"sequence_id","alias","species","description","type"
"100054","No alias","Selaginella moellendorffii ","Nucleotidyltransferase family protein","protein_coding"
"100512","No alias","Selaginella moellendorffii ","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"104121","No alias","Selaginella moellendorffii ","RNA polymerase Rpb8","protein_coding"
"107792","No alias","Selaginella moellendorffii ","DDT domain-containing protein","protein_coding"
"109371","No alias","Selaginella moellendorffii ","NADH:ubiquinone oxidoreductase intermediate-associated protein 30","protein_coding"
"109677","No alias","Selaginella moellendorffii ","S-domain-2 5","protein_coding"
"110102","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"126219","No alias","Selaginella moellendorffii ","tubulin-tyrosine ligases;tubulin-tyrosine ligases","protein_coding"
"126756","No alias","Selaginella moellendorffii ","embryo sac development arrest 7","protein_coding"
"137407","No alias","Selaginella moellendorffii ","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding"
"144057","No alias","Selaginella moellendorffii ","phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding"
"146904","No alias","Selaginella moellendorffii ","Transmembrane CLPTM1 family protein","protein_coding"
"150191","No alias","Selaginella moellendorffii ","RNA-dependent RNA polymerase 1","protein_coding"
"154896","No alias","Selaginella moellendorffii ","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"157789","No alias","Selaginella moellendorffii ","Sec23/Sec24 protein transport family protein","protein_coding"
"162920","No alias","Selaginella moellendorffii ","calmodulin-binding protein","protein_coding"
"168576","No alias","Selaginella moellendorffii ","lipoxygenase 3","protein_coding"
"170784","No alias","Selaginella moellendorffii ","C2 domain-containing protein","protein_coding"
"174598","No alias","Selaginella moellendorffii ","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"2133","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 25","protein_coding"
"228167","No alias","Selaginella moellendorffii ","shrunken seed protein (SSE1)","protein_coding"
"23058","No alias","Selaginella moellendorffii ","phosphatidylserine decarboxylase 1","protein_coding"
"233033","No alias","Selaginella moellendorffii ","acyl-CoA dehydrogenase-related","protein_coding"
"235915","No alias","Selaginella moellendorffii ","cinnamyl alcohol dehydrogenase 9","protein_coding"
"266556","No alias","Selaginella moellendorffii ","importin alpha isoform 1","protein_coding"
"270709","No alias","Selaginella moellendorffii ","MATE efflux family protein","protein_coding"
"32458","No alias","Selaginella moellendorffii ","glucuronidase 3","protein_coding"
"35818","No alias","Selaginella moellendorffii ","phloem protein 2-A15","protein_coding"
"36361","No alias","Selaginella moellendorffii ","Nodulin MtN3 family protein","protein_coding"
"36529","No alias","Selaginella moellendorffii ","ubiquitin-conjugating enzyme 33","protein_coding"
"402807","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403080","No alias","Selaginella moellendorffii ","myb-like HTH transcriptional regulator family protein","protein_coding"
"403355","No alias","Selaginella moellendorffii ","Sterile alpha motif (SAM) domain-containing protein","protein_coding"
"403831","No alias","Selaginella moellendorffii ","Plant protein of unknown function (DUF827)","protein_coding"
"40493","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"406456","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407400","No alias","Selaginella moellendorffii ","dicer-like 2","protein_coding"
"409770","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"410445","No alias","Selaginella moellendorffii ","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"410641","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411205","No alias","Selaginella moellendorffii ","DDT domain superfamily","protein_coding"
"413396","No alias","Selaginella moellendorffii ","Disease resistance-responsive (dirigent-like protein) family protein","protein_coding"
"413650","No alias","Selaginella moellendorffii ","beta-galactosidase 8","protein_coding"
"414166","No alias","Selaginella moellendorffii ","DNA ligase IV","protein_coding"
"416855","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419947","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421388","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423938","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424109","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424114","No alias","Selaginella moellendorffii ","auxin response factor 6","protein_coding"
"424802","No alias","Selaginella moellendorffii ","Helicase/SANT-associated, DNA binding protein","protein_coding"
"428314","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"428704","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"430855","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"431176","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437689","No alias","Selaginella moellendorffii ","zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein","protein_coding"
"438035","No alias","Selaginella moellendorffii ","SAC3/GANP/Nin1/mts3/eIF-3 p25 family","protein_coding"
"439354","No alias","Selaginella moellendorffii ","Peptidase M1 family protein","protein_coding"
"439695","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF2361)","protein_coding"
"440990","No alias","Selaginella moellendorffii ","formate dehydrogenase","protein_coding"
"442281","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"442417","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"442740","No alias","Selaginella moellendorffii ","Nucleotidyltransferase family protein","protein_coding"
"444016","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"444765","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"447644","No alias","Selaginella moellendorffii ","Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein","protein_coding"
"448595","No alias","Selaginella moellendorffii ","Cleavage and polyadenylation specificity factor (CPSF) A subunit protein","protein_coding"
"448813","No alias","Selaginella moellendorffii ","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"46144","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"462","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"58739","No alias","Selaginella moellendorffii ","Mitochondrial transcription termination factor family protein","protein_coding"
"60640","No alias","Selaginella moellendorffii ","histone acetyltransferase of the CBP family 1","protein_coding"
"61383","No alias","Selaginella moellendorffii ","non-intrinsic ABC protein 8","protein_coding"
"69085","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"72303","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"73379","No alias","Selaginella moellendorffii ","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"77235","No alias","Selaginella moellendorffii ","Protein of unknown function, DUF647","protein_coding"
"77443","No alias","Selaginella moellendorffii ","RNA polymerases M/15 Kd subunit","protein_coding"
"80448","No alias","Selaginella moellendorffii ","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"80459","No alias","Selaginella moellendorffii ","Calcium-binding EF hand family protein","protein_coding"
"80477","No alias","Selaginella moellendorffii ","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"82341","No alias","Selaginella moellendorffii ","Pyridoxamine 5\'-phosphate oxidase family protein","protein_coding"
"88328","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"89017","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"89300","No alias","Selaginella moellendorffii ","Metallopeptidase M24 family protein","protein_coding"
"90004","No alias","Selaginella moellendorffii ","Uncharacterized protein","protein_coding"
"91162","No alias","Selaginella moellendorffii ","CLP protease proteolytic subunit 2","protein_coding"
"91564","No alias","Selaginella moellendorffii ","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"92509","No alias","Selaginella moellendorffii ","armadillo repeat kinesin 3","protein_coding"
"94367","No alias","Selaginella moellendorffii ","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"96808","No alias","Selaginella moellendorffii ","DNA LIGASE 6","protein_coding"
"97017","No alias","Selaginella moellendorffii ","dual specificity protein phosphatase-related","protein_coding"
"97073","No alias","Selaginella moellendorffii ","DNA ligase 1","protein_coding"
"98426","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"99227","No alias","Selaginella moellendorffii ","Argonaute family protein","protein_coding"
"99292","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"99518","No alias","Selaginella moellendorffii ","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"A4A49_08255","No alias","Nicotiana attenuata","dna ligase 4","protein_coding"
"A4A49_15784","No alias","Nicotiana attenuata","dna ligase 6","protein_coding"
"A4A49_37171","No alias","Nicotiana attenuata","dna ligase 1","protein_coding"
"A4A49_42047","No alias","Nicotiana attenuata","dna ligase 6","protein_coding"
"A4A49_65631","No alias","Nicotiana attenuata","dna ligase 6","protein_coding"
"AC177908.3_FG002","No alias","Zea mays","galacturonosyltransferase 11","protein_coding"
"AC233883.1_FG006","No alias","Zea mays","Plant protein of unknown function (DUF247)","protein_coding"
"At1g01220","No alias","Arabidopsis thaliana","Bifunctional fucokinase/fucose pyrophosphorylase [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ9]","protein_coding"
"At1g01780","No alias","Arabidopsis thaliana","LIM domain-containing protein PLIM2b [Source:UniProtKB/Swiss-Prot;Acc:Q1ECF5]","protein_coding"
"At1g02580","No alias","Arabidopsis thaliana","Histone-lysine N-methyltransferase MEDEA [Source:UniProtKB/Swiss-Prot;Acc:O65312]","protein_coding"
"At1g03360","No alias","Arabidopsis thaliana","RRP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W3N1]","protein_coding"
"At1g04150","No alias","Arabidopsis thaliana","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:O64492]","protein_coding"
"At1g06260","No alias","Arabidopsis thaliana","Cysteine proteinases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LNC1]","protein_coding"
"At1g06490","No alias","Arabidopsis thaliana","Callose synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ3]","protein_coding"
"At1g07340","No alias","Arabidopsis thaliana","STP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W5X1]","protein_coding"
"At1g07370","No alias","Arabidopsis thaliana","Proliferating cellular nuclear antigen 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q7]","protein_coding"
"At1g07460","No alias","Arabidopsis thaliana","Concanavalin A-like lectin family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNW6]","protein_coding"
"At1g07690","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Orthoreovirus membrane fusion p10 (InterPro:IPR009854); BEST Arabidopsis thaliana pro /.../atch is: unknown protein (TAIR:AT1G54950.1); Has 11 Blast hits to 11 proteins in 4 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT1G07690]","protein_coding"
"At1g08130","No alias","Arabidopsis thaliana","DNA ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42572]","protein_coding"
"At1g08580","No alias","Arabidopsis thaliana","At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]","protein_coding"
"At1g09380","No alias","Arabidopsis thaliana","WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]","protein_coding"
"At1g10010","No alias","Arabidopsis thaliana","amino acid permease 8 [Source:TAIR;Acc:AT1G10010]","protein_coding"
"At1g10180","No alias","Arabidopsis thaliana","Exocyst complex component EXO84C [Source:UniProtKB/Swiss-Prot;Acc:Q9SY60]","protein_coding"
"At1g10490","No alias","Arabidopsis thaliana","RNA cytidine acetyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIK4]","protein_coding"
"At1g12070","No alias","Arabidopsis thaliana","At1g12070 [Source:UniProtKB/TrEMBL;Acc:O65371]","protein_coding"
"At1g12750","No alias","Arabidopsis thaliana","RHOMBOID-like protein 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ48]","protein_coding"
"At1g13050","No alias","Arabidopsis thaliana","F3F19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SAE0]","protein_coding"
"At1g15640","No alias","Arabidopsis thaliana","T16N11.15 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9D1]","protein_coding"
