coding"
"Glyma.11G244700","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.12G024700","No alias","Glycine max","rotamase CYP 3","protein_coding"
"Glyma.12G026000","No alias","Glycine max","Metal-dependent phosphohydrolase","protein_coding"
"Glyma.12G036700","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Glyma.12G043100","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding"
"Glyma.12G093300","No alias","Glycine max","Protein of unknown function (DUF1279)","protein_coding"
"Glyma.12G118200","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.12G157500","No alias","Glycine max","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein","protein_coding"
"Glyma.12G158900","No alias","Glycine max","TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3","protein_coding"
"Glyma.12G214300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G239300","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.13G002100","No alias","Glycine max","with no lysine (K) kinase 8","protein_coding"
"Glyma.13G060802","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.13G097800","No alias","Glycine max","homogentisate phytyltransferase 1","protein_coding"
"Glyma.13G131600","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.13G140700","No alias","Glycine max","Pyridoxal-dependent decarboxylase family protein","protein_coding"
"Glyma.13G145200","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.13G171100","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.13G212900","No alias","Glycine max","inosine-uridine preferring nucleoside hydrolase family protein","protein_coding"
"Glyma.13G220450","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.13G287300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G362300","No alias","Glycine max","nucleotide transporter 1","protein_coding"
"Glyma.14G043400","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.14G046700","No alias","Glycine max","RmlC-like cupins superfamily protein","protein_coding"
"Glyma.14G060500","No alias","Glycine max","ethylene-dependent gravitropism-deficient and yellow-green-like 2","protein_coding"
"Glyma.14G061300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.14G102600","No alias","Glycine max","ATP-dependent caseinolytic (Clp) protease/crotonase family protein","protein_coding"
"Glyma.14G193700","No alias","Glycine max","ELF4-like 1","protein_coding"
"Glyma.14G197900","No alias","Glycine max","CCT motif family protein","protein_coding"
"Glyma.14G211000","No alias","Glycine max","cytosolic NADP+-dependent isocitrate dehydrogenase","protein_coding"
"Glyma.15G011500","No alias","Glycine max","nucleotide transporter 1","protein_coding"
"Glyma.15G044700","No alias","Glycine max","vacuolar proton ATPase A1","protein_coding"
"Glyma.15G064300","No alias","Glycine max","plastid developmental protein DAG, putative","protein_coding"
"Glyma.15G067200","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.15G089500","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.15G103100","No alias","Glycine max","mitochondrial editing factor  18","protein_coding"
"Glyma.15G111400","No alias","Glycine max","Chaperonin-like RbcX protein","protein_coding"
"Glyma.15G118300","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.15G137900","No alias","Glycine max","Translation elongation  factor EF1B/ribosomal protein S6 family protein","protein_coding"
"Glyma.15G154200","No alias","Glycine max","CW-type Zinc Finger","protein_coding"
"Glyma.15G178400","No alias","Glycine max","aldehyde dehydrogenase 7B4","protein_coding"
"Glyma.15G254900","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.15G265600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G049000","No alias","Glycine max","CCR-like","protein_coding"
"Glyma.16G049700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G050900","No alias","Glycine max","B-box type zinc finger protein with CCT domain","protein_coding"
"Glyma.16G099700","No alias","Glycine max","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding"
"Glyma.16G115800","No alias","Glycine max","diacylglycerol acyltransferase family","protein_coding"
"Glyma.16G153000","No alias","Glycine max","NDH-dependent cyclic electron flow 5","protein_coding"
"Glyma.16G177300","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.16G177800","No alias","Glycine max","Protein of unknown function (DUF3464)","protein_coding"
"Glyma.16G214800","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.17G006500","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.17G066200","No alias","Glycine max","xylose isomerase family protein","protein_coding"
"Glyma.17G071600","No alias","Glycine max","DNA/RNA polymerases superfamily protein","protein_coding"
"Glyma.17G099500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.17G102200","No alias","Glycine max","CCT motif -containing response regulator protein","protein_coding"
"Glyma.17G127700","No alias","Glycine max","Putative endonuclease or glycosyl hydrolase","protein_coding"
"Glyma.17G128500","No alias","Glycine max","RNA-metabolising metallo-beta-lactamase family protein","protein_coding"
"Glyma.17G134500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.17G153900","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.17G178800","No alias","Glycine max","sucrose nonfermenting 1(SNF1)-related protein kinase 2.3","protein_coding"
"Glyma.17G187600","No alias","Glycine max","dehydrin family protein","protein_coding"
"Glyma.17G218000","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.17G254100","No alias","Glycine max","beta-galactosidase 5","protein_coding"
"Glyma.17G255300","No alias","Glycine max","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Glyma.18G042200","No alias","Glycine max","transmembrane kinase 1","protein_coding"
"Glyma.18G055966","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.18G065700","No alias","Glycine max","thiaminC","protein_coding"
"Glyma.18G067500","No alias","Glycine max","maternal effect embryo arrest 59","protein_coding"
"Glyma.18G132200","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.18G132900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G137100","No alias","Glycine max","spermidine synthase 1","protein_coding"
"Glyma.18G139100","No alias","Glycine max","pantothenate kinase 2","protein_coding"
"Glyma.18G142500","No alias","Glycine max","Pyruvate phosphate dikinase, PEP/pyruvate binding domain","protein_coding"
"Glyma.18G188800","No alias","Glycine max","Protein of unknown function (DUF3411)","protein_coding"
"Glyma.18G207800","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.18G207900","No alias","Glycine max","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein","protein_coding"
"Glyma.18G259400","No alias","Glycine max","GAST1 protein homolog 4","protein_coding"
"Glyma.18G276200","No alias","Glycine max","DNA/RNA polymerases superfamily protein","protein_coding"
"Glyma.19G019900","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.19G052100","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.19G067100","No alias","Glycine max","TLC ATP/ADP transporter","protein_coding"
"Glyma.19G085300","No alias","Glycine max","Ribosomal protein L9/RNase H1","protein_coding"
"Glyma.19G099700","No alias","Glycine max","B-box type zinc finger protein with CCT domain","protein_coding"
"Glyma.19G102400","No alias","Glycine max","CCR-like","protein_coding"
"Glyma.19G129900","No alias","Glycine max","PENTATRICOPEPTIDE REPEAT 596","protein_coding"
"Glyma.19G250000","No alias","Glycine max","Li-tolerant lipase 1","protein_coding"
"Glyma.19G252200","No alias","Glycine max","Actin-like ATPase superfamily protein","protein_coding"
"Glyma.20G024400","No alias","Glycine max","antitermination NusB domain-containing protein","protein_coding"
"Glyma.20G026700","No alias","Glycine max","Glycosyl transferase, family 35","protein_coding"
"Glyma.20G031100","No alias","Glycine max","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Glyma.20G060000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G109800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.20G125900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.20G126800","No alias","Glycine max","Cyclase family protein","protein_coding"
"Glyma.20G142000","No alias","Glycine max","thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)","protein_coding"
"Glyma.20G167700","No alias","Glycine max","thioredoxin Y1","protein_coding"
"Glyma.20G249300","No alias","Glycine max","cyclophilin 20-2","protein_coding"
"Glyma.20G249800","No alias","Glycine max","Function unknown","protein_coding"
"GRMZM2G003765","No alias","Zea mays","plastid developmental protein DAG, putative","protein_coding"
"GRMZM2G003835","No alias","Zea mays","embryo defective 2752","protein_coding"
"GRMZM2G005788","No alias","Zea mays","Ribosomal protein L23/L15e family protein","protein_coding"
"GRMZM2G006229","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G007915","No alias","Zea mays","E1 C-terminal related 1","protein_coding"
"GRMZM2G009724","No alias","Zea mays","BTB-POZ and MATH domain 1","protein_coding"
"GRMZM2G010494","No alias","Zea mays","Transketolase","protein_coding"
"GRMZM2G011491","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G016362","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G027897","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G029856","No alias","Zea mays","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"GRMZM2G030080","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G037639","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G038338","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G040728","No alias","Zea mays","cytochrome P450, family 94, subfamily D, polypeptide 2","protein_coding"
"GRMZM2G042006","No alias","Zea mays","Double-stranded RNA-binding domain (DsRBD)-containing protein","protein_coding"
"GRMZM2G042343","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G047637","No alias","Zea mays","CYCLIN D1;1","protein_coding"
"GRMZM2G048129","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G050003","No alias","Zea mays","nucleotide transporter 1","protein_coding"
"GRMZM2G051842","No alias","Zea mays","pfkB-like carbohydrate kinase family protein","protein_coding"
"GRMZM2G052036","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G054130","No alias","Zea mays","transferases;folic acid binding","protein_coding"
"GRMZM2G057374","No alias","Zea mays","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"GRMZM2G060255","No alias","Zea mays","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"GRMZM2G061321","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding"
"GRMZM2G063340","No alias","Zea mays","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"GRMZM2G064473","No alias","Zea mays","nucleotide transporter 1","protein_coding"
"GRMZM2G065480","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G066222","No alias","Zea mays","ribosomal protein S27","protein_coding"
"GRMZM2G067306","No alias","Zea mays","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding"
"GRMZM2G067426","No alias","Zea mays","Protein of unknown function, DUF547","protein_coding"
"GRMZM2G070444","No alias","Zea mays","Histone superfamily protein","protein_coding"
"GRMZM2G073123","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G074248","No alias","Zea mays","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"GRMZM2G077797","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G083539","No alias","Zea mays","TLC ATP/ADP transporter","protein_coding"
"GRMZM2G087753","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G089596","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"GRMZM2G091419","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G095039","No alias","Zea mays","ralf-like 33","protein_coding"
"GRMZM2G095261","No alias","Zea mays","UDP-glucosyl transferase 71C4","protein_coding"
"GRMZM2G095400","No alias","Zea mays","Radical SAM superfamily protein","protein_coding"
"GRMZM2G095510","No alias","Zea mays","BTB/POZ domain-containing protein","protein_coding"
"GRMZM2G096100","No alias","Zea mays","germin-like protein 10","protein_coding"
"GRMZM2G096153","No alias","Zea mays","glutathione S-transferase F11","protein_coding"
"GRMZM2G097820","No alias","Zea mays","lumazine-binding family protein","protein_coding"
"GRMZM2G099049","No alias","Zea mays","Dormancy/auxin associated family protein","protein_coding"
"GRMZM2G101547","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G106515","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G106552","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G107380","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G109130","No alias","Zea mays","lipoxygenase 1","protein_coding"
"GRMZM2G110057","No alias","Zea mays","F-box family protein","protein_coding"
"GRMZM2G114322","No alias","Zea mays","expansin-like A1","protein_coding"
"GRMZM2G115925","No alias","Zea mays","Small nuclear ribonucleoprotein family protein","protein_coding"
"GRMZM2G116204","No alias","Zea mays","endoplasmic reticulum auxin binding protein 1","protein_coding"
"GRMZM2G116271","No alias","Zea mays","NB-ARC domain-containing disease resistance protein","protein_coding"
"GRMZM2G116282","No alias","Zea mays","Hyaluronan / mRNA binding family","protein_coding"
"GRMZM2G118003","No alias","Zea mays","B-S glucosidase 44","protein_coding"
"GRMZM2G119773","No alias","Zea mays","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"GRMZM2G122656","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G122848","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G123901","No alias","Zea mays","B-cell receptor-associated protein 31-like","protein_coding"
"GRMZM2G123940","No alias","Zea mays","serine carboxypeptidase-like 45","protein_coding"
"GRMZM2G128432","No alias","Zea mays","Primosome PriB/single-strand DNA-binding","protein_coding"
"GRMZM2G129540","No alias","Zea mays","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein","protein_coding"
"GRMZM2G130544","No alias","Zea mays","Ribosomal protein S13/S18 family","protein_coding"
"GRMZM2G134109","No alias","Zea mays","Ribosomal protein S21e","protein_coding"
"GRMZM2G137479","No alias","Zea mays","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"GRMZM2G138572","No alias","Zea mays","ATPase E1","protein_coding"
"GRMZM2G142111","No alias","Zea mays","Alba DNA/RNA-binding protein","protein_coding"
"GRMZM2G143788","No alias","Zea mays","SWIB/MDM2 domain superfamily protein","protein_coding"
"GRMZM2G145221","No alias","Zea mays","Protein of unknown function (DUF630 and DUF632)","protein_coding"
"GRMZM2G146047","No alias","Zea mays","zinc finger (CCCH type) helicase family protein","protein_coding"
"GRMZM2G149257","No alias","Zea mays","Translation protein SH3-like family protein","protein_coding"
"GRMZM2G149330","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G151223","No alias","Zea mays","CHASE domain containing histidine kinase protein","protein_coding"
"GRMZM2G151967","No alias","Zea mays","histidine acid phosphatase family protein","protein_coding"
"GRMZM2G153227","No alias","Zea mays","nucleolar RNA-binding Nop10p family protein","protein_coding"
"GRMZM2G154896","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G155593","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G157147","No alias","Zea mays","phosphatidylinositol-4-phosphate 5-kinase 1","protein_coding"
"GRMZM2G159901","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G162697","No alias","Zea mays","Eukaryotic rpb5 RNA polymerase subunit family protein","protein_coding"
"GRMZM2G162725","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G163641","No alias","Zea mays","overexpressor of cationic peroxidase 3","protein_coding"
"GRMZM2G164493","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G169914","No alias","Zea mays","S-adenosylmethionine carrier 2","protein_coding"
"GRMZM2G170558","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G171466","No alias","Zea mays","nascent polypeptide-associated complex subunit alpha-like protein 2","protein_coding"
"GRMZM2G171716","No alias","Zea mays","Protein of unknown function (DUF1295)","protein_coding"
"GRMZM2G171994","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G174479","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G174917","No alias","Zea mays","DREB and EAR motif protein 3","protein_coding"
"GRMZM2G175280","No alias","Zea mays","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding"
"GRMZM2G175867","No alias","Zea mays","RH39","protein_coding"
"GRMZM2G176721","No alias","Zea mays","Major facilitator superfamily protein","protein_coding"
"GRMZM2G176748","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G176962","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G319878","No alias","Zea mays","translocase inner membrane subunit 8","protein_coding"
"GRMZM2G322634","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G324903","No alias","Zea mays","Nodulin MtN3 family protein","protein_coding"
"GRMZM2G348675","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G353103","No alias","Zea mays","Ribosomal protein S5 domain 2-like superfamily protein","protein_coding"
"GRMZM2G353785","No alias","Zea mays","Ribosomal L18p/L5e family protein","protein_coding"
"GRMZM2G359038","No alias","Zea mays","nucleotide transporter 1","protein_coding"
"GRMZM2G359874","No alias","Zea mays","Ribosomal RNA processing Brix domain protein","protein_coding"
"GRMZM2G362298","No alias","Zea mays","HXXXD-type acyl-transferase family protein","protein_coding"
"GRMZM2G364172","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G364982","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G377600","No alias","Zea mays","ribosomal protein S27","protein_coding"
"GRMZM2G408379","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G416513","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G417125","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G421033","No alias","Zea mays","DREB and EAR motif protein 3","protein_coding"
"GRMZM2G425230","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G426156","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G426917","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G427014","No alias","Zea mays","Ribosomal protein S5 domain 2-like superfamily protein","protein_coding"
"GRMZM2G443829","No alias","Zea mays","Concanavalin A-like lectin protein kinase family protein","protein_coding"
"GRMZM2G449019","No alias","Zea mays","UDP-glucosyl transferase 88A1","protein_coding"
"GRMZM2G472651","No alias","Zea mays","Bacterial sec-independent translocation protein mttA/Hcf106","protein_coding"
"GRMZM5G801241","No alias","Zea mays","translocase inner membrane subunit 8","protein_coding"
"GRMZM5G823157","No alias","Zea mays","WRKY DNA-binding protein 35","protein_coding"
"GRMZM5G834941","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G835772","No alias","Zea mays","TLC ATP/ADP transporter","protein_coding"
"GRMZM5G845682","No alias","Zea mays","P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain","protein_coding"
"GRMZM5G864363","No alias","Zea mays","LYR family of Fe/S cluster biogenesis protein","protein_coding"
"GRMZM5G870342","No alias","Zea mays","Coproporphyrinogen III oxidase","protein_coding"
"HORVU0Hr1G014780.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G025910.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G027490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G028320.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G035910.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G039190.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G000270.1","No alias","Hordeum vulgare","regulatory protein *(KOBITO) of cellulose-hemicellulose network assembly","protein_coding"
"HORVU1Hr1G000400.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G001270.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G019330.7","No alias","Hordeum vulgare","brassinosteroid signalling protein phosphatase *(BSU/BSL) & phosphatase *(PPKL) & regulatory protein phosphatase *(BSL) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"HORVU1Hr1G020390.1","No alias","Hordeum vulgare","scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes","protein_coding"
"HORVU1Hr1G024210.1","No alias","Hordeum vulgare","methylation reader Alfin of PRC1 complex","protein_coding"
"HORVU1Hr1G038070.1","No alias","Hordeum vulgare","C-class RAB GTPase","protein_coding"
"HORVU1Hr1G049690.1","No alias","Hordeum vulgare","xanthine dehydrogenase *(XDH) & xanthine dehydrogenase & EC_1.17 oxidoreductase acting on CH or CH2 group & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"HORVU1Hr1G050970.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G062650.1","No alias","Hordeum vulgare","subunit delta of cargo adaptor F-subcomplex","protein_coding"
"HORVU1Hr1G079800.1","No alias","Hordeum vulgare","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"HORVU1Hr1G081950.7","No alias","Hordeum vulgare","respiratory burst NADPH oxidase *(SGN4) & NADPH-oxidase *(Rboh)","protein_coding"
"HORVU1Hr1G083580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G086120.3","No alias","Hordeum vulgare","ligand-gated cation channel *(GLR)","protein_coding"
"HORVU1Hr1G093430.8","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G095300.15","No alias","Hordeum vulgare","siRNA-integrating factor *(AGO)","protein_coding"
"HORVU2Hr1G028210.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G029100.1","No alias","Hordeum vulgare","acetyltransferase component *(HAM) of NuA4 histone acetyltransferase complex","protein_coding"
"HORVU2Hr1G032540.2","No alias","Hordeum vulgare","class-II histone deacetylase","protein_coding"
"HORVU2Hr1G040020.4","No alias","Hordeum vulgare","ARF-GTPase guanyl-nucleotide exchange factor *(BIG)","protein_coding"
"HORVU2Hr1G050980.2","No alias","Hordeum vulgare","mitochondrial NAD-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU2Hr1G052430.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G066560.1","No alias","Hordeum vulgare","accessory component *(Sec63) of co-translational insertion system","protein_coding"
"HORVU2Hr1G079830.2","No alias","Hordeum vulgare","Golgi-ER retrograde trafficking cargo receptor *(ERV-A)","protein_coding"
"HORVU2Hr1G080240.1","No alias","Hordeum vulgare","microtubule-based motor protein *(Kinesin-14) & Kinesin-14-type motor protein","protein_coding"
"HORVU2Hr1G082590.15","No alias","Hordeum vulgare","autophagosome cargo receptor protein *(NBR1)","protein_coding"
"HORVU2Hr1G085060.2","No alias","Hordeum vulgare","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding"
"HORVU2Hr1G087390.3","No alias","Hordeum vulgare","mRNA poly-A-tail binding factor *(PABP)","protein_coding"
"HORVU2Hr1G093580.4","No alias","Hordeum vulgare","AGC-VIII protein kinase & regulatory protein kinase *(PAX) of asymmetric cell division & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G118680.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G122680.2","No alias","Hordeum vulgare","acyl-CoA-binding protein *(ACBP1/2/3) & membrane-anchor component *(ACBP1/2) of oxygen-sensor activity","protein_coding"
"HORVU2Hr1G126610.4","No alias","Hordeum vulgare","assembly factor (TRN1) of RNA-induced silencing complex (RISC) assembly & nucleocytoplasmic import karyopherin *(IMB2)","protein_coding"
"HORVU3Hr1G006290.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G013600.2","No alias","Hordeum vulgare","protein involved in cytochrome b6/f complex assembly *(HCF222)","protein_coding"
"HORVU3Hr1G022500.4","No alias","Hordeum vulgare","metal cation transporter *(IAR)","protein_coding"
"HORVU3Hr1G030330.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G051540.5","No alias","Hordeum vulgare","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"HORVU3Hr1G058170.1","No alias","Hordeum vulgare","ATP","protein_coding"
"HORVU3Hr1G064230.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G080730.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G086830.6","No alias","Hordeum vulgare","E-class RAB GTPase","protein_coding"
"HORVU3Hr1G099730.1","No alias","Hordeum vulgare","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"HORVU3Hr1G114340.4","No alias","Hordeum vulgare","plastidial RNA processing factor *(PPR287)","protein_coding"
"HORVU4Hr1G008870.18","No alias","Hordeum vulgare","chromatin remodeling factor *(DDM1)","protein_coding"
"HORVU4Hr1G014740.3","No alias","Hordeum vulgare","component *(Sec23) of Sec23/24 cargo adaptor subcomplex","protein_coding"
"HORVU4Hr1G022450.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G038850.4","No alias","Hordeum vulgare","large subunit of U2AF pre-RNA splicing auxiliary factor complex","protein_coding"
"HORVU4Hr1G053760.1","No alias","Hordeum vulgare","polysaccharide O-acetyltransferase *(TBR)","protein_coding"
"HORVU4Hr1G056610.3","No alias","Hordeum vulgare","catalytic subunit alpha of SnRK1 kinase complex & catalytic subunit alpha of SNF1-related SnRK1 protein kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G060880.1","No alias","Hordeum vulgare","component *(TASH3) of TPLATE AP-2 co-adaptor complex","protein_coding"
"HORVU4Hr1G082050.5","No alias","Hordeum vulgare","ubiquitin-proteasome shuttle factor *(DSK2)","protein_coding"
"HORVU4Hr1G082280.2","No alias","Hordeum vulgare","component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex","protein_coding"
"HORVU4Hr1G085270.2","No alias","Hordeum vulgare","regulatory component *(ALIS) of ALA-ALIS flippase complex & regulatory component *(ALIS) of phospholipid flippase complex","protein_coding"
"HORVU4Hr1G088910.12","No alias","Hordeum vulgare","MAPKKK-kinase protein kinase & MAP4K accessory protein kinase *(TOI4/5) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G016850.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G022050.33","No alias","Hordeum vulgare","component *(ZFC3H1) of PAXT nucleoplasmic activation complex","protein_coding"
"HORVU5Hr1G031300.2","No alias","Hordeum vulgare","phosphatidylinositol 3-phosphate phosphatase *(PTEN) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"HORVU5Hr1G043080.8","No alias","Hordeum vulgare","component *(NRPE5) of RNA polymerase V complex","protein_coding"
"HORVU5Hr1G048660.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G049730.1","No alias","Hordeum vulgare","triacylglycerol lipase *(LIP)","protein_coding"
"HORVU5Hr1G051300.6","No alias","Hordeum vulgare","protein factor PRPF3 of U4/U6 small nuclear ribonucleoprotein particle (snRNP) & component *(PRPF3) of U4/U6.U5 tri-snRNP complex","protein_coding"
"HORVU5Hr1G060450.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G062040.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G067090.1","No alias","Hordeum vulgare","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding"
"HORVU5Hr1G070160.2","No alias","Hordeum vulgare","starch-debranching isoamylase *(ISA3)","protein_coding"
"HORVU5Hr1G072260.1","No alias","Hordeum vulgare","component *(VPS52/POK) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"HORVU5Hr1G078470.2","No alias","Hordeum vulgare","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding"
"HORVU5Hr1G082630.5","No alias","Hordeum vulgare","triosephosphate isomerase & triosephosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding"
"HORVU5Hr1G088830.1","No alias","Hordeum vulgare","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"HORVU5Hr1G089230.1","No alias","Hordeum vulgare","fatty acyl CoA reductase *(FAR)","protein_coding"
"HORVU5Hr1G095190.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G095660.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G111360.2","No alias","Hordeum vulgare","component *(IES2) of INO80 chromatin remodeling complex","protein_coding"
"HORVU5Hr1G113880.27","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding"
"HORVU5Hr1G114510.6","No alias","Hordeum vulgare","sporopollenin export factor *(IEF)","protein_coding"
"HORVU5Hr1G116870.4","No alias","Hordeum vulgare","D-galactokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G000380.1","No alias","Hordeum vulgare","non-canonical component *(XLG) of heterotrimeric G-protein complex","protein_coding"
"HORVU6Hr1G006560.7","No alias","Hordeum vulgare","subunit beta of E1 subcomplex of 2-oxoisovalerate dehydrogenase complex","protein_coding"
"HORVU6Hr1G009040.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G009900.9","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G019520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G021340.18","No alias","Hordeum vulgare","PHD-type transcription factor","protein_coding"
"HORVU6Hr1G027910.22","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G028330.1","No alias","Hordeum vulgare","sucrose-phosphate synthase & EC_2.4 glycosyltransferase","protein_coding"
"HORVU6Hr1G033350.1","No alias","Hordeum vulgare","fumarylacetoacetate hydrolase *(FAH)","protein_coding"
"HORVU6Hr1G034840.3","No alias","Hordeum vulgare","regulatory component B2 of PP2A phosphatase complexes","protein_coding"
"HORVU6Hr1G036830.1","No alias","Hordeum vulgare","ATP","protein_coding"
"HORVU6Hr1G053650.1","No alias","Hordeum vulgare","regulatory component of isocitrate dehydrogenase heterodimer & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU6Hr1G060760.3","No alias","Hordeum vulgare","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"HORVU6Hr1G061750.1","No alias","Hordeum vulgare","CLK/LAMMER protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G088570.2","No alias","Hordeum vulgare","clathrin cargo adaptor *(Epsin)","protein_coding"
"HORVU6Hr1G088850.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G089700.3","No alias","Hordeum vulgare","component *(LUG/LUH) of transcriptional co-repressor complex","protein_coding"
"HORVU7Hr1G022500.2","No alias","Hordeum vulgare","ATP-dependent phosphofructokinase","protein_coding"
"HORVU7Hr1G043800.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G044470.12","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G047130.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G052090.3","No alias","Hordeum vulgare","stress granule assembly factor *(UBP1)","protein_coding"
"HORVU7Hr1G057290.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G068990.2","No alias","Hordeum vulgare","brassinosteroid co-receptor protein kinase *(BAK/SERK) & LRR-II protein kinase & co-receptor kinase component of FLS2-BAK1 flagellin receptor complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G073780.1","No alias","Hordeum vulgare","component *(Bud13) of non-snRNP MOS4-associated complex","protein_coding"
"HORVU7Hr1G079430.2","No alias","Hordeum vulgare","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & spermine synthase","protein_coding"
"HORVU7Hr1G081270.1","No alias","Hordeum vulgare","co-chaperone *(P58)","protein_coding"
"HORVU7Hr1G093340.8","No alias","Hordeum vulgare","histone methyltransferase *(ATXR4)","protein_coding"
"HORVU7Hr1G095680.6","No alias","Hordeum vulgare","subunit beta of ATP-dependent citrate lyase complex & EC_2.3 acyltransferase","protein_coding"
"HORVU7Hr1G097210.3","No alias","Hordeum vulgare","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"HORVU7Hr1G099220.5","No alias","Hordeum vulgare","RLCK-VI receptor-like protein kinase & interactive protein kinase of ROP-GTPase activity *(RBK/RRK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G102150.1","No alias","Hordeum vulgare","solute transporter *(TPPT)","protein_coding"
"HORVU7Hr1G106380.1","No alias","Hordeum vulgare","subunit alpha of RAB-GTPase geranylgeranyltransferase (RGT) complex & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU7Hr1G106630.1","No alias","Hordeum vulgare","component *(AUG2) of Augmin gamma-TuRC recruiting complex","protein_coding"
"HORVU7Hr1G117780.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00001_0740","kfl00001_0740_v1.1","Klebsormidium nitens","(q9lst7|psb3_orysa : 328.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (at1g21720 : 325.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"Kfl00001_0760","kfl00001_0760_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00003_0070","kfl00003_0070_v1.1","Klebsormidium nitens","(at4g36190 : 439.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: Serine carboxypeptidase S28 family protein (TAIR:AT4G36195.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0360","kfl00005_0360_v1.1","Klebsormidium nitens","(at1g18600 : 113.0) Mitochondrion-located rhomboid-like protein; RHOMBOID-like protein 12 (RBL12); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74130.1); Has 3270 Blast hits to 3270 proteins in 960 species: Archae - 107; Bacteria - 1998; Metazoa - 110; Fungi - 132; Plants - 58; Viruses - 0; Other Eukaryotes - 865 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0520","kfl00005_0520_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00010_0360","kfl00010_0360_v1.1","Klebsormidium nitens","(at4g32910 : 301.0) CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"Kfl00017_0080","kfl00017_0080_v1.1","Klebsormidium nitens","(at5g11340 : 198.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0540","kfl00020_0540_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0320","kfl00024_0320_v1.1","Klebsormidium nitens","(at3g09470 : 331.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); Has 810 Blast hits to 800 proteins in 150 species: Archae - 2; Bacteria - 12; Metazoa - 490; Fungi - 196; Plants - 54; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0290","kfl00029_0290_v1.1","Klebsormidium nitens","(at1g12640 : 226.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G63050.1); Has 1204 Blast hits to 1199 proteins in 313 species: Archae - 0; Bacteria - 269; Metazoa - 625; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00042_0100","kfl00042_0100_v1.1","Klebsormidium nitens","(at5g18570 : 498.0) Encodes AtObgC, a plant ortholog of bacterial Obg.  AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is  dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis.; EMBRYO DEFECTIVE 269 (EMB269); FUNCTIONS IN: GTPase activity; INVOLVED IN: response to light stimulus, thylakoid membrane organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast stroma, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG subdomain (InterPro:IPR006169), GTP-binding protein GTP1/OBG, C-terminal (InterPro:IPR015349), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: GTP-binding protein Obg/CgtA (TAIR:AT1G07615.1); Has 23458 Blast hits to 23162 proteins in 3000 species: Archae - 644; Bacteria - 14053; Metazoa - 1121; Fungi - 826; Plants - 464; Viruses - 52; Other Eukaryotes - 6298 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0150","kfl00054_0150_v1.1","Klebsormidium nitens","(at4g32060 : 300.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00059_0180","kfl00059_0180_v1.1","Klebsormidium nitens","(at1g74850 : 110.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0130","kfl00061_0130_v1.1","Klebsormidium nitens","(at4g29870 : 119.0) Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT2G19340.2); Has 217 Blast hits to 217 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0310","kfl00061_0310_v1.1","Klebsormidium nitens","(q9axa6|abil1_orysa : 112.0) Probable protein ABIL1 (Abl interactor-like protein 1) - Oryza sativa (Rice) & (at2g46225 : 103.0) Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching.  One of four ABI-like proteins.; ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"Kfl00072_0020","kfl00072_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00079_0040","kfl00079_0040_v1.1","Klebsormidium nitens","(at1g78930 : 102.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0300","kfl00080_0300_v1.1","Klebsormidium nitens","(at1g11880 : 296.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"Kfl00097_0380","kfl00097_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00105_0020","kfl00105_0020_v1.1","Klebsormidium nitens","(at4g16180 : 530.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00106_0200","kfl00106_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00118_0140","kfl00118_0140_v1.1","Klebsormidium nitens","(p32811|phsh_soltu : 847.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 840.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 1680.0) &  (original description: no original description)","protein_coding"