"At1g16130","No alias","Arabidopsis thaliana","Wall-associated receptor kinase-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7X8C5]","protein_coding"
"At1g17450","No alias","Arabidopsis thaliana","B-block binding subunit of TFIIIC [Source:UniProtKB/TrEMBL;Acc:F4I7J9]","protein_coding"
"At1g18850","No alias","Arabidopsis thaliana","F6A14.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9V4]","protein_coding"
"At1g19230","No alias","Arabidopsis thaliana","Respiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]","protein_coding"
"At1g20150","No alias","Arabidopsis thaliana","Subtilisin-like protease SBT5.1 [Source:UniProtKB/Swiss-Prot;Acc:F4HSQ2]","protein_coding"
"At1g20860","No alias","Arabidopsis thaliana","phosphate transporter 1;8 [Source:TAIR;Acc:AT1G20860]","protein_coding"
"At1g21560","No alias","Arabidopsis thaliana","F14J8.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPK4]","protein_coding"
"At1g22460","No alias","Arabidopsis thaliana","O-fucosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:B7ZWR7]","protein_coding"
"At1g22760","No alias","Arabidopsis thaliana","Polyadenylate-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64380]","protein_coding"
"At1g23000","No alias","Arabidopsis thaliana","Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]","protein_coding"
"At1g24180","No alias","Arabidopsis thaliana","Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]","protein_coding"
"At1g24390","No alias","Arabidopsis thaliana","unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT1G24390]","protein_coding"
"At1g26260","No alias","Arabidopsis thaliana","Transcription factor bHLH76 [Source:UniProtKB/Swiss-Prot;Acc:Q9C670]","protein_coding"
"At1g27040","No alias","Arabidopsis thaliana","Protein NRT1/ PTR FAMILY 4.5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYE4]","protein_coding"
"At1g28270","No alias","Arabidopsis thaliana","Protein RALF-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZA0]","protein_coding"
"At1g29880","No alias","Arabidopsis thaliana","Glycine--tRNA ligase, mitochondrial 1 [Source:UniProtKB/Swiss-Prot;Acc:O23627]","protein_coding"
"At1g30220","No alias","Arabidopsis thaliana","Probable inositol transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C757]","protein_coding"
"At1g31380","No alias","Arabidopsis thaliana","TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9C871]","protein_coding"
"At1g32770","No alias","Arabidopsis thaliana","NAC domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPI7]","protein_coding"
"At1g33220","No alias","Arabidopsis thaliana","Beta-1,3-glucanase, putative [Source:UniProtKB/TrEMBL;Acc:Q9LP27]","protein_coding"
"At1g35880","No alias","Arabidopsis thaliana","Uncharacterized protein F10O5.5 [Source:UniProtKB/TrEMBL;Acc:Q9C8B6]","protein_coding"
"At1g43040","No alias","Arabidopsis thaliana","SAUR-like auxin-responsive protein family [Source:TAIR;Acc:AT1G43040]","protein_coding"
"At1g43610","No alias","Arabidopsis thaliana","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q3ECX9]","protein_coding"
"At1g47570","No alias","Arabidopsis thaliana","At1g47570 [Source:UniProtKB/TrEMBL;Acc:Q6NL06]","protein_coding"
"At1g47680","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast hits to 3 proteins in 1  /.../s: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT1G47680]","protein_coding"
"At1g48830","No alias","Arabidopsis thaliana","40S ribosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF0]","protein_coding"
"At1g48920","No alias","Arabidopsis thaliana","Nucleolin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ1]","protein_coding"
"At1g49250","No alias","Arabidopsis thaliana","DNA ligase [Source:UniProtKB/TrEMBL;Acc:F4I1P7]","protein_coding"
"At1g51460","No alias","Arabidopsis thaliana","ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]","protein_coding"
"At1g52100","No alias","Arabidopsis thaliana","Mannose-binding lectin superfamily protein [Source:TAIR;Acc:AT1G52100]","protein_coding"
"At1g52930","No alias","Arabidopsis thaliana","Ribosome biogenesis protein BRX1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C928]","protein_coding"
"At1g52950","No alias","Arabidopsis thaliana","Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C926]","protein_coding"
"At1g54260","No alias","Arabidopsis thaliana","Winged-helix DNA-binding transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4HV94]","protein_coding"
"At1g54610","No alias","Arabidopsis thaliana","Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]","protein_coding"
"At1g54690","No alias","Arabidopsis thaliana","Probable histone H2AXb [Source:UniProtKB/Swiss-Prot;Acc:Q9S9K7]","protein_coding"
"At1g54960","No alias","Arabidopsis thaliana","NP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WKE3]","protein_coding"
"At1g55550","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-14T [Source:UniProtKB/Swiss-Prot;Acc:F4I1T9]","protein_coding"
"At1g55580","No alias","Arabidopsis thaliana","SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]","protein_coding"
"At1g56110","No alias","Arabidopsis thaliana","At1g56110/T6H22_9 [Source:UniProtKB/TrEMBL;Acc:Q9SGT7]","protein_coding"
"At1g57820","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase ORTHRUS 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYZ0]","protein_coding"
"At1g58120","No alias","Arabidopsis thaliana","Uncharacterized protein At1g58120/68103_m00121 [Source:UniProtKB/TrEMBL;Acc:Q9C6F6]","protein_coding"
"At1g60610","No alias","Arabidopsis thaliana","At1g60610 [Source:UniProtKB/TrEMBL;Acc:Q4TU35]","protein_coding"
"At1g62130","No alias","Arabidopsis thaliana","AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HX45]","protein_coding"
"At1g63200","No alias","Arabidopsis thaliana","Cystatin/monellin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAM3]","protein_coding"
"At1g63660","No alias","Arabidopsis thaliana","At1g63660 [Source:UniProtKB/TrEMBL;Acc:Q9CAD1]","protein_coding"
"At1g63810","No alias","Arabidopsis thaliana","Nucleolar protein [Source:UniProtKB/TrEMBL;Acc:Q0WVM5]","protein_coding"
"At1g64070","No alias","Arabidopsis thaliana","Disease resistance protein RML1A [Source:UniProtKB/Swiss-Prot;Acc:F4I594]","protein_coding"
"At1g64810","No alias","Arabidopsis thaliana","APO RNA-binding protein (DUF794) [Source:UniProtKB/TrEMBL;Acc:F4I896]","protein_coding"
"At1g64880","No alias","Arabidopsis thaliana","At1g64880 [Source:UniProtKB/TrEMBL;Acc:Q6GKU7]","protein_coding"
"At1g66570","No alias","Arabidopsis thaliana","Sucrose transport protein SUC7 [Source:UniProtKB/Swiss-Prot;Acc:Q67YF8]","protein_coding"
"At1g66730","No alias","Arabidopsis thaliana","DNA ligase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HPZ9]","protein_coding"
"At1g67120","No alias","Arabidopsis thaliana","ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding [Source:TAIR;Acc:AT1G67120]","protein_coding"
"At1g67180","No alias","Arabidopsis thaliana","F5A8.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW89]","protein_coding"
"At1g67320","No alias","Arabidopsis thaliana","DNA primase large subunit [Source:UniProtKB/TrEMBL;Acc:F4HRU9]","protein_coding"
"At1g67500","No alias","Arabidopsis thaliana","recovery protein 3 [Source:TAIR;Acc:AT1G67500]","protein_coding"
"At1g69200","No alias","Arabidopsis thaliana","Fructokinase-like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I0K2]","protein_coding"
"At1g69320","No alias","Arabidopsis thaliana","CLE10 [Source:UniProtKB/TrEMBL;Acc:A0A178WI24]","protein_coding"
"At1g70170","No alias","Arabidopsis thaliana","Metalloendoproteinase 2-MMP [Source:UniProtKB/Swiss-Prot;Acc:O04529]","protein_coding"
"At1g71120","No alias","Arabidopsis thaliana","GLIP6 [Source:UniProtKB/TrEMBL;Acc:A0A178WCW6]","protein_coding"
"At1g73360","No alias","Arabidopsis thaliana","Homeobox-leucine zipper protein HDG11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX31]","protein_coding"
"At1g73620","No alias","Arabidopsis thaliana","Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9U9]","protein_coding"
"At1g74260","No alias","Arabidopsis thaliana","Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M8D3]","protein_coding"
"At1g77470","No alias","Arabidopsis thaliana","Replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAQ8]","protein_coding"
"At1g77550","No alias","Arabidopsis thaliana","At1g77550 [Source:UniProtKB/TrEMBL;Acc:Q6IDC7]","protein_coding"
"At1g78280","No alias","Arabidopsis thaliana","F-box protein At1g78280 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E8]","protein_coding"
"At1g78310","No alias","Arabidopsis thaliana","VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]","protein_coding"
"At1g80270","No alias","Arabidopsis thaliana","PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]","protein_coding"
"At1g80330","No alias","Arabidopsis thaliana","Gibberellin 3-beta-dioxygenase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C971]","protein_coding"
"At2g01250","No alias","Arabidopsis thaliana","60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]","protein_coding"
"At2g02440","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVP9]","protein_coding"
"At2g05900","No alias","Arabidopsis thaliana","Putative inactive histone-lysine N-methyltransferase family member SUVH10 [Source:UniProtKB/Swiss-Prot;Acc:Q3EC60]","protein_coding"
"At2g11010","No alias","Arabidopsis thaliana","Uncharacterized protein At2g11010 [Source:UniProtKB/TrEMBL;Acc:Q9SKH6]","protein_coding"
"At2g15690","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQE5]","protein_coding"
"At2g16440","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVF5]","protein_coding"
"At2g18220","No alias","Arabidopsis thaliana","Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPV5]","protein_coding"
"At2g18330","No alias","Arabidopsis thaliana","AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]","protein_coding"
"At2g19500","No alias","Arabidopsis thaliana","Cytokinin dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUJ3]","protein_coding"
"At2g20880","No alias","Arabidopsis thaliana","Ethylene-responsive transcription factor ERF053 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKT1]","protein_coding"
"At2g21380","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-7M, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJU0]","protein_coding"
"At2g21550","No alias","Arabidopsis thaliana","Bifunctional dihydrofolate reductase-thymidylate synthase [Source:UniProtKB/TrEMBL;Acc:Q9SIK4]","protein_coding"
"At2g21790","No alias","Arabidopsis thaliana","Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ20]","protein_coding"
"At2g23030","No alias","Arabidopsis thaliana","SNRK2.9 [Source:UniProtKB/TrEMBL;Acc:A0A178VSC8]","protein_coding"
"At2g24350","No alias","Arabidopsis thaliana","At2g24350 [Source:UniProtKB/TrEMBL;Acc:Q0WPW8]","protein_coding"
"At2g24560","No alias","Arabidopsis thaliana","GDSL esterase/lipase At2g24560 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA9]","protein_coding"
"At2g27450","No alias","Arabidopsis thaliana","N-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]","protein_coding"
"At2g27750","No alias","Arabidopsis thaliana","Nucleolar matrix protein-related [Source:UniProtKB/TrEMBL;Acc:Q9ZUX6]","protein_coding"
"At2g29820","No alias","Arabidopsis thaliana","Putative F-box/kelch-repeat protein At2g29820 [Source:UniProtKB/Swiss-Prot;Acc:O82374]","protein_coding"
"At2g30100","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WNN7]","protein_coding"
"At2g31550","No alias","Arabidopsis thaliana","SGNH hydrolase-type esterase superfamily protein [Source:TAIR;Acc:AT2G31550]","protein_coding"
"At2g32910","No alias","Arabidopsis thaliana","DCD (Development and Cell Death) domain protein [Source:UniProtKB/TrEMBL;Acc:F4IUS3]","protein_coding"
"At2g33730","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 21 [Source:UniProtKB/Swiss-Prot;Acc:P93008]","protein_coding"
"At2g33880","No alias","Arabidopsis thaliana","WOX9A [Source:UniProtKB/TrEMBL;Acc:A0A178VQA8]","protein_coding"
"At2g34260","No alias","Arabidopsis thaliana","WD repeat-containing protein 55 [Source:UniProtKB/Swiss-Prot;Acc:O80775]","protein_coding"
"At2g34480","No alias","Arabidopsis thaliana","Ribosomal protein L18ae/LX family protein [Source:TAIR;Acc:AT2G34480]","protein_coding"
"At2g35550","No alias","Arabidopsis thaliana","BPC7 [Source:UniProtKB/TrEMBL;Acc:A0A178W000]","protein_coding"
"At2g36620","No alias","Arabidopsis thaliana","60S ribosomal protein L24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42347]","protein_coding"
"At2g38910","No alias","Arabidopsis thaliana","CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]","protein_coding"
"At2g40210","No alias","Arabidopsis thaliana","AGL48 [Source:UniProtKB/TrEMBL;Acc:A0A178VQF2]","protein_coding"
"At2g40550","No alias","Arabidopsis thaliana","Mini-chromosome maintenance complex-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q501D5]","protein_coding"
"At2g40630","No alias","Arabidopsis thaliana","At2g40630/T2P4.2 [Source:UniProtKB/TrEMBL;Acc:Q94EI6]","protein_coding"
"At2g41300","No alias","Arabidopsis thaliana","Protein STRICTOSIDINE SYNTHASE-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IJZ6]","protein_coding"
"At2g41950","No alias","Arabidopsis thaliana","At2g41950/T6D20.26 [Source:UniProtKB/TrEMBL;Acc:O23684]","protein_coding"
"At2g44240","No alias","Arabidopsis thaliana","At2g44240/F4I1.5 [Source:UniProtKB/TrEMBL;Acc:O64859]","protein_coding"
"At2g44690","No alias","Arabidopsis thaliana","ROP8 [Source:UniProtKB/TrEMBL;Acc:A0A178VUK9]","protein_coding"
"At2g45610","No alias","Arabidopsis thaliana","Probable carboxylesterase 9 [Source:UniProtKB/Swiss-Prot;Acc:O64641]","protein_coding"
"At2g45750","No alias","Arabidopsis thaliana","Probable methyltransferase PMT16 [Source:UniProtKB/Swiss-Prot;Acc:O80844]","protein_coding"
"At2g46870","No alias","Arabidopsis thaliana","B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]","protein_coding"
"At3g01730","No alias","Arabidopsis thaliana","F28J7.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9S7S5]","protein_coding"
"At3g03060","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]","protein_coding"
"At3g03110","No alias","Arabidopsis thaliana","Protein EXPORTIN 1B [Source:UniProtKB/Swiss-Prot;Acc:F4IZR5]","protein_coding"
"At3g03920","No alias","Arabidopsis thaliana","Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT0]","protein_coding"
"At3g03960","No alias","Arabidopsis thaliana","T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]","protein_coding"
"At3g04700","No alias","Arabidopsis thaliana","At3g04700 [Source:UniProtKB/TrEMBL;Acc:Q9SR04]","protein_coding"
"At3g06530","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP28]","protein_coding"
"At3g06600","No alias","Arabidopsis thaliana","Protein SINE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C900]","protein_coding"
"At3g07770","No alias","Arabidopsis thaliana","Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]","protein_coding"
"At3g07900","No alias","Arabidopsis thaliana","O-fucosyltransferase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFC4]","protein_coding"
"At3g10530","No alias","Arabidopsis thaliana","F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]","protein_coding"
"At3g11040","No alias","Arabidopsis thaliana","Glycosyl hydrolase family 85 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS8]","protein_coding"
"At3g11964","No alias","Arabidopsis thaliana","rRNA biogenesis protein RRP5 [Source:UniProtKB/Swiss-Prot;Acc:F4J8K6]","protein_coding"
"At3g12200","No alias","Arabidopsis thaliana","NIMA-related kinase 7 [Source:UniProtKB/TrEMBL;Acc:F4J8P0]","protein_coding"
"At3g12550","No alias","Arabidopsis thaliana","Factor of DNA methylation 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHB1]","protein_coding"
"At3g12720","No alias","Arabidopsis thaliana","AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2]","protein_coding"
"At3g13840","No alias","Arabidopsis thaliana","Scarecrow-like protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRW3]","protein_coding"
"At3g13860","No alias","Arabidopsis thaliana","Chaperonin CPN60-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93ZM7]","protein_coding"
"At3g14520","No alias","Arabidopsis thaliana","Terpenoid synthase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUE2]","protein_coding"
"At3g15080","No alias","Arabidopsis thaliana","At3g15080 [Source:UniProtKB/TrEMBL;Acc:Q8LAA0]","protein_coding"
"At3g15970","No alias","Arabidopsis thaliana","Nuclear pore complex protein NUP50B [Source:UniProtKB/Swiss-Prot;Acc:Q9LW88]","protein_coding"
"At3g16160","No alias","Arabidopsis thaliana","Protein tesmin/TSO1-like CXC 8 [Source:UniProtKB/Swiss-Prot;Acc:Q700D0]","protein_coding"
"At3g17830","No alias","Arabidopsis thaliana","At3g17830 [Source:UniProtKB/TrEMBL;Acc:Q058J9]","protein_coding"
"At3g19940","No alias","Arabidopsis thaliana","Sugar transport protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT15]","protein_coding"
"At3g21400","No alias","Arabidopsis thaliana","Dynein beta chain, ciliary protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF6]","protein_coding"
"At3g21860","No alias","Arabidopsis thaliana","SKP1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSX8]","protein_coding"
"At3g22760","No alias","Arabidopsis thaliana","Protein tesmin/TSO1-like CXC 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L548]","protein_coding"
"At3g23390","No alias","Arabidopsis thaliana","60S ribosomal protein L36a [Source:UniProtKB/Swiss-Prot;Acc:O23290]","protein_coding"
"At3g23960","No alias","Arabidopsis thaliana","Putative F-box protein At3g23960 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIR1]","protein_coding"
"At3g25230","No alias","Arabidopsis thaliana","Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]","protein_coding"
"At3g25720","No alias","Arabidopsis thaliana","RNA-directed DNA polymerase (Reverse transcriptase)-related family protein [Source:UniProtKB/TrEMBL;Acc:Q3EB05]","protein_coding"
"At3g26190","No alias","Arabidopsis thaliana","Cytochrome P450 71B21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTM2]","protein_coding"
"At3g27570","No alias","Arabidopsis thaliana","Sucrase/ferredoxin-like family protein [Source:UniProtKB/TrEMBL;Acc:F4IWK4]","protein_coding"
"At3g27870","No alias","Arabidopsis thaliana","Probable phospholipid-transporting ATPase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK90]","protein_coding"
"At3g27930","No alias","Arabidopsis thaliana","AT3g27930/K24A2_2 [Source:UniProtKB/TrEMBL;Acc:Q8W106]","protein_coding"
"At3g28380","No alias","Arabidopsis thaliana","ABC transporter B family member 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSJ6]","protein_coding"
"At3g30280","No alias","Arabidopsis thaliana","Acetyl-CoA:benzylalcohol acetyltranferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LI71]","protein_coding"
"At3g32090","No alias","Arabidopsis thaliana","WRKY family transcription factor [Source:UniProtKB/TrEMBL;Acc:F4JA74]","protein_coding"
"At3g44070","No alias","Arabidopsis thaliana","Glycosyl hydrolase family 35 protein [Source:UniProtKB/TrEMBL;Acc:Q9LXQ5]","protein_coding"
"At3g44750","No alias","Arabidopsis thaliana","Histone deacetylase HDT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVE6]","protein_coding"
"At3g47140","No alias","Arabidopsis thaliana","F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD59]","protein_coding"
"At3g47370","No alias","Arabidopsis thaliana","40S ribosomal protein S20-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STY6]","protein_coding"
"At3g47520","No alias","Arabidopsis thaliana","Malate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SN86]","protein_coding"
"At3g48120","No alias","Arabidopsis thaliana","At3g48120 [Source:UniProtKB/TrEMBL;Acc:Q6NQC3]","protein_coding"
"At3g49150","No alias","Arabidopsis thaliana","F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT3G49150]","protein_coding"
"At3g49480","No alias","Arabidopsis thaliana","Putative F-box/FBD/LRR-repeat protein At3g49480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA04]","protein_coding"
"At3g49700","No alias","Arabidopsis thaliana","1-aminocyclopropane-1-carboxylate synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Y8]","protein_coding"
"At3g50720","No alias","Arabidopsis thaliana","Protein kinase ATN1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SCQ4]","protein_coding"
"At3g52700","No alias","Arabidopsis thaliana","unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT3G52700]","protein_coding"
"At3g52820","No alias","Arabidopsis thaliana","Purple acid phosphatase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q8S340]","protein_coding"
"At3g53020","No alias","Arabidopsis thaliana","60S ribosomal protein L24-2 [Source:UniProtKB/Swiss-Prot;Acc:P38666]","protein_coding"
"At3g53160","No alias","Arabidopsis thaliana","Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q326]","protein_coding"
"At3g55010","No alias","Arabidopsis thaliana","Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q05728]","protein_coding"
"At3g55510","No alias","Arabidopsis thaliana","Noc2p family [Source:UniProtKB/TrEMBL;Acc:Q0WVH0]","protein_coding"
"At3g56960","No alias","Arabidopsis thaliana","Phosphatidylinositol 4-phosphate 5-kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1K2]","protein_coding"
"At3g62140","No alias","Arabidopsis thaliana","NEFA-interacting nuclear protein [Source:UniProtKB/TrEMBL;Acc:Q5XV94]","protein_coding"
"At4g00910","No alias","Arabidopsis thaliana","Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]","protein_coding"
"At4g02060","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM7 [Source:UniProtKB/Swiss-Prot;Acc:P43299]","protein_coding"
"At4g02790","No alias","Arabidopsis thaliana","DAR GTPase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F6]","protein_coding"
"At4g08350","No alias","Arabidopsis thaliana","Putative transcription elongation factor SPT5 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STN3]","protein_coding"
"At4g08370","No alias","Arabidopsis thaliana","Extensin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9STN1]","protein_coding"
"At4g10480","No alias","Arabidopsis thaliana","Putative alpha NAC [Source:UniProtKB/TrEMBL;Acc:Q0WWN5]","protein_coding"
"At4g13630","No alias","Arabidopsis thaliana","Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]","protein_coding"
"At4g13880","No alias","Arabidopsis thaliana","Function unknown","protein_coding"
"At4g14280","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1PE83]","protein_coding"
"At4g15370","No alias","Arabidopsis thaliana","Baruol synthase [Source:UniProtKB/Swiss-Prot;Acc:O23390]","protein_coding"
"At4g16090","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45930.1); Has 76 Blast hits to 76 proteins in 2 spec /.../rchae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G16090]","protein_coding"
"At4g18465","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Source:UniProtKB/Swiss-Prot;Acc:F4JRJ6]","protein_coding"
"At4g18500","No alias","Arabidopsis thaliana","Uncharacterized protein AT4g18500 [Source:UniProtKB/TrEMBL;Acc:O49518]","protein_coding"
"At4g19240","No alias","Arabidopsis thaliana","Uncharacterized protein AT4g19240 [Source:UniProtKB/TrEMBL;Acc:O49681]","protein_coding"
"At4g20230","No alias","Arabidopsis thaliana","Terpenoid cyclases/Protein prenyltransferases superfamily protein [Source:TAIR;Acc:AT4G20230]","protein_coding"
"At4g21500","No alias","Arabidopsis thaliana","At4g21500 [Source:UniProtKB/TrEMBL;Acc:O65415]","protein_coding"
"At4g22130","No alias","Arabidopsis thaliana","SRF8 [Source:UniProtKB/TrEMBL;Acc:A0A178V0K9]","protein_coding"
"At4g22400","No alias","Arabidopsis thaliana","At4g22400 [Source:UniProtKB/TrEMBL;Acc:Q9SUX9]","protein_coding"
"At4g25340","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]","protein_coding"
"At4g27980","No alias","Arabidopsis thaliana","Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT4G27980]","protein_coding"
"At4g29180","No alias","Arabidopsis thaliana","RHS16 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M3]","protein_coding"
"At4g29250","No alias","Arabidopsis thaliana","HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JMX1]","protein_coding"
"At4g29410","No alias","Arabidopsis thaliana","60S ribosomal protein L28-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0E2]","protein_coding"
"At4g29630","No alias","Arabidopsis thaliana","Cytidine deaminase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S847]","protein_coding"
"At4g31210","No alias","Arabidopsis thaliana","DNA topoisomerase, type IA, core [Source:UniProtKB/TrEMBL;Acc:F4JRX3]","protein_coding"
"At4g31700","No alias","Arabidopsis thaliana","40S ribosomal protein S6-1 [Source:UniProtKB/Swiss-Prot;Acc:O48549]","protein_coding"
"At4g35280","No alias","Arabidopsis thaliana","DAZ2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT4]","protein_coding"
"At4g36550","No alias","Arabidopsis thaliana","U-box domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:O23225]","protein_coding"