"Kfl00124_0030","kfl00124_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00141_0170","kfl00141_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00148_0100","kfl00148_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00154_0160","kfl00154_0160_v1.1","Klebsormidium nitens","(at5g08610 : 471.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G08620.1); Has 49840 Blast hits to 44437 proteins in 3094 species: Archae - 842; Bacteria - 25196; Metazoa - 7587; Fungi - 5309; Plants - 2787; Viruses - 50; Other Eukaryotes - 8069 (source: NCBI BLink). & (p46942|db10_nicsy : 194.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"Kfl00156_0025","kfl00156_0025_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00168_0060","kfl00168_0060_v1.1","Klebsormidium nitens","(at5g03910 : 398.0) member of ATH subfamily; ABC2 homolog 12 (ATH12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 14 (TAIR:AT1G28010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 221.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"Kfl00169_0150","kfl00169_0150_v1.1","Klebsormidium nitens","(at3g58530 : 290.0) RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G23340.1); Has 9313 Blast hits to 3891 proteins in 246 species: Archae - 0; Bacteria - 470; Metazoa - 3686; Fungi - 1044; Plants - 3046; Viruses - 9; Other Eukaryotes - 1058 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"Kfl00177_0200","kfl00177_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00179_0160","kfl00179_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00185_0070","kfl00185_0070_v1.1","Klebsormidium nitens","(at3g52390 : 415.0) TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT3G03500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 830.0) &  (original description: no original description)","protein_coding"
"Kfl00186_0100","kfl00186_0100_v1.1","Klebsormidium nitens","(at3g58660 : 160.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"Kfl00187_0180","kfl00187_0180_v1.1","Klebsormidium nitens","(at1g09620 : 1263.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (reliability: 2526.0) &  (original description: no original description)","protein_coding"
"Kfl00198_0130","kfl00198_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00198_0240","kfl00198_0240_v1.1","Klebsormidium nitens","(at1g36980 : 156.0) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"Kfl00222_0130","kfl00222_0130_v1.1","Klebsormidium nitens","(at4g10960 : 474.0) Encodes a protein with UDP-D-glucose 4-epimerase activity.; UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43070|gale1_pea : 448.0) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase) - Pisum sativum (Garden pea) & (reliability: 948.0) &  (original description: no original description)","protein_coding"
"Kfl00235_0150","kfl00235_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00240_0010","kfl00240_0010_v1.1","Klebsormidium nitens","(at5g03345 : 83.6) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"Kfl00249_0040","kfl00249_0040_v1.1","Klebsormidium nitens","(at3g03305 : 284.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 171 Blast hits to 169 proteins in 60 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 10; Plants - 59; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"Kfl00254_0050","kfl00254_0050_v1.1","Klebsormidium nitens","(at5g54290 : 261.0) Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.; CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"Kfl00255_0200","kfl00255_0200_v1.1","Klebsormidium nitens","(at2g21250 : 385.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p28475|s6pd_maldo : 371.0) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"Kfl00257_0060","kfl00257_0060_v1.1","Klebsormidium nitens","(at4g39390 : 332.0) Encodes a golgi localized  nucleotide sugar transporter.; nucleotide sugar transporter-KT 1 (NST-K1); FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity; INVOLVED IN: nucleotide-sugar transport; LOCATED IN: Golgi membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G09810.1). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"Kfl00263_0010","kfl00263_0010_v1.1","Klebsormidium nitens","(q43644|ndus1_soltu : 823.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 783.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I).  The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1566.0) &  (original description: no original description)","protein_coding"
"Kfl00270_0190","kfl00270_0190_v1.1","Klebsormidium nitens","(at2g47830 : 294.0) Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT3G58060.1); Has 9392 Blast hits to 9378 proteins in 2385 species: Archae - 234; Bacteria - 7700; Metazoa - 297; Fungi - 408; Plants - 275; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"Kfl00275_0160","kfl00275_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00279_0150","kfl00279_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00283_0020","kfl00283_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00289_0150","kfl00289_0150_v1.1","Klebsormidium nitens","(at4g17830 : 573.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: metallopeptidase activity, hydrolase activity; INVOLVED IN: proteolysis, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650). & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"Kfl00292_0090","kfl00292_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00302_0120","kfl00302_0120_v1.1","Klebsormidium nitens","(at1g27090 : 138.0) glycine-rich protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24690.1); Has 13206 Blast hits to 7104 proteins in 677 species: Archae - 0; Bacteria - 2039; Metazoa - 5686; Fungi - 1146; Plants - 2571; Viruses - 80; Other Eukaryotes - 1684 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"Kfl00323_0030","kfl00323_0030_v1.1","Klebsormidium nitens","(at5g48440 : 193.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00339_0120","kfl00339_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00345_0110","kfl00345_0110_v1.1","Klebsormidium nitens","(at1g54310 : 397.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine-dependent methyltransferase (InterPro:IPR019614), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"Kfl00353_0100","kfl00353_0100_v1.1","Klebsormidium nitens","(at3g45770 : 308.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"Kfl00356_0060","kfl00356_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00356_0070","kfl00356_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00358_0070","kfl00358_0070_v1.1","Klebsormidium nitens","(at1g79050 : 405.0) recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19704 Blast hits to 19632 proteins in 5647 species: Archae - 493; Bacteria - 14777; Metazoa - 222; Fungi - 191; Plants - 243; Viruses - 74; Other Eukaryotes - 3704 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"Kfl00360_0060","kfl00360_0060_v1.1","Klebsormidium nitens","(at1g43580 : 303.0) Sphingomyelin synthetase family protein; Has 50 Blast hits to 47 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"Kfl00367_0020","kfl00367_0020_v1.1","Klebsormidium nitens","(at1g15500 : 649.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 634.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1278.0) &  (original description: no original description)","protein_coding"
"Kfl00373_0050","kfl00373_0050_v1.1","Klebsormidium nitens","(at5g40670 : 271.0) PQ-loop repeat family protein / transmembrane family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Lysosomal cystine transporter (InterPro:IPR005282); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"Kfl00388_0100","kfl00388_0100_v1.1","Klebsormidium nitens","(at1g76150 : 257.0) Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.; enoyl-CoA hydratase 2 (ECH2); FUNCTIONS IN: oxidoreductase activity, 3R-hydroxyacyl-CoA dehydratase activity; INVOLVED IN: fatty acid beta-oxidation, unsaturated, even number, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MaoC-like dehydratase (InterPro:IPR002539), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); Has 2242 Blast hits to 2242 proteins in 541 species: Archae - 23; Bacteria - 1245; Metazoa - 172; Fungi - 395; Plants - 47; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"Kfl00417_0030","kfl00417_0030_v1.1","Klebsormidium nitens","(at1g07080 : 157.0) Thioredoxin superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma interferon inducible lysosomal thiol reductase GILT (InterPro:IPR004911), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: gamma interferon responsive lysosomal thiol (GILT) reductase family protein (TAIR:AT5G01580.1); Has 470 Blast hits to 463 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 320; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"Kfl00456_0190","kfl00456_0190_v1.1","Klebsormidium nitens","(q43209|pimt_wheat : 141.0) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) - Triticum aestivum (Wheat) & (at3g48330 : 136.0) encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination.; protein-l-isoaspartate methyltransferase 1 (PIMT1); FUNCTIONS IN: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; INVOLVED IN: protein modification process, response to salt stress, aging, response to abscisic acid stimulus, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: seedling, seed; EXPRESSED DURING: dry seed stage; CONTAINS InterPro DOMAIN/s: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (InterPro:IPR000682); BEST Arabidopsis thaliana protein match is: protein-l-isoaspartate methyltransferase 2 (TAIR:AT5G50240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"Kfl00464_0110","kfl00464_0110_v1.1","Klebsormidium nitens","(at1g18100 : 107.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (q9xh44|cet1_tobac : 100.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"Kfl00466_0020","kfl00466_0020_v1.1","Klebsormidium nitens","(at2g18876 : 240.0) Afadin/alpha-actinin-binding protein; CONTAINS InterPro DOMAIN/s: Afadin/alpha-actinin-binding (InterPro:IPR021622); BEST Arabidopsis thaliana protein match is: Afadin/alpha-actinin-binding protein (TAIR:AT5G57410.2); Has 2181 Blast hits to 1953 proteins in 285 species: Archae - 6; Bacteria - 183; Metazoa - 1166; Fungi - 140; Plants - 107; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Kfl00472_0040","kfl00472_0040_v1.1","Klebsormidium nitens","(at2g39090 : 296.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"Kfl00475_0050","kfl00475_0050_v1.1","Klebsormidium nitens","(at5g59770 : 198.0) Protein-tyrosine phosphatase-like, PTPLA; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G10480.2); Has 698 Blast hits to 698 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 336; Fungi - 172; Plants - 117; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"Kfl00477_0050","kfl00477_0050_v1.1","Klebsormidium nitens","(p40392|ric1_orysa : 214.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (at4g17530 : 209.0) RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23; Bacteria - 169; Metazoa - 15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other Eukaryotes - 6202 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0070","kfl00481_0070_v1.1","Klebsormidium nitens","(at3g09580 : 394.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 788.0) &  (original description: no original description)","protein_coding"
"Kfl00485_0040","kfl00485_0040_v1.1","Klebsormidium nitens","(at4g15940 : 117.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"Kfl00550_0040","kfl00550_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00593_0020","kfl00593_0020_v1.1","Klebsormidium nitens","(at1g75510 : 121.0) Transcription initiation factor IIF, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter; LOCATED IN: mitochondrion, transcription factor TFIIF complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription Factor IIF, Rap30/Rap74, interaction (InterPro:IPR011039), Transcription initiation factor IIF, beta subunit (InterPro:IPR003196), Transcription initiation factor IIF, beta subunit, subgroup (InterPro:IPR016640); BEST Arabidopsis thaliana protein match is: Transcription initiation factor IIF, beta subunit (TAIR:AT3G52270.1); Has 346 Blast hits to 346 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 128; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"Kfl00606_0110","kfl00606_0110_v1.1","Klebsormidium nitens","(at1g08540 : 120.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"Kfl00613_0070","kfl00613_0070_v1.1","Klebsormidium nitens","(p93411|ccnc_orysa : 255.0) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (at5g48640 : 238.0) Cyclin family protein; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"Kfl00626_0040","kfl00626_0040_v1.1","Klebsormidium nitens","(at3g07140 : 362.0) GPI transamidase component Gpi16 subunit family protein; FUNCTIONS IN: GPI-anchor transamidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gpi16 subunit, GPI transamidase component (InterPro:IPR007245); Has 383 Blast hits to 363 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 131; Plants - 68; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"Kfl00637_0100","kfl00637_0100_v1.1","Klebsormidium nitens","(at1g14410 : 139.0) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"Kfl00641_0020","kfl00641_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00711_0050","kfl00711_0050_v1.1","Klebsormidium nitens","(at5g22790 : 294.0) reticulata-related 1 (RER1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT2G37860.3); Has 4329 Blast hits to 1807 proteins in 262 species: Archae - 14; Bacteria - 665; Metazoa - 1748; Fungi - 324; Plants - 608; Viruses - 168; Other Eukaryotes - 802 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"Kfl00757_0050","kfl00757_0050_v1.1","Klebsormidium nitens","(at2g20190 : 468.0) Encodes a microtubule-associated protein that is involved in both cell division and cell expansion.  It likely promotes microtubule stability.; CLIP-associated protein (CLASP); FUNCTIONS IN: binding; INVOLVED IN: mitosis, protein stabilization, cell growth; LOCATED IN: spindle microtubule, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"Kfl00765_0040","kfl00765_0040_v1.1","Klebsormidium nitens","(at4g31600 : 199.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"Kfl00770_0060","kfl00770_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00776_0050","kfl00776_0050_v1.1","Klebsormidium nitens","(at5g21060 : 238.0) Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: homoserine dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, aspartate family amino acid biosynthetic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine dehydrogenase, short (InterPro:IPR022697), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 7513 Blast hits to 7513 proteins in 2318 species: Archae - 181; Bacteria - 5355; Metazoa - 3; Fungi - 163; Plants - 133; Viruses - 0; Other Eukaryotes - 1678 (source: NCBI BLink). & (p49079|akh1_maize : 159.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"Kfl00800_0020","kfl00800_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00863_0045","kfl00863_0045_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00873_0020","kfl00873_0020_v1.1","Klebsormidium nitens","(at4g27490 : 207.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"Kfl00916_0040","kfl00916_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00981_0010","kfl00981_0010_v1.1","Klebsormidium nitens","(at5g21040 : 271.0) Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.; F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"Kfl01166_0020","kfl01166_0020_v1.1","Klebsormidium nitens","(at5g64500 : 423.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl01280_0010","kfl01280_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01351_0010","kfl01351_0010_v1.1","Klebsormidium nitens","(at3g20630 : 903.0) Encodes a ubiquitin-specific protease.  Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage.  Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (reliability: 1806.0) &  (original description: no original description)","protein_coding"
"Kfl01467_0010","kfl01467_0010_v1.1","Klebsormidium nitens","(at4g19540 : 322.0) IND1(iron-sulfur protein required for NADH dehydrogenase)-like (INDL); LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: ATP binding (TAIR:AT3G24430.1); Has 13193 Blast hits to 13164 proteins in 2587 species: Archae - 550; Bacteria - 7572; Metazoa - 442; Fungi - 431; Plants - 201; Viruses - 0; Other Eukaryotes - 3997 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"Kfl01539_0010","kfl01539_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g01390","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g01670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g08770","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os01g10180","No alias","Oryza sativa","avr9/Cf-9 rapidly elicited protein 146, putative, expressed","protein_coding"
"LOC_Os01g19160","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os01g20830","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding"
"LOC_Os01g23380","No alias","Oryza sativa","stripe rust resistance protein Yr10, putative, expressed","protein_coding"
"LOC_Os01g27390","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os01g33080","No alias","Oryza sativa","fimbrin-like protein 2, putative, expressed","protein_coding"
"LOC_Os01g35050","No alias","Oryza sativa","early-responsive to dehydration protein-related, putative, expressed","protein_coding"
"LOC_Os01g37690","No alias","Oryza sativa","sodium/calcium exchanger protein, putative, expressed","protein_coding"
"LOC_Os01g43160","No alias","Oryza sativa","polygalacturonase, putative, expressed","protein_coding"
"LOC_Os01g43320","No alias","Oryza sativa","transmembrane amino acid transporter protein, putative, expressed","protein_coding"
"LOC_Os01g45820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g45910","No alias","Oryza sativa","plastidic ATP/ADP-transporter, putative, expressed","protein_coding"
"LOC_Os01g49340","No alias","Oryza sativa","arginine/serine-rich coiled-coil protein 1, putative, expressed","protein_coding"
"LOC_Os01g51220","No alias","Oryza sativa","transport protein particle component, Bet3, domain containing protein, expressed","protein_coding"
"LOC_Os01g52560","No alias","Oryza sativa","Plant PDR ABC transporter associated domain containing protein, expressed","protein_coding"
"LOC_Os01g57400","No alias","Oryza sativa","lysM domain containing protein, putative","protein_coding"
"LOC_Os01g57540","No alias","Oryza sativa","protein kinase, putative, expressed","protein_coding"
"LOC_Os01g62080","No alias","Oryza sativa","serine/threonine-protein kinase AFC1, putative, expressed","protein_coding"
"LOC_Os01g62830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g66180","No alias","Oryza sativa","cytochrome c, putative, expressed","protein_coding"
"LOC_Os01g70010","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os01g70140","No alias","Oryza sativa","ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed","protein_coding"
"LOC_Os01g72240","No alias","Oryza sativa","uridine 5-monophosphate synthase, putative, expressed","protein_coding"
"LOC_Os01g73910","No alias","Oryza sativa","peptidase, putative, expressed","protein_coding"
"LOC_Os01g74450","No alias","Oryza sativa","aquaporin protein, putative, expressed","protein_coding"
"LOC_Os01g74600","No alias","Oryza sativa","vegetative storage protein, putative, expressed","protein_coding"
"LOC_Os02g01830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g02120","No alias","Oryza sativa","OsWAK11 - OsWAK receptor-like protein kinase, expressed","protein_coding"
"LOC_Os02g09220","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g09240","No alias","Oryza sativa","cytochrome P450 71D8, putative, expressed","protein_coding"
"LOC_Os02g11740","No alias","Oryza sativa","plastidic ATP/ADP-transporter, putative, expressed","protein_coding"
"LOC_Os02g17450","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g17850","No alias","Oryza sativa","TOM2B, putative, expressed","protein_coding"
"LOC_Os02g32350","No alias","Oryza sativa","TUDOR protein with multiple SNc domains, putative, expressed","protein_coding"
"LOC_Os02g32430","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os02g36190","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g36210","No alias","Oryza sativa","ent-kaurene synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os02g48400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g49230","No alias","Oryza sativa","CCT/B-box zinc finger protein, putative, expressed","protein_coding"
"LOC_Os02g52130","No alias","Oryza sativa","OsFBX61 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os02g52930","No alias","Oryza sativa","integral membrane protein DUF6 containing protein, expressed","protein_coding"
"LOC_Os03g01850","No alias","Oryza sativa","cyclin-dependent kinase A-1, putative, expressed","protein_coding"
"LOC_Os03g03490","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g08460","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os03g10460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g22730","No alias","Oryza sativa","nucleolar protein NOP5-1, putative, expressed","protein_coding"
"LOC_Os03g27950","No alias","Oryza sativa","Ser/Thr protein phosphatase family protein, putative, expressed","protein_coding"
"LOC_Os03g28080","No alias","Oryza sativa","ring-H2 zinc finger protein, putative, expressed","protein_coding"
"LOC_Os03g28310","No alias","Oryza sativa","dnaJ domain containing protein, expressed","protein_coding"
"LOC_Os03g29150","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family protein, putative, expressed","protein_coding"
"LOC_Os03g31320","No alias","Oryza sativa","RING zinc finger protein-like, putative, expressed","protein_coding"
"LOC_Os03g32170","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family protein, putative, expressed","protein_coding"
"LOC_Os03g37290","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os03g42050","No alias","Oryza sativa","exportin-7-A, putative, expressed","protein_coding"
"LOC_Os03g43410","No alias","Oryza sativa","OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed","protein_coding"
"LOC_Os03g46640","No alias","Oryza sativa","deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed","protein_coding"
"LOC_Os03g49700","No alias","Oryza sativa","SNARE associated Golgi protein, putative, expressed","protein_coding"
"LOC_Os03g50210","No alias","Oryza sativa","DUF292 domain containing protein, expressed","protein_coding"
"LOC_Os03g51900","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g55470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g56610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g58520","No alias","Oryza sativa","green ripe-like, putative, expressed","protein_coding"
"LOC_Os03g58630","No alias","Oryza sativa","thioredoxin, putative, expressed","protein_coding"
"LOC_Os03g58810","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g60900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g60939","No alias","Oryza sativa","dolichyl-phosphate beta-glycosyltransferase, putative, expressed","protein_coding"
"LOC_Os03g63410","No alias","Oryza sativa","elongation factor Tu, putative, expressed","protein_coding"
"LOC_Os03g63420","No alias","Oryza sativa","OsGrx_S14 - glutaredoxin subgroup II, expressed","protein_coding"
"LOC_Os04g01300","No alias","Oryza sativa","OsRhmbd10 - Putative Rhomboid homologue, expressed","protein_coding"
"LOC_Os04g10010","No alias","Oryza sativa","sex determination protein tasselseed-2, putative, expressed","protein_coding"
"LOC_Os04g14250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g30780","No alias","Oryza sativa","eukaryotic translation initiation factor 3 subunit H, putative, expressed","protein_coding"
"LOC_Os04g31070","No alias","Oryza sativa","acyl-desaturase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os04g31820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g32590","No alias","Oryza sativa","transcription factor, putative, expressed","protein_coding"
"LOC_Os04g33110","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g34800","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os04g38620","No alias","Oryza sativa","NAP domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g38650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g39360","No alias","Oryza sativa","heavy metal transport/detoxification protein, putative, expressed","protein_coding"
"LOC_Os04g48520","No alias","Oryza sativa","ZOS4-12 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os04g49620","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding"
"LOC_Os04g51130","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g51890","No alias","Oryza sativa","OsSAUR20 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"LOC_Os04g53670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g56240","No alias","Oryza sativa","lipase, putative, expressed","protein_coding"
"LOC_Os04g57310","No alias","Oryza sativa","thiol-disulphide oxidoreductase DCC, putative, expressed","protein_coding"
"LOC_Os04g57890","No alias","Oryza sativa","oligosaccharyl transferase, putative, expressed","protein_coding"
"LOC_Os05g02050","No alias","Oryza sativa","mitochondrial import inner membrane translocase subunit Tim, putative, expressed","protein_coding"
"LOC_Os05g03520","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g13390","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g23670","No alias","Oryza sativa","transcription factor jumonji, putative, expressed","protein_coding"
"LOC_Os05g25210","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g30390","No alias","Oryza sativa","Os5bglu23 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, likely pseudogene in japonica, expressed","protein_coding"
"LOC_Os05g37800","No alias","Oryza sativa","DUF740 domain containing protein, expressed","protein_coding"
"LOC_Os05g38120","No alias","Oryza sativa","homeodomain protein, putative, expressed","protein_coding"
"LOC_Os05g38290","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os05g38940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g39380","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os05g41250","No alias","Oryza sativa","VQ domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g42130","No alias","Oryza sativa","MONOCULM 1, putative, expressed","protein_coding"
"LOC_Os05g43440","No alias","Oryza sativa","single-stranded DNA-binding protein, putative, expressed","protein_coding"
"LOC_Os05g43770","No alias","Oryza sativa","NLI interacting factor-like phosphatase, putative, expressed","protein_coding"
"LOC_Os06g04010","No alias","Oryza sativa","GAGA-binding protein, putative, expressed","protein_coding"
"LOC_Os06g07160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g07350","No alias","Oryza sativa","RNA-binding motif protein, putative, expressed","protein_coding"
"LOC_Os06g15410","No alias","Oryza sativa","angel, putative, expressed","protein_coding"
"LOC_Os06g16420","No alias","Oryza sativa","amino acid transporter, putative, expressed","protein_coding"
"LOC_Os06g28880","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g35470","No alias","Oryza sativa","L1P family of ribosomal proteins domain containing protein, expressed","protein_coding"
"LOC_Os06g36590","No alias","Oryza sativa","transporter, monovalent cation:proton antiporter-2 family, putative, expressed","protein_coding"
"LOC_Os06g40440","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g44070","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g45300","No alias","Oryza sativa","serine/threonine-protein kinase HT1, putative, expressed","protein_coding"
"LOC_Os06g45670","No alias","Oryza sativa","glycine cleavage system H protein, putative, expressed","protein_coding"
"LOC_Os06g49980","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g50040","No alias","Oryza sativa","OsSAUR29 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"LOC_Os06g50080","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding"
"LOC_Os07g01620","No alias","Oryza sativa","dirigent, putative, expressed","protein_coding"
"LOC_Os07g08170","No alias","Oryza sativa","ruvB-like, putative, expressed","protein_coding"
"LOC_Os07g10770","No alias","Oryza sativa","CESA8 - cellulose synthase, expressed","protein_coding"
"LOC_Os07g13460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g15880","No alias","Oryza sativa","mitochondrial prohibitin complex protein 2, putative, expressed","protein_coding"
"LOC_Os07g17770","No alias","Oryza sativa","tryptophanyl-tRNA synthetase, cytoplasmic, putative, expressed","protein_coding"
"LOC_Os07g18120","No alias","Oryza sativa","aldehyde oxidase, putative, expressed","protein_coding"
"LOC_Os07g19210","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os07g26700","No alias","Oryza sativa","UPF0041 domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g28480","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os07g31720","No alias","Oryza sativa","GTPase activating protein, putative, expressed","protein_coding"
"LOC_Os07g34850","No alias","Oryza sativa","aspartic proteinase nepenthesin, putative, expressed","protein_coding"
"LOC_Os07g37110","No alias","Oryza sativa","nucleoside transporter, putative, expressed","protein_coding"
"LOC_Os07g37250","No alias","Oryza sativa","THYLAKOID FORMATION1, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os07g37320","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding"
"LOC_Os07g37550","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding"
"LOC_Os07g38770","No alias","Oryza sativa","transposon protein, putative, Pong sub-class, expressed","protein_coding"
"LOC_Os07g42730","No alias","Oryza sativa","EF hand family protein, expressed","protein_coding"
"LOC_Os07g43420","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os08g01220","No alias","Oryza sativa","harpin-induced protein 1 domain containing protein, expressed","protein_coding"
"LOC_Os08g10010","No alias","Oryza sativa","acyl-desaturase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os08g10070","No alias","Oryza sativa","protein kinase, putative, expressed","protein_coding"
"LOC_Os08g10470","No alias","Oryza sativa","histone-lysine N-methyltransferase ASHR2, putative, expressed","protein_coding"
"LOC_Os08g16130","No alias","Oryza sativa","fiber protein Fb34, putative, expressed","protein_coding"
"LOC_Os08g18870","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g26720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g32680","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding"
"LOC_Os08g34070","No alias","Oryza sativa","DCN1, putative, expressed","protein_coding"
"LOC_Os08g35840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g36420","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os08g38320","No alias","Oryza sativa","AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os08g39240","No alias","Oryza sativa","OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed","protein_coding"
"LOC_Os08g40930","No alias","Oryza sativa","Alpha amylase, catalytic domain containing protein, expressed","protein_coding"
"LOC_Os08g41000","No alias","Oryza sativa","extracellular ligand-gated ion channel, putative, expressed","protein_coding"
"LOC_Os08g41250","No alias","Oryza sativa","signal recognition particle receptor subunit beta, putative, expressed","protein_coding"
"LOC_Os09g02420","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g07800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g12500","No alias","Oryza sativa","EMB1381, putative, expressed","protein_coding"
"LOC_Os09g20640","No alias","Oryza sativa","serine/threonine-protein kinase 16, putative, expressed","protein_coding"
"LOC_Os09g25290","No alias","Oryza sativa","methyladenine glycosylase, putative, expressed","protein_coding"
"LOC_Os09g26830","No alias","Oryza sativa","lung seven transmembrane domain containing protein, putative, expressed","protein_coding"
"LOC_Os09g28310","No alias","Oryza sativa","bZIP transcription factor, putative, expressed","protein_coding"
"LOC_Os09g32250","No alias","Oryza sativa","DNA repair ATPase-related, putative, expressed","protein_coding"
"LOC_Os09g34180","No alias","Oryza sativa","formin, putative, expressed","protein_coding"
"LOC_Os09g36000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g37330","No alias","Oryza sativa","OsSAUR39 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"LOC_Os10g04429","No alias","Oryza sativa","transferase family protein, putative, expressed","protein_coding"
"LOC_Os10g06630","No alias","Oryza sativa","peptidyl-prolyl cis-trans isomerase, putative, expressed","protein_coding"
"LOC_Os10g09110","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os10g10180","No alias","Oryza sativa","methyltransferase domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g32790","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g33620","No alias","Oryza sativa","ubiquitin family protein, putative, expressed","protein_coding"
"LOC_Os10g35920","No alias","Oryza sativa","OsFBX389 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g36250","No alias","Oryza sativa","tetratricopeptide repeat, putative, expressed","protein_coding"
"LOC_Os10g36480","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g38340","No alias","Oryza sativa","glutathione S-transferase GSTU6, putative, expressed","protein_coding"
"LOC_Os11g04720","No alias","Oryza sativa","OsRR10  type-A response regulator, expressed","protein_coding"
"LOC_Os11g07230","No alias","Oryza sativa","receptor kinase, putative, expressed","protein_coding"
"LOC_Os11g08090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g08569","No alias","Oryza sativa","cycloartenol synthase, putative, expressed","protein_coding"
"LOC_Os11g10330","No alias","Oryza sativa","OsFBX416 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os11g10520","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding"
"LOC_Os11g10750","No alias","Oryza sativa","OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed","protein_coding"
"LOC_Os11g14990","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g30360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g30760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g32260","No alias","Oryza sativa","lysosomal alpha-mannosidase precursor, putative, expressed","protein_coding"
"LOC_Os11g36340","No alias","Oryza sativa","lymphoid organ expressed yellow head virus receptor protein, putative, expressed","protein_coding"
"LOC_Os11g48020","No alias","Oryza sativa","fatty acid hydroxylase, putative, expressed","protein_coding"
"LOC_Os12g01550","No alias","Oryza sativa","DUF260 domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g02100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g06650","No alias","Oryza sativa","tetratricopeptide-like helical, putative, expressed","protein_coding"