"At4g37130","No alias","Arabidopsis thaliana","Nuclear pore complex protein NUP58 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWH9]","protein_coding"
"At4g39280","No alias","Arabidopsis thaliana","Phenylalanine--tRNA ligase alpha subunit, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9T034]","protein_coding"
"At5g01560","No alias","Arabidopsis thaliana","Lectin-domain containing receptor kinase VI.4 [Source:UniProtKB/Swiss-Prot;Acc:Q66GN2]","protein_coding"
"At5g02430","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ59]","protein_coding"
"At5g03650","No alias","Arabidopsis thaliana","1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]","protein_coding"
"At5g04500","No alias","Arabidopsis thaliana","Glycosyltransferase family protein 64 protein C5 [Source:UniProtKB/Swiss-Prot;Acc:Q84WB7]","protein_coding"
"At5g05640","No alias","Arabidopsis thaliana","At5g05640 [Source:UniProtKB/TrEMBL;Acc:Q9FFL0]","protein_coding"
"At5g07560","No alias","Arabidopsis thaliana","GRP20 [Source:UniProtKB/TrEMBL;Acc:A0A178UJU8]","protein_coding"
"At5g08010","No alias","Arabidopsis thaliana","Uncharacterized protein F13G24.210 [Source:UniProtKB/TrEMBL;Acc:Q9SD83]","protein_coding"
"At5g08570","No alias","Arabidopsis thaliana","Pyruvate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UBM6]","protein_coding"
"At5g09460","No alias","Arabidopsis thaliana","Transcription factor bHLH143 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY69]","protein_coding"
"At5g09810","No alias","Arabidopsis thaliana","AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]","protein_coding"
"At5g10440","No alias","Arabidopsis thaliana","Cyclin-D4-2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQN9]","protein_coding"
"At5g10510","No alias","Arabidopsis thaliana","AINTEGUMENTA-like 6 [Source:UniProtKB/TrEMBL;Acc:F4KGW7]","protein_coding"
"At5g10530","No alias","Arabidopsis thaliana","L-type lectin-domain containing receptor kinase IX.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA5]","protein_coding"
"At5g13310","No alias","Arabidopsis thaliana","Uncharacterized protein At5g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LYU5]","protein_coding"
"At5g13560","No alias","Arabidopsis thaliana","At5g13560 [Source:UniProtKB/TrEMBL;Acc:Q8GY46]","protein_coding"
"At5g13960","No alias","Arabidopsis thaliana","Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]","protein_coding"
"At5g14020","No alias","Arabidopsis thaliana","Endosomal targeting BRO1-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q0WSL5]","protein_coding"
"At5g15980","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]","protein_coding"
"At5g16140","No alias","Arabidopsis thaliana","Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF14]","protein_coding"
"At5g16530","No alias","Arabidopsis thaliana","Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]","protein_coding"
"At5g17320","No alias","Arabidopsis thaliana","Homeobox-leucine zipper protein HDG9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFI0]","protein_coding"
"At5g17370","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G17370]","protein_coding"
"At5g17790","No alias","Arabidopsis thaliana","Zinc finger protein VAR3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8S9K3]","protein_coding"
"At5g17960","No alias","Arabidopsis thaliana","CHP-rich zinc finger protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FJG5]","protein_coding"
"At5g18440","No alias","Arabidopsis thaliana","NUFIP [Source:UniProtKB/TrEMBL;Acc:A0A178UB40]","protein_coding"
"At5g18750","No alias","Arabidopsis thaliana","DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]","protein_coding"
"At5g20690","No alias","Arabidopsis thaliana","Pollen receptor-like kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q3E991]","protein_coding"
"At5g22810","No alias","Arabidopsis thaliana","GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT5G22810]","protein_coding"
"At5g25415","No alias","Arabidopsis thaliana","Protein of Unknown Function (DUF239) [Source:TAIR;Acc:AT5G25415]","protein_coding"
"At5g25860","No alias","Arabidopsis thaliana","Putative F-box/LRR-repeat protein At5g25860 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7J7]","protein_coding"
"At5g28590","No alias","Arabidopsis thaliana","DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:F4K8J6]","protein_coding"
"At5g28720","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q3E8W3]","protein_coding"
"At5g36140","No alias","Arabidopsis thaliana","Function unknown","protein_coding"
"At5g37040","No alias","Arabidopsis thaliana","Putative F-box protein At5g37040 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHW4]","protein_coding"
"At5g37050","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archa /.../; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G37050]","protein_coding"
"At5g38450","No alias","Arabidopsis thaliana","Cytokinin hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q9FF18]","protein_coding"
"At5g39130","No alias","Arabidopsis thaliana","Germin-like protein subfamily 1 member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIC8]","protein_coding"
"At5g39380","No alias","Arabidopsis thaliana","Emb [Source:UniProtKB/TrEMBL;Acc:Q9FLZ6]","protein_coding"
"At5g39740","No alias","Arabidopsis thaliana","RPL5B [Source:UniProtKB/TrEMBL;Acc:A0A178UJU5]","protein_coding"
"At5g43230","No alias","Arabidopsis thaliana","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G43230]","protein_coding"
"At5g43360","No alias","Arabidopsis thaliana","Probable inorganic phosphate transporter 1-3 [Source:UniProtKB/Swiss-Prot;Acc:O48639]","protein_coding"
"At5g43480","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9LSW4]","protein_coding"
"At5g44150","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 specie /.../hae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G44150]","protein_coding"
"At5g44360","No alias","Arabidopsis thaliana","FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44360]","protein_coding"
"At5g44920","No alias","Arabidopsis thaliana","TIR domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q0WSX8]","protein_coding"
"At5g45220","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9FKE3]","protein_coding"
"At5g45590","No alias","Arabidopsis thaliana","Ribosomal protein L35 [Source:UniProtKB/TrEMBL;Acc:Q8LAA7]","protein_coding"
"At5g46740","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIQ1]","protein_coding"
"At5g46900","No alias","Arabidopsis thaliana","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q39100]","protein_coding"
"At5g47210","No alias","Arabidopsis thaliana","RGG repeats nuclear RNA binding protein C [Source:UniProtKB/Swiss-Prot;Acc:Q9LVT8]","protein_coding"
"At5g47940","No alias","Arabidopsis thaliana","40S ribosomal protein S27 [Source:UniProtKB/TrEMBL;Acc:Q9FGV5]","protein_coding"
"At5g48880","No alias","Arabidopsis thaliana","PKT2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEC0]","protein_coding"
"At5g49030","No alias","Arabidopsis thaliana","tRNA synthetase class I (I, L, M and V) family protein [Source:UniProtKB/TrEMBL;Acc:F4K4Q2]","protein_coding"
"At5g49310","No alias","Arabidopsis thaliana","Importin subunit alpha-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ09]","protein_coding"
"At5g49660","No alias","Arabidopsis thaliana","Receptor protein-tyrosine kinase CEPR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL5]","protein_coding"
"At5g49870","No alias","Arabidopsis thaliana","Jacalin-related lectin 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY2]","protein_coding"
"At5g50580","No alias","Arabidopsis thaliana","SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]","protein_coding"
"At5g51810","No alias","Arabidopsis thaliana","Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]","protein_coding"
"At5g52260","No alias","Arabidopsis thaliana","MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5]","protein_coding"
"At5g52620","No alias","Arabidopsis thaliana","Putative F-box protein At5g52620 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF5]","protein_coding"
"At5g54010","No alias","Arabidopsis thaliana","UDP-glycosyltransferase 79B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN26]","protein_coding"
"At5g54650","No alias","Arabidopsis thaliana","Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]","protein_coding"
"At5g55040","No alias","Arabidopsis thaliana","DNA-binding bromodomain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8VY17]","protein_coding"
"At5g55980","No alias","Arabidopsis thaliana","Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FKU6]","protein_coding"
"At5g56330","No alias","Arabidopsis thaliana","alpha carbonic anhydrase 8 [Source:TAIR;Acc:AT5G56330]","protein_coding"
"At5g56500","No alias","Arabidopsis thaliana","Chaperonin 60 subunit beta 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:C0Z361]","protein_coding"
"At5g56710","No alias","Arabidopsis thaliana","60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]","protein_coding"
"At5g57160","No alias","Arabidopsis thaliana","DNA ligase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LL84]","protein_coding"
"At5g57500","No alias","Arabidopsis thaliana","Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9FKM1]","protein_coding"
"At5g58980","No alias","Arabidopsis thaliana","Neutral ceramidase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4KHQ8]","protein_coding"
"At5g59520","No alias","Arabidopsis thaliana","Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]","protein_coding"
"At5g59650","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G59650]","protein_coding"
"At5g60210","No alias","Arabidopsis thaliana","ROP interactive partner 5 [Source:TAIR;Acc:AT5G60210]","protein_coding"
"At5g60310","No alias","Arabidopsis thaliana","Putative L-type lectin-domain containing receptor kinase I.10 [Source:UniProtKB/Swiss-Prot;Acc:Q3E884]","protein_coding"
"At5g61000","No alias","Arabidopsis thaliana","Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UJ91]","protein_coding"
"At5g61420","No alias","Arabidopsis thaliana","PMG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UN88]","protein_coding"
"At5g61470","No alias","Arabidopsis thaliana","C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9FII6]","protein_coding"
"At5g61920","No alias","Arabidopsis thaliana","FLX4 [Source:UniProtKB/TrEMBL;Acc:A0A178USJ6]","protein_coding"
"At5g63390","No alias","Arabidopsis thaliana","O-fucosyltransferase 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMW3]","protein_coding"
"At5g65130","No alias","Arabidopsis thaliana","Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT5G65130]","protein_coding"
"At5g66000","No alias","Arabidopsis thaliana","Uncharacterized protein At5g66000 [Source:UniProtKB/TrEMBL;Acc:Q9FKY2]","protein_coding"
"At5g66970","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1PDF5]","protein_coding"
"At5g67280","No alias","Arabidopsis thaliana","At5g67280/K3G17_4 [Source:UniProtKB/TrEMBL;Acc:Q9FGQ5]","protein_coding"
"Bradi1g01007","No alias","Brachypodium distachyon","Ku80 family protein","protein_coding"
"Bradi1g02880","No alias","Brachypodium distachyon","BTB/POZ/Kelch-associated protein","protein_coding"
"Bradi1g05116","No alias","Brachypodium distachyon","Nucleotidylyl transferase superfamily protein","protein_coding"
"Bradi1g14630","No alias","Brachypodium distachyon","calcium ATPase 2","protein_coding"
"Bradi1g17250","No alias","Brachypodium distachyon","CBL-interacting protein kinase 3","protein_coding"
"Bradi1g18660","No alias","Brachypodium distachyon","Tryptophan/tyrosine permease","protein_coding"
"Bradi1g21470","No alias","Brachypodium distachyon","bromo-adjacent homology (BAH) domain-containing protein","protein_coding"
"Bradi1g26970","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi1g29090","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi1g29187","No alias","Brachypodium distachyon","non-intrinsic ABC protein 12","protein_coding"
"Bradi1g31617","No alias","Brachypodium distachyon","ENTH/ANTH/VHS superfamily protein","protein_coding"
"Bradi1g33560","No alias","Brachypodium distachyon","DNA-directed DNA polymerases","protein_coding"
"Bradi1g34857","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Bradi1g38000","No alias","Brachypodium distachyon","initiator tRNA phosphoribosyl transferase family protein","protein_coding"
"Bradi1g39220","No alias","Brachypodium distachyon","Protein of unknown function (DUF630 and DUF632)","protein_coding"
"Bradi1g39938","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g40710","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g41808","No alias","Brachypodium distachyon","Cyclin/Brf1-like TBP-binding protein","protein_coding"
"Bradi1g45270","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi1g48120","No alias","Brachypodium distachyon","Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain","protein_coding"
"Bradi1g52650","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g53060","No alias","Brachypodium distachyon","D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding"
"Bradi1g55250","No alias","Brachypodium distachyon","KU70 homolog","protein_coding"
"Bradi1g55667","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi1g60972","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g62590","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi1g66130","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi1g66400","No alias","Brachypodium distachyon","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain","protein_coding"
"Bradi1g66740","No alias","Brachypodium distachyon","N2,N2-dimethylguanosine tRNA methyltransferase","protein_coding"
"Bradi1g67050","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi1g67510","No alias","Brachypodium distachyon","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"Bradi1g71090","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g71490","No alias","Brachypodium distachyon","SecY protein transport family protein","protein_coding"
"Bradi1g71495","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi1g73110","No alias","Brachypodium distachyon","SUPPRESSOR OF AUXIN RESISTANCE 3","protein_coding"
"Bradi1g74287","No alias","Brachypodium distachyon","RECQ helicase L2","protein_coding"
"Bradi1g76700","No alias","Brachypodium distachyon","GTP-binding family protein","protein_coding"
"Bradi1g78714","No alias","Brachypodium distachyon","lysophosphatidyl acyltransferase 5","protein_coding"
"Bradi2g06627","No alias","Brachypodium distachyon","Alg9-like mannosyltransferase family","protein_coding"
"Bradi2g25710","No alias","Brachypodium distachyon","cytochrome P450, family 721, subfamily A, polypeptide 1","protein_coding"
"Bradi2g26315","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g29750","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi2g34876","No alias","Brachypodium distachyon","nuclear RNA polymerase D1A","protein_coding"
"Bradi2g34980","No alias","Brachypodium distachyon","binding","protein_coding"
"Bradi2g38577","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi2g41187","No alias","Brachypodium distachyon","Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)","protein_coding"
"Bradi2g42017","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi2g43210","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding"
"Bradi2g46230","No alias","Brachypodium distachyon","Homeodomain-like transcriptional regulator","protein_coding"
"Bradi2g46780","No alias","Brachypodium distachyon","DNA LIGASE 6","protein_coding"
"Bradi2g48230","No alias","Brachypodium distachyon","violaxanthin de-epoxidase-related","protein_coding"
"Bradi3g02680","No alias","Brachypodium distachyon","Phosphoribosyltransferase family protein","protein_coding"
"Bradi3g02932","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g03637","No alias","Brachypodium distachyon","SUPPRESSOR OF AUXIN RESISTANCE1","protein_coding"
"Bradi3g04130","No alias","Brachypodium distachyon","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Bradi3g08050","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi3g10530","No alias","Brachypodium distachyon","elongation factor family protein","protein_coding"
"Bradi3g11327","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g14917","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi3g17200","No alias","Brachypodium distachyon","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding"
"Bradi3g20268","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g20480","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi3g20650","No alias","Brachypodium distachyon","RNAse E/G-like","protein_coding"
"Bradi3g27027","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi3g27740","No alias","Brachypodium distachyon","transmembrane protein-related","protein_coding"
"Bradi3g27970","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g29530","No alias","Brachypodium distachyon","DNA ligase 1","protein_coding"
"Bradi3g31490","No alias","Brachypodium distachyon","guanyl-nucleotide exchange factors;GTPase binding;GTP binding","protein_coding"
"Bradi3g33530","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g35210","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Bradi3g36277","No alias","Brachypodium distachyon","DNA repair protein Rad4 family","protein_coding"
"Bradi3g40790","No alias","Brachypodium distachyon","signal recognition particle binding","protein_coding"
"Bradi3g43280","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Bradi3g45946","No alias","Brachypodium distachyon","xyloglucanase 113","protein_coding"
"Bradi3g46800","No alias","Brachypodium distachyon","NAP1-related protein 2","protein_coding"
"Bradi3g48157","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi3g51077","No alias","Brachypodium distachyon","Stabilizer of iron transporter SufD / Polynucleotidyl transferase","protein_coding"
"Bradi3g59640","No alias","Brachypodium distachyon","Glycosyl hydrolase family 47 protein","protein_coding"
"Bradi3g60430","No alias","Brachypodium distachyon","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"Bradi4g02100","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi4g03050","No alias","Brachypodium distachyon","phragmoplast orienting kinesin 2","protein_coding"
"Bradi4g06970","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi4g09886","No alias","Brachypodium distachyon","WRKY DNA-binding protein 33","protein_coding"
"Bradi4g11517","No alias","Brachypodium distachyon","sequence-specific DNA binding;sequence-specific DNA binding transcription factors","protein_coding"
"Bradi4g16010","No alias","Brachypodium distachyon","carotenoid isomerase","protein_coding"
"Bradi4g27460","No alias","Brachypodium distachyon","embryo defective 1381","protein_coding"
"Bradi4g28460","No alias","Brachypodium distachyon","SU(VAR)3-9 homolog 6","protein_coding"
"Bradi4g30780","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 3C","protein_coding"
"Bradi4g34090","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi4g34150","No alias","Brachypodium distachyon","myosin heavy chain-related","protein_coding"
"Bradi4g37263","No alias","Brachypodium distachyon","MUTL protein homolog 3","protein_coding"
"Bradi4g40560","No alias","Brachypodium distachyon","Pseudouridine synthase family protein","protein_coding"
"Bradi4g40583","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi5g02047","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi5g10310","No alias","Brachypodium distachyon","Formyl transferase","protein_coding"
"Bradi5g12380","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi5g13770","No alias","Brachypodium distachyon","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Bradi5g16067","No alias","Brachypodium distachyon","binding;RNA binding","protein_coding"
"Bradi5g20927","No alias","Brachypodium distachyon","DNA ligase IV","protein_coding"
"Bradi5g21480","No alias","Brachypodium distachyon","Terpenoid cyclases/Protein prenyltransferases superfamily protein","protein_coding"
"Bradi5g22187","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi5g23450","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi5g23540","No alias","Brachypodium distachyon","nuclear RNA polymerase D2A","protein_coding"
"Brara.A00063.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00088.1","No alias","Brassica rapa","tRNA cytidine-methyltransferase *(TRM4) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Brara.A00444.1","No alias","Brassica rapa","beta-type carbonic anhydrase","protein_coding"
"Brara.A00554.1","No alias","Brassica rapa","nucleotide sugar transporter *(UAfT)","protein_coding"
"Brara.A00590.1","No alias","Brassica rapa","cohesin cofactor *(PDS5)","protein_coding"
"Brara.A00944.1","No alias","Brassica rapa","adenylosuccinate lyase *(PUR8)","protein_coding"
"Brara.A01086.1","No alias","Brassica rapa","RNA editing factor *(MORF)","protein_coding"
"Brara.A01459.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01584.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02352.1","No alias","Brassica rapa","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"Brara.A02836.1","No alias","Brassica rapa","subunit alpha of CCT chaperonin folding complex *(CCT1)","protein_coding"
"Brara.A03384.1","No alias","Brassica rapa","subunit eta *(CCT7) of CCT chaperonin folding complex","protein_coding"
"Brara.A03571.1","No alias","Brassica rapa","component *(uL10) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.A03592.1","No alias","Brassica rapa","component *(RRP42) of exosome EXO9 core complex","protein_coding"
"Brara.A03682.1","No alias","Brassica rapa","subunit gamma *(CCT3) of CCT chaperonin folding complex","protein_coding"
"Brara.A03795.1","No alias","Brassica rapa","subunit theta *(CCT8) of CCT chaperonin folding complex","protein_coding"
"Brara.B00016.1","No alias","Brassica rapa","clade E phosphatase","protein_coding"
"Brara.B00159.1","No alias","Brassica rapa","subunit delta of cargo adaptor F-subcomplex","protein_coding"
"Brara.B00396.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.B00533.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.B00586.1","No alias","Brassica rapa","voltage-gated anion channel *(VDAC)","protein_coding"
"Brara.B00859.1","No alias","Brassica rapa","GTPase *(Ran)","protein_coding"
"Brara.B00878.1","No alias","Brassica rapa","component *(eS8) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.B00913.1","No alias","Brassica rapa","subunit beta *(CCT2) of CCT chaperonin folding complex","protein_coding"
"Brara.B00969.1","No alias","Brassica rapa","ROP-activating protein *(RopGAP)","protein_coding"
"Brara.B01280.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01439.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01699.1","No alias","Brassica rapa","LSU ribosomal large subunit export factor *(MDN1)","protein_coding"
"Brara.B02039.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.B02283.1","No alias","Brassica rapa","substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex","protein_coding"
"Brara.B02578.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02740.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02847.1","No alias","Brassica rapa","component *(uL5) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.B02951.1","No alias","Brassica rapa","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Brara.B03102.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03555.1","No alias","Brassica rapa","component *(Cox-X1) of cytochrome c oxidase complex","protein_coding"
"Brara.B03985.1","No alias","Brassica rapa","auxin efflux transporter *(PILS) & auxin transporter *(PILS)","protein_coding"
"Brara.C00072.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding"
"Brara.C00286.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00453.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.C00959.1","No alias","Brassica rapa","subunit beta *(CCT2) of CCT chaperonin folding complex","protein_coding"
"Brara.C01279.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01525.1","No alias","Brassica rapa","MADS/AGL-type transcription factor","protein_coding"
"Brara.C01774.1","No alias","Brassica rapa","phosphatase *(EYA)","protein_coding"
"Brara.C02182.1","No alias","Brassica rapa","component *(NPG) of phosphatidylinositol 4-kinase complex","protein_coding"
"Brara.C02365.1","No alias","Brassica rapa","rRNA adenosine dimethylase *(DIM1A)","protein_coding"
"Brara.C02377.1","No alias","Brassica rapa","component *(SANT) of histone deacetylation complex","protein_coding"
"Brara.C02449.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02906.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.C02989.1","No alias","Brassica rapa","component *(mS81) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.C03132.1","No alias","Brassica rapa","subunit gamma *(CCT3) of CCT chaperonin folding complex","protein_coding"
"Brara.C03159.1","No alias","Brassica rapa","SSU processome assembly factor *(UTP10)","protein_coding"