"LOC_Os12g07720","No alias","Oryza sativa","RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed","protein_coding"
"LOC_Os12g11550","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g31748","No alias","Oryza sativa","OsMADS20 - MADS-box family gene with MIKCc type-box, expressed","protein_coding"
"LOC_Os12g36910","No alias","Oryza sativa","calmodulin binding protein, putative, expressed","protein_coding"
"LOC_Os12g38150","No alias","Oryza sativa","osmotin, putative, expressed","protein_coding"
"LOC_Os12g38270","No alias","Oryza sativa","metallothionein, putative, expressed","protein_coding"
"LOC_Os12g39160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g40890","No alias","Oryza sativa","OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed","protein_coding"
"LOC_Os12g41210","No alias","Oryza sativa","tesmin/TSO1-like CXC domain containing protein, expressed","protein_coding"
"LOC_Os12g42140","No alias","Oryza sativa","G-patch domain containing protein, putative, expressed","protein_coding"
"MA_101290g0010","No alias","Picea abies","(at1g32450 : 330.0) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.; nitrate transporter 1.5 (NRT1.5); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: NITRATE TRANSPORTER 1.8 (TAIR:AT4G21680.1); Has 7755 Blast hits to 7381 proteins in 1434 species: Archae - 0; Bacteria - 3851; Metazoa - 707; Fungi - 433; Plants - 2214; Viruses - 0; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"MA_10243490g0010","No alias","Picea abies","(at2g17140 : 636.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62164 Blast hits to 14567 proteins in 313 species: Archae - 6; Bacteria - 60; Metazoa - 703; Fungi - 1051; Plants - 58243; Viruses - 0; Other Eukaryotes - 2101 (source: NCBI BLink). & (q76c99|rf1_orysa : 337.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1272.0) &  (original description: no original description)","protein_coding"
"MA_10425784g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10426118g0010","No alias","Picea abies","(at5g47750 : 132.0) D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p47997|g11a_orysa : 119.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"MA_10426126g0010","No alias","Picea abies","(at5g58220 : 234.0) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1  (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"MA_10426170g0010","No alias","Picea abies","(at1g69640 : 361.0) Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.; sphingoid base hydroxylase 1 (SBH1); CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1); Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0; Bacteria - 406; Metazoa - 416; Fungi - 708; Plants - 429; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 722.0) &  (original description: no original description)","protein_coding"
"MA_10427730g0010","No alias","Picea abies","(at1g42550 : 184.0) Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.; PLASTID MOVEMENT IMPAIRED1 (PMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast relocation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G20610.1); Has 1448 Blast hits to 1079 proteins in 174 species: Archae - 4; Bacteria - 103; Metazoa - 395; Fungi - 128; Plants - 164; Viruses - 85; Other Eukaryotes - 569 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"MA_10427749g0010","No alias","Picea abies","(at4g38500 : 627.0) Protein of unknown function (DUF616); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT1G28240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1254.0) &  (original description: no original description)","protein_coding"
"MA_10428144g0010","No alias","Picea abies","(at2g02040 : 443.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"MA_10428243g0010","No alias","Picea abies","(at1g15500 : 719.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 704.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1436.0) &  (original description: no original description)","protein_coding"
"MA_10428889g0010","No alias","Picea abies","(q43715|toc75_pea : 492.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (at3g46740 : 488.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 976.0) &  (original description: no original description)","protein_coding"
"MA_10428991g0010","No alias","Picea abies","(at5g24690 : 443.0) INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 886.0) &  (original description: no original description)","protein_coding"
"MA_10429958g0020","No alias","Picea abies","(at2g35030 : 282.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 50772 Blast hits to 15060 proteins in 312 species: Archae - 12; Bacteria - 55; Metazoa - 198; Fungi - 231; Plants - 49530; Viruses - 0; Other Eukaryotes - 746 (source: NCBI BLink). & (q76c99|rf1_orysa : 120.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"MA_10430096g0010","No alias","Picea abies","(at1g19250 : 478.0) FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.; flavin-dependent monooxygenase 1 (FMO1); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: stem, leaf whorl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing amine oxidase (InterPro:IPR001613), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT5G45180.1); Has 7639 Blast hits to 7432 proteins in 837 species: Archae - 6; Bacteria - 3396; Metazoa - 753; Fungi - 1311; Plants - 833; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). & (reliability: 956.0) &  (original description: no original description)","protein_coding"
"MA_10430106g0010","No alias","Picea abies","(at1g16730 : 124.0) unknown protein 6 (UP6); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"MA_10430406g0010","No alias","Picea abies","(at5g37830 : 1560.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3120.0) &  (original description: no original description)","protein_coding"
"MA_10430406g0030","No alias","Picea abies","(at5g37830 : 391.0) Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.; oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 782.0) &  (original description: no original description)","protein_coding"
"MA_10430460g0010","No alias","Picea abies","(at5g09760 : 410.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (q43062|pme_prupe : 295.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 792.0) &  (original description: no original description)","protein_coding"
"MA_10430584g0010","No alias","Picea abies","(q07423|hex6_ricco : 186.0) Hexose carrier protein HEX6 - Ricinus communis (Castor bean) & (at3g19930 : 177.0) Encodes a sucrose hydrogen symporter that is induced by wounding.; sugar transporter 4 (STP4); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: defense response to fungus, response to wounding, sucrose transport; LOCATED IN: plasma membrane, integral to plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G19940.1); Has 29502 Blast hits to 28992 proteins in 2095 species: Archae - 505; Bacteria - 13835; Metazoa - 4159; Fungi - 7125; Plants - 2571; Viruses - 2; Other Eukaryotes - 1305 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"MA_10430707g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10431227g0020","No alias","Picea abies","(at3g57430 : 629.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1258.0) &  (original description: no original description)","protein_coding"
"MA_10431257g0010","No alias","Picea abies","(at5g05310 : 206.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"MA_10431764g0010","No alias","Picea abies","(at5g41460 : 568.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"MA_10432069g0020","No alias","Picea abies","(at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24146|4cl2_tobac : 270.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"MA_10432239g0010","No alias","Picea abies","(q8s7e1|cao_orysa : 456.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (at1g44446 : 454.0) Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> .  Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 908.0) &  (original description: no original description)","protein_coding"
"MA_10432273g0010","No alias","Picea abies","(at3g05480 : 326.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"MA_10432580g0010","No alias","Picea abies","(at5g62000 : 779.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"MA_10432670g0010","No alias","Picea abies","(at3g02010 : 607.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 47268 Blast hits to 13605 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 64; Fungi - 106; Plants - 46551; Viruses - 0; Other Eukaryotes - 545 (source: NCBI BLink). & (q76c99|rf1_orysa : 164.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"MA_10433419g0010","No alias","Picea abies","(at5g47790 : 367.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein  (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24381|tlc1_soltu : 103.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"MA_10434415g0010","No alias","Picea abies","(at5g62500 : 186.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1B (EB1B); FUNCTIONS IN: microtubule binding; INVOLVED IN: thigmotropism, cytoskeleton organization, positive gravitropism; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1005 Blast hits to 968 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 581; Fungi - 144; Plants - 110; Viruses - 3; Other Eukaryotes - 167 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"MA_10435012g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435791g0010","No alias","Picea abies","(at2g38280 : 604.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 585.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (reliability: 1208.0) &  (original description: no original description)","protein_coding"
"MA_10436186g0010","No alias","Picea abies","(o22101|hemh_orysa : 297.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (at2g30390 : 292.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis.  FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (reliability: 584.0) &  (original description: no original description)","protein_coding"
"MA_10436188g0010","No alias","Picea abies","(q53ni2|nadk2_orysa : 721.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 719.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 1438.0) &  (original description: no original description)","protein_coding"
"MA_10436772g0010","No alias","Picea abies","(p08926|ruba_pea : 701.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 700.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding.  Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (reliability: 1400.0) &  (original description: no original description)","protein_coding"
"MA_10436831g0010","No alias","Picea abies","(at3g25690 : 456.0) actin binding protein required for normal chloroplast positioning; CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1). & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"MA_108494g0010","No alias","Picea abies","(p13240|dr206_pea : 222.0) Disease resistance response protein 206 - Pisum sativum (Garden pea) & (at1g64160 : 185.0) Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: petal, hypocotyl, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G23690.1); Has 792 Blast hits to 791 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 792; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"MA_108793g0010","No alias","Picea abies","(at1g59870 : 1600.0) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at  infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acidñdependent manner. Required for mlo resistance.  Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.; PENETRATION 3 (PEN3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, cadmium ion transmembrane transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, plasma membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 7 (TAIR:AT1G15210.1); Has 392230 Blast hits to 282257 proteins in 3986 species: Archae - 7583; Bacteria - 315608; Metazoa - 9692; Fungi - 7346; Plants - 6702; Viruses - 4; Other Eukaryotes - 45295 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 1576.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 3200.0) &  (original description: no original description)","protein_coding"
"MA_114511g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_123466g0010","No alias","Picea abies","(at3g57430 : 553.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 105.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1002.0) &  (original description: no original description)","protein_coding"
"MA_125123g0020","No alias","Picea abies","(at4g14605 : 94.7) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1482 Blast hits to 884 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 1279; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"MA_130735g0010","No alias","Picea abies","(at4g13650 : 562.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 140.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1124.0) &  (original description: no original description)","protein_coding"
"MA_14663g0020","No alias","Picea abies","(at4g36220 : 335.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o48923|c71da_soybn : 323.0) Cytochrome P450 71D10 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"MA_15537g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_15876g0010","No alias","Picea abies","(at4g02990 : 470.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G44020.1); Has 1500 Blast hits to 957 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 3; Plants - 1315; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 940.0) &  (original description: no original description)","protein_coding"
"MA_163708g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_164577g0010","No alias","Picea abies","(at2g02450 : 177.0) NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 148.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"MA_167441g0010","No alias","Picea abies","(at3g15970 : 288.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT1G52380.1); Has 4078 Blast hits to 2719 proteins in 441 species: Archae - 18; Bacteria - 1103; Metazoa - 1379; Fungi - 710; Plants - 228; Viruses - 8; Other Eukaryotes - 632 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"MA_17181g0010","No alias","Picea abies","(at5g40200 : 738.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1476.0) &  (original description: no original description)","protein_coding"
"MA_17525g0010","No alias","Picea abies","(at5g27280 : 175.0) Zim17-type zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT1G68730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"MA_187850g0010","No alias","Picea abies","(at4g30825 : 404.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 144.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"MA_19715g0020","No alias","Picea abies","(at2g13600 : 542.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 168.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1084.0) &  (original description: no original description)","protein_coding"
"MA_20168g0010","No alias","Picea abies","(at3g26782 : 533.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G33990.1); Has 38241 Blast hits to 13696 proteins in 226 species: Archae - 0; Bacteria - 8; Metazoa - 60; Fungi - 36; Plants - 37696; Viruses - 0; Other Eukaryotes - 441 (source: NCBI BLink). & (q76c99|rf1_orysa : 99.4) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 982.0) &  (original description: no original description)","protein_coding"
"MA_20260g0010","No alias","Picea abies","(at1g04510 : 722.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19.  Associated with the MOS4-Associated Complex (MAC).  Involved in plant innate immunity.; MOS4-associated  complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated  complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1408.0) &  (original description: no original description)","protein_coding"
"MA_2054728g0010","No alias","Picea abies","(at5g16080 : 122.0) carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6l545|gid1_orysa : 100.0) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) - Oryza sativa (Rice) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"MA_20746g0010","No alias","Picea abies","(at1g11290 : 522.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 948.0) &  (original description: no original description)","protein_coding"
"MA_21385g0010","No alias","Picea abies","(at1g16720 : 349.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA.  Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits.  The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 698.0) &  (original description: no original description)","protein_coding"
"MA_238344g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_239669g0010","No alias","Picea abies","(at5g63420 : 97.1) embryo defective 2746 (emb2746); FUNCTIONS IN: hydrolase activity, DNA binding, catalytic activity; INVOLVED IN: metabolic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"MA_24661g0010","No alias","Picea abies","(at5g49920 : 137.0) Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G46920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"MA_2473g0010","No alias","Picea abies","(at3g12770 : 597.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor  22 (MEF22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 43523 Blast hits to 14475 proteins in 290 species: Archae - 0; Bacteria - 15; Metazoa - 148; Fungi - 158; Plants - 42447; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (gnl|cdd|68872 : 81.2) no description available & (reliability: 1120.0) &  (original description: no original description)","protein_coding"
"MA_27394g0010","No alias","Picea abies","(at1g06990 : 243.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G24560.1); Has 3486 Blast hits to 3444 proteins in 207 species: Archae - 0; Bacteria - 314; Metazoa - 0; Fungi - 25; Plants - 3124; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (p40603|apg_brana : 163.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"MA_27726g0010","No alias","Picea abies","(at1g15510 : 744.0) Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis.; EARLY CHLOROPLAST BIOGENESIS2 (ECB2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 49765 Blast hits to 13993 proteins in 266 species: Archae - 0; Bacteria - 6; Metazoa - 64; Fungi - 140; Plants - 48782; Viruses - 0; Other Eukaryotes - 773 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1488.0) &  (original description: no original description)","protein_coding"
"MA_3228g0010","No alias","Picea abies","(at1g22882 : 400.0) Galactose-binding protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Sad1/UNC-like, C-terminal (InterPro:IPR012919), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Galactose-binding protein (TAIR:AT1G71360.1); Has 2190 Blast hits to 1928 proteins in 337 species: Archae - 60; Bacteria - 185; Metazoa - 803; Fungi - 277; Plants - 164; Viruses - 19; Other Eukaryotes - 682 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"MA_3346003g0010","No alias","Picea abies","(at5g35430 : 115.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 227 Blast hits to 213 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 158; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"MA_34492g0010","No alias","Picea abies","(at3g57430 : 429.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"MA_34492g0020","No alias","Picea abies","(at3g03580 : 414.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 54534 Blast hits to 14239 proteins in 270 species: Archae - 2; Bacteria - 13; Metazoa - 57; Fungi - 143; Plants - 53473; Viruses - 0; Other Eukaryotes - 846 (source: NCBI BLink). & (q76c99|rf1_orysa : 147.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 828.0) &  (original description: no original description)","protein_coding"
"MA_3456581g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_374514g0010","No alias","Picea abies","(at5g16715 : 353.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"MA_3928409g0010","No alias","Picea abies","(at4g28080 : 84.7) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"MA_40335g0010","No alias","Picea abies","(at5g62000 : 752.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 1504.0) &  (original description: no original description)","protein_coding"
"MA_403891g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_4273860g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_427539g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_4735g0010","No alias","Picea abies","(at3g53000 : 315.0) phloem protein 2-A15 (PP2-A15); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-A12 (TAIR:AT1G12710.1); Has 510 Blast hits to 504 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 510; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"MA_50118g0010","No alias","Picea abies","(at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 54534 Blast hits to 14239 proteins in 270 species: Archae - 2; Bacteria - 13; Metazoa - 57; Fungi - 143; Plants - 53473; Viruses - 0; Other Eukaryotes - 846 (source: NCBI BLink). & (q76c99|rf1_orysa : 149.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1342.0) &  (original description: no original description)","protein_coding"
"MA_51694g0010","No alias","Picea abies","(at2g22070 : 661.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G25360.1); Has 47939 Blast hits to 14346 proteins in 287 species: Archae - 0; Bacteria - 20; Metazoa - 98; Fungi - 122; Plants - 46979; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink). & (q76c99|rf1_orysa : 161.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1322.0) &  (original description: no original description)","protein_coding"
"MA_52319g0030","No alias","Picea abies","(at5g46920 : 920.0) Intron maturase, type II family protein; FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity; INVOLVED IN: RNA-dependent DNA replication, RNA splicing; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Intron maturase, type II (InterPro:IPR000442), RNA-directed DNA polymerase (reverse transcriptase) (InterPro:IPR000477); BEST Arabidopsis thaliana protein match is: Intron maturase, type II family protein (TAIR:AT1G30010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p38456|ymf11_marpo : 141.0) Hypothetical 83.1 kDa protein in COB-ATPA intergenic region (ORF 732) - Marchantia polymorpha (Liverwort) & (reliability: 1840.0) &  (original description: no original description)","protein_coding"
"MA_5255515g0010","No alias","Picea abies","(at5g64950 : 84.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"MA_525914g0010","No alias","Picea abies","(at1g11290 : 644.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 118.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"MA_55648g0010","No alias","Picea abies","(at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 117.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1180.0) &  (original description: no original description)","protein_coding"
"MA_577114g0010","No alias","Picea abies","(at1g34300 : 221.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 122.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"MA_5849416g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_61037g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_61422g0020","No alias","Picea abies","(at4g13650 : 721.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 159.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1442.0) &  (original description: no original description)","protein_coding"
"MA_640827g0010","No alias","Picea abies","(at4g02750 : 680.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 158.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1360.0) &  (original description: no original description)","protein_coding"
"MA_64083g0010","No alias","Picea abies","(at1g11290 : 632.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 128.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1264.0) &  (original description: no original description)","protein_coding"
"MA_6456g0020","No alias","Picea abies","(at2g36800 : 196.0) Encodes a DON-Glucosyltransferase.  The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.; don-glucosyltransferase 1 (DOGT1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73C6 (TAIR:AT2G36790.1); Has 7663 Blast hits to 7564 proteins in 401 species: Archae - 0; Bacteria - 196; Metazoa - 2172; Fungi - 32; Plants - 5134; Viruses - 64; Other Eukaryotes - 65 (source: NCBI BLink). & (p56725|zox_phavu : 134.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"MA_653417g0010","No alias","Picea abies","(at4g13650 : 731.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 134.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"MA_6570g0010","No alias","Picea abies","(at1g76990 : 513.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1026.0) &  (original description: no original description)","protein_coding"
"MA_681272g0010","No alias","Picea abies","(at3g46790 : 439.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"MA_69436g0010","No alias","Picea abies","(at5g61400 : 432.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 271.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"MA_73153g0010","No alias","Picea abies","(p33530|phya1_tobac : 1075.0) Phytochrome A1 - Nicotiana tabacum (Common tobacco) & (at2g18790 : 987.0) Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.; phytochrome B (PHYB); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome D (TAIR:AT4G16250.1); Has 25059 Blast hits to 24774 proteins in 3701 species: Archae - 266; Bacteria - 19279; Metazoa - 9; Fungi - 493; Plants - 3930; Viruses - 5; Other Eukaryotes - 1077 (source: NCBI BLink). & (reliability: 1974.0) &  (original description: no original description)","protein_coding"
"MA_77437g0010","No alias","Picea abies","(at1g11290 : 636.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 146.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1272.0) &  (original description: no original description)","protein_coding"
"MA_78196g0010","No alias","Picea abies","(at4g02990 : 462.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G44020.1); Has 1500 Blast hits to 957 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 3; Plants - 1315; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"MA_78267g0010","No alias","Picea abies",""(at3g48310 : 197.0) putative cytochrome P450; ""cytochrome P450, family 71, subfamily A, polypeptide 22"" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (p37118|c71a2_solme : 174.0) Cytochrome P450 71A2 (EC 1.14.-.-) (CYPLXXIA2) (P-450EG4) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 394.0) &  (original description: no original description)"","protein_coding"
"MA_794171g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_80970g0010","No alias","Picea abies","(at1g11290 : 615.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1230.0) &  (original description: no original description)","protein_coding"
"MA_842546g0010","No alias","Picea abies","(at5g48800 : 609.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5ks50|nph3_orysa : 284.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"MA_85955g0010","No alias","Picea abies","(at1g19220 : 191.0) Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene.  In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.; auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"MA_8855g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_9208g0010","No alias","Picea abies","(at3g43120 : 92.4) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT5G20810.1); Has 1460 Blast hits to 1446 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1459; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p33083|ax6b_soybn : 80.9) Auxin-induced protein 6B - Glycine max (Soybean) & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"MA_937923g0010","No alias","Picea abies","(at1g16720 : 365.0) Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA.  Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits.  The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.; high chlorophyll fluorescence phenotype 173 (HCF173); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: photosystem II assembly, translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G18810.2); Has 1950 Blast hits to 1792 proteins in 453 species: Archae - 27; Bacteria - 1263; Metazoa - 9; Fungi - 6; Plants - 464; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"MA_93993g0010","No alias","Picea abies","(at1g17220 : 212.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 197.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"MA_94165g0010","No alias","Picea abies","(at1g11290 : 612.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 132.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1224.0) &  (original description: no original description)","protein_coding"
"MA_94565g0010","No alias","Picea abies","(at5g36230 : 387.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"MA_95163g0010","No alias","Picea abies","(at1g13770 : 100.0) ROOT UV-B SENSITIVE 3 (RUS3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"MA_9526611g0020","No alias","Picea abies","(at3g57430 : 726.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (q76c99|rf1_orysa : 139.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"MA_962052g0010","No alias","Picea abies","(at2g41250 : 337.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1); Has 5345 Blast hits to 5345 proteins in 1611 species: Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67; Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"MA_96682g0010","No alias","Picea abies","(at4g09670 : 389.0) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Glyceraldehyde-3-phosphate dehydrogenase-like family protein (TAIR:AT1G34200.1); Has 17148 Blast hits to 17147 proteins in 2160 species: Archae - 344; Bacteria - 12203; Metazoa - 250; Fungi - 605; Plants - 99; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"MA_9729170g0010","No alias","Picea abies","(at2g37050 : 220.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"Mp1g03430.1","No alias","Marchantia polymorpha","component RRP45 of exosome EXO9 core complex","protein_coding"
"Mp1g04100.1","No alias","Marchantia polymorpha","Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica (sp|q0jgs5|ear1_orysj : 193.0)","protein_coding"
"Mp1g06610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g12930.1","No alias","Marchantia polymorpha","GET3-recruitment component GET4 of GET4-GET5 scaffold subcomplex","protein_coding"
"Mp1g16290.1","No alias","Marchantia polymorpha","4-diphosphocytidyl-2-C-methyl-D-erythritol kinase","protein_coding"
"Mp1g16850.1","No alias","Marchantia polymorpha","component LHCb4 of LHC-II complex","protein_coding"
"Mp1g17530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g18780.1","No alias","Marchantia polymorpha","RNA chaperone (RZ1|GR-RBP)","protein_coding"
"Mp1g21210.1","No alias","Marchantia polymorpha","phosphoglucan phosphatase (SEX4)","protein_coding"
"Mp1g22270.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g23100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g23300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g24460.1","No alias","Marchantia polymorpha","SNF1-related protein kinase (SnRK2)","protein_coding"
"Mp1g24470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g24510.1","No alias","Marchantia polymorpha","protein factor (USP39) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp1g25250.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g04070.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana (sp|q9m907|pp217_arath : 281.0)","protein_coding"
"Mp2g06670.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g07610.1","No alias","Marchantia polymorpha","MAPK-kinase (NQK/ANQ). protein kinase (MAPKK)","protein_coding"
"Mp2g08950.1","No alias","Marchantia polymorpha","MAP-kinase (NRK/MPK). protein kinase (MAPK)","protein_coding"
"Mp2g13700.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16380.1","No alias","Marchantia polymorpha","no description available(sp|a0a0p0v5u9|yuc1_orysj : 114.0)","protein_coding"
"Mp2g17160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g18940.1","No alias","Marchantia polymorpha","Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica (sp|b8ae37|hdr1_orysi : 135.0)","protein_coding"
"Mp2g26790.1","No alias","Marchantia polymorpha","pepsin-type protease","protein_coding"
"Mp3g00120.1","No alias","Marchantia polymorpha","target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes","protein_coding"
"Mp3g01990.1","No alias","Marchantia polymorpha","component eIF3e of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Mp3g04720.1","No alias","Marchantia polymorpha","Synaptotagmin-4 OS=Arabidopsis thaliana (sp|a0jjx5|syt4_arath : 294.0)","protein_coding"
"Mp3g06420.1","No alias","Marchantia polymorpha","component CSN5 of COP9 signalosome complex","protein_coding"
"Mp3g07840.1","No alias","Marchantia polymorpha","component LHCa4 of LHC-I complex","protein_coding"
"Mp3g10850.1","No alias","Marchantia polymorpha","pheophorbide a oxygenase (PAO)","protein_coding"
"Mp3g15580.1","No alias","Marchantia polymorpha","deubiquitinase recruiting protein (BRO1)","protein_coding"
"Mp3g20790.1","No alias","Marchantia polymorpha","pantothenate kinase","protein_coding"
"Mp3g21300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g21350.1","No alias","Marchantia polymorpha","allene oxidase synthase (AOS)","protein_coding"
"Mp3g23110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g01240.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g02010.1","No alias","Marchantia polymorpha","component MED19 of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Mp4g06880.1","No alias","Marchantia polymorpha","component PsaK of PS-I complex","protein_coding"
"Mp4g07510.1","No alias","Marchantia polymorpha","component PsbQ of PS-II oxygen-evolving center","protein_coding"
"Mp4g11980.1","No alias","Marchantia polymorpha","Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica (sp|q6z4n6|40g2_orysj : 144.0)","protein_coding"
"Mp4g12120.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g12830.1","No alias","Marchantia polymorpha","group-II formin actin filament elongation factor","protein_coding"
"Mp4g15510.1","No alias","Marchantia polymorpha","oligopeptide transporter (OPT)","protein_coding"
"Mp4g15980.1","No alias","Marchantia polymorpha","RNA chaperone (RZ1|GR-RBP)","protein_coding"
"Mp4g20410.1","No alias","Marchantia polymorpha","component PsaN of PS-I complex","protein_coding"
"Mp4g21400.1","No alias","Marchantia polymorpha","receptor-like protein kinase (RLCK-XV)","protein_coding"
"Mp5g04230.1","No alias","Marchantia polymorpha","component Y14 of RNA quality control Exon Junction complex","protein_coding"
"Mp5g15020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g15130.1","No alias","Marchantia polymorpha","cationic amino acid transporter (CAT)","protein_coding"
"Mp5g17730.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 203.1) & Cytochrome P450 76C1 OS=Arabidopsis thaliana (sp|o64636|c76c1_arath : 172.0)","protein_coding"
"Mp5g19290.1","No alias","Marchantia polymorpha","Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana (sp|q9fg36|trl31_arath : 157.0)","protein_coding"
"Mp5g22560.1","No alias","Marchantia polymorpha","PP6 phosphatase","protein_coding"
"Mp6g00500.1","No alias","Marchantia polymorpha","Non-symbiotic hemoglobin 0 OS=Physcomitrella patens subsp. patens (sp|q9m630|hbl0_phypa : 149.0)","protein_coding"
"Mp6g03510.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05070.1","No alias","Marchantia polymorpha","Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana (sp|q9zvn2|y1457_arath : 478.0)","protein_coding"