"Brara.C04123.1","No alias","Brassica rapa","RNA editing factor *(DYW2)","protein_coding"
"Brara.C04556.1","No alias","Brassica rapa","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Brara.D00144.1","No alias","Brassica rapa","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding"
"Brara.D00558.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D00631.1","No alias","Brassica rapa","acyl CoA oxidase *(ACX) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Brara.D00688.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01391.1","No alias","Brassica rapa","mRNA poly-A-tail binding factor *(PABP)","protein_coding"
"Brara.D02039.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02470.1","No alias","Brassica rapa","associated component *(ETG1) of MCM replicative DNA helicase complex","protein_coding"
"Brara.D02498.1","No alias","Brassica rapa","transcription factor *(bZIP17/28)) & bZIP class-B transcription factor","protein_coding"
"Brara.E00846.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00929.1","No alias","Brassica rapa","bifunctional aminoimidazole-carboximide RN transformylase and IMP cyclohydrolase *(PUR9/10)","protein_coding"
"Brara.E01068.1","No alias","Brassica rapa","aromatic amino acid transporter *(HAAAP)","protein_coding"
"Brara.E01218.1","No alias","Brassica rapa","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Brara.E01589.1","No alias","Brassica rapa","component *(eL37) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E01889.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Brara.E02170.1","No alias","Brassica rapa","aspartate transcarbamoylase *(ATC)","protein_coding"
"Brara.E02440.1","No alias","Brassica rapa","component *(uL3m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.E03108.1","No alias","Brassica rapa","mRNA capping enzyme & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E03184.1","No alias","Brassica rapa","component *(p24-beta) of GPI-anchor protein cargo receptor complex","protein_coding"
"Brara.E03603.1","No alias","Brassica rapa","subunit beta *(QCR1) of cytochrome c reductase subcomplex & subunit beta of MPP mitochondrial signal peptidase heterodimer & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.F00302.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00544.1","No alias","Brassica rapa","DNA replication DNA ligase *(LIG1) & DNA ligase *(LIG1) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Brara.F00988.1","No alias","Brassica rapa","EC_6.1 ligase forming carbon-oxygen bond & valine-tRNA ligase","protein_coding"
"Brara.F01463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01654.1","No alias","Brassica rapa","sugar efflux transporter *(SWEET)","protein_coding"
"Brara.F02000.1","No alias","Brassica rapa","regulatory protein ELP1 of PRC1 histone mono-ubiquitination complex","protein_coding"
"Brara.F02142.1","No alias","Brassica rapa","sugar efflux transporter *(SWEET)","protein_coding"
"Brara.F02277.1","No alias","Brassica rapa","component *(POLD1) of DNA polymerase delta complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F02483.1","No alias","Brassica rapa","P3A-type proton-translocating ATPase *(AHA)","protein_coding"
"Brara.F02540.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02940.1","No alias","Brassica rapa","transcription factor *(A/B-GATA)","protein_coding"
"Brara.F03561.1","No alias","Brassica rapa","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Brara.G00081.1","No alias","Brassica rapa","component *(eL28) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G00308.1","No alias","Brassica rapa","small GTPase *(ROP)","protein_coding"
"Brara.G00411.1","No alias","Brassica rapa","RNA editing factor *(MORF)","protein_coding"
"Brara.G00463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00739.1","No alias","Brassica rapa","GeBP-type transcription factor","protein_coding"
"Brara.G00809.1","No alias","Brassica rapa","tyrosine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Brara.G00981.1","No alias","Brassica rapa","component *(eS31) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.G01568.1","No alias","Brassica rapa","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G02252.1","No alias","Brassica rapa","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Brara.G02326.1","No alias","Brassica rapa","subunit beta of NAC ribosome-associated chaperone complex","protein_coding"
"Brara.G02666.1","No alias","Brassica rapa","DNA ligase *(LIG6) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Brara.G02789.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03422.1","No alias","Brassica rapa","substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin ligase complex","protein_coding"
"Brara.H00661.1","No alias","Brassica rapa","accessory protein *(PlCALM3)","protein_coding"
"Brara.H00749.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01008.1","No alias","Brassica rapa","assembly factor INDL of mitochondrial ISC system transfer phase","protein_coding"
"Brara.H01010.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01123.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01806.1","No alias","Brassica rapa","large subunit of ribonucleoside-diphosphate reductase heterodimer & EC_1.17 oxidoreductase acting on CH or CH2 group","protein_coding"
"Brara.H01898.1","No alias","Brassica rapa","mRNA-translocation factor *(eEF2))","protein_coding"
"Brara.H01903.1","No alias","Brassica rapa","component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex","protein_coding"
"Brara.H02404.1","No alias","Brassica rapa","histone chaperone *(NRP)","protein_coding"
"Brara.H02738.1","No alias","Brassica rapa","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Brara.H02807.1","No alias","Brassica rapa","component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex","protein_coding"
"Brara.H02895.1","No alias","Brassica rapa","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Brara.H02962.1","No alias","Brassica rapa","acyl-CoA desaturase *(ADS) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.H03051.1","No alias","Brassica rapa","cryptochrome photoreceptor *(CRY)","protein_coding"
"Brara.H03072.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00361.1","No alias","Brassica rapa","Crinkly-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00438.1","No alias","Brassica rapa","component *(eS24) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I01491.1","No alias","Brassica rapa","GeBP-type transcription factor","protein_coding"
"Brara.I01794.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01865.1","No alias","Brassica rapa","nucleoside diphosphate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I01908.1","No alias","Brassica rapa","component *(uL5) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I02269.1","No alias","Brassica rapa","UDP-D-glucuronic acid 4-epimerase","protein_coding"
"Brara.I02795.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03043.1","No alias","Brassica rapa","subunit epsilon *(CCT5) of CCT chaperonin folding complex","protein_coding"
"Brara.I03601.1","No alias","Brassica rapa","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I03851.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.I04253.1","No alias","Brassica rapa","gamma tubulin component *(TUG1) of gamma-Tubulin ring complex","protein_coding"
"Brara.I04302.1","No alias","Brassica rapa","component *(eS31) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I05009.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05035.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05330.1","No alias","Brassica rapa","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Brara.J00029.1","No alias","Brassica rapa","E3 ubiquitin protein ligase *(PUB32)","protein_coding"
"Brara.J00207.1","No alias","Brassica rapa","modification writer component *(RING1) of modification writer protein components","protein_coding"
"Brara.J00220.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00315.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00391.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00668.1","No alias","Brassica rapa","adapter component *(SEU/SLK) of transcriptional co-repressor complex","protein_coding"
"Brara.J01024.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01141.1","No alias","Brassica rapa","DNA ligase component *(LIG4) of LIG4-XRCC4 ligase complex & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Brara.J01354.1","No alias","Brassica rapa","component *(uS8) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.J01654.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02249.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.J02272.1","No alias","Brassica rapa","argininosuccinate lyase & EC_4.3 carbon-nitrogen lyase","protein_coding"
"Brara.J02315.1","No alias","Brassica rapa","histone *(H3)","protein_coding"
"Brara.J02435.1","No alias","Brassica rapa","subunit alpha of succinyl-CoA ligase heterodimer & EC_6.2 ligase forming carbon-sulfur bond","protein_coding"
"Brara.J02464.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02465.1","No alias","Brassica rapa","Qbc-type SNAP25-group component of SNARE membrane fusion complex","protein_coding"
"Brara.K00204.1","No alias","Brassica rapa","EC_6.1 ligase forming carbon-oxygen bond & glycine-tRNA ligase","protein_coding"
"Brara.K00749.1","No alias","Brassica rapa","WRKY-type transcription factor","protein_coding"
"Brara.K00861.1","No alias","Brassica rapa","subunit f of ATP synthase membrane MF0 subcomplex","protein_coding"
"Cre01.g000100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g002787","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase family protein with chitinase insertion domain","protein_coding"
"Cre01.g003463","No alias","Chlamydomonas reinhardtii","MUTS homolog 2","protein_coding"
"Cre01.g012100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g013400","No alias","Chlamydomonas reinhardtii","GPI transamidase component PIG-S-related","protein_coding"
"Cre01.g013550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g015250","No alias","Chlamydomonas reinhardtii","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding"
"Cre01.g016556","No alias","Chlamydomonas reinhardtii","casein kinase II  beta chain 2","protein_coding"
"Cre01.g017100","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding"
"Cre01.g017450","No alias","Chlamydomonas reinhardtii","DNA polymerase alpha 2","protein_coding"
"Cre01.g019150","No alias","Chlamydomonas reinhardtii","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding"
"Cre01.g022550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g023550","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat (LRR) family protein","protein_coding"
"Cre01.g029100","No alias","Chlamydomonas reinhardtii","PSF2","protein_coding"
"Cre01.g031300","No alias","Chlamydomonas reinhardtii","calcium dependent protein kinase 1","protein_coding"
"Cre01.g033091","No alias","Chlamydomonas reinhardtii","endoribonucleases","protein_coding"
"Cre01.g034200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g034500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g034750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g036800","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre01.g041500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g044150","No alias","Chlamydomonas reinhardtii","methyltransferases","protein_coding"
"Cre01.g056696","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g074350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g077024","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g078450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g079926","No alias","Chlamydomonas reinhardtii","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Cre02.g081350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g082400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g082900","No alias","Chlamydomonas reinhardtii","Nucleoside transporter family protein","protein_coding"
"Cre02.g084750","No alias","Chlamydomonas reinhardtii","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Cre02.g085701","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding"
"Cre02.g088450","No alias","Chlamydomonas reinhardtii","Phox-associated domain;Phox-like;Sorting nexin, C-terminal","protein_coding"
"Cre02.g093975","No alias","Chlamydomonas reinhardtii","U2 snRNP auxilliary factor, large subunit, splicing factor","protein_coding"
"Cre02.g095050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g095071","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Cre02.g095101","No alias","Chlamydomonas reinhardtii","splicing factor-related","protein_coding"
"Cre02.g095113","No alias","Chlamydomonas reinhardtii","tubulin folding cofactor E / Pfifferling (PFI)","protein_coding"
"Cre02.g095294","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre02.g096200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g100000","No alias","Chlamydomonas reinhardtii","Replication protein A, subunit RPA32","protein_coding"
"Cre02.g103350","No alias","Chlamydomonas reinhardtii","fatty acid amide hydrolase","protein_coding"
"Cre02.g104950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g104951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g108000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre02.g108050","No alias","Chlamydomonas reinhardtii","B-cell receptor-associated 31-like","protein_coding"
"Cre02.g108150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g116150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g117400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g117410","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g118600","No alias","Chlamydomonas reinhardtii","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"Cre02.g118900","No alias","Chlamydomonas reinhardtii","Metal-dependent protein hydrolase","protein_coding"
"Cre02.g142186","No alias","Chlamydomonas reinhardtii","Tubulin/FtsZ family protein","protein_coding"
"Cre02.g142286","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g144250","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 72, subfamily A, polypeptide 10","protein_coding"
"Cre02.g145150","No alias","Chlamydomonas reinhardtii","CBS domain-containing protein with a domain of unknown function (DUF21)","protein_coding"
"Cre03.g144224","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g144867","No alias","Chlamydomonas reinhardtii","LisH/CRA/RING-U-box domains-containing protein","protein_coding"
"Cre03.g145687","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding"
"Cre03.g153400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g154800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g159750","No alias","Chlamydomonas reinhardtii","EAP30/Vps36 family protein","protein_coding"
"Cre03.g160150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g160650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g163350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g163850","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre03.g168750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g174700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g175926","No alias","Chlamydomonas reinhardtii","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Cre03.g178650","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre03.g180050","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre03.g184200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g186750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g186850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g187250","No alias","Chlamydomonas reinhardtii","HR-like lesion-inducing protein-related","protein_coding"
"Cre03.g191100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g191200","No alias","Chlamydomonas reinhardtii","double-stranded RNA binding protein-related / DsRBD protein-related","protein_coding"
"Cre03.g199400","No alias","Chlamydomonas reinhardtii","origin recognition complex second largest subunit 2","protein_coding"
"Cre03.g200500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g202200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g202202","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g202550","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre03.g203050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g203950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g205400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g205701","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g205809","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding"
"Cre03.g207650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g209281","No alias","Chlamydomonas reinhardtii","vacuolar protein sorting 41","protein_coding"
"Cre04.g211650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g211700","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with  ABF2","protein_coding"
"Cre04.g212400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g213050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g213904","No alias","Chlamydomonas reinhardtii","cyclin-dependent kinase E;1","protein_coding"
"Cre04.g214250","No alias","Chlamydomonas reinhardtii","Stabilizer of iron transporter SufD / Polynucleotidyl transferase","protein_coding"
"Cre04.g214350","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding"
"Cre04.g217919","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g217954","No alias","Chlamydomonas reinhardtii","autoinhibited Ca(2+)-ATPase 10","protein_coding"
"Cre04.g220000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre04.g221100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g222550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g223000","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding"
"Cre04.g223750","No alias","Chlamydomonas reinhardtii","myosin 2","protein_coding"
"Cre04.g225650","No alias","Chlamydomonas reinhardtii","Cystatin/monellin superfamily protein","protein_coding"
"Cre04.g229250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g232202","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g233102","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g232751","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g233350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234645","No alias","Chlamydomonas reinhardtii","sodium proton exchanger, putative (NHX7) (SOS1)","protein_coding"
"Cre05.g235700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g235750","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding"
"Cre05.g236000","No alias","Chlamydomonas reinhardtii","ACT-like protein tyrosine kinase family protein","protein_coding"
"Cre05.g236525","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g239800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g243455","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g243900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g245100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g245351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g245700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g247550","No alias","Chlamydomonas reinhardtii","glutathione S-transferase THETA 1","protein_coding"
"Cre06.g255250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g261026","No alias","Chlamydomonas reinhardtii","like SEX4 1","protein_coding"
"Cre06.g263650","No alias","Chlamydomonas reinhardtii","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein","protein_coding"
"Cre06.g263900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g264850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g266850","No alias","Chlamydomonas reinhardtii","GATA transcription factor 19","protein_coding"
"Cre06.g268501","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g272475","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g275200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g276100","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre06.g277801","No alias","Chlamydomonas reinhardtii","DNA ligase IV","protein_coding"
"Cre06.g278124","No alias","Chlamydomonas reinhardtii","Vacuolar sorting protein 39","protein_coding"
"Cre06.g278145","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278146","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278149","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278177","No alias","Chlamydomonas reinhardtii","DNA LIGASE 6","protein_coding"
"Cre06.g278260","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2C family protein","protein_coding"
"Cre06.g281750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g285001","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g285650","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 6","protein_coding"
"Cre06.g285700","No alias","Chlamydomonas reinhardtii","Putative integral membrane protein conserved region (DUF2404)","protein_coding"
"Cre06.g285850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g288100","No alias","Chlamydomonas reinhardtii","mRNAadenosine methylase","protein_coding"
"Cre06.g290250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g294200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g295050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g295700","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre06.g297016","No alias","Chlamydomonas reinhardtii","homolog of Xeroderma pigmentosum complementation group B 2","protein_coding"
"Cre06.g297082","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"Cre06.g300300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g301951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g303000","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat family protein","protein_coding"
"Cre06.g309750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g309800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g309951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g311000","No alias","Chlamydomonas reinhardtii","Major facilitator superfamily protein","protein_coding"
"Cre07.g312350","No alias","Chlamydomonas reinhardtii","DNA primases;DNA primases","protein_coding"
"Cre07.g316100","No alias","Chlamydomonas reinhardtii","TRS120","protein_coding"
"Cre07.g316350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g316850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g316900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g317800","No alias","Chlamydomonas reinhardtii","exocyst complex component sec15A","protein_coding"
"Cre07.g320250","No alias","Chlamydomonas reinhardtii","CW7","protein_coding"
"Cre07.g325716","No alias","Chlamydomonas reinhardtii","DNA ligase 1","protein_coding"
"Cre07.g327000","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF1712)","protein_coding"
"Cre07.g329861","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g329900","No alias","Chlamydomonas reinhardtii","CHASE domain containing histidine kinase protein","protein_coding"
"Cre07.g331250","No alias","Chlamydomonas reinhardtii","catalytics","protein_coding"
"Cre07.g332600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g333000","No alias","Chlamydomonas reinhardtii","cysteine proteinase1","protein_coding"
"Cre07.g338000","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g338400","No alias","Chlamydomonas reinhardtii","glycine-rich protein","protein_coding"
"Cre07.g338550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g338602","No alias","Chlamydomonas reinhardtii","Y-family DNA polymerase H","protein_coding"
"Cre07.g339104","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g342000","No alias","Chlamydomonas reinhardtii","protein-l-isoaspartate methyltransferase 1","protein_coding"
"Cre07.g347900","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre07.g350000","No alias","Chlamydomonas reinhardtii","triglyceride lipases;triglyceride lipases","protein_coding"
"Cre07.g350450","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding"
"Cre07.g353650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g354600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g355200","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 5","protein_coding"
"Cre07.g355550","No alias","Chlamydomonas reinhardtii","Nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"Cre07.g357500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g358537","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g360250","No alias","Chlamydomonas reinhardtii","solute:sodium symporters;urea transmembrane transporters","protein_coding"
"Cre08.g360700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g361450","No alias","Chlamydomonas reinhardtii","Protein of unknown function (duplicated DUF1399)","protein_coding"
"Cre08.g362000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g362450","No alias","Chlamydomonas reinhardtii","alpha-amylase-like 3","protein_coding"
"Cre08.g363250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g363650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g365000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g375000","No alias","Chlamydomonas reinhardtii","dual specificity protein phosphatase family protein","protein_coding"