"Mp6g07930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g08740.1","No alias","Marchantia polymorpha","Protein BTR1 OS=Arabidopsis thaliana (sp|q9lz82|btr1_arath : 252.0)","protein_coding"
"Mp6g10240.1","No alias","Marchantia polymorpha","ATP:ADP antiporter (NTT)","protein_coding"
"Mp6g11410.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g11470.1","No alias","Marchantia polymorpha","component E1 of 2-oxoglutarate dehydrogenase complex","protein_coding"
"Mp6g12670.1","No alias","Marchantia polymorpha","small component SAE1 of SUMO activating E1 complex","protein_coding"
"Mp6g12710.1","No alias","Marchantia polymorpha","Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana (sp|q9zsp5|air3_arath : 570.0)","protein_coding"
"Mp6g15040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g15060.1","No alias","Marchantia polymorpha","membrane-associated AMP deaminase","protein_coding"
"Mp6g15310.1","No alias","Marchantia polymorpha","catalytic component PP2A-phosphatase of TON1-TRM-PP2A (TTP) preprophase band formation complex. catalytic component C of PP2A phosphatase complexes","protein_coding"
"Mp6g16850.1","No alias","Marchantia polymorpha","peroxisomal fatty acid transporter (PXA1). subfamily ABCD transporter","protein_coding"
"Mp6g17330.1","No alias","Marchantia polymorpha","delta-8 sphingolipid desaturase","protein_coding"
"Mp6g18140.1","No alias","Marchantia polymorpha","aminoacyl-tRNA binding factor (eEF1A)","protein_coding"
"Mp6g18150.1","No alias","Marchantia polymorpha","component TWD40 of TPLATE AP-2 co-adaptor complex","protein_coding"
"Mp6g18440.1","No alias","Marchantia polymorpha","component PsaG of PS-I complex","protein_coding"
"Mp6g18540.1","No alias","Marchantia polymorpha","vacuolar sorting receptor (VSR)","protein_coding"
"Mp6g18970.1","No alias","Marchantia polymorpha","cytosolic alpha-glucan phosphorylase","protein_coding"
"Mp6g21520.1","No alias","Marchantia polymorpha","solute transporter (NAT)","protein_coding"
"Mp7g00620.1","No alias","Marchantia polymorpha","GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana (sp|q9m153|gdl61_arath : 254.0)","protein_coding"
"Mp7g01740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g04520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g05180.1","No alias","Marchantia polymorpha","component SR-alpha of SRP (signal recognition particle) receptor complex","protein_coding"
"Mp7g05560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g05760.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 353.3) & Isoflavone reductase homolog PCBER OS=Populus trichocarpa (sp|b9hrl7|pcber_poptr : 281.0)","protein_coding"
"Mp7g06100.1","No alias","Marchantia polymorpha","microtubule-stabilizing factor (WDL)","protein_coding"
"Mp7g06570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g09100.1","No alias","Marchantia polymorpha","chromatin-silencing modulator (BLI)","protein_coding"
"Mp7g09630.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g13760.1","No alias","Marchantia polymorpha","transcription factor (DREB)","protein_coding"
"Mp7g16860.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g18150.1","No alias","Marchantia polymorpha","component PsaL of PS-I complex","protein_coding"
"Mp8g01210.1","No alias","Marchantia polymorpha","component PsaO of PS-I complex","protein_coding"
"Mp8g04560.1","No alias","Marchantia polymorpha","Aldehyde oxidase GLOX OS=Vitis pseudoreticulata (sp|q3hrq2|glox_vitps : 525.0)","protein_coding"
"Mp8g05810.1","No alias","Marchantia polymorpha","catalytic subunit alpha of CK-II protein kinase","protein_coding"
"Mp8g06160.1","No alias","Marchantia polymorpha","enoyl-CoA hydratase","protein_coding"
"Mp8g06820.1","No alias","Marchantia polymorpha","component VPS2/CHMP2 of ESCRT-III complex","protein_coding"
"Mp8g06980.1","No alias","Marchantia polymorpha","component NSH2 of NSH1-NSH2 nucleoside hydrolase heterodimer","protein_coding"
"Mp8g07080.1","No alias","Marchantia polymorpha","protease (SBT5)","protein_coding"
"Mp8g07200.1","No alias","Marchantia polymorpha","component SEC3 of Exocyst complex","protein_coding"
"Mp8g09340.1","No alias","Marchantia polymorpha","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis (sp|p81898|pnaa_prudu : 398.0)","protein_coding"
"Mp8g09760.1","No alias","Marchantia polymorpha","O-acetylserine sulfydrylase","protein_coding"
"Mp8g12930.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)(50.1.12 : 805.9) & Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum (sp|q43190|lox14_soltu : 681.0)","protein_coding"
"Mp8g14180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g14970.1","No alias","Marchantia polymorpha","ssRNA polymerase (RDR6)","protein_coding"
"Mp8g15740.1","No alias","Marchantia polymorpha","Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana (sp|p42737|bca2_arath : 204.0)","protein_coding"
"Mp8g16870.1","No alias","Marchantia polymorpha","associated component ETG1 of MCM replicative DNA helicase complex","protein_coding"
"Mp8g16880.1","No alias","Marchantia polymorpha","zinc metalloprotease (OMA1)","protein_coding"
"Mp8g17440.1","No alias","Marchantia polymorpha","PEP carboxylase","protein_coding"
"Potri.001G175200","No alias","Populus trichocarpa","nucleotide transporter 1","protein_coding"
"Potri.003G058900","No alias","Populus trichocarpa","nucleotide transporter 1","protein_coding"
"Potri.019G048700","No alias","Populus trichocarpa","TLC ATP/ADP transporter","protein_coding"
"Pp1s101_245V6","No alias","Physcomitrella patens","possible inorganic carbon transport protein","protein_coding"
"Pp1s104_88V6","No alias","Physcomitrella patens","fructose-bisphosphate aldolase","protein_coding"
"Pp1s105_137V6","No alias","Physcomitrella patens","abc transporter-like protein","protein_coding"
"Pp1s106_30V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s109_93V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s10_132V6","No alias","Physcomitrella patens","imbibition protein homolog","protein_coding"
"Pp1s110_30V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s112_254V6","No alias","Physcomitrella patens","T26G12.12; hydrolase, alpha/beta fold family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s118_140V6","No alias","Physcomitrella patens","nol1 nop2 sun domain member 6","protein_coding"
"Pp1s121_167V6","No alias","Physcomitrella patens","cdk-activating kinase","protein_coding"
"Pp1s126_186V6","No alias","Physcomitrella patens","iron-binding protein","protein_coding"
"Pp1s130_191V6","No alias","Physcomitrella patens","cell elongation protein","protein_coding"
"Pp1s130_42V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s137_104V6","No alias","Physcomitrella patens","MZE19.2; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s13_344V6","No alias","Physcomitrella patens","UPF0187 protein At3g61320, chloroplast precursor [Arabidopsis thaliana]","protein_coding"
"Pp1s143_174V6","No alias","Physcomitrella patens","glucose-6-phosphate translocator","protein_coding"
"Pp1s144_30V6","No alias","Physcomitrella patens","multi-sensor hybrid histidine kinase","protein_coding"
"Pp1s144_73V6","No alias","Physcomitrella patens","nucleobase ascorbate transporter","protein_coding"
"Pp1s149_180V6","No alias","Physcomitrella patens","cycling dof factor 2","protein_coding"
"Pp1s156_44V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s159_135V6","No alias","Physcomitrella patens","protein kinase","protein_coding"
"Pp1s15_123V6","No alias","Physcomitrella patens","carboxypeptidase d","protein_coding"
"Pp1s162_151V6","No alias","Physcomitrella patens","serine threonine-protein kinase","protein_coding"
"Pp1s162_74V6","No alias","Physcomitrella patens","mgc80425 protein","protein_coding"
"Pp1s167_1V6","No alias","Physcomitrella patens","gdp dissociation inhibitor","protein_coding"
"Pp1s169_68V6","No alias","Physcomitrella patens","plastidic atp adp transporter","protein_coding"
"Pp1s177_19V6","No alias","Physcomitrella patens","F22H5.20; SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s180_26V6","No alias","Physcomitrella patens","atp-binding cassette","protein_coding"
"Pp1s194_80V6","No alias","Physcomitrella patens","F18O14.29; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s19_33V6","No alias","Physcomitrella patens","guanine nucleotide-","protein_coding"
"Pp1s1_173V6","No alias","Physcomitrella patens","T4C15.10; VQ motif-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s1_863V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s1_864V6","No alias","Physcomitrella patens","T7M7.16; abscisic acid-insensitive 4 (ABI4) [Arabidopsis thaliana]","protein_coding"
"Pp1s200_23V6","No alias","Physcomitrella patens","starch branching enzyme ii","protein_coding"
"Pp1s206_101V6","No alias","Physcomitrella patens","sh3 domain containing expressed","protein_coding"
"Pp1s20_229V6","No alias","Physcomitrella patens","adenosylhomocysteinase s-adenosyl-l-homocysteine hydrolase","protein_coding"
"Pp1s219_3V6","No alias","Physcomitrella patens","annexin a4","protein_coding"
"Pp1s223_31V6","No alias","Physcomitrella patens","aspartate aminotransferase","protein_coding"
"Pp1s224_84V6","No alias","Physcomitrella patens","probable oxidoreductase c10orf33","protein_coding"
"Pp1s22_276V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s234_71V6","No alias","Physcomitrella patens","cytosolic delta subunit","protein_coding"
"Pp1s23_281V6","No alias","Physcomitrella patens","dihydrodipicolinate synthase","protein_coding"
"Pp1s23_38V6","No alias","Physcomitrella patens","betaine aldehyde dehydrogenase","protein_coding"
"Pp1s241_40V6","No alias","Physcomitrella patens","uridylate kinase","protein_coding"
"Pp1s242_6V6","No alias","Physcomitrella patens","pan3 polya specific ribonuclease subunit homolog ( cerevisiae)","protein_coding"
"Pp1s243_59V6","No alias","Physcomitrella patens","tubulin-specific chaperone c-related","protein_coding"
"Pp1s245_59V6","No alias","Physcomitrella patens","transferring glycosyl","protein_coding"
"Pp1s246_64V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s251_31V6","No alias","Physcomitrella patens","lipase class 3 family protein","protein_coding"
"Pp1s255_29V6","No alias","Physcomitrella patens","fpa rna binding","protein_coding"
"Pp1s25_365V6","No alias","Physcomitrella patens","F2J10.21; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s25_97V6","No alias","Physcomitrella patens","F24J5.20; alpha-xylosidase (XYL1) [Arabidopsis thaliana]","protein_coding"
"Pp1s260_5V6","No alias","Physcomitrella patens","kiaa0683 geneisoform cra_a","protein_coding"
"Pp1s26_28V6","No alias","Physcomitrella patens","alliin lyase","protein_coding"
"Pp1s270_50V6","No alias","Physcomitrella patens","plastidic atp adp transporter","protein_coding"
"Pp1s270_51V6","No alias","Physcomitrella patens","2-oxoglutarate e1 subunit","protein_coding"
"Pp1s280_51V6","No alias","Physcomitrella patens","er lumen protein retaining receptor","protein_coding"
"Pp1s291_35V6","No alias","Physcomitrella patens","serine hydroxymethyltransferase","protein_coding"
"Pp1s29_335V6","No alias","Physcomitrella patens","F27G19.2; prenylated rab acceptor (PRA1) protein-related [Arabidopsis thaliana]","protein_coding"
"Pp1s29_54V6","No alias","Physcomitrella patens","chaperonin containingsubunit 7","protein_coding"
"Pp1s2_216V6","No alias","Physcomitrella patens","heat shock protein 70","protein_coding"
"Pp1s2_734V6","No alias","Physcomitrella patens","nadp-malic enzyme","protein_coding"
"Pp1s303_20V6","No alias","Physcomitrella patens","MYH9.21; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s307_16V6","No alias","Physcomitrella patens","sec14 cytosolic phosphoglyceride transfer","protein_coding"
"Pp1s307_72V6","No alias","Physcomitrella patens","radical sam cfr family","protein_coding"
"Pp1s31_169V6","No alias","Physcomitrella patens","fad dependent oxidoreductase","protein_coding"
"Pp1s31_291V6","No alias","Physcomitrella patens","type-b response regulator","protein_coding"
"Pp1s323_62V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s324_22V6","No alias","Physcomitrella patens","phospholipase d","protein_coding"
"Pp1s333_22V6","No alias","Physcomitrella patens","T7N9.26; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s338_65V6","No alias","Physcomitrella patens","glucose-6-phosphate 1-dehydrogenase","protein_coding"
"Pp1s33_390V6","No alias","Physcomitrella patens","g protein-coupled receptor-like protein","protein_coding"
"Pp1s341_58V6","No alias","Physcomitrella patens","phosphoenolpyruvate carboxylase","protein_coding"
"Pp1s345_5V6","No alias","Physcomitrella patens","transcription factor ice1-like","protein_coding"
"Pp1s347_23V6","No alias","Physcomitrella patens","methionyl-trna synthetase","protein_coding"
"Pp1s34_456V6","No alias","Physcomitrella patens","T22N19.40; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s355_57V6","No alias","Physcomitrella patens","K16L22.4; GTPase activator protein of Rab-related small GTPases-like protein [Arabidopsis thaliana]","protein_coding"
"Pp1s36_114V6","No alias","Physcomitrella patens","glucose-6-phosphate 1-dehydrogenase","protein_coding"
"Pp1s37_122V6","No alias","Physcomitrella patens","acyl- oxidase","protein_coding"
"Pp1s37_311V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s386_21V6","No alias","Physcomitrella patens","phosphoribosylformylglycinamidine synthase","protein_coding"
"Pp1s396_8V6","No alias","Physcomitrella patens","vacuolar protein sorting protein 18","protein_coding"
"Pp1s399_19V6","No alias","Physcomitrella patens","vitamin-b12 independent methionine 5-methyltetrahydropteroyltriglutamate-homocysteine","protein_coding"
"Pp1s3_467V6","No alias","Physcomitrella patens","constans interacting protein 5","protein_coding"
"Pp1s3_473V6","No alias","Physcomitrella patens","proteophosphoglycan ppg1 [Leishmania major]","protein_coding"
"Pp1s3_637V6","No alias","Physcomitrella patens","T6J4.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s405_31V6","No alias","Physcomitrella patens","diaminopimelate decarboxylase","protein_coding"
"Pp1s410_14V6","No alias","Physcomitrella patens","T15N1.30; proline-rich protein family [Arabidopsis thaliana]","protein_coding"
"Pp1s43_32V6","No alias","Physcomitrella patens","carbamoyl-phosphate large glutamine-dependent","protein_coding"
"Pp1s44_338V6","No alias","Physcomitrella patens","F9C22.2; F-box family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s455_6V6","No alias","Physcomitrella patens","aaa atpase central domain protein","protein_coding"
"Pp1s457_21V6","No alias","Physcomitrella patens","transmembrane protein","protein_coding"
"Pp1s45_86V6","No alias","Physcomitrella patens","chloroplastic quinone-oxidoreductase","protein_coding"
"Pp1s475_5V6","No alias","Physcomitrella patens","minor allergen alt","protein_coding"
"Pp1s47_230V6","No alias","Physcomitrella patens","zinc finger (c3hc4-type ring finger) family protein","protein_coding"
"Pp1s4_346V6","No alias","Physcomitrella patens","exocyst componenet","protein_coding"
"Pp1s51_288V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s56_136V6","No alias","Physcomitrella patens","MLN21.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s56_260V6","No alias","Physcomitrella patens","F5I6.26; nodulin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s58_256V6","No alias","Physcomitrella patens","26s proteasome subunit rpn5b","protein_coding"
"Pp1s59_361V6","No alias","Physcomitrella patens","wd-repeat protein","protein_coding"
"Pp1s65_73V6","No alias","Physcomitrella patens","zinc finger (ran-binding) family protein","protein_coding"
"Pp1s6_50V6","No alias","Physcomitrella patens","F24J5.20; alpha-xylosidase (XYL1) [Arabidopsis thaliana]","protein_coding"
"Pp1s72_181V6","No alias","Physcomitrella patens","F6I18.3; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s72_301V6","No alias","Physcomitrella patens","allene oxide synthase","protein_coding"
"Pp1s77_48V6","No alias","Physcomitrella patens","F13A10.8; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s77_89V6","No alias","Physcomitrella patens","F16M14.21; AMP deaminase, putative / myoadenylate deaminase, putative [EC:3.5.4.6] [KO:K01490] [Arabidopsis thaliana]","protein_coding"
"Pp1s79_21V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s79_62V6","No alias","Physcomitrella patens","T9L24.40; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s80_122V6","No alias","Physcomitrella patens","T1N24.19; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s83_164V6","No alias","Physcomitrella patens","F17H15.17; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s86_219V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s89_116V6","No alias","Physcomitrella patens","F3N11.21; ATP-dependent protease La (LON) domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s89_139V6","No alias","Physcomitrella patens","sucrose transporter","protein_coding"
"Pp1s89_161V6","No alias","Physcomitrella patens","fructose-bisphosphate aldolase","protein_coding"
"Pp1s89_26V6","No alias","Physcomitrella patens","T3G21.10; Bet v I allergen family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s8_52V6","No alias","Physcomitrella patens","atp-binding cassette superfamily","protein_coding"
"Pp1s8_53V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s92_91V6","No alias","Physcomitrella patens","uncharacterized protein kiaa0406","protein_coding"
"Pp1s95_118V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s97_277V6","No alias","Physcomitrella patens","cytochrome c","protein_coding"
"PSME_00000100-RA","No alias","Pseudotsuga menziesii","(at1g55090 : 257.0) carbon-nitrogen hydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: nitrogen compound metabolic process, NAD biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), NAD synthase (InterPro:IPR003694), Glutamine-dependent NAD(+) synthetase, GAT domain-containing (InterPro:IPR014445), NAD/GMP synthase (InterPro:IPR022310); Has 5923 Blast hits to 5903 proteins in 2409 species: Archae - 233; Bacteria - 4478; Metazoa - 145; Fungi - 142; Plants - 70; Viruses - 0; Other Eukaryotes - 855 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"PSME_00000138-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00000210-RA","No alias","Pseudotsuga menziesii","(at5g55860 : 155.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00000256-RA","No alias","Pseudotsuga menziesii","(at2g40460 : 710.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (reliability: 1420.0) &  (original description: no original description)","protein_coding"
"PSME_00000458-RA","No alias","Pseudotsuga menziesii","(at5g53140 : 134.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00000620-RA","No alias","Pseudotsuga menziesii","(at5g62530 : 734.0) Encodes mitochondrial Delta-pyrroline-5-  carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"PSME_00000815-RA","No alias","Pseudotsuga menziesii","(at5g23580 : 173.0) unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+; calmodulin-like domain protein kinase 9 (CDPK9); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53683|cdpk2_orysa : 151.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"PSME_00000973-RA","No alias","Pseudotsuga menziesii","(at2g28940 : 474.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 222.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 948.0) &  (original description: no original description)","protein_coding"
"PSME_00001228-RA","No alias","Pseudotsuga menziesii","(at3g57520 : 136.0) seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00001272-RA","No alias","Pseudotsuga menziesii","(at5g52040 : 295.0) encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.3); Has 11943 Blast hits to 9562 proteins in 408 species: Archae - 0; Bacteria - 134; Metazoa - 7691; Fungi - 1361; Plants - 1617; Viruses - 110; Other Eukaryotes - 1030 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00001322-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 206.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 202.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00001451-RA","No alias","Pseudotsuga menziesii","(at1g47510 : 177.0) Encodes a phosphatidylinositol  polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA.; inositol polyphosphate 5-phosphatase 11 (5PTASE11); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G65580.1). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00001498-RA","No alias","Pseudotsuga menziesii","(at2g16230 : 447.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G34480.1); Has 576 Blast hits to 566 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 566; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (p52409|e13b_wheat : 357.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"PSME_00001582-RA","No alias","Pseudotsuga menziesii","(q6k9n6|sucb_orysa : 650.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (at2g20420 : 639.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (reliability: 1278.0) &  (original description: no original description)","protein_coding"
"PSME_00001698-RA","No alias","Pseudotsuga menziesii",""(at3g13730 : 474.0) Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).; ""cytochrome P450, family 90, subfamily D, polypeptide 1"" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 468.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (reliability: 948.0) &  (original description: no original description)"","protein_coding"
"PSME_00002055-RA","No alias","Pseudotsuga menziesii","(at5g50850 : 587.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 578.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"PSME_00002188-RA","No alias","Pseudotsuga menziesii","(at2g17705 : 180.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08330.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 5; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"PSME_00002274-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002442-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 617.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"PSME_00002715-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 127.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 126.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00002882-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00003096-RA","No alias","Pseudotsuga menziesii","(at1g21065 : 111.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00003232-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 379.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 378.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00003434-RA","No alias","Pseudotsuga menziesii","(at1g20230 : 237.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G23330.1); Has 43615 Blast hits to 14351 proteins in 266 species: Archae - 0; Bacteria - 17; Metazoa - 112; Fungi - 108; Plants - 42635; Viruses - 0; Other Eukaryotes - 743 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00003492-RA","No alias","Pseudotsuga menziesii","(at1g49760 : 776.0) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (p28644|roc1_spiol : 91.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 1552.0) &  (original description: no original description)","protein_coding"
"PSME_00003697-RA","No alias","Pseudotsuga menziesii","(at3g02920 : 197.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"PSME_00003858-RA","No alias","Pseudotsuga menziesii","(at5g42190 : 87.0) Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.; E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: S phase kinase-associated protein 1 (TAIR:AT1G75950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"PSME_00003916-RA","No alias","Pseudotsuga menziesii","(at5g19990 : 730.0) 26S proteasome AAA-ATPase subunit; regulatory particle triple-A ATPase 6A (RPT6A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G20000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o64982|prs7_prupe : 340.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (reliability: 1460.0) &  (original description: no original description)","protein_coding"
"PSME_00003931-RA","No alias","Pseudotsuga menziesii","(at1g14410 : 85.1) Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.; WHIRLY 1 (WHY1); FUNCTIONS IN: DNA binding, telomeric DNA binding; INVOLVED IN: negative regulation of telomere maintenance via telomerase, defense response; LOCATED IN: plastid chromosome, chloroplast, nucleoid, telomerase holoenzyme complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Plant transcription factor (InterPro:IPR013742); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT2G02740.2); Has 106 Blast hits to 105 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00003955-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 276.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 275.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"PSME_00003974-RA","No alias","Pseudotsuga menziesii","(at1g64550 : 119.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00003980-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004298-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 123.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"PSME_00004299-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004382-RA","No alias","Pseudotsuga menziesii","(at2g28070 : 149.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: white-brown complex homolog protein 11 (TAIR:AT1G17840.1); Has 248098 Blast hits to 239858 proteins in 3812 species: Archae - 4857; Bacteria - 200822; Metazoa - 5202; Fungi - 4273; Plants - 3947; Viruses - 6; Other Eukaryotes - 28991 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00004627-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 208.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 203.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00004720-RA","No alias","Pseudotsuga menziesii","(at4g02780 : 125.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 119.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00004723-RA","No alias","Pseudotsuga menziesii","(p93665|dcs1_goshi : 94.7) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at4g16730 : 94.4) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 188.8) &  (original description: no original description)","protein_coding"
"PSME_00004730-RA","No alias","Pseudotsuga menziesii","(o64411|pao_maize : 350.0) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (at5g13700 : 310.0) Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).; polyamine oxidase 1 (PAO1); FUNCTIONS IN: FAD binding, polyamine oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 4 (TAIR:AT1G65840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00004756-RA","No alias","Pseudotsuga menziesii","(at4g02070 : 195.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00004757-RA","No alias","Pseudotsuga menziesii","(at4g02070 : 179.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00004838-RA","No alias","Pseudotsuga menziesii","(at1g12840 : 269.0) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase).  Bound and phosphorylated by AtWNK8.; DE-ETIOLATED 3 (DET3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: lignin biosynthetic process, regulation of carbohydrate biosynthetic process, unidimensional cell growth; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit C (InterPro:IPR004907); Has 563 Blast hits to 541 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (q9scb9|vatc_horvu : 238.0) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit) - Hordeum vulgare (Barley) & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"PSME_00004917-RA","No alias","Pseudotsuga menziesii","(at1g55320 : 559.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (reliability: 1118.0) &  (original description: no original description)","protein_coding"
"PSME_00004950-RA","No alias","Pseudotsuga menziesii","(at5g03300 : 545.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (o49923|adk_phypa : 499.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00005020-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00005206-RA","No alias","Pseudotsuga menziesii","(at3g07900 : 218.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 833 Blast hits to 829 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 833; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"PSME_00005456-RA","No alias","Pseudotsuga menziesii","(at5g16715 : 291.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"PSME_00005544-RA","No alias","Pseudotsuga menziesii","(at3g11830 : 861.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (p40412|tcpe1_avesa : 238.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1722.0) &  (original description: no original description)","protein_coding"
"PSME_00005636-RA","No alias","Pseudotsuga menziesii","(q41141|pfpb_ricco : 832.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 811.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (reliability: 1622.0) &  (original description: no original description)","protein_coding"
"PSME_00005721-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00005776-RA","No alias","Pseudotsuga menziesii","(at5g65280 : 301.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"PSME_00006377-RA","No alias","Pseudotsuga menziesii","(at3g51895 : 371.0) Encodes a sulfate transporter.; sulfate transporter 3;1 (SULTR3;1); FUNCTIONS IN: secondary active sulfate transmembrane transporter activity, transporter activity, sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 3;2 (TAIR:AT4G02700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02920|no70_soybn : 232.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 742.0) &  (original description: no original description)","protein_coding"
"PSME_00006378-RA","No alias","Pseudotsuga menziesii","(at2g17670 : 306.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 157.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00006431-RA","No alias","Pseudotsuga menziesii","(at5g17920 : 174.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (p93263|mete_mescr : 174.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Mesembryanthemum crystallinum (Common ice pl & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00006691-RA","No alias","Pseudotsuga menziesii","(at4g18020 : 220.0) Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).; APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00006916-RA","No alias","Pseudotsuga menziesii","(at1g02520 : 643.0) P-glycoprotein 11 (PGP11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 844961 Blast hits to 391444 proteins in 4162 species: Archae - 14749; Bacteria - 659839; Metazoa - 18308; Fungi - 13140; Plants - 9783; Viruses - 35; Other Eukaryotes - 129107 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 315.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1286.0) &  (original description: no original description)","protein_coding"
"PSME_00007311-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 196.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00007417-RA","No alias","Pseudotsuga menziesii","(at1g33390 : 609.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"PSME_00008073-RA","No alias","Pseudotsuga menziesii","(at2g38080 : 619.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (p24792|aso_cucma : 245.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00008350-RA","No alias","Pseudotsuga menziesii","(at3g11910 : 136.0) ubiquitin-specific protease 13 (UBP13); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 12 (TAIR:AT5G06600.2). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00008629-RA","No alias","Pseudotsuga menziesii","(at1g47530 : 122.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00008711-RA","No alias","Pseudotsuga menziesii","(at1g79210 : 134.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to bacterium, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome subunit PAB1 (TAIR:AT1G16470.2); Has 6770 Blast hits to 6769 proteins in 496 species: Archae - 887; Bacteria - 41; Metazoa - 2415; Fungi - 1555; Plants - 857; Viruses - 0; Other Eukaryotes - 1015 (source: NCBI BLink). & (q9lsu2|psa2_orysa : 128.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00008902-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 371.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 742.0) &  (original description: no original description)","protein_coding"
"PSME_00008920-RA","No alias","Pseudotsuga menziesii","(at4g25770 : 412.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G10040.1). & (reliability: 824.0) &  (original description: no original description)","protein_coding"
"PSME_00008985-RA","No alias","Pseudotsuga menziesii","(p93422|syh_orysa : 358.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (at3g02760 : 352.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 12532 Blast hits to 12512 proteins in 2976 species: Archae - 257; Bacteria - 7359; Metazoa - 371; Fungi - 267; Plants - 113; Viruses - 0; Other Eukaryotes - 4165 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"PSME_00009128-RA","No alias","Pseudotsuga menziesii","(at4g32480 : 143.0) Protein of unknown function (DUF506) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506)  (TAIR:AT2G20670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"PSME_00009312-RA","No alias","Pseudotsuga menziesii","(at5g58270 : 342.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily.  Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 179.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"PSME_00009560-RA","No alias","Pseudotsuga menziesii","(at1g66430 : 453.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (q944f5|scrk2_orysa : 379.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"PSME_00009651-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009709-RA","No alias","Pseudotsuga menziesii","(at1g30220 : 460.0) Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin  (PSI) domains from animal type I receptors.; inositol transporter 2 (INT2); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 52249 Blast hits to 41863 proteins in 2438 species: Archae - 698; Bacteria - 26108; Metazoa - 7164; Fungi - 11733; Plants - 4458; Viruses - 2; Other Eukaryotes - 2086 (source: NCBI BLink). & (q41144|stc_ricco : 105.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 920.0) &  (original description: no original description)","protein_coding"
"PSME_00009945-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 422.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 415.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00010362-RA","No alias","Pseudotsuga menziesii","(q9awa5|gwd1_soltu : 1251.0) Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (EC 2.7.13.3) (Starch-related R1 protein) - Solanum tuberosum (Potato) & (at1g10760 : 1217.0) Encodes an &#945;-glucan, water dikinase required for starch degradation. Involved  in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.; STARCH EXCESS 1 (SEX1); FUNCTIONS IN: protein binding, alpha-glucan, water dikinase activity; INVOLVED IN: cold acclimation, response to symbiotic fungus, response to trehalose stimulus, circadian rhythm, starch catabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: phosphoglucan, water dikinase (TAIR:AT4G24450.1); Has 2623 Blast hits to 2596 proteins in 1116 species: Archae - 196; Bacteria - 1989; Metazoa - 24; Fungi - 8; Plants - 221; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 2434.0) &  (original description: no original description)","protein_coding"
"PSME_00010421-RA","No alias","Pseudotsuga menziesii","(at1g04700 : 219.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00010477-RA","No alias","Pseudotsuga menziesii","(at5g62220 : 472.0) glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q8h038|katam_orysa : 328.0) Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice) & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"PSME_00010508-RA","No alias","Pseudotsuga menziesii","(at3g19970 : 168.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18245.1); Has 401 Blast hits to 400 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 77; Plants - 116; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00010554-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 94.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g15500 : 91.7) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"PSME_00010581-RA","No alias","Pseudotsuga menziesii","(at1g06900 : 640.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT2G41790.1); Has 36039 Blast hits to 19499 proteins in 2240 species: Archae - 83; Bacteria - 7236; Metazoa - 10750; Fungi - 4343; Plants - 1987; Viruses - 664; Other Eukaryotes - 10976 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00010640-RA","No alias","Pseudotsuga menziesii","(at5g03160 : 113.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"PSME_00010821-RA","No alias","Pseudotsuga menziesii","(at5g17540 : 359.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 199.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 718.0) &  (original description: no original description)","protein_coding"
"PSME_00011077-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 118.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 110.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"PSME_00011231-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 239.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"PSME_00011289-RA","No alias","Pseudotsuga menziesii","(o82035|cadh2_picab : 283.0) Cinnamyl alcohol dehydrogenase 2 (EC 1.1.1.195) (CAD 2) - Picea abies (Norway spruce) (Picea excelsa) & (at4g37980 : 263.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"PSME_00011322-RA","No alias","Pseudotsuga menziesii","(at2g30600 : 134.0) BTB/POZ domain-containing protein; INVOLVED IN: cell adhesion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coagulation factor 5/8 type, C-terminal (InterPro:IPR000421), Farnesoic acid 0-methyl transferase (InterPro:IPR022041), BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G21780.2). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00011415-RA","No alias","Pseudotsuga menziesii","(p55232|glgs_betvu : 377.0) Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Beta vulgaris (Su & (at5g48300 : 372.0) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.; ADP glucose pyrophosphorylase  1 (ADG1); FUNCTIONS IN: glucose-1-phosphate adenylyltransferase activity; INVOLVED IN: photoperiodism, flowering, starch biosynthetic process; LOCATED IN: heterotetrameric ADPG pyrophosphorylase complex, apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP glucose pyrophosphorylase large subunit 1 (TAIR:AT5G19220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"PSME_00011495-RA","No alias","Pseudotsuga menziesii","(at1g33290 : 443.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 745 Blast hits to 453 proteins in 163 species: Archae - 0; Bacteria - 369; Metazoa - 12; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 886.0) &  (original description: no original description)","protein_coding"
"PSME_00011516-RA","No alias","Pseudotsuga menziesii","(at5g22020 : 536.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase-like 3 (TAIR:AT1G08470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p18417|stsy_catro : 168.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1072.0) &  (original description: no original description)","protein_coding"
"PSME_00011670-RA","No alias","Pseudotsuga menziesii","(at5g35200 : 555.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"PSME_00011795-RA","No alias","Pseudotsuga menziesii","(at5g48460 : 88.6) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"PSME_00011985-RA","No alias","Pseudotsuga menziesii","(p27608|arof_tobac : 276.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 271.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"PSME_00011991-RA","No alias","Pseudotsuga menziesii","(o81221|act_goshi : 743.0) Actin - Gossypium hirsutum (Upland cotton) & (at3g12110 : 737.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (reliability: 1474.0) &  (original description: no original description)","protein_coding"
"PSME_00012334-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012476-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 361.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 346.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"PSME_00012518-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012533-RA","No alias","Pseudotsuga menziesii","(at3g57490 : 398.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, intracellular, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 8574 Blast hits to 8565 proteins in 2893 species: Archae - 263; Bacteria - 5125; Metazoa - 697; Fungi - 227; Plants - 154; Viruses - 0; Other Eukaryotes - 2108 (source: NCBI BLink). & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"PSME_00012565-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 1117.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 1108.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2234.0) &  (original description: no original description)","protein_coding"
"PSME_00012578-RA","No alias","Pseudotsuga menziesii","(at3g29200 : 321.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"PSME_00012685-RA","No alias","Pseudotsuga menziesii","(at1g20620 : 743.0) Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.; catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o48560|cata3_soybn : 740.0) Catalase-3 (EC 1.11.1.6) - Glycine max (Soybean) & (reliability: 1486.0) &  (original description: no original description)","protein_coding"
"PSME_00012769-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 367.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"PSME_00012821-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012835-RA","No alias","Pseudotsuga menziesii","(q7xiv8|hak9_orysa : 157.0) Probable potassium transporter 9 (OsHAK9) - Oryza sativa (Rice) & (at5g14880 : 146.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 6 (TAIR:AT1G70300.1); Has 3431 Blast hits to 3392 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 104; Plants - 790; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00013059-RA","No alias","Pseudotsuga menziesii","(at1g63770 : 1197.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (reliability: 2394.0) &  (original description: no original description)","protein_coding"
"PSME_00013079-RA","No alias","Pseudotsuga menziesii","(at3g18370 : 509.0) ATSYTF; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 3360; Fungi - 437; Plants - 1305; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 1018.0) &  (original description: no original description)","protein_coding"
"PSME_00013224-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00013292-RA","No alias","Pseudotsuga menziesii","(at3g47570 : 186.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 126.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00013300-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00013377-RA","No alias","Pseudotsuga menziesii","(at2g13600 : 191.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (o24381|tlc1_soltu : 81.6) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00013462-RA","No alias","Pseudotsuga menziesii","(at2g04160 : 530.0) isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.; AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to auxin stimulus, lateral root morphogenesis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G59810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00013538-RA","No alias","Pseudotsuga menziesii","(at1g44170 : 210.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00013554-RA","No alias","Pseudotsuga menziesii","(at2g40840 : 1137.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity.   It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins.  On the other hand, arabinose and fructose were not efficiently used.  Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of &#946;-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 110.0) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 2274.0) &  (original description: no original description)","protein_coding"
"PSME_00013602-RA","No alias","Pseudotsuga menziesii","(at5g05270 : 221.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00013615-RA","No alias","Pseudotsuga menziesii","(at1g36050 : 336.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"PSME_00013628-RA","No alias","Pseudotsuga menziesii","(at2g34840 : 233.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: COPI vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT1G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00013824-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 343.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 331.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"PSME_00013843-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 192.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 177.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00013905-RA","No alias","Pseudotsuga menziesii","(at2g23350 : 256.0) polyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed.; poly(A) binding protein 4 (PAB4); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 520413 Blast hits to 486687 proteins in 21592 species: Archae - 10501; Bacteria - 294432; Metazoa - 110769; Fungi - 17969; Plants - 36260; Viruses - 34479; Other Eukaryotes - 16003 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00013969-RA","No alias","Pseudotsuga menziesii","(at1g13690 : 172.0) AtE1 - stimulates the ATPase activity of DnaK/DnaJ; ATPase E1 (ATE1); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 14554 Blast hits to 12500 proteins in 724 species: Archae - 8; Bacteria - 1323; Metazoa - 7103; Fungi - 1824; Plants - 2936; Viruses - 0; Other Eukaryotes - 1360 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00014008-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00014119-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 521.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 506.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"PSME_00014120-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 295.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 278.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00014149-RA","No alias","Pseudotsuga menziesii","(at5g15740 : 266.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G02250.1); Has 822 Blast hits to 815 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00014271-RA","No alias","Pseudotsuga menziesii","(at3g16830 : 135.0) TOPLESS-related 2 (TPR2); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 3 (TAIR:AT5G27030.1); Has 13436 Blast hits to 8919 proteins in 512 species: Archae - 16; Bacteria - 3246; Metazoa - 4126; Fungi - 2976; Plants - 1389; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00014651-RA","No alias","Pseudotsuga menziesii","(at5g47120 : 120.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1.  Functions as an attenuator of biotic and abiotic types of cell death.  Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9mbd8|bi1_orysa : 117.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00014757-RA","No alias","Pseudotsuga menziesii","(at1g66170 : 397.0) encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to the nucleus.; MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00015076-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00015258-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00015338-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 114.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00015484-RA","No alias","Pseudotsuga menziesii","(at5g51460 : 93.2) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; ATTPPA; FUNCTIONS IN: trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G22590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"PSME_00015581-RA","No alias","Pseudotsuga menziesii","(at5g47790 : 129.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein  (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q50ex6|odo1_pethy : 83.2) ODORANT1 protein (MYB-like protein ODO1) - Petunia hybrida (Petunia) & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00015692-RA","No alias","Pseudotsuga menziesii","(at3g05840 : 106.0) encodes a SHAGGY-like kinase involved in meristem organization.; ATSK12; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, gynoecium development, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 106116 Blast hits to 104748 proteins in 3681 species: Archae - 81; Bacteria - 10864; Metazoa - 38225; Fungi - 11828; Plants - 26475; Viruses - 386; Other Eukaryotes - 18257 (source: NCBI BLink). & (p51137|msk1_medsa : 105.0) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"PSME_00015720-RA","No alias","Pseudotsuga menziesii","(at2g45740 : 155.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11D (PEX11D); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome fission, peroxisome organization; LOCATED IN: peroxisomal membrane, chloroplast, peroxisome, integral to peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11E (TAIR:AT3G61070.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00015776-RA","No alias","Pseudotsuga menziesii",""(at2g45570 : 395.0) member of CYP76C; ""cytochrome P450, family 76, subfamily C, polypeptide 2"" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p48418|c75a1_pethy : 379.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 788.0) &  (original description: no original description)"","protein_coding"
"PSME_00015882-RA","No alias","Pseudotsuga menziesii","(at1g68920 : 95.9) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 191.8) &  (original description: no original description)","protein_coding"
"PSME_00015945-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 523.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 345.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1046.0) &  (original description: no original description)","protein_coding"
"PSME_00016074-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00016841-RA","No alias","Pseudotsuga menziesii","(at2g29200 : 194.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00016911-RA","No alias","Pseudotsuga menziesii","(q40345|idhp_medsa : 770.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (at1g65930 : 739.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (reliability: 1478.0) &  (original description: no original description)","protein_coding"
"PSME_00017269-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 508.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 499.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"PSME_00017292-RA","No alias","Pseudotsuga menziesii","(at1g53000 : 358.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"PSME_00017503-RA","No alias","Pseudotsuga menziesii","(p48599|if4e1_orysa : 198.0) Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit) - Oryza sativa (Rice) & (at4g18040 : 188.0) eIF4E protein.  The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.; eukaryotic translation initiation factor 4E (EIF4E); CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: Eukaryotic initiation factor 4E protein (TAIR:AT1G29550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00017936-RA","No alias","Pseudotsuga menziesii","(at3g13930 : 583.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"PSME_00018071-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018153-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 333.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 320.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00018272-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018295-RA","No alias","Pseudotsuga menziesii","(at4g02570 : 120.0) Encodes a cullin that is a component of  SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl.  Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00018346-RA","No alias","Pseudotsuga menziesii","(at5g44190 : 135.0) Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner.  GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.; GOLDEN2-like 2 (GLK2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 1672 Blast hits to 1670 proteins in 70 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 1623; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00018353-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 441.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 429.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"PSME_00018615-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 107.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 102.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"PSME_00018903-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 198.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00019107-RA","No alias","Pseudotsuga menziesii","(at5g05170 : 1626.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis.  As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3252.0) &  (original description: no original description)","protein_coding"
"PSME_00019286-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 106.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of  the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00019358-RA","No alias","Pseudotsuga menziesii","(at1g13280 : 211.0) Encodes allene oxide cyclase.  One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway.; allene oxide cyclase 4 (AOC4); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 3 (TAIR:AT3G25780.1); Has 204 Blast hits to 204 proteins in 33 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"PSME_00019502-RA","No alias","Pseudotsuga menziesii","(at3g53570 : 271.0) a  member of a CDC2-related kinase subfamily,  the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p51137|msk1_medsa : 85.5) Glycogen synthase kinase-3 homolog MsK-1 (EC 2.7.11.1) - Medicago sativa (Alfalfa) & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"PSME_00019509-RA","No alias","Pseudotsuga menziesii","(at3g46980 : 451.0) Encodes an inorganic phosphate transporter (PHT4;3).; phosphate transporter 4;3 (PHT4;3); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;2 (TAIR:AT2G38060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00019631-RA","No alias","Pseudotsuga menziesii","(at3g17630 : 265.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00019723-RA","No alias","Pseudotsuga menziesii","(at5g16750 : 198.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00019895-RA","No alias","Pseudotsuga menziesii","(at1g53240 : 492.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 488.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (reliability: 984.0) &  (original description: no original description)","protein_coding"
"PSME_00019910-RA","No alias","Pseudotsuga menziesii","(at3g12270 : 511.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"PSME_00020009-RA","No alias","Pseudotsuga menziesii","(at1g68920 : 136.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00020114-RA","No alias","Pseudotsuga menziesii","(p35694|bru1_soybn : 201.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (at4g25810 : 199.0) xyloglucan endotransglycosylase-related protein (XTR6); xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: Xyloglucan endotransglucosylase/hydrolase family protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235 proteins in 316 species: Archae - 0; Bacteria - 302; Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00020274-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 345.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 335.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00020402-RA","No alias","Pseudotsuga menziesii","(q8gu86|pdr5_orysa : 165.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (at1g15210 : 163.0) pleiotropic drug resistance 7 (PDR7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT1G59870.1); Has 383488 Blast hits to 290790 proteins in 4017 species: Archae - 7218; Bacteria - 309544; Metazoa - 9443; Fungi - 7090; Plants - 6323; Viruses - 4; Other Eukaryotes - 43866 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"PSME_00020471-RA","No alias","Pseudotsuga menziesii","(q9m3v8|rs6_aspof : 393.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (at5g10360 : 381.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00020475-RA","No alias","Pseudotsuga menziesii","(q6vva6|hak1_orysa : 281.0) Potassium transporter 1 (OsHAK1) - Oryza sativa (Rice) & (at4g13420 : 278.0) Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.; high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00020645-RA","No alias","Pseudotsuga menziesii","(at3g55000 : 211.0) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.; TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"PSME_00020717-RA","No alias","Pseudotsuga menziesii","(p80471|lipc_soltu : 199.0) Light-induced protein, chloroplast precursor (Chloroplastic drought-induced stress protein CDSP-34) - Solanum tuberosum (Potato) & (at4g04020 : 191.0) Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.; fibrillin (FIB); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photoinhibition, response to cold, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 435 Blast hits to 434 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00020948-RA","No alias","Pseudotsuga menziesii","(at1g47510 : 179.0) Encodes a phosphatidylinositol  polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA.; inositol polyphosphate 5-phosphatase 11 (5PTASE11); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G65580.1). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00021119-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 577.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"PSME_00021305-RA","No alias","Pseudotsuga menziesii","(at2g41740 : 301.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"PSME_00021353-RA","No alias","Pseudotsuga menziesii","(at5g18280 : 494.0) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.; apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1418 Blast hits to 1409 proteins in 220 species: Archae - 0; Bacteria - 33; Metazoa - 602; Fungi - 297; Plants - 360; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (p52914|ntpa_pea : 386.0) Nucleoside-triphosphatase (EC 3.6.1.15) (Nucleoside triphosphate phosphohydrolase) (NTPase) (Apyrase) - Pisum sativum (Garden pea) & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00021376-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021517-RA","No alias","Pseudotsuga menziesii","(at1g12210 : 150.0) RFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5.; RPS5-like 1 (RFL1); FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, response to bacterium, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, embryo, sepal, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 18050 Blast hits to 15832 proteins in 638 species: Archae - 19; Bacteria - 1098; Metazoa - 2850; Fungi - 219; Plants - 13503; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00021543-RA","No alias","Pseudotsuga menziesii","(p37890|cbp1_orysa : 432.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) & (at4g12910 : 423.0) serine carboxypeptidase-like 20 (scpl20); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1); Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0; Bacteria - 294; Metazoa - 699; Fungi - 932; Plants - 1620; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"PSME_00021666-RA","No alias","Pseudotsuga menziesii","(at5g59850 : 125.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9at34|rs15a_dauca : 122.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00021853-RA","No alias","Pseudotsuga menziesii","(at2g21270 : 256.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00021929-RA","No alias","Pseudotsuga menziesii","(at5g65280 : 329.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00022272-RA","No alias","Pseudotsuga menziesii","(at5g46290 : 738.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 728.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1476.0) &  (original description: no original description)","protein_coding"
"PSME_00022427-RA","No alias","Pseudotsuga menziesii","(p11143|hsp70_maize : 207.0) Heat shock 70 kDa protein - Zea mays (Maize) & (at3g12580 : 206.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00022434-RA","No alias","Pseudotsuga menziesii","(at3g20630 : 495.0) Encodes a ubiquitin-specific protease.  Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage.  Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (reliability: 990.0) &  (original description: no original description)","protein_coding"
"PSME_00022717-RA","No alias","Pseudotsuga menziesii","(at4g25640 : 131.0) Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.; detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"PSME_00022724-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00022802-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 174.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00022833-RA","No alias","Pseudotsuga menziesii","(at5g66680 : 185.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00022860-RA","No alias","Pseudotsuga menziesii","(at5g05310 : 222.0) TLC ATP/ADP transporter; Has 647 Blast hits to 643 proteins in 131 species: Archae - 0; Bacteria - 265; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"PSME_00022902-RA","No alias","Pseudotsuga menziesii","(at1g61870 : 236.0) pentatricopeptide repeat 336 (PPR336); LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G11630.1); Has 31000 Blast hits to 9550 proteins in 270 species: Archae - 4; Bacteria - 23; Metazoa - 297; Fungi - 351; Plants - 29494; Viruses - 0; Other Eukaryotes - 831 (source: NCBI BLink). & (q76c99|rf1_orysa : 121.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"PSME_00023045-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023107-RA","No alias","Pseudotsuga menziesii","(at5g34940 : 97.1) The protein is predicted  (WoLF PSORT program) to be membrane-associated.; glucuronidase 3 (GUS3); FUNCTIONS IN: beta-glucuronidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 340 Blast hits to 334 proteins in 62 species: Archae - 0; Bacteria - 20; Metazoa - 169; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"PSME_00023246-RA","No alias","Pseudotsuga menziesii","(at3g51680 : 356.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 321.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00023400-RA","No alias","Pseudotsuga menziesii","(at3g57000 : 269.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase,  EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"PSME_00024107-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00024109-RA","No alias","Pseudotsuga menziesii","(at4g28390 : 544.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p25083|adt1_soltu : 542.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"PSME_00024226-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00024457-RA","No alias","Pseudotsuga menziesii","(at3g05760 : 220.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, double-stranded RNA binding (InterPro:IPR022755). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00024713-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 133.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00024787-RA","No alias","Pseudotsuga menziesii","(at3g03380 : 203.0) Encodes a putative DegP protease.; DegP protease 7 (DegP7); CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03370.1); Has 8327 Blast hits to 7895 proteins in 2064 species: Archae - 65; Bacteria - 6254; Metazoa - 235; Fungi - 503; Plants - 137; Viruses - 0; Other Eukaryotes - 1133 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00024826-RA","No alias","Pseudotsuga menziesii","(at3g05500 : 168.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 132.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00024922-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 482.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 137.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 904.0) &  (original description: no original description)","protein_coding"
"PSME_00025082-RA","No alias","Pseudotsuga menziesii","(at1g27170 : 80.1) transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"PSME_00025180-RA","No alias","Pseudotsuga menziesii","(at4g38510 : 715.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 710.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"PSME_00025213-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 180.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 176.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"PSME_00025319-RA","No alias","Pseudotsuga menziesii","(at5g41770 : 433.0) crooked neck protein, putative / cell cycle protein, putative; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 5514 Blast hits to 2293 proteins in 250 species: Archae - 19; Bacteria - 57; Metazoa - 1995; Fungi - 1739; Plants - 986; Viruses - 0; Other Eukaryotes - 718 (source: NCBI BLink). & (reliability: 866.0) &  (original description: no original description)","protein_coding"
"PSME_00025492-RA","No alias","Pseudotsuga menziesii","(at1g04830 : 137.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00025562-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 481.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00025604-RA","No alias","Pseudotsuga menziesii","(at4g20130 : 309.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"PSME_00025841-RA","No alias","Pseudotsuga menziesii","(at5g54390 : 399.0) Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+.  It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do.  It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.; HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40639|dpnp_orysa : 224.0) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) - Oryza sativa (Rice) & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"PSME_00025850-RA","No alias","Pseudotsuga menziesii","(at5g16150 : 552.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41144|stc_ricco : 124.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1104.0) &  (original description: no original description)","protein_coding"
"PSME_00025857-RA","No alias","Pseudotsuga menziesii","(at4g19050 : 110.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G45510.2); Has 34356 Blast hits to 17814 proteins in 759 species: Archae - 28; Bacteria - 2387; Metazoa - 7116; Fungi - 505; Plants - 22424; Viruses - 39; Other Eukaryotes - 1857 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00026114-RA","No alias","Pseudotsuga menziesii","(at5g46150 : 208.0) LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 1 (TAIR:AT3G12740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00026143-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 156.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00026243-RA","No alias","Pseudotsuga menziesii",""(q8gsq1|c85a1_orysa : 115.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (at1g55940 : 102.0) member of CYP708A; ""cytochrome P450, family 708, subfamily A, polypeptide 1"" (CYP708A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, shoot, hypocotyl, root, leaf; EXPRESSED DURING: LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), Cytochrome P450 (InterPro:IPR001128), F-box associated interaction domain (InterPro:IPR017451), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 33156 Blast hits to 33083 proteins in 1720 species: Archae - 63; Bacteria - 6821; Metazoa - 10825; Fungi - 5863; Plants - 8109; Viruses - 6; Other Eukaryotes - 1469 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)"","protein_coding"
"PSME_00026439-RA","No alias","Pseudotsuga menziesii","(at2g44710 : 290.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"PSME_00026489-RA","No alias","Pseudotsuga menziesii","(at3g03740 : 119.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00026555-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00026794-RA","No alias","Pseudotsuga menziesii","(at1g56310 : 275.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"PSME_00027156-RA","No alias","Pseudotsuga menziesii","(at5g53580 : 423.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"PSME_00027175-RA","No alias","Pseudotsuga menziesii","(at4g11820 : 573.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"PSME_00027205-RA","No alias","Pseudotsuga menziesii","(at2g41450 : 129.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00027462-RA","No alias","Pseudotsuga menziesii","(at1g74260 : 582.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1164.0) &  (original description: no original description)","protein_coding"
"PSME_00027501-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00027560-RA","No alias","Pseudotsuga menziesii","(at4g19420 : 299.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"PSME_00027639-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 343.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 203.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"PSME_00027789-RA","No alias","Pseudotsuga menziesii","(at5g08080 : 348.0) member of SYP13 Gene Family; syntaxin of plants 132 (SYP132); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00027938-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 364.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 359.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"PSME_00028063-RA","No alias","Pseudotsuga menziesii","(at5g14270 : 145.0) bromodomain and extraterminal domain protein 9 (BET9); FUNCTIONS IN: DNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 10 (TAIR:AT3G01770.1). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00028319-RA","No alias","Pseudotsuga menziesii","(p37120|c75a2_solme : 319.0) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A2) (CYPLXXVA2) (P-450EG1) - Solanum melongena (Eggplant) (Aubergine) & (at5g07990 : 303.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"PSME_00028334-RA","No alias","Pseudotsuga menziesii","(at1g67900 : 419.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 270.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"PSME_00028398-RA","No alias","Pseudotsuga menziesii","(at5g03300 : 184.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (o49923|adk_phypa : 147.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00028573-RA","No alias","Pseudotsuga menziesii","(at2g44710 : 237.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"PSME_00028604-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 272.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00028677-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 585.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 577.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1170.0) &  (original description: no original description)","protein_coding"
"PSME_00028684-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00028691-RA","No alias","Pseudotsuga menziesii","(q05964|fl3h_diaca : 326.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Dianthus caryophyllus (Carnation) (Clove pink) & (at3g51240 : 308.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00028770-RA","No alias","Pseudotsuga menziesii","(at3g51070 : 283.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G64030.1); Has 136558 Blast hits to 66732 proteins in 2821 species: Archae - 360; Bacteria - 21192; Metazoa - 48559; Fungi - 12924; Plants - 6617; Viruses - 796; Other Eukaryotes - 46110 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"PSME_00028877-RA","No alias","Pseudotsuga menziesii","(at1g04780 : 112.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G24210.1); Has 1138 Blast hits to 827 proteins in 107 species: Archae - 2; Bacteria - 12; Metazoa - 639; Fungi - 18; Plants - 352; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"PSME_00028951-RA","No alias","Pseudotsuga menziesii","(at5g57990 : 150.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 23 (UBP23); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 19 (TAIR:AT2G24640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00029258-RA","No alias","Pseudotsuga menziesii","(at4g26780 : 206.0) unknown function; AR192; FUNCTIONS IN: copper ion binding; INVOLVED IN: protein folding, protein import into mitochondrial matrix; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GrpE nucleotide exchange factor (InterPro:IPR000740), GrpE nucleotide exchange factor, head (InterPro:IPR009012), GrpE nucleotide exchange factor, coiled-coil (InterPro:IPR013805); BEST Arabidopsis thaliana protein match is: Co-chaperone GrpE family protein (TAIR:AT5G55200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00029454-RA","No alias","Pseudotsuga menziesii","(at4g32460 : 342.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"PSME_00029482-RA","No alias","Pseudotsuga menziesii","(at5g40380 : 195.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 133.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00029685-RA","No alias","Pseudotsuga menziesii","(at2g38960 : 199.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 2 (ERO2); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 1 (TAIR:AT1G72280.1). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00029732-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 190.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00029904-RA","No alias","Pseudotsuga menziesii","(at2g22250 : 390.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"PSME_00029905-RA","No alias","Pseudotsuga menziesii","(at2g22250 : 181.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00029949-RA","No alias","Pseudotsuga menziesii","(at5g42190 : 190.0) Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.; E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein; CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: S phase kinase-associated protein 1 (TAIR:AT1G75950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00029970-RA","No alias","Pseudotsuga menziesii","(at4g11050 : 104.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q6l4i2|gun15_orysa : 87.0) Endoglucanase 15 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 15) - Oryza sativa (Rice) & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"PSME_00030002-RA","No alias","Pseudotsuga menziesii","(p27608|arof_tobac : 816.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at4g33510 : 808.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"PSME_00030081-RA","No alias","Pseudotsuga menziesii","(at1g22280 : 97.1) Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C).  PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB.  Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.; phytochrome-associated protein phosphatase type 2C (PAPP2C); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G34750.1). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"PSME_00030179-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 420.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 410.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00030217-RA","No alias","Pseudotsuga menziesii","(at1g52800 : 109.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G52790.1); Has 6299 Blast hits to 6226 proteins in 763 species: Archae - 0; Bacteria - 707; Metazoa - 49; Fungi - 497; Plants - 4377; Viruses - 0; Other Eukaryotes - 669 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00030374-RA","No alias","Pseudotsuga menziesii","(at3g05500 : 102.0) Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q9fra7|y5940_orysa : 92.0) Putative REF/SRPP-like protein Os05g0151300 - Oryza sativa (Rice) & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"PSME_00030571-RA","No alias","Pseudotsuga menziesii","(q6f2y7|hs101_orysa : 608.0) Heat shock protein 101 - Oryza sativa (Rice) & (at1g74310 : 607.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family.  Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101.  AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"PSME_00030668-RA","No alias","Pseudotsuga menziesii","(at3g43920 : 584.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (reliability: 1168.0) &  (original description: no original description)","protein_coding"
"PSME_00030751-RA","No alias","Pseudotsuga menziesii","(at3g10600 : 651.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.; cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 1302.0) &  (original description: no original description)","protein_coding"
"PSME_00031075-RA","No alias","Pseudotsuga menziesii","(at2g32480 : 167.0) Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.; ARABIDOPSIS SERIN PROTEASE (ARASP); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, chloroplast organization; LOCATED IN: chloroplast, plastid, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase M50, putative membrane-associated zinc metallopeptidase (InterPro:IPR004387); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT1G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00031257-RA","No alias","Pseudotsuga menziesii","(at1g18260 : 182.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00031351-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 203.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 194.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00031480-RA","No alias","Pseudotsuga menziesii","(at2g20330 : 799.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 32306 Blast hits to 19564 proteins in 654 species: Archae - 48; Bacteria - 6195; Metazoa - 11628; Fungi - 6530; Plants - 3814; Viruses - 23; Other Eukaryotes - 4068 (source: NCBI BLink). & (reliability: 1598.0) &  (original description: no original description)","protein_coding"
"PSME_00031787-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 572.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 1144.0) &  (original description: no original description)","protein_coding"
"PSME_00032236-RA","No alias","Pseudotsuga menziesii","(at1g59830 : 253.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G10430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 251.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00032459-RA","No alias","Pseudotsuga menziesii","(at5g04920 : 199.0) EAP30/Vps36 family protein; CONTAINS InterPro DOMAIN/s: EAP30 (InterPro:IPR007286), Vacuolar protein sorting protein, Vps36 (InterPro:IPR021648); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00032562-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00032840-RA","No alias","Pseudotsuga menziesii","(at5g15750 : 163.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"PSME_00032880-RA","No alias","Pseudotsuga menziesii","(at3g53120 : 92.8) VPS37-1; CONTAINS InterPro DOMAIN/s: Modifier of rudimentary, Modr (InterPro:IPR009851); BEST Arabidopsis thaliana protein match is: Modifier of rudimentary (Mod(r)) protein (TAIR:AT2G36680.1); Has 448 Blast hits to 448 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 285; Fungi - 19; Plants - 79; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00032983-RA","No alias","Pseudotsuga menziesii","(at5g51980 : 219.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: zinc finger WD40 repeat protein 1 (TAIR:AT4G25440.1); Has 29113 Blast hits to 15916 proteins in 570 species: Archae - 36; Bacteria - 4384; Metazoa - 10765; Fungi - 6879; Plants - 3369; Viruses - 0; Other Eukaryotes - 3680 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00033029-RA","No alias","Pseudotsuga menziesii","(at1g04700 : 197.0) PB1 domain-containing protein tyrosine kinase; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT3G24715.1); Has 117644 Blast hits to 116217 proteins in 4946 species: Archae - 115; Bacteria - 12372; Metazoa - 45570; Fungi - 9947; Plants - 31841; Viruses - 450; Other Eukaryotes - 17349 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00033117-RA","No alias","Pseudotsuga menziesii","(at1g11900 : 191.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G06920.1); Has 30383 Blast hits to 10536 proteins in 259 species: Archae - 3; Bacteria - 11; Metazoa - 189; Fungi - 334; Plants - 28802; Viruses - 0; Other Eukaryotes - 1044 (source: NCBI BLink). & (q76c99|rf1_orysa : 97.1) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00033242-RA","No alias","Pseudotsuga menziesii","(at3g27330 : 157.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 665; Viruses - 17; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00033344-RA","No alias","Pseudotsuga menziesii","(at5g25760 : 124.0) mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin4 (PEX4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10357 Blast hits to 10353 proteins in 397 species: Archae - 0; Bacteria - 2; Metazoa - 4640; Fungi - 2157; Plants - 1900; Viruses - 24; Other Eukaryotes - 1634 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00033543-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033547-RA","No alias","Pseudotsuga menziesii","(q43237|camt_vitvi : 177.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCOAMT) (CCOAOMT) - Vitis vinifera (Grape) & (at4g34050 : 174.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00033677-RA","No alias","Pseudotsuga menziesii","(at5g62790 : 323.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis  DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (q8w250|dxr_orysa : 322.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00033742-RA","No alias","Pseudotsuga menziesii","(at3g26100 : 413.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 826.0) &  (original description: no original description)","protein_coding"
"PSME_00033797-RA","No alias","Pseudotsuga menziesii","(at3g24495 : 209.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (q9xgc9|msh2_maize : 113.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00033903-RA","No alias","Pseudotsuga menziesii","(at1g07890 : 356.0) Encodes a cytosolic ascorbate peroxidase APX1.  Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells.  Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p48534|apx1_pea : 356.0) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP) (PsAPx01) - Pisum sativum (Garden pea) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00033961-RA","No alias","Pseudotsuga menziesii","(at5g21960 : 122.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G19210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 86.7) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00034068-RA","No alias","Pseudotsuga menziesii","(at4g10770 : 135.0) oligopeptide transporter; oligopeptide transporter 7 (OPT7); CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 1 (TAIR:AT4G27730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00034254-RA","No alias","Pseudotsuga menziesii","(q10710|sta_ricco : 179.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (at4g02050 : 177.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00034331-RA","No alias","Pseudotsuga menziesii","(at5g64270 : 471.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00034408-RA","No alias","Pseudotsuga menziesii","(at3g03790 : 243.0) ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1). & (q943f3|rl18a_orysa : 119.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00034461-RA","No alias","Pseudotsuga menziesii","(at4g29900 : 433.0) one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.; autoinhibited Ca(2+)-ATPase 10 (ACA10); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: shoot development, inflorescence morphogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 46568 Blast hits to 34154 proteins in 3167 species: Archae - 903; Bacteria - 32081; Metazoa - 4140; Fungi - 2685; Plants - 2119; Viruses - 3; Other Eukaryotes - 4637 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 312.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 866.0) &  (original description: no original description)","protein_coding"
"PSME_00034498-RA","No alias","Pseudotsuga menziesii","(o82035|cadh2_picab : 325.0) Cinnamyl alcohol dehydrogenase 2 (EC 1.1.1.195) (CAD 2) - Picea abies (Norway spruce) (Picea excelsa) & (at4g37980 : 298.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (reliability: 596.0) &  (original description: no original description)","protein_coding"
"PSME_00034807-RA","No alias","Pseudotsuga menziesii","(at4g27060 : 532.0) Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth.  The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.; TORTIFOLIA 1 (TOR1); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G50890.1); Has 232 Blast hits to 225 proteins in 36 species: Archae - 2; Bacteria - 8; Metazoa - 6; Fungi - 6; Plants - 191; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"PSME_00034871-RA","No alias","Pseudotsuga menziesii","(at3g47340 : 146.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and  is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p49092|asns1_lotja : 139.0) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) - Lotus japonicus & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00034982-RA","No alias","Pseudotsuga menziesii","(at2g30740 : 343.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G06700.2); Has 113668 Blast hits to 112534 proteins in 4506 species: Archae - 103; Bacteria - 13481; Metazoa - 42069; Fungi - 9253; Plants - 32237; Viruses - 339; Other Eukaryotes - 16186 (source: NCBI BLink). & (o24585|cri4_maize : 146.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"PSME_00035043-RA","No alias","Pseudotsuga menziesii","(at5g10160 : 282.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00035079-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 162.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 155.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00035154-RA","No alias","Pseudotsuga menziesii","(at4g23180 : 372.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8l4h4|nork_medtr : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"PSME_00035333-RA","No alias","Pseudotsuga menziesii","(at5g17770 : 387.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p16081|nia1_orysa : 171.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00035347-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035370-RA","No alias","Pseudotsuga menziesii","(p52579|ifrh_tobac : 301.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at1g75290 : 293.0) encodes a protein whose sequence is similar to an isoflavone reductase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00035387-RA","No alias","Pseudotsuga menziesii","(at2g25760 : 614.0) Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1228.0) &  (original description: no original description)","protein_coding"
"PSME_00035390-RA","No alias","Pseudotsuga menziesii","(at3g02520 : 87.4) Encodes GF14 &#957;, a 14-3-3 protein isoform (14-3-3&#957;).; general regulatory factor 7 (GRF7); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: nuclear envelope, chloroplast stroma, plasma membrane, chloroplast, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 3 (TAIR:AT5G38480.1); Has 2692 Blast hits to 2682 proteins in 382 species: Archae - 0; Bacteria - 0; Metazoa - 1258; Fungi - 312; Plants - 765; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (o49997|1433e_tobac : 87.4) 14-3-3-like protein E - Nicotiana tabacum (Common tobacco) & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"PSME_00035886-RA","No alias","Pseudotsuga menziesii","(p17801|kpro_maize : 99.8) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (at1g78830 : 80.1) Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: apoplast, cell wall, plasma membrane, plant-type cell wall; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78820.1); Has 2662 Blast hits to 2603 proteins in 85 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 2651; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"PSME_00035922-RA","No alias","Pseudotsuga menziesii","(at1g30825 : 405.0) Involved in trichome maturation. mutant displays enlarged trichomes; DISTORTED TRICHOMES 2 (DIS2); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: actin-related protein C2B (TAIR:AT2G33385.2); Has 407 Blast hits to 407 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 133; Plants - 82; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00035948-RA","No alias","Pseudotsuga menziesii","(at3g21420 : 135.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (p31237|acco_actch : 102.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00036061-RA","No alias","Pseudotsuga menziesii","(at1g80160 : 214.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"PSME_00036170-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00036277-RA","No alias","Pseudotsuga menziesii","(at1g51160 : 235.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G02280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00036298-RA","No alias","Pseudotsuga menziesii","(at4g03210 : 280.0) encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.; xyloglucan endotransglucosylase/hydrolase 9 (XTH9); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 5 (TAIR:AT5G13870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41638|xtha_phaan : 275.0) Xyloglucan endotransglucosylase/hydrolase protein A precursor (EC 2.4.1.207) (VaXTH1) - Phaseolus angularis (Adzuki bean) (Vigna angularis) & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"PSME_00036376-RA","No alias","Pseudotsuga menziesii","(at4g33070 : 347.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink). & (p51847|pdc1_orysa : 345.0) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"PSME_00036457-RA","No alias","Pseudotsuga menziesii","(at5g11880 : 526.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT3G14390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"PSME_00036473-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00036535-RA","No alias","Pseudotsuga menziesii","(at3g07050 : 167.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00036591-RA","No alias","Pseudotsuga menziesii","(at1g22170 : 431.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"PSME_00037017-RA","No alias","Pseudotsuga menziesii","(at3g15380 : 441.0) Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); Has 948 Blast hits to 937 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 120; Plants - 118; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink). & (reliability: 882.0) &  (original description: no original description)","protein_coding"
"PSME_00037135-RA","No alias","Pseudotsuga menziesii","(at4g02750 : 105.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"PSME_00037336-RA","No alias","Pseudotsuga menziesii","(at5g07740 : 86.3) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"PSME_00037385-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00037591-RA","No alias","Pseudotsuga menziesii","(at1g05675 : 357.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1). & (q41819|iaag_maize : 300.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"PSME_00037696-RA","No alias","Pseudotsuga menziesii","(at3g52200 : 85.1) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00037697-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00038607-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 334.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 323.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"PSME_00038657-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 262.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 261.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00038760-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00038854-RA","No alias","Pseudotsuga menziesii","(at5g20190 : 119.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00038906-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 200.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 192.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00039011-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039145-RA","No alias","Pseudotsuga menziesii","(at4g33300 : 119.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00039258-RA","No alias","Pseudotsuga menziesii","(at4g38400 : 277.0) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin-like A2 (EXLA2); INVOLVED IN: response to cyclopentenone, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin-like A1 (TAIR:AT3G45970.1); Has 1877 Blast hits to 1874 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1869; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (q10s70|exla1_orysa : 249.0) Expansin-like A1 precursor (OsEXLA1) (OsEXPL1) (OsaEXPb2.1) - Oryza sativa (Rice) & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"PSME_00039462-RA","No alias","Pseudotsuga menziesii","(at1g52880 : 282.0) Transcription factor with a NAC domain.  Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.; NO APICAL MERISTEM (NAM); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein  2 (TAIR:AT3G15510.1); Has 3040 Blast hits to 3032 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3034; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q52qh4|nac68_orysa : 235.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00039676-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039735-RA","No alias","Pseudotsuga menziesii","(at2g20750 : 156.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (q7x6j9|exb17_orysa : 148.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00039780-RA","No alias","Pseudotsuga menziesii","(at3g19000 : 293.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06942|fl3h_maldo : 141.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00040218-RA","No alias","Pseudotsuga menziesii","(at1g59990 : 318.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"PSME_00040419-RA","No alias","Pseudotsuga menziesii","(at4g02750 : 173.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00040480-RA","No alias","Pseudotsuga menziesii","(o64937|ef1a_orysa : 334.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (at5g60390 : 331.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00040514-RA","No alias","Pseudotsuga menziesii","(at2g30020 : 329.0) Encodes AP2C1.  Belongs to the clade B of the PP2C-superfamily.  Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00040519-RA","No alias","Pseudotsuga menziesii","(at4g21120 : 705.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 1410.0) &  (original description: no original description)","protein_coding"
"PSME_00040607-RA","No alias","Pseudotsuga menziesii","(at2g30020 : 331.0) Encodes AP2C1.  Belongs to the clade B of the PP2C-superfamily.  Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.; Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00040627-RA","No alias","Pseudotsuga menziesii","(at5g67480 : 198.0) BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.; BTB and TAZ domain protein 4 (BT4); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: response to auxin stimulus, response to gibberellin stimulus; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 5 (TAIR:AT4G37610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00040737-RA","No alias","Pseudotsuga menziesii","(at5g57610 : 288.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00041098-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 82.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"PSME_00041206-RA","No alias","Pseudotsuga menziesii","(at1g80820 : 401.0) Encodes an cinnamoyl CoA reductase isoform.  Involved in lignin biosynthesis.; cinnamoyl coa reductase (CCR2); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase 1 (TAIR:AT1G15950.1); Has 10779 Blast hits to 10766 proteins in 1817 species: Archae - 140; Bacteria - 4512; Metazoa - 410; Fungi - 946; Plants - 2512; Viruses - 14; Other Eukaryotes - 2245 (source: NCBI BLink). & (p51108|dfra_maize : 197.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 802.0) &  (original description: no original description)","protein_coding"
"PSME_00041282-RA","No alias","Pseudotsuga menziesii","(at5g03760 : 497.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 994.0) &  (original description: no original description)","protein_coding"
"PSME_00041452-RA","No alias","Pseudotsuga menziesii","(at1g44350 : 190.0) encodes a protein similar to IAA amino acid conjugate hydrolase.; IAA-leucine resistant (ILR)-like gene 6 (ILL6); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 12322 Blast hits to 12314 proteins in 1908 species: Archae - 129; Bacteria - 9070; Metazoa - 89; Fungi - 234; Plants - 310; Viruses - 0; Other Eukaryotes - 2490 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00041505-RA","No alias","Pseudotsuga menziesii","(at2g16990 : 146.0) Major facilitator superfamily protein; FUNCTIONS IN: tetracycline transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00041518-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041591-RA","No alias","Pseudotsuga menziesii","(p26413|hsp70_soybn : 488.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at3g12580 : 480.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (reliability: 960.0) &  (original description: no original description)","protein_coding"
"PSME_00041635-RA","No alias","Pseudotsuga menziesii","(at1g76540 : 189.0) Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle.  Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling.; cyclin-dependent kinase B2;1 (CDKB2;1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;2 (TAIR:AT1G20930.1); Has 111951 Blast hits to 110345 proteins in 2908 species: Archae - 97; Bacteria - 11880; Metazoa - 41997; Fungi - 12251; Plants - 25980; Viruses - 445; Other Eukaryotes - 19301 (source: NCBI BLink). & (q38775|cdc2d_antma : 181.0) Cell division control protein 2 homolog D (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00041853-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 325.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 316.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00042090-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 206.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 201.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00042091-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 102.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g15500 : 100.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00042142-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042203-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 381.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00042392-RA","No alias","Pseudotsuga menziesii","(at5g27550 : 113.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: Di-glucose binding protein with Kinesin motor domain (TAIR:AT2G22610.2); Has 10360 Blast hits to 10027 proteins in 304 species: Archae - 0; Bacteria - 2; Metazoa - 4607; Fungi - 1315; Plants - 1897; Viruses - 0; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"PSME_00042717-RA","No alias","Pseudotsuga menziesii","(at1g77090 : 122.0) Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein (TAIR:AT3G56650.1); Has 207 Blast hits to 207 proteins in 35 species: Archae - 0; Bacteria - 22; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00042761-RA","No alias","Pseudotsuga menziesii","(at5g16780 : 276.0) Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes.; DEFECTIVELY ORGANIZED TRIBUTARIES  2 (DOT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT3G14700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"PSME_00042978-RA","No alias","Pseudotsuga menziesii","(at5g61500 : 187.0) ATG3; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 3 (InterPro:IPR007135), Autophagy-related protein 3, C-terminal (InterPro:IPR019461), Autophagy-related protein 3, N-terminal (InterPro:IPR007134); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00043087-RA","No alias","Pseudotsuga menziesii","(at1g79530 : 232.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (q39769|g3pc_ginbi : 206.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Ginkgo biloba (Ginkgo) & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00043183-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043581-RA","No alias","Pseudotsuga menziesii","(at5g33370 : 369.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: Li-tolerant lipase 1 (TAIR:AT3G04290.1); Has 2955 Blast hits to 2928 proteins in 93 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 2884; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p40603|apg_brana : 155.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"PSME_00043595-RA","No alias","Pseudotsuga menziesii","(at1g11380 : 81.3) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G05350.1); Has 314 Blast hits to 313 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 8; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"PSME_00043788-RA","No alias","Pseudotsuga menziesii","(at5g06600 : 207.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00043824-RA","No alias","Pseudotsuga menziesii","(p41643|psbc_pinth : 98.6) Photosystem II 44 kDa reaction center protein (P6 protein) (CP43) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00270 : 90.9) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00043861-RA","No alias","Pseudotsuga menziesii","(o65001|te1_maize : 165.0) Protein terminal ear1 - Zea mays (Maize) & (at3g26120 : 147.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00043997-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 732.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 719.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1460.0) &  (original description: no original description)","protein_coding"
"PSME_00044318-RA","No alias","Pseudotsuga menziesii","(at1g63120 : 172.0) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.; RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00044981-RA","No alias","Pseudotsuga menziesii","(at2g21620 : 102.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"PSME_00045422-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 180.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g80300 : 174.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"PSME_00045694-RA","No alias","Pseudotsuga menziesii","(at1g77420 : 224.0) alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G16120.1); Has 4552 Blast hits to 4550 proteins in 1360 species: Archae - 49; Bacteria - 3106; Metazoa - 121; Fungi - 218; Plants - 474; Viruses - 41; Other Eukaryotes - 543 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"PSME_00045835-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00045877-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 180.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"PSME_00045923-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046046-RA","No alias","Pseudotsuga menziesii","(at1g07900 : 117.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"PSME_00046196-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 732.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 723.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1464.0) &  (original description: no original description)","protein_coding"
"PSME_00046314-RA","No alias","Pseudotsuga menziesii","(at1g48350 : 112.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (q8say0|rk18_orysa : 90.1) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"PSME_00046337-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046384-RA","No alias","Pseudotsuga menziesii","(at1g53650 : 93.6) RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins.; CTC-interacting domain 8 (CID8); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 9 (TAIR:AT3G14450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00046654-RA","No alias","Pseudotsuga menziesii","(at1g05675 : 341.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: Uridine diphosphate glycosyltransferase 74E2 (TAIR:AT1G05680.1). & (q41819|iaag_maize : 291.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00046660-RA","No alias","Pseudotsuga menziesii","(at3g24495 : 343.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (q9xgc9|msh2_maize : 108.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"PSME_00046830-RA","No alias","Pseudotsuga menziesii","(at3g28345 : 1028.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1025.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2056.0) &  (original description: no original description)","protein_coding"
"PSME_00047017-RA","No alias","Pseudotsuga menziesii","(at1g14590 : 304.0) Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"PSME_00047185-RA","No alias","Pseudotsuga menziesii","(at1g22380 : 397.0) Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.; UDP-glucosyl transferase 85A3 (UGT85A3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G22400.1); Has 7656 Blast hits to 7558 proteins in 363 species: Archae - 0; Bacteria - 87; Metazoa - 2193; Fungi - 26; Plants - 5186; Viruses - 99; Other Eukaryotes - 65 (source: NCBI BLink). & (q41819|iaag_maize : 192.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 788.0) &  (original description: no original description)","protein_coding"
"PSME_00047418-RA","No alias","Pseudotsuga menziesii","(at3g47690 : 153.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; microtubule end binding protein EB1A (EB1A); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: end binding protein 1B (TAIR:AT5G62500.1); Has 937 Blast hits to 898 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 142; Plants - 110; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00047563-RA","No alias","Pseudotsuga menziesii","(at2g30070 : 110.0) Encodes a high affinity potassium transporter.; potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q652j4|hak13_orysa : 110.0) Probable potassium transporter 13 (OsHAK13) - Oryza sativa (Rice) & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00047679-RA","No alias","Pseudotsuga menziesii","(at2g03380 : 348.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46134 Blast hits to 13811 proteins in 252 species: Archae - 0; Bacteria - 9; Metazoa - 175; Fungi - 164; Plants - 45093; Viruses - 0; Other Eukaryotes - 693 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00047829-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 178.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 87.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"PSME_00047840-RA","No alias","Pseudotsuga menziesii","(at3g08505 : 270.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"PSME_00048228-RA","No alias","Pseudotsuga menziesii","(p52579|ifrh_tobac : 150.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at4g39230 : 149.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00048301-RA","No alias","Pseudotsuga menziesii","(at3g28360 : 324.0) P-glycoprotein 16 (PGP16); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 18 (TAIR:AT3G28390.1); Has 804178 Blast hits to 382236 proteins in 4142 species: Archae - 14262; Bacteria - 629589; Metazoa - 17108; Fungi - 11354; Plants - 9006; Viruses - 43; Other Eukaryotes - 122816 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 320.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00048529-RA","No alias","Pseudotsuga menziesii","(q6vaf9|tba4_goshi : 837.0) Tubulin alpha-4 chain (Alpha-4 tubulin) - Gossypium hirsutum (Upland cotton) & (at1g50010 : 832.0) Encodes alpha-2,4 tubulin.  TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1664.0) &  (original description: no original description)","protein_coding"
"PSME_00048846-RA","No alias","Pseudotsuga menziesii","(at5g19320 : 239.0) Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.; RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"PSME_00049513-RA","No alias","Pseudotsuga menziesii","(at2g22840 : 179.0) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower; growth-regulating factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: Glutamine-Leucine-Glutamine, QLQ (InterPro:IPR014978), WRC (InterPro:IPR014977); BEST Arabidopsis thaliana protein match is: growth-regulating factor 2 (TAIR:AT4G37740.1); Has 714 Blast hits to 669 proteins in 68 species: Archae - 0; Bacteria - 24; Metazoa - 65; Fungi - 20; Plants - 548; Viruses - 4; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00049668-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 162.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 155.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00049791-RA","No alias","Pseudotsuga menziesii","(at2g17845 : 265.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.1); Has 126813 Blast hits to 126599 proteins in 3671 species: Archae - 1009; Bacteria - 81518; Metazoa - 7137; Fungi - 6641; Plants - 3198; Viruses - 2; Other Eukaryotes - 27308 (source: NCBI BLink). & (q949m3|fabg3_brana : 102.0) 3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 3) - Brassica napus (Rape) & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00050112-RA","No alias","Pseudotsuga menziesii","(at5g53530 : 224.0) Homolog of yeast retromer subunit VPS26.  Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; vacuolar protein sorting 26A (VPS26A); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26B (TAIR:AT4G27690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00050271-RA","No alias","Pseudotsuga menziesii","(q42806|kpyc_soybn : 882.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 870.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (reliability: 1740.0) &  (original description: no original description)","protein_coding"
"PSME_00050766-RA","No alias","Pseudotsuga menziesii","(at2g04570 : 114.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT2G42990.1); Has 3619 Blast hits to 3578 proteins in 263 species: Archae - 0; Bacteria - 457; Metazoa - 0; Fungi - 32; Plants - 3114; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (p40603|apg_brana : 97.1) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00050870-RA","No alias","Pseudotsuga menziesii","(at4g31400 : 88.2) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an  N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7  temperature-sensitive mutation.  Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"PSME_00050945-RA","No alias","Pseudotsuga menziesii","(at1g35660 : 222.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 309 Blast hits to 256 proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa - 192; Fungi - 12; Plants - 36; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"PSME_00051290-RA","No alias","Pseudotsuga menziesii","(at5g15750 : 107.0) Alpha-L RNA-binding motif/Ribosomal protein S4 family protein; FUNCTIONS IN: RNA binding, rRNA binding; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), RNA-binding S4 (InterPro:IPR002942); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00051358-RA","No alias","Pseudotsuga menziesii","(at3g05880 : 89.0) Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains.; RARE-COLD-INDUCIBLE 2A (RCI2A); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT3G05890.1); Has 1394 Blast hits to 1394 proteins in 470 species: Archae - 0; Bacteria - 656; Metazoa - 39; Fungi - 282; Plants - 382; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (q6at93|lti6b_orysa : 88.6) Hydrophobic protein LTI6B (Low temperature-induced protein 6B) - Oryza sativa (Rice) & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"PSME_00051562-RA","No alias","Pseudotsuga menziesii","(at5g15310 : 210.0) Member of the R2R3 factor gene family.; myb domain protein 16 (MYB16); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 106 (TAIR:AT3G01140.1); Has 8674 Blast hits to 8179 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 652; Fungi - 457; Plants - 5850; Viruses - 4; Other Eukaryotes - 1711 (source: NCBI BLink). & (p20026|myb1_horvu : 187.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00051939-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052058-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052081-RA","No alias","Pseudotsuga menziesii","(at2g03200 : 124.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00052149-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052748-RA","No alias","Pseudotsuga menziesii","(at2g01830 : 280.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00053657-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053948-RA","No alias","Pseudotsuga menziesii","(at2g39210 : 468.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00053953-RA","No alias","Pseudotsuga menziesii","(at3g05090 : 83.2) Encodes a DCAF protein.  Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.; LATERAL ROOT STIMULATOR 1 (LRS1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: lateral root formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Protein of unknown function DUF3337 (InterPro:IPR021772), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 59803 Blast hits to 26869 proteins in 729 species: Archae - 50; Bacteria - 7042; Metazoa - 23770; Fungi - 14096; Plants - 7202; Viruses - 3; Other Eukaryotes - 7640 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"PSME_00054440-RA","No alias","Pseudotsuga menziesii","(at2g44580 : 285.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"PSME_00054500-RA","No alias","Pseudotsuga menziesii","(at1g55320 : 209.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00054588-RA","No alias","Pseudotsuga menziesii","(at5g46040 : 152.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00054742-RA","No alias","Pseudotsuga menziesii","(p19242|hsp21_pea : 99.8) 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) & (at5g12020 : 81.6) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"PSME_00054825-RA","No alias","Pseudotsuga menziesii","(p52579|ifrh_tobac : 160.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (at1g75300 : 150.0) encodes a protein whose sequence is similar to an isoflavone reductase; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1595 Blast hits to 1591 proteins in 336 species: Archae - 8; Bacteria - 421; Metazoa - 0; Fungi - 508; Plants - 551; Viruses - 7; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00054887-RA","No alias","Pseudotsuga menziesii","(at5g57700 : 174.0) BNR/Asp-box repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 762 Blast hits to 754 proteins in 300 species: Archae - 6; Bacteria - 615; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00054960-RA","No alias","Pseudotsuga menziesii","(at5g61820 : 310.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00055843-RA","No alias","Pseudotsuga menziesii","(at3g26140 : 253.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT1G13130.1); Has 359 Blast hits to 351 proteins in 117 species: Archae - 8; Bacteria - 143; Metazoa - 0; Fungi - 82; Plants - 110; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00055858-RA","No alias","Pseudotsuga menziesii","(p80042|ggpps_capan : 117.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Capsicum an & (at4g36810 : 112.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"PSME_00056370-RA","No alias","Pseudotsuga menziesii","(at1g52760 : 468.0) Encodes a lysophospholipase 2 (LysoPL2). Involved in tolerance to cadmium-induced oxidative stress.  Binds Acyl-CoA-binding protein 2 (ACBP2).; lysophospholipase 2 (LysoPL2); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G11090.1); Has 2373 Blast hits to 2373 proteins in 808 species: Archae - 32; Bacteria - 1418; Metazoa - 106; Fungi - 99; Plants - 433; Viruses - 39; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00057090-RA","No alias","Pseudotsuga menziesii","(at2g45470 : 335.0) FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"PSME_00057170-RA","No alias","Pseudotsuga menziesii","(at1g75620 : 508.0) glyoxal oxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Galactose oxidase, beta-propeller (InterPro:IPR015916), Immunoglobulin E-set (InterPro:IPR014756), Glyoxal oxidase, N-terminal (InterPro:IPR009880), Domain of unknown function DUF1929 (InterPro:IPR015202); BEST Arabidopsis thaliana protein match is: glyoxal oxidase-related protein (TAIR:AT1G19900.1); Has 839 Blast hits to 834 proteins in 169 species: Archae - 0; Bacteria - 315; Metazoa - 0; Fungi - 239; Plants - 267; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"Seita.1G016000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G031600.1","No alias","Setaria italica ","regulatory protein *(NDL) of G-protein signalling","protein_coding"
"Seita.1G041300.1","No alias","Setaria italica ","ATP","protein_coding"
"Seita.1G054800.1","No alias","Setaria italica ","solute transporter *(AAAP)","protein_coding"
"Seita.1G069700.1","No alias","Setaria italica ","RlmI-type rRNA methyltransferase","protein_coding"
"Seita.1G073000.1","No alias","Setaria italica ","ndhA-specific mRNA splicing factor","protein_coding"
"Seita.1G156900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G229900.1","No alias","Setaria italica ","component *(eIF-iso4G) of eIF-iso4F unwinding complex","protein_coding"
"Seita.1G230200.1","No alias","Setaria italica ","nucleotide exchange factor *(CGE)","protein_coding"
"Seita.1G231400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G273600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G289500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G320100.1","No alias","Setaria italica ","substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex","protein_coding"
"Seita.1G321400.1","No alias","Setaria italica ","mTERF-type transcription factor","protein_coding"
"Seita.1G324500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G328100.1","No alias","Setaria italica ","peptidyl-prolyl cis-trans isomerase *(FKBP12)","protein_coding"
"Seita.1G330100.1","No alias","Setaria italica ","1,2-alpha-fucosyltransferase *(FUT)","protein_coding"
"Seita.1G353900.1","No alias","Setaria italica ","cofactor of plastid-encoded RNA polymerase *(TAC17)","protein_coding"
"Seita.1G363000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G377500.1","No alias","Setaria italica ","M3-class (Thimet) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.2G027000.1","No alias","Setaria italica ","LRR-XIV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G057700.1","No alias","Setaria italica ","subunit alpha of tryptophan synthase complex","protein_coding"
"Seita.2G108100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G127100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G130500.1","No alias","Setaria italica ","plastidial ribonucleoprotein *(CP31)","protein_coding"
"Seita.2G191000.1","No alias","Setaria italica ","enolase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Seita.2G201500.1","No alias","Setaria italica ","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Seita.2G230900.1","No alias","Setaria italica ","thylakoid biogenesis chaperone *(SCO2/CYO1) & protein disulfide isomerase *(SCO2/CYO1)","protein_coding"
"Seita.2G250400.1","No alias","Setaria italica ","ATP phosphoribosyl transferase & EC_2.4 glycosyltransferase","protein_coding"
"Seita.2G257800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G292400.1","No alias","Setaria italica ","A1-class (Pepsin) protease","protein_coding"
"Seita.2G335300.1","No alias","Setaria italica ","subfamily ABCG transporter","protein_coding"
"Seita.2G357800.1","No alias","Setaria italica ","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"Seita.2G358300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G368100.1","No alias","Setaria italica ","isoprenyl diphosphate synthase *(IDS) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Seita.2G374500.1","No alias","Setaria italica ","stability factor *(PPR10)","protein_coding"
"Seita.2G382200.1","No alias","Setaria italica ","dihydrofolate synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.2G392500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G421300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G432600.1","No alias","Setaria italica ","alpha-galactosidase *(AGAL) & EC_3.2 glycosylase","protein_coding"
"Seita.3G022000.1","No alias","Setaria italica ","P3A-type proton-translocating ATPase *(AHA)","protein_coding"
"Seita.3G036900.1","No alias","Setaria italica ","bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Seita.3G046400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G059500.1","No alias","Setaria italica ","sucrose-phosphate phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Seita.3G088300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G090300.1","No alias","Setaria italica ","argininosuccinate synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.3G097400.1","No alias","Setaria italica ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.3G126600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G165500.1","No alias","Setaria italica ","mRNA chaperone *(RLSB/BSF)","protein_coding"
"Seita.3G231000.1","No alias","Setaria italica ","prephenate aminotransferase *(PPA-AT)","protein_coding"
"Seita.3G364500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G367300.1","No alias","Setaria italica ","metal cation transporter *(NRAMP) & metal cation transporter *(NRAMP)","protein_coding"
"Seita.3G376800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G393100.1","No alias","Setaria italica ","regulatory protein kinase *(PINOID) of auxin transport & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G023200.1","No alias","Setaria italica ","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & 5-enolpyruvyl-shikimate 3-phosphate (EPSP) synthase","protein_coding"
"Seita.4G026900.1","No alias","Setaria italica ","16S-rRNA maturation factor *(RBF1)","protein_coding"
"Seita.4G086100.1","No alias","Setaria italica ","omega-amidase","protein_coding"
"Seita.4G096300.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & shikimate kinase","protein_coding"
"Seita.4G115800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G141600.1","No alias","Setaria italica ","acyl-CoA","protein_coding"
"Seita.4G187600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G196700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G209000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G235500.1","No alias","Setaria italica ","ent-kaurenoic acid oxidase *(KO1) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Seita.4G286200.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase & starch branching enzyme","protein_coding"
"Seita.5G009500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G016200.1","No alias","Setaria italica ","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G080200.1","No alias","Setaria italica ","xylan beta-1,2-xylosyltransferase","protein_coding"
"Seita.5G105300.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G112100.1","No alias","Setaria italica ","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.5G122800.1","No alias","Setaria italica ","subfamily ABCC transporter","protein_coding"
"Seita.5G139500.1","No alias","Setaria italica ","endoribonuclease *(RNC3/4)","protein_coding"
"Seita.5G172300.1","No alias","Setaria italica ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Seita.5G228200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G243600.1","No alias","Setaria italica ","ATP","protein_coding"
"Seita.5G255600.1","No alias","Setaria italica ","component *(Toc90/120/132/159) of outer envelope TOC translocation system","protein_coding"
"Seita.5G306200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G360500.1","No alias","Setaria italica ","WOX-type transcription factor","protein_coding"
"Seita.5G370800.1","No alias","Setaria italica ","LON-type protease","protein_coding"
"Seita.5G385100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G397000.1","No alias","Setaria italica ","anion transporter *(NRT1/PTR)","protein_coding"
"Seita.5G430100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G462500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G469100.1","No alias","Setaria italica ","RlmN-type rRNA methyltransferase","protein_coding"
"Seita.6G110500.1","No alias","Setaria italica ","indole-3-glycerol phosphate synthase","protein_coding"
"Seita.6G131800.1","No alias","Setaria italica ","RNA editing factor *(DYW7)","protein_coding"
"Seita.6G133800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G193700.1","No alias","Setaria italica ","E3 ubiquitin ligase *(XERICO)","protein_coding"
"Seita.7G098700.1","No alias","Setaria italica ","nicotinate phosphoribosyltransferase *(NAPRT) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.7G122900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G175200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G221200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G233600.1","No alias","Setaria italica ","ent-kaurene synthase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Seita.7G237300.1","No alias","Setaria italica ","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G269200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G277000.1","No alias","Setaria italica ","bZIP class-L transcription factor","protein_coding"
"Seita.8G020200.1","No alias","Setaria italica ","xylan O-acetyltransferase *(XOAT)","protein_coding"
"Seita.8G136700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G030000.1","No alias","Setaria italica ","cofactor of plastid-encoded RNA polymerase *(PAP2/TAC2)","protein_coding"
"Seita.9G084500.1","No alias","Setaria italica ","ATP synthase complex assembly factor *(BFA1)","protein_coding"
"Seita.9G122500.1","No alias","Setaria italica ","component *(DRB7) of DRB4-DRB7.1 siRNA biogenesis regulator complex","protein_coding"
"Seita.9G162600.1","No alias","Setaria italica ","dual-targeted component *(TatA) of plastidial/mitochondrial Tat protein translocase system & dual-targeted component *(TatA) of plastidial/mitochondrial Tat protein translocase system","protein_coding"
"Seita.9G167800.1","No alias","Setaria italica ","N-acetylglutamate-5-phosphate reductase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Seita.9G205700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G360000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G418100.1","No alias","Setaria italica ","component *(U11/U12-65K) of U11/U12 snRNP complex","protein_coding"
"Seita.9G456500.1","No alias","Setaria italica ","subunit alpha of anthranilate synthase complex & EC_4.1 carbon-carbon lyase","protein_coding"
"Seita.9G457100.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding"
"Seita.9G549200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G552000.1","No alias","Setaria italica ","OPC-8","protein_coding"
"Seita.9G574300.1","No alias","Setaria italica ","phosphoglucan phosphatase *(SEX4)","protein_coding"
"Sobic.001G004400.1","No alias","Sorghum bicolor ","nucleocytoplasmic export karyopherin *(XPO1) & export karyopherin *(XPO1) of RNA-induced silencing complex (RISC) export","protein_coding"
"Sobic.001G030000.1","No alias","Sorghum bicolor ","exine patterning factor *(DEX1)","protein_coding"
"Sobic.001G043400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G066500.6","No alias","Sorghum bicolor ","regulatory protein *(ILP) of Programmed Cell Death","protein_coding"
"Sobic.001G097900.1","No alias","Sorghum bicolor ","component *(VPS51/UNH) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Sobic.001G118200.1","No alias","Sorghum bicolor ","Golgin-type membrane tethering protein *(CASP)","protein_coding"
"Sobic.001G137000.1","No alias","Sorghum bicolor ","stabilizing factor of microtubule orientation *(SAB/KIP)","protein_coding"
"Sobic.001G147300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G167100.2","No alias","Sorghum bicolor ","P2B-type calcium cation-transporting ATPase *(ACA)","protein_coding"
"Sobic.001G187800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G190400.1","No alias","Sorghum bicolor ","tyrosyl-DNA phosphodiesterase *(TDP2)","protein_coding"
"Sobic.001G201500.1","No alias","Sorghum bicolor ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Sobic.001G208300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G233700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G290000.1","No alias","Sorghum bicolor ","3-hydroxyisobutyryl-CoA hydrolase *(CHY) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.001G320200.1","No alias","Sorghum bicolor ","phospholipase-D *(PLD-beta/gamma) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.001G335900.1","No alias","Sorghum bicolor ","component *(VPS52/POK) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Sobic.001G336050.1","No alias","Sorghum bicolor ","microtubule plus-end-tracking protein *(SPR1)","protein_coding"
"Sobic.001G372900.3","No alias","Sorghum bicolor ","CDK9 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G384000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G384400.1","No alias","Sorghum bicolor ","alpha-1,3-glucosyltransferase *(ALG6)","protein_coding"
"Sobic.001G385400.1","No alias","Sorghum bicolor ","RopGEF guanine nucleotide exchange factor *(SPIKE)","protein_coding"
"Sobic.001G395300.1","No alias","Sorghum bicolor ","proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex","protein_coding"
"Sobic.001G401700.1","No alias","Sorghum bicolor ","LL-diaminopimelate aminotransferase","protein_coding"
"Sobic.001G419900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G426600.1","No alias","Sorghum bicolor ","component *(TASH3) of TPLATE AP-2 co-adaptor complex","protein_coding"
"Sobic.001G431000.1","No alias","Sorghum bicolor ","component *(HRD3) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Sobic.001G432300.1","No alias","Sorghum bicolor ","imidazoleglycerol-phosphate synthase","protein_coding"
"Sobic.001G451200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G453500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G485600.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.001G493200.3","No alias","Sorghum bicolor ","deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Sobic.001G495200.1","No alias","Sorghum bicolor ","glutathione reductase *(GR) & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Sobic.001G501900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G534800.1","No alias","Sorghum bicolor ","large subunit alpha of AP-2 cargo adaptor complex","protein_coding"
"Sobic.001G535100.1","No alias","Sorghum bicolor ","component *(TRM734) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex","protein_coding"
"Sobic.001G536000.1","No alias","Sorghum bicolor ","component *(ARP4) shared with NuA4/SWR1 complexes & component *(ARP4) of SWR1 chromatin remodeling complex","protein_coding"
"Sobic.002G007100.1","No alias","Sorghum bicolor ","poly-P/G elongation factor *(eEF5/eIF5A))","protein_coding"
"Sobic.002G038300.1","No alias","Sorghum bicolor ","plastidial ribonucleoprotein *(CP33a)","protein_coding"
"Sobic.002G055300.1","No alias","Sorghum bicolor ","splicing factor *(MTL1)","protein_coding"
"Sobic.002G072000.5","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G086900.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G109600.1","No alias","Sorghum bicolor ","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Sobic.002G182000.1","No alias","Sorghum bicolor ","CWF19-type post-transcriptionally regulatory factor","protein_coding"
"Sobic.002G189400.4","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G226100.1","No alias","Sorghum bicolor ","thylakoid biogenesis chaperone *(SCO2/CYO1) & protein disulfide isomerase *(SCO2/CYO1)","protein_coding"
"Sobic.002G252600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G268400.1","No alias","Sorghum bicolor ","cargo receptor protein *(ATI1/2)","protein_coding"
"Sobic.002G304700.1","No alias","Sorghum bicolor ","flippase *(RFT1) & lipid-linked oligosaccharide transporter *(RFT)","protein_coding"
"Sobic.002G331000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G339300.1","No alias","Sorghum bicolor ","class VIII myosin microfilament-based motor protein","protein_coding"
"Sobic.002G340900.1","No alias","Sorghum bicolor ","ARF-GTPase guanyl-nucleotide exchange factor *(BIG)","protein_coding"
"Sobic.002G350400.1","No alias","Sorghum bicolor ","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Sobic.002G354700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G357400.1","No alias","Sorghum bicolor ","HRT-type transcription factor","protein_coding"
"Sobic.002G386400.1","No alias","Sorghum bicolor ","plastidial ribonucleoprotein *(CP29)","protein_coding"
"Sobic.002G386900.7","No alias","Sorghum bicolor ","TruD-type tRNA pseudouridine synthase","protein_coding"
"Sobic.002G401500.1","No alias","Sorghum bicolor ","scaffold component *(Sec31) of coat protein complex","protein_coding"
"Sobic.002G403200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G404900.1","No alias","Sorghum bicolor ","plastidial RNA pseudouridine synthase *(PUS6)","protein_coding"
"Sobic.002G419200.1","No alias","Sorghum bicolor ","LRR-III protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G425700.1","No alias","Sorghum bicolor ","component *(POP1) of RNA-dependent RNase P complex","protein_coding"
"Sobic.003G006400.1","No alias","Sorghum bicolor ","endoribonuclease *(RNase Z) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.003G012200.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & aspartate-tRNA ligase","protein_coding"
"Sobic.003G048600.1","No alias","Sorghum bicolor ","glutaredoxin maturation factor (GRXS15) of iron-sulfur cluster assembly machinery","protein_coding"
"Sobic.003G053900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G057700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G063000.1","No alias","Sorghum bicolor ","nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)","protein_coding"
"Sobic.003G103200.1","No alias","Sorghum bicolor ","component *(Pex14) of cargo-receptor docking complex","protein_coding"
"Sobic.003G113300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G126600.1","No alias","Sorghum bicolor ","accessory component of RAB-GTPase geranylgeranyltransferase (RGT) complex","protein_coding"
"Sobic.003G177350.1","No alias","Sorghum bicolor ","subfamily ABCC transporter","protein_coding"
"Sobic.003G182400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G195900.1","No alias","Sorghum bicolor ","component *(SCD1)of post-Golgi trafficking SCD complex","protein_coding"
"Sobic.003G205100.2","No alias","Sorghum bicolor ","regulatory helicase *(RTEL)","protein_coding"
"Sobic.003G208500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G219500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G237400.1","No alias","Sorghum bicolor ","ATP","protein_coding"
"Sobic.003G240700.1","No alias","Sorghum bicolor ","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding"
"Sobic.003G286300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G293000.1","No alias","Sorghum bicolor ","Golgin-type membrane tethering protein *(GC1)","protein_coding"
"Sobic.003G312100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G326500.1","No alias","Sorghum bicolor ","AP-endonuclease *(ARP) & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.003G330100.1","No alias","Sorghum bicolor ","ribonuclease *(RNC1)","protein_coding"
"Sobic.003G330900.1","No alias","Sorghum bicolor ","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.003G354400.1","No alias","Sorghum bicolor ","acyl CoA oxidase *(ACX) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.003G361400.1","No alias","Sorghum bicolor ","nucleoporin of nuclear pore complex *(NUP62)","protein_coding"
"Sobic.003G362600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G362900.1","No alias","Sorghum bicolor ","component *(TAF12) of SAGA transcription co-activator complex","protein_coding"
"Sobic.003G394300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G396700.1","No alias","Sorghum bicolor ","endoribonuclease *(DCL3)","protein_coding"
"Sobic.003G404400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G422800.1","No alias","Sorghum bicolor ","gamma-aminobutyric acid transporter *(GABP)","protein_coding"
"Sobic.003G431200.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G439600.1","No alias","Sorghum bicolor ","plastidial UMP kinase *(PUMPKIN)","protein_coding"
"Sobic.003G442200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G000500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G004200.1","No alias","Sorghum bicolor ","Sar1-GTPase-regulating protein *(Sec16)","protein_coding"
"Sobic.004G020100.1","No alias","Sorghum bicolor ","regulatory protein (ARC6) of plastid division FtsZ assembly","protein_coding"
"Sobic.004G031400.1","No alias","Sorghum bicolor ","RKF3 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G034300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G050300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G060300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G077300.1","No alias","Sorghum bicolor ","ARF-GTPase guanyl-nucleotide exchange factor *(BIG)","protein_coding"
"Sobic.004G084400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G087500.1","No alias","Sorghum bicolor ","ATP","protein_coding"
"Sobic.004G105500.1","No alias","Sorghum bicolor ","transcriptional co-repressor *(ECAP)","protein_coding"
"Sobic.004G131040.1","No alias","Sorghum bicolor ","unfoldase component *(ClpX) of mitochondrion Clp-type protease complex","protein_coding"
"Sobic.004G204900.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor & glucose-6-phosphate dehydrogenase","protein_coding"
"Sobic.004G225000.1","No alias","Sorghum bicolor ","nitrilase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Sobic.004G232000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G260100.2","No alias","Sorghum bicolor ","regulatory protein *(FRIENDLY) of mitochondrion division","protein_coding"
"Sobic.004G265900.1","No alias","Sorghum bicolor ","small subunit *(CarA) of carbamoyl phosphate synthetase heterodimer & small subunit of carbamoyl phosphate synthetase heterodimer & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.004G277200.1","No alias","Sorghum bicolor ","component *(PIG-U) of GPI transamidase complex","protein_coding"
"Sobic.004G285000.1","No alias","Sorghum bicolor ","component *(MTA) of adenosine N6-methyltransferase complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.004G327500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G358600.1","No alias","Sorghum bicolor ","zinc cation transporter *(Zn-CDF) & zinc cation transporter *(Zn-CDF)","protein_coding"
"Sobic.005G003300.1","No alias","Sorghum bicolor ","heavy chain of clathrin triskelion","protein_coding"
"Sobic.005G017000.1","No alias","Sorghum bicolor ","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.005G040900.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase component *(HRD1) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Sobic.005G082200.1","No alias","Sorghum bicolor ","regulatory subunit of acetolactate synthase complex & regulatory subunit of acetolactate synthase complex","protein_coding"
"Sobic.005G094001.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G123700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G220101.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G225400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G024500.1","No alias","Sorghum bicolor ","regulatory protein *(LEJ1/2) of thiol-based redox regulation","protein_coding"
"Sobic.006G034000.1","No alias","Sorghum bicolor ","protein S-acyltransferase *(PAT12-14)","protein_coding"
"Sobic.006G077300.1","No alias","Sorghum bicolor ","component *(SEC5) of Exocyst complex","protein_coding"
"Sobic.006G109500.1","No alias","Sorghum bicolor ","betaine-aldehyde dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.006G126400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G126600.1","No alias","Sorghum bicolor ","Trihelix-type transcription factor","protein_coding"
"Sobic.006G131200.1","No alias","Sorghum bicolor ","component *(NRPC1) of RNA polymerase III complex","protein_coding"
"Sobic.006G141600.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.006G157400.1","No alias","Sorghum bicolor ","Qa-type SYP8-group component of SNARE membrane fusion complex","protein_coding"
"Sobic.006G179000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G185200.4","No alias","Sorghum bicolor ","component *(NRPD1) of RNA polymerase IV complex","protein_coding"
"Sobic.006G203300.1","No alias","Sorghum bicolor ","cold sensor *(COLD1) & plasma membrane-localized abscisic acid receptor *(GTG)","protein_coding"
"Sobic.006G204100.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.006G217000.1","No alias","Sorghum bicolor ","imidazoleglycerol-phosphate dehydratase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.006G219300.2","No alias","Sorghum bicolor ","glutathione S-conjugate transporter & subfamily ABCC transporter","protein_coding"
"Sobic.006G224800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G254300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G282200.1","No alias","Sorghum bicolor ","component *(OST1) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.007G036700.3","No alias","Sorghum bicolor ","histone demethylase *(KDM1a/b/c)","protein_coding"
"Sobic.007G086600.1","No alias","Sorghum bicolor ","indole-3-glycerol phosphate synthase","protein_coding"
"Sobic.007G090430.1","No alias","Sorghum bicolor ","UFM1-specific protease","protein_coding"
"Sobic.007G112600.1","No alias","Sorghum bicolor ","nucleotide exchange factor *(MGE)","protein_coding"
"Sobic.007G131200.1","No alias","Sorghum bicolor ","assembly factor involved in RuBisCo assembly *(RbcX)","protein_coding"
"Sobic.007G145100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G146600.1","No alias","Sorghum bicolor ","component *(COG3) of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Sobic.007G165600.1","No alias","Sorghum bicolor ","broad substrate-specificity aminopeptidase *(MPA1)","protein_coding"
"Sobic.007G172400.1","No alias","Sorghum bicolor ","component *(Pex1) of Pex1-Pex6 subcomplex","protein_coding"
"Sobic.007G173500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G183700.1","No alias","Sorghum bicolor ","regulatory protein *(LARP6) of mRNA quality control","protein_coding"
"Sobic.007G188200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G196900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G227600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G001500.1","No alias","Sorghum bicolor ","component *(SR-beta) of SRP (signal recognition particle) receptor complex","protein_coding"
"Sobic.008G032500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G097900.1","No alias","Sorghum bicolor ","DLSV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.008G100400.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G103200.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.008G124800.1","No alias","Sorghum bicolor ","component *(TRS130/CLUB) of TRAPP-II complex-specific components","protein_coding"
"Sobic.008G132900.1","No alias","Sorghum bicolor ","component *(ZFC3H1) of PAXT nucleoplasmic activation complex","protein_coding"
"Sobic.008G137600.1","No alias","Sorghum bicolor ","RNA splicing factor *(SCL28/30/33)","protein_coding"
"Sobic.008G148400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G173400.1","No alias","Sorghum bicolor ","component *(eIF2B-delta) of eIF2B eIF2-GDP recycling complex","protein_coding"
"Sobic.008G176000.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP5/8-11)","protein_coding"
"Sobic.008G190600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G000100.1","No alias","Sorghum bicolor ","component *(SNL) of histone deacetylase machineries","protein_coding"
"Sobic.009G010300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G035100.1","No alias","Sorghum bicolor ","1,4-dihydroxy-2-naphthoyl-CoA thioesterase *(MenH/DHNAT)","protein_coding"
"Sobic.009G036300.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.009G038200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G046800.1","No alias","Sorghum bicolor ","component *(Toc90/120/132/159) of outer envelope TOC translocation system","protein_coding"
"Sobic.009G065200.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(DRR1)","protein_coding"
"Sobic.009G068700.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & glutamine-tRNA ligase","protein_coding"
"Sobic.009G072000.1","No alias","Sorghum bicolor ","aminoimidazole RN synthetase *(PUR5)","protein_coding"
"Sobic.009G074700.1","No alias","Sorghum bicolor ","accessory component *(Sec63) of co-translational insertion system","protein_coding"
"Sobic.009G081500.1","No alias","Sorghum bicolor ","GPI lipid remodeling hydrolase *(PGAP3)","protein_coding"
"Sobic.009G109925.1","No alias","Sorghum bicolor ","phospholipase-D *(PLD-zeta)","protein_coding"
"Sobic.009G137000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G145101.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G164500.1","No alias","Sorghum bicolor ","subunit zeta of cargo adaptor F-subcomplex","protein_coding"
"Sobic.009G173800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G210800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G213800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G214200.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.009G229600.1","No alias","Sorghum bicolor ","Golgin-type membrane tethering protein *(GC5/TMF)","protein_coding"
"Sobic.009G233800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G233900.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.009G238100.2","No alias","Sorghum bicolor ","plastidial RNA basal splicing factor *(WTF1)","protein_coding"
"Sobic.009G252800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G254200.1","No alias","Sorghum bicolor ","RNA editing factor *(DYW2)","protein_coding"
"Sobic.009G258400.1","No alias","Sorghum bicolor ","regulatory component *(RPN13) of 26S proteasome","protein_coding"
"Sobic.010G016600.2","No alias","Sorghum bicolor ","SETD-type lysine N-methyltransferase","protein_coding"
"Sobic.010G028000.1","No alias","Sorghum bicolor ","16S-rRNA maturation factor *(RBF1)","protein_coding"
"Sobic.010G035500.1","No alias","Sorghum bicolor ","scaffold protein SUF-A of plastidial SUF system transfer phase","protein_coding"
"Sobic.010G051300.1","No alias","Sorghum bicolor ","prolyl aminopeptidase *(PAP2)","protein_coding"
"Sobic.010G053800.1","No alias","Sorghum bicolor ","large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex","protein_coding"
"Sobic.010G056100.1","No alias","Sorghum bicolor ","endonuclease *(FAN1)","protein_coding"
"Sobic.010G057300.1","No alias","Sorghum bicolor ","galactinol-sucrose galactosyltransferase","protein_coding"
"Sobic.010G080700.2","No alias","Sorghum bicolor ","component *(NRPC2) of RNA polymerase III complex","protein_coding"
"Sobic.010G083900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G101800.1","No alias","Sorghum bicolor ","clathrin coated vesicle dynamin *(DRP2)","protein_coding"
"Sobic.010G114900.1","No alias","Sorghum bicolor ","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"Sobic.010G132300.2","No alias","Sorghum bicolor ","reticulophagy cargo receptor *(C53)","protein_coding"
"Sobic.010G138000.1","No alias","Sorghum bicolor ","cryptochrome photoreceptor *(CRY)","protein_coding"
"Sobic.010G187600.1","No alias","Sorghum bicolor ","regulatory component *(RPT4) of 26S proteasome","protein_coding"
"Sobic.010G189000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G210800.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase","protein_coding"
"Sobic.010G224000.3","No alias","Sorghum bicolor ","molybdopterin sulfurase *(ABA3) & xanthoxin oxidase molybdopterin sulfurase *(ABA3)","protein_coding"
"Sobic.010G224700.1","No alias","Sorghum bicolor ","DNA primase and helicase *(TWINKLE)","protein_coding"
"Sobic.010G253100.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.010G258000.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.010G268200.1","No alias","Sorghum bicolor ","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"Sobic.010G278600.1","No alias","Sorghum bicolor ","regulatory protein *(NERD1) of exocytic trafficking","protein_coding"
"Solyc01g006020","No alias","Solanum lycopersicum","6,7-dimethyl-8-ribityllumazine synthase (AHRD V3.3 *** AT3G32930.2)","protein_coding"
"Solyc01g008980","No alias","Solanum lycopersicum","BZIP transcription factor (AHRD V3.3 *** A0A072UF45_MEDTR)","protein_coding"
"Solyc01g009380","No alias","Solanum lycopersicum","Nicalin (AHRD V3.3 *** A0A166DJQ4_DAUCA)","protein_coding"
"Solyc01g012650","No alias","Solanum lycopersicum","LOW QUALITY:Dicer-like protein 2 (AHRD V3.3 *-* F8SXT7_NICAT)","protein_coding"
"Solyc01g057590","No alias","Solanum lycopersicum","Leucine-rich repeat protein kinase family protein (AHRD V3.3 --* AT5G62710.2)","protein_coding"
"Solyc01g068250","No alias","Solanum lycopersicum","LOW QUALITY:Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FJT3_THECC)","protein_coding"
"Solyc01g079060","No alias","Solanum lycopersicum","Charged multivesicular body 7 (AHRD V3.3 *-* A0A0B0PQU1_GOSAR)","protein_coding"
"Solyc01g079650","No alias","Solanum lycopersicum","CTP synthase (AHRD V3.3 *** A0A0V0IPL0_SOLCH)","protein_coding"
"Solyc01g091800","No alias","Solanum lycopersicum","rRNA adenine N(6)-methyltransferase (AHRD V3.3 *** K4AZC0_SOLLC)","protein_coding"
"Solyc01g094830","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *-* K4AZM3_SOLLC)","protein_coding"
"Solyc01g095600","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9RZB6_RICCO)","protein_coding"
"Solyc01g096040","No alias","Solanum lycopersicum","Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G01300.1)","protein_coding"
"Solyc01g096400","No alias","Solanum lycopersicum","Transglutaminase family protein (AHRD V3.3 *** G7J0K8_MEDTR)","protein_coding"
"Solyc01g097000","No alias","Solanum lycopersicum","Beta-glucosidase (AHRD V3.3 *** A0A0B4PJM3_SOYBN)","protein_coding"
"Solyc01g097390","No alias","Solanum lycopersicum","NAD(P)-linked oxidoreductase superfamily protein (AHRD V3.3 *** A0A061F182_THECC)","protein_coding"
"Solyc01g097840","No alias","Solanum lycopersicum","MAP kinase kinase kinase 6","protein_coding"
"Solyc01g098690","No alias","Solanum lycopersicum","LOW QUALITY:Leucine-rich-repeat receptor-like protein (AHRD V3.3 *** A0A097BR55_GOSBA)","protein_coding"
"Solyc01g099600","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein, putative (AHRD V3.3 *** A0A061F2B7_THECC)","protein_coding"
"Solyc01g099950","No alias","Solanum lycopersicum","Pectinesterase (AHRD V3.3 *** K4B129_SOLLC)","protein_coding"
"Solyc01g107330","No alias","Solanum lycopersicum","SWIB_MDM2 domain protein","protein_coding"
"Solyc01g107640","No alias","Solanum lycopersicum","Protein TIC 21, chloroplastic (AHRD V3.3 *** A0A0B2PGL4_GLYSO)","protein_coding"
"Solyc01g109190","No alias","Solanum lycopersicum","LOW QUALITY:nuclear factor Y, subunit A10 (AHRD V3.3 --* AT5G06510.6)","protein_coding"
"Solyc01g111520","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5)","protein_coding"
"Solyc01g111600","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** AT4G35060.1)","protein_coding"
"Solyc02g014870","No alias","Solanum lycopersicum","Thioredoxin-like protein 4A (AHRD V3.3 *** A0A151RDS9_CAJCA)","protein_coding"
"Solyc02g021700","No alias","Solanum lycopersicum","Alpha N-terminal protein methyltransferase 1 (AHRD V3.3 *** W9QEM5_9ROSA)","protein_coding"
"Solyc02g061900","No alias","Solanum lycopersicum","LOW QUALITY:NAC domain-containing protein, putative (AHRD V3.3 *** B9SVG2_RICCO)","protein_coding"
"Solyc02g067360","No alias","Solanum lycopersicum","Protease Do-like 8, chloroplastic (AHRD V3.3 *** DEGP8_ARATH)","protein_coding"
"Solyc02g067370","No alias","Solanum lycopersicum","Nucleosome assembly protein family (AHRD V3.3 *** A9RDJ7_PHYPA)","protein_coding"
"Solyc02g067560","No alias","Solanum lycopersicum","Receptor-like kinase (AHRD V3.3 *** A0A0K9P790_ZOSMR)","protein_coding"
"Solyc02g069100","No alias","Solanum lycopersicum","Cathepsin B-like cysteine protease (AHRD V3.3 *** B7FJ05_MEDTR)","protein_coding"
"Solyc02g070390","No alias","Solanum lycopersicum","plastid transcriptionally active 12 (AHRD V3.3 *** AT2G34640.1)","protein_coding"
"Solyc02g070800","No alias","Solanum lycopersicum","Thiamine monophosphate synthase (AHRD V3.3 *** I3SV46_MEDTR)","protein_coding"
"Solyc02g078900","No alias","Solanum lycopersicum","Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial (AHRD V3.3 *** A0A199VZH3_ANACO)","protein_coding"
"Solyc02g079730","No alias","Solanum lycopersicum","Thioredoxin family protein, putative (AHRD V3.3 *** G7LIP5_MEDTR)","protein_coding"
"Solyc02g081880","No alias","Solanum lycopersicum","Molybdenum cofactor sulfurase family protein (AHRD V3.3 *** AT1G30910.1)","protein_coding"
"Solyc02g085310","No alias","Solanum lycopersicum","plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 --* AT3G17227.1)","protein_coding"
"Solyc02g087560","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YHD1_CYNCS)","protein_coding"
"Solyc02g089550","No alias","Solanum lycopersicum","NSP-interacting kinase 1 (AHRD V3.3 *** AT5G16000.1)","protein_coding"
"Solyc02g089660","No alias","Solanum lycopersicum","Titin (AHRD V3.3 *** A0A0B0NSM2_GOSAR)","protein_coding"
"Solyc02g090390","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9N888_POPTR)","protein_coding"
"Solyc02g091840","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** F8WS84_SOLLC)","protein_coding"
"Solyc02g091950","No alias","Solanum lycopersicum","Lysosomal Pro-X carboxypeptidase (AHRD V3.3 *-* Q9FLH1_ARATH)","protein_coding"
"Solyc02g094110","No alias","Solanum lycopersicum","Cytochrome P450, putative (AHRD V3.3 *** B9RBJ0_RICCO)","protein_coding"
"Solyc03g007860","No alias","Solanum lycopersicum","Protein PAM68, chloroplastic (AHRD V3.3 *-* PAM68_ARATH)","protein_coding"
"Solyc03g019890","No alias","Solanum lycopersicum","beta-galactosidase 7","protein_coding"
"Solyc03g025630","No alias","Solanum lycopersicum","Tripeptidyl-peptidase 2 (AHRD V3.3 *-* A0A0B0NVF8_GOSAR)","protein_coding"
"Solyc03g031600","No alias","Solanum lycopersicum","Peroxisomal membrane protein PMP22 (AHRD V3.3 *** A0A0B0NRG7_GOSAR)","protein_coding"
"Solyc03g033480","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT4G35987.1)","protein_coding"
"Solyc03g034130","No alias","Solanum lycopersicum","Homeobox-leucine zipper family protein (AHRD V3.3 *** B9MXR7_POPTR)","protein_coding"
"Solyc03g034190","No alias","Solanum lycopersicum","30S ribosomal protein 3 (AHRD V3.3 *** W9SB90_9ROSA)","protein_coding"
"Solyc03g044200","No alias","Solanum lycopersicum","Alcohol dehydrogenase (AHRD V3.3 *** Q43169_SOLTU)","protein_coding"
"Solyc03g044630","No alias","Solanum lycopersicum","DUF309 domain protein (AHRD V3.3 *** AT2G41120.1)","protein_coding"
"Solyc03g045020","No alias","Solanum lycopersicum","Tyrosine decarboxylase (AHRD V3.3 *** W5XTE8_SOLTU)","protein_coding"
"Solyc03g058960","No alias","Solanum lycopersicum","Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (AHRD V3.3 *-* A0A151TQB6_CAJCA)","protein_coding"
"Solyc03g063280","No alias","Solanum lycopersicum","Emsy N terminus domain-containing family protein (AHRD V3.3 *** B9HPS6_POPTR)","protein_coding"
"Solyc03g063640","No alias","Solanum lycopersicum","HEAT repeat-containing protein (AHRD V3.3 --* AT1G67140.3)","protein_coding"
"Solyc03g063770","No alias","Solanum lycopersicum","Ribosomal protein S3 (AHRD V3.3 *** I3NTU9_9ASTE)","protein_coding"
"Solyc03g071870","No alias","Solanum lycopersicum","Phenylalanine ammonia-lyase (AHRD V3.3 *-* PAL5_SOLLC)","protein_coding"
"Solyc03g078080","No alias","Solanum lycopersicum","Uridylate kinase (AHRD V3.3 *** W9QLW7_9ROSA)","protein_coding"
"Solyc03g083610","No alias","Solanum lycopersicum","UMP-CMP kinase (AHRD V3.3 *** A0A162A1U3_DAUCA)","protein_coding"
"Solyc03g083720","No alias","Solanum lycopersicum","LOW QUALITY:Plant invertase/pectin methylesterase inhibitor (AHRD V3.3 *** I3T947_MEDTR)","protein_coding"
"Solyc03g093150","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A124SFW5_CYNCS)","protein_coding"
"Solyc03g093880","No alias","Solanum lycopersicum","U6 snRNA phosphodiesterase (AHRD V3.3 *** K4BIR4_SOLLC)","protein_coding"
"Solyc03g094110","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** A0A164WZ41_DAUCA)","protein_coding"
"Solyc03g095180","No alias","Solanum lycopersicum","Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC)","protein_coding"
"Solyc03g111260","No alias","Solanum lycopersicum","Ribonuclease J (AHRD V3.3 *** A0A0B0P255_GOSAR)","protein_coding"
"Solyc03g112420","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XY30_CYNCS)","protein_coding"
"Solyc03g114510","No alias","Solanum lycopersicum","2-aminoethanethiol dioxygenase (AHRD V3.3 *** A0A0B0NKG5_GOSAR)","protein_coding"
"Solyc03g115970","No alias","Solanum lycopersicum","Protein yippee-like (AHRD V3.3 *** K4C9V4_SOLLC)","protein_coding"
"Solyc03g116540","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SY25_RICCO)","protein_coding"
"Solyc03g116770","No alias","Solanum lycopersicum","seed dormancy control protein (AHRD V3.3 *** AT1G15320.2)","protein_coding"
"Solyc03g118170","No alias","Solanum lycopersicum","Glycyl-tRNA synthetase family protein (AHRD V3.3 *** B9GMU1_POPTR)","protein_coding"
"Solyc03g118250","No alias","Solanum lycopersicum","mRNA cap guanine-N7 methyltransferase (AHRD V3.3 *** K4BLX6_SOLLC)","protein_coding"
"Solyc03g119970","No alias","Solanum lycopersicum","ATP/ADP transporter (AHRD V3.3 *** A0A0X9Q301_MENSP)","protein_coding"
"Solyc03g120310","No alias","Solanum lycopersicum","Glycosyltransferase, putative (AHRD V3.3 *** B9SQA7_RICCO)","protein_coding"
"Solyc03g121070","No alias","Solanum lycopersicum","hexokinase","protein_coding"
"Solyc03g123620","No alias","Solanum lycopersicum","Pectinesterase (AHRD V1 ***- B9GXZ7_POPTR)","protein_coding"
"Solyc03g123630","No alias","Solanum lycopersicum","pectin methylesterase","protein_coding"
"Solyc03g123880","No alias","Solanum lycopersicum","Glutamyl-tRNA reductase binding protein (AHRD V3.3 *** E9N732_TOBAC)","protein_coding"
"Solyc04g005780","No alias","Solanum lycopersicum","LOW QUALITY:glyoxal oxidase-related protein (AHRD V3.3 *** AT1G14430.1)","protein_coding"
"Solyc04g007900","No alias","Solanum lycopersicum","Plant cadmium resistance 2, putative (AHRD V3.3 *** A0A061E9L3_THECC)","protein_coding"
"Solyc04g008730","No alias","Solanum lycopersicum","Alpha-galactosidase (AHRD V3.3 *** K4BP29_SOLLC)","protein_coding"
"Solyc04g014680","No alias","Solanum lycopersicum","Ubiquitin-specific protease family C19-related protein (AHRD V3.3 *** AT4G22290.1)","protein_coding"
"Solyc04g015480","No alias","Solanum lycopersicum","BTB/POZ domain-containing protein TNFAIP1 isoform 2 (AHRD V3.3 *** A0A061DKW6_THECC)","protein_coding"
"Solyc04g015560","No alias","Solanum lycopersicum","Beta-glucosidase (AHRD V3.3 *** A0A0B4PJM3_SOYBN)","protein_coding"
"Solyc04g016540","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2Q1K7_GLYSO)","protein_coding"
"Solyc04g026380","No alias","Solanum lycopersicum","AP-1 complex subunit mu (AHRD V3.3 *** G5DWW9_SILLA)","protein_coding"
"Solyc04g039610","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g049710","No alias","Solanum lycopersicum","Tonneau protein 1b (AHRD V3.3 *** G7IAX0_MEDTR)","protein_coding"
"Solyc04g054310","No alias","Solanum lycopersicum","Alanine-glyoxylate aminotransferase, putative (AHRD V3.3 *** B9T1D1_RICCO)","protein_coding"
"Solyc04g056300","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g057910","No alias","Solanum lycopersicum","Yippee family putative zinc-binding protein (AHRD V3.3 --* AT2G40110.4)","protein_coding"
"Solyc04g071990","No alias","Solanum lycopersicum","GIGANTEA (AHRD V3.3 *** F2Z6M2_IPONI)","protein_coding"
"Solyc04g077870","No alias","Solanum lycopersicum","Calcium-transporting ATPase (AHRD V3.3 *** M1BXT8_SOLTU)","protein_coding"
"Solyc04g078740","No alias","Solanum lycopersicum","Subtilisin-like protease (AHRD V3.3 *** W9SHY0_9ROSA)","protein_coding"
"Solyc04g082720","No alias","Solanum lycopersicum","HSP20-like chaperones superfamily protein (AHRD V3.3 *** AT1G76440.3)","protein_coding"
"Solyc05g006040","No alias","Solanum lycopersicum","Serine/Threonine-kinase (AHRD V3.3 *-* AT1G10522.2)","protein_coding"
"Solyc05g009030","No alias","Solanum lycopersicum","3-isopropylmalate dehydrogenase (AHRD V3.3 *** K4BX77_SOLLC)","protein_coding"
"Solyc05g009630","No alias","Solanum lycopersicum","Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS)","protein_coding"
"Solyc05g010240","No alias","Solanum lycopersicum","Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)","protein_coding"
"Solyc05g012450","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G78240.2)","protein_coding"
"Solyc05g013560","No alias","Solanum lycopersicum","serine-rich protein-like protein (AHRD V3.3 *-* AT5G55980.1)","protein_coding"
"Solyc05g014910","No alias","Solanum lycopersicum","LOW QUALITY:Protein FAR1-RELATED SEQUENCE 5 (AHRD V3.3 *-* A0A199V309_ANACO)","protein_coding"
"Solyc05g023600","No alias","Solanum lycopersicum","Sister-chromatide cohesion protein 3 (AHRD V3.3 --* D7LHE4_ARALL)","protein_coding"
"Solyc05g025750","No alias","Solanum lycopersicum","SH3 domain-containing protein (AHRD V3.3 *-* AT2G07360.2)","protein_coding"
"Solyc05g050580","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** K4C190_SOLLC)","protein_coding"
"Solyc05g055350","No alias","Solanum lycopersicum","Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR)","protein_coding"
"Solyc06g006000","No alias","Solanum lycopersicum","Maternal effect embryo arrest 59 (AHRD V3.3 *** A0A061GXA8_THECC)","protein_coding"
"Solyc06g006100","No alias","Solanum lycopersicum","Anthranilate synthase (AHRD V3.3 *** A0A0K9NQE9_ZOSMR)","protein_coding"
"Solyc06g007760","No alias","Solanum lycopersicum","YCF54 (AHRD V3.3 *** AT5G58250.1)","protein_coding"
"Solyc06g008710","No alias","Solanum lycopersicum","Cullin 1 (AHRD V3.3 *** A0A0D4D5H0_SOLLC)","protein_coding"
"Solyc06g009630","No alias","Solanum lycopersicum","CP12 (AHRD V3.3 *** O24136_TOBAC)","protein_coding"
"Solyc06g036320","No alias","Solanum lycopersicum","Serine/threonine protein phosphatase 7 long form isogeny (AHRD V3.3 *-* A0A151SGZ7_CAJCA)","protein_coding"
"Solyc06g042930","No alias","Solanum lycopersicum","LOW QUALITY:pesticidal crystal cry8Ba protein (AHRD V3.3 --* AT4G24610.4)","protein_coding"
"Solyc06g049070","No alias","Solanum lycopersicum","Nucleotide/sugar transporter family protein (AHRD V3.3 *** AT2G30460.2)","protein_coding"
"Solyc06g050210","No alias","Solanum lycopersicum","TLC ATP/ADP transporter (AHRD V3.3 *** A0A061FRW5_THECC)","protein_coding"
"Solyc06g050840","No alias","Solanum lycopersicum","bHLH transcription factor135","protein_coding"
"Solyc06g051410","No alias","Solanum lycopersicum","Phosphoribosylanthranilate isomerase (AHRD V3.3 *** F1BPW4_SOLPN)","protein_coding"
"Solyc06g053150","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT2G46620.1)","protein_coding"
"Solyc06g060100","No alias","Solanum lycopersicum","Mannose-6-phosphate isomerase (AHRD V3.3 *** K4C6J1_SOLLC)","protein_coding"
"Solyc06g061130","No alias","Solanum lycopersicum","Gag-Pol polyprotein/retrotransposon (AHRD V3.3 *** AT2G38695.1)","protein_coding"
"Solyc06g062290","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** K4C6W0_SOLLC)","protein_coding"
"Solyc06g068990","No alias","Solanum lycopersicum","Mitogen-activated protein kinase (AHRD V3.3 *** A0A022QA30_ERYGU)","protein_coding"
"Solyc06g069690","No alias","Solanum lycopersicum","Timing of cab expression 1/pseudo-response regulator 1 (AHRD V3.3 *-* J9PWT0_NICAT)","protein_coding"
"Solyc06g071180","No alias","Solanum lycopersicum","Dynein light chain (AHRD V3.3 *** W9QNT0_9ROSA)","protein_coding"
"Solyc06g072040","No alias","Solanum lycopersicum","CONSTANS interacting protein 2a","protein_coding"
"Solyc06g072060","No alias","Solanum lycopersicum","LOW QUALITY:transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** AT5G08391.1)","protein_coding"
"Solyc06g073280","No alias","Solanum lycopersicum","Aminotransferase (AHRD V3.3 *** C1FDC5_MICCC)","protein_coding"
"Solyc06g074380","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT2G27590.1)","protein_coding"
"Solyc06g082600","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme E2-like protein (AHRD V3.3 *** Q2PYY4_SOLTU)","protein_coding"
"Solyc06g082810","No alias","Solanum lycopersicum","Oligoribonuclease (AHRD V3.3 *** A0A151U1P3_CAJCA)","protein_coding"
"Solyc06g084460","No alias","Solanum lycopersicum","Shikimate dehydrogenase, 3-dehydroquinate dehydratase (AHRD V3.3 *** A0A0K9PLS3_ZOSMR)","protein_coding"
"Solyc07g007470","No alias","Solanum lycopersicum","LOW QUALITY:Germin-like protein 12-1 (AHRD V3.3 --* GL121_ORYSJ)","protein_coding"
"Solyc07g008560","No alias","Solanum lycopersicum","Purple acid phosphatase (AHRD V3.3 *** K4CBX4_SOLLC)","protein_coding"
"Solyc07g014730","No alias","Solanum lycopersicum","Phospholipase A2 (AHRD V3.3 *** Q5CCT8_TOBAC)","protein_coding"
"Solyc07g040870","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc07g041720","No alias","Solanum lycopersicum","Germin-like protein (AHRD V3.3 *** G3F4I5_CAMSI)","protein_coding"
"Solyc07g049470","No alias","Solanum lycopersicum","Triacylglycerol lipase 2, putative (AHRD V3.3 *-* B9SSJ8_RICCO)","protein_coding"
"Solyc07g052350","No alias","Solanum lycopersicum","Aconitate hydratase (AHRD V3.3 *** K4CFD4_SOLLC)","protein_coding"
"Solyc07g055050","No alias","Solanum lycopersicum","ATP synthase protein I-like protein (AHRD V3.3 *** AT2G31040.1)","protein_coding"
"Solyc07g055540","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** A0A124SAX2_CYNCS)","protein_coding"
"Solyc07g055720","No alias","Solanum lycopersicum","Heat shock protein, putative (AHRD V3.3 *** Q8LD91_ARATH)","protein_coding"
"Solyc07g066320","No alias","Solanum lycopersicum","DNA repair protein recA (AHRD V3.3 *** U5GXJ6_POPTR)","protein_coding"
"Solyc08g005490","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G31850.4)","protein_coding"
"Solyc08g008180","No alias","Solanum lycopersicum","Loricrin-like (AHRD V3.3 *** A0A0K9PKU0_ZOSMR)","protein_coding"
"Solyc08g014130","No alias","Solanum lycopersicum","Isopropylmalate synthase (AHRD V3.3 *** K4CJ46_SOLLC)","protein_coding"
"Solyc08g015860","No alias","Solanum lycopersicum","Rab GDP dissociation inhibitor (AHRD V3.3 *** C0LSK7_NICBE)","protein_coding"
"Solyc08g041710","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT2G25270.1)","protein_coding"
"Solyc08g048390","No alias","Solanum lycopersicum","TCP transcription factor 24","protein_coding"
"Solyc08g065260","No alias","Solanum lycopersicum","ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 --* CLPP_GOSBA)","protein_coding"
"Solyc08g065290","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g065870","No alias","Solanum lycopersicum","EARLY FLOWERING 3 (AHRD V3.3 *** A0A088PY80_9ROSI)","protein_coding"
"Solyc08g066920","No alias","Solanum lycopersicum","ATP/ADP transporter (AHRD V3.3 *-* A0A0X9Q301_MENSP)","protein_coding"
"Solyc08g067840","No alias","Solanum lycopersicum","Photosystem II reaction center PsbP family protein (AHRD V3.3 *** A0A0F7GYP2_9ROSI)","protein_coding"
"Solyc08g067920","No alias","Solanum lycopersicum","Enhancer of polycomb-like transcription factor protein, putative isoform 1 (AHRD V3.3 *** A0A061GQB3_THECC)","protein_coding"
"Solyc08g068200","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Solyc08g068920","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *** AT5G24970.3)","protein_coding"
"Solyc08g075740","No alias","Solanum lycopersicum","LOW QUALITY:male gametophyte defective 3 (AHRD V3.3 --* AT1G68990.2)","protein_coding"
"Solyc08g075920","No alias","Solanum lycopersicum","Protein BREVIS RADIX (AHRD V3.3 *** A0A0B2R5Q1_GLYSO)","protein_coding"
"Solyc08g077490","No alias","Solanum lycopersicum","pleckstrin homology (PH) domain-containing protein (AHRD V3.3 *-* AT4G17140.3)","protein_coding"
"Solyc08g077500","No alias","Solanum lycopersicum","Pleckstrin (PH) domain-containing protein isoform 1 (AHRD V3.3 *** A0A061G2P4_THECC)","protein_coding"
"Solyc08g082480","No alias","Solanum lycopersicum","Phosphatidylinositol 3-and 4-kinase family protein (AHRD V3.3 *** B9GL47_POPTR)","protein_coding"
"Solyc09g005700","No alias","Solanum lycopersicum","diaminopimelate epimerase family protein (AHRD V3.3 *** AT3G53580.1)","protein_coding"
"Solyc09g005710","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061ES09_THECC)","protein_coding"
"Solyc09g007040","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** D7LUH3_ARALL)","protein_coding"
"Solyc09g007310","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A072VW29_MEDTR)","protein_coding"
"Solyc09g007560","No alias","Solanum lycopersicum","50S ribosomal protein L5 (AHRD V3.3 *** B5TV71_CAMSI)","protein_coding"
"Solyc09g007640","No alias","Solanum lycopersicum","Carboxypeptidase (AHRD V3.3 *** K4CQF3_SOLLC)","protein_coding"
"Solyc09g008000","No alias","Solanum lycopersicum","ABC transporter G family-like protein (AHRD V3.3 *** A0A072UJT7_MEDTR)","protein_coding"
"Solyc09g009190","No alias","Solanum lycopersicum","Starch branching enzyme (AHRD V3.3 *** Q9XIS5_PHAVU)","protein_coding"
"Solyc09g009430","No alias","Solanum lycopersicum","Cell division protein ftsZ, putative (AHRD V3.3 *** B9SRX2_RICCO)","protein_coding"
"Solyc09g015550","No alias","Solanum lycopersicum","LOW QUALITY:Movement protein (AHRD V3.3 *-* A0A151UGG0_CAJCA)","protein_coding"
"Solyc09g015650","No alias","Solanum lycopersicum","Non-green plastid inner envelope membrane protein (AHRD V3.3 *** G7KY60_MEDTR)","protein_coding"
"Solyc09g018220","No alias","Solanum lycopersicum","Tobacco mosaic virus resistance-2","protein_coding"
"Solyc09g042290","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JXR5_CYNCS)","protein_coding"
"Solyc09g055180","No alias","Solanum lycopersicum","Leucine-rich repeat protein kinase family protein (AHRD V3.3 *-* AT5G01950.8)","protein_coding"
"Solyc09g055940","No alias","Solanum lycopersicum","Sodium Bile acid symporter family (AHRD V3.3 *** AT3G25410.1)","protein_coding"
"Solyc09g056160","No alias","Solanum lycopersicum","Chaperone surA (AHRD V3.3 *** A0A1D1YVG1_9ARAE)","protein_coding"
"Solyc09g064630","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT4G17940.1)","protein_coding"
"Solyc09g064720","No alias","Solanum lycopersicum","Endo-1,3-1,4-beta-d-glucanase, putative (AHRD V3.3 *** B9SFP3_RICCO)","protein_coding"
"Solyc09g066420","No alias","Solanum lycopersicum","TBC1 domain family protein","protein_coding"
"Solyc09g072680","No alias","Solanum lycopersicum","F-box associated interaction domain-containing protein (AHRD V3.3 *** A0A103XV28_CYNCS)","protein_coding"
"Solyc09g083110","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XDL5_CYNCS)","protein_coding"
"Solyc09g089640","No alias","Solanum lycopersicum","LOW QUALITY:Plant/T32M21-140 protein (AHRD V3.3 *** A0A072VGG8_MEDTR)","protein_coding"
"Solyc09g090070","No alias","Solanum lycopersicum","phosphate transporter 1","protein_coding"
"Solyc09g091050","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* AT5G04220.1)","protein_coding"
"Solyc09g091130","No alias","Solanum lycopersicum","Glutathione s-transferase, putative (AHRD V3.3 *** B9RWR5_RICCO)","protein_coding"
"Solyc09g091830","No alias","Solanum lycopersicum","plastid transcriptionally active 5 (AHRD V3.3 *** AT4G13670.1)","protein_coding"
"Solyc09g092050","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9GFV9_POPTR)","protein_coding"
"Solyc10g005790","No alias","Solanum lycopersicum","transmembrane protein C9orf5 protein (AHRD V3.3 *** AT5G55960.1)","protein_coding"
"Solyc10g006790","No alias","Solanum lycopersicum","mitogen-activated protein kinase 16 (AHRD V3.3 --* AT5G19010.1)","protein_coding"
"Solyc10g017640","No alias","Solanum lycopersicum","MADS-box transcription factor (AHRD V3.3 *-* G7L1F7_MEDTR)","protein_coding"
"Solyc10g018580","No alias","Solanum lycopersicum","LOW QUALITY:Ycf1 (AHRD V3.3 *-* A0A0U1ZK62_SOLHA)","protein_coding"
"Solyc10g018850","No alias","Solanum lycopersicum","Endo-1,3-1,4-beta-d-glucanase, putative (AHRD V3.3 *** B9SFP3_RICCO)","protein_coding"
"Solyc10g047960","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT5G65810.1)","protein_coding"
"Solyc10g051390","No alias","Solanum lycopersicum","RNA-binding glycine-rich protein (AHRD V3.3 *** D6PZY6_TOBAC)","protein_coding"
"Solyc10g052650","No alias","Solanum lycopersicum","F-box protein (AHRD V3.3 *-* A0A0B2RZB4_GLYSO)","protein_coding"
"Solyc10g062060","No alias","Solanum lycopersicum","Transport membrane protein (AHRD V3.3 *-* A0A0C5ARU2_HYONI)","protein_coding"
"Solyc10g076170","No alias","Solanum lycopersicum","LOW QUALITY:Protein kinase superfamily protein (AHRD V3.3 --* AT3G53930.5)","protein_coding"
"Solyc10g078920","No alias","Solanum lycopersicum","Thioredoxin (AHRD V3.3 *** G7KVF9_MEDTR)","protein_coding"
"Solyc10g083490","No alias","Solanum lycopersicum","Cell division protein ftsZ, putative (AHRD V3.3 *** B9SRX2_RICCO)","protein_coding"
"Solyc10g086620","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT5G06060.1),Pfam:PF13561","protein_coding"
"Solyc11g005660","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** U5FF83_POPTR)","protein_coding"
"Solyc11g006420","No alias","Solanum lycopersicum","Cytosolic 5-nucleotidase (AHRD V3.3 *** A0A059Q189_9POAL)","protein_coding"
"Solyc11g008050","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g008360","No alias","Solanum lycopersicum","pseudouridine synthase family protein (AHRD V3.3 *** AT2G39140.1)","protein_coding"
"Solyc11g010370","No alias","Solanum lycopersicum","ENTH/ANTH/VHS superfamily protein, putative (AHRD V3.3 *** A0A061DPV2_THECC)","protein_coding"
"Solyc11g010890","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 --* AT1G33400.2)","protein_coding"
"Solyc11g010900","No alias","Solanum lycopersicum","tRNA/rRNA methyltransferase family protein (AHRD V3.3 *** D7M9L1_ARALL)","protein_coding"
"Solyc11g010910","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT4G29860.1)","protein_coding"
"Solyc11g012890","No alias","Solanum lycopersicum","Auxin efflux carrier component (AHRD V3.3 --* A0A075IGY3_9SPER)","protein_coding"
"Solyc11g017250","No alias","Solanum lycopersicum","Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (AHRD V3.3 *** K4D6M8_SOLLC)","protein_coding"
"Solyc11g018720","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g020870","No alias","Solanum lycopersicum","Metal-dependent protein hydrolase (AHRD V3.3 *** AT5G41970.1)","protein_coding"
"Solyc11g028190","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g032040","No alias","Solanum lycopersicum","Transposon protein, putative, CACTA, En/Spm sub-class (AHRD V3.3 *-* Q7G3C6_ORYSJ)","protein_coding"
"Solyc11g062250","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XHJ0_CYNCS)","protein_coding"
"Solyc11g066600","No alias","Solanum lycopersicum","Lysosomal Pro-X carboxypeptidase, putative (AHRD V3.3 *** B9SCN3_RICCO)","protein_coding"
"Solyc11g068540","No alias","Solanum lycopersicum","beta-alanine synthase","protein_coding"
"Solyc11g069260","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** AT4G33460.1)","protein_coding"
"Solyc11g070160","No alias","Solanum lycopersicum","Sequence-specific DNA-binding transcription factor (AHRD V3.3 *** G7LDQ2_MEDTR)","protein_coding"
"Solyc11g071960","No alias","Solanum lycopersicum","Sulfhydryl oxidase (AHRD V3.3 *** K4DAQ3_SOLLC)","protein_coding"
"Solyc11g073130","No alias","Solanum lycopersicum","Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** K4DB19_SOLLC)","protein_coding"
"Solyc12g006290","No alias","Solanum lycopersicum","Reticulon-like protein (AHRD V3.3 *** M1CT78_SOLTU)","protein_coding"
"Solyc12g006440","No alias","Solanum lycopersicum","LOW QUALITY:3-isopropylmalate dehydratase large subunit (AHRD V3.3 *** A0A0B0MEL1_GOSAR)","protein_coding"
"Solyc12g009050","No alias","Solanum lycopersicum","Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR)","protein_coding"
"Solyc12g009180","No alias","Solanum lycopersicum","RmlC-like jelly roll fold protein (AHRD V3.3 *** AT1G19130.1)","protein_coding"
"Solyc12g009440","No alias","Solanum lycopersicum","Chaperone DnaJ (AHRD V3.3 *** A0A0B0P8V3_GOSAR)","protein_coding"
"Solyc12g009870","No alias","Solanum lycopersicum","LOW QUALITY:Leucine-rich repeat family protein (AHRD V3.3 *** AT1G15740.1)","protein_coding"
"Solyc12g009980","No alias","Solanum lycopersicum","UPF0133 protein (AHRD V3.3 *** A0A0B2RBJ9_GLYSO)","protein_coding"
"Solyc12g010180","No alias","Solanum lycopersicum","Anthranilate synthase (AHRD V3.3 *** A0A0K9PKR0_ZOSMR)","protein_coding"
"Solyc12g014190","No alias","Solanum lycopersicum","tRNA isopentenyltransferase (AHRD V3.3 *** A0A103Y4A0_CYNCS)","protein_coding"
"Solyc12g014290","No alias","Solanum lycopersicum","multiprotein bridging factor 1c","protein_coding"
"Solyc12g019890","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SHH6_RICCO)","protein_coding"
"Solyc12g035260","No alias","Solanum lycopersicum","LOW QUALITY:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 --* AT1G11100.5)","protein_coding"
"Solyc12g036410","No alias","Solanum lycopersicum","Elongation factor 1-alpha, putative (AHRD V3.3 *** B9SPP6_RICCO)","protein_coding"
"Solyc12g038480","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g042950","No alias","Solanum lycopersicum","Plastidic ATP/ADP-transporter (AHRD V3.3 *** TLC1_SOLTU)","protein_coding"
"Solyc12g077510","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g096660","No alias","Solanum lycopersicum","Type II inositol 5-phosphatase, putative (AHRD V3.3 *** B9RM01_RICCO)","protein_coding"
"Solyc12g098990","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZZ6_RICCO)","protein_coding"
"Solyc12g099920","No alias","Solanum lycopersicum","Required to maintain repression 2 (AHRD V3.3 *-* I6XGM5_MAIZE)","protein_coding"
"Solyc12g100310","No alias","Solanum lycopersicum","Protein kinase family protein (AHRD V3.3 *** AT3G13670.1)","protein_coding"
"Sopen03g038850","No alias","Solanum pennellii","TLC ATP/ADP transporter","protein_coding"
"Sopen06g015650","No alias","Solanum pennellii","TLC ATP/ADP transporter","protein_coding"
"Sopen12g022130","No alias","Solanum pennellii","TLC ATP/ADP transporter","protein_coding"