"Cre08.g381000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g384200","No alias","Chlamydomonas reinhardtii","Guanylate-binding family protein","protein_coding"
"Cre09.g387400","No alias","Chlamydomonas reinhardtii","recovery protein 3","protein_coding"
"Cre09.g387750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g387850","No alias","Chlamydomonas reinhardtii","RWP-RK domain-containing protein","protein_coding"
"Cre09.g387912","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g390150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g390208","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g391370","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g392505","No alias","Chlamydomonas reinhardtii","U-box domain-containing protein kinase family protein","protein_coding"
"Cre09.g393395","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre09.g393600","No alias","Chlamydomonas reinhardtii","DNA replication protein-related","protein_coding"
"Cre09.g393617","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g395584","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g397142","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g400553","No alias","Chlamydomonas reinhardtii","target of rapamycin","protein_coding"
"Cre09.g401367","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g402601","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g402900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g410000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g410300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g410600","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2C family protein","protein_coding"
"Cre09.g411050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g411450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g412250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g415850","No alias","Chlamydomonas reinhardtii","gamma carbonic anhydrase 2","protein_coding"
"Cre09.g416950","No alias","Chlamydomonas reinhardtii","mitogen-activated protein kinase phosphatase 1","protein_coding"
"Cre09.g417401","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g421000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g421650","No alias","Chlamydomonas reinhardtii","Nodulin MtN3 family protein","protein_coding"
"Cre10.g426950","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 707, subfamily A, polypeptide 3","protein_coding"
"Cre10.g428706","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g429017","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g430700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g433550","No alias","Chlamydomonas reinhardtii","DNA ligase IV","protein_coding"
"Cre10.g434700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g441100","No alias","Chlamydomonas reinhardtii","GPI transamidase component Gpi16 subunit family protein","protein_coding"
"Cre10.g441250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g441700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g443000","No alias","Chlamydomonas reinhardtii","ABC transporter of the mitochondrion 3","protein_coding"
"Cre10.g448600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g450600","No alias","Chlamydomonas reinhardtii","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein","protein_coding"
"Cre10.g451600","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase family protein with chitinase insertion domain","protein_coding"
"Cre10.g452300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g455850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre10.g457150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g461400","No alias","Chlamydomonas reinhardtii","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Cre10.g462300","No alias","Chlamydomonas reinhardtii","sorting nexin 2A","protein_coding"
"Cre10.g466800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467556","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467636","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre11.g467637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467691","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467791","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g468383","No alias","Chlamydomonas reinhardtii","F-box family protein","protein_coding"
"Cre11.g477250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g478184","No alias","Chlamydomonas reinhardtii","glycoside hydrolase family 2 protein","protein_coding"
"Cre11.g478456","No alias","Chlamydomonas reinhardtii","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"Cre11.g479350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g481082","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g482700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g483351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g488100","No alias","Chlamydomonas reinhardtii","Smg-4/UPF3 family protein","protein_coding"
"Cre12.g488752","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding"
"Cre12.g490550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g492200","No alias","Chlamydomonas reinhardtii","Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain","protein_coding"
"Cre12.g497650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g499550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g499600","No alias","Chlamydomonas reinhardtii","chloroplastic NIFS-like cysteine desulfurase","protein_coding"
"Cre12.g500150","No alias","Chlamydomonas reinhardtii","aldehyde dehydrogenase 2B7","protein_coding"
"Cre12.g502150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g502550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g509700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512500","No alias","Chlamydomonas reinhardtii","zinc knuckle (CCHC-type) family protein","protein_coding"
"Cre12.g515000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g515850","No alias","Chlamydomonas reinhardtii","proliferating cellular nuclear antigen 1","protein_coding"
"Cre12.g518107","No alias","Chlamydomonas reinhardtii","B-block binding subunit of TFIIIC","protein_coding"
"Cre12.g518350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g519150","No alias","Chlamydomonas reinhardtii","related to KPC1","protein_coding"
"Cre12.g523050","No alias","Chlamydomonas reinhardtii","1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases","protein_coding"
"Cre12.g525500","No alias","Chlamydomonas reinhardtii","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Cre12.g525600","No alias","Chlamydomonas reinhardtii","F-box family protein","protein_coding"
"Cre12.g528000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g530450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g532600","No alias","Chlamydomonas reinhardtii","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Cre12.g533600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g534200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g535050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g535150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g537200","No alias","Chlamydomonas reinhardtii","2-oxoglutarate dehydrogenase, E1 component","protein_coding"
"Cre12.g537700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g542400","No alias","Chlamydomonas reinhardtii","damaged DNA binding;DNA-directed DNA polymerases","protein_coding"
"Cre12.g542550","No alias","Chlamydomonas reinhardtii","DHHC-type zinc finger family protein","protein_coding"
"Cre12.g544115","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g544750","No alias","Chlamydomonas reinhardtii","ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Cre12.g547150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g549600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g550800","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding"
"Cre12.g554050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g558800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g559300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g560902","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g562400","No alias","Chlamydomonas reinhardtii","HSI2-like 1","protein_coding"
"Cre13.g563300","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding"
"Cre13.g563900","No alias","Chlamydomonas reinhardtii","ubiquitin 12","protein_coding"
"Cre13.g566500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g573450","No alias","Chlamydomonas reinhardtii","cleavage and polyadenylation specificity factor 160","protein_coding"
"Cre13.g576600","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre13.g580800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g584450","No alias","Chlamydomonas reinhardtii","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Cre13.g585651","No alias","Chlamydomonas reinhardtii","ATP-dependent protease La (LON) domain protein","protein_coding"
"Cre13.g587950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g603400","No alias","Chlamydomonas reinhardtii","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Cre13.g606150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g607550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g608050","No alias","Chlamydomonas reinhardtii","Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain","protein_coding"
"Cre14.g608900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g612000","No alias","Chlamydomonas reinhardtii","Protein kinase family protein with ARM repeat domain","protein_coding"
"Cre14.g612500","No alias","Chlamydomonas reinhardtii","Prenyltransferase family protein","protein_coding"
"Cre14.g612850","No alias","Chlamydomonas reinhardtii","U-box domain-containing protein kinase family protein","protein_coding"
"Cre14.g614500","No alias","Chlamydomonas reinhardtii","BTB-POZ and MATH domain 2","protein_coding"
"Cre14.g618350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g619500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g619800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g620050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g628752","No alias","Chlamydomonas reinhardtii","lipid phosphate phosphatase 3","protein_coding"
"Cre14.g631850","No alias","Chlamydomonas reinhardtii","Pyridoxal phosphate phosphatase-related protein","protein_coding"
"Cre14.g633250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g633300","No alias","Chlamydomonas reinhardtii","Oxoglutarate/iron-dependent oxygenase","protein_coding"
"Cre15.g640650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g647800","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2C family protein","protein_coding"
"Cre16.g651000","No alias","Chlamydomonas reinhardtii","Replication factor-A protein 1-related","protein_coding"
"Cre16.g656950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g657000","No alias","Chlamydomonas reinhardtii","TBP-associated factor II 15","protein_coding"
"Cre16.g657950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g658200","No alias","Chlamydomonas reinhardtii","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"Cre16.g658600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g659150","No alias","Chlamydomonas reinhardtii","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Cre16.g661250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g661650","No alias","Chlamydomonas reinhardtii","Integrase-type DNA-binding superfamily protein","protein_coding"
"Cre16.g667350","No alias","Chlamydomonas reinhardtii","two-pore  channel 1","protein_coding"
"Cre16.g667850","No alias","Chlamydomonas reinhardtii","DUTP-PYROPHOSPHATASE-LIKE 1","protein_coding"
"Cre16.g667900","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding"
"Cre16.g668800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g671825","No alias","Chlamydomonas reinhardtii","SART-1 family","protein_coding"
"Cre16.g671937","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g674152","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g675600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g678213","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre16.g678997","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g679200","No alias","Chlamydomonas reinhardtii","peroxisome 1","protein_coding"
"Cre16.g679400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g679950","No alias","Chlamydomonas reinhardtii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Cre16.g680150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g684155","No alias","Chlamydomonas reinhardtii","zinc ion binding","protein_coding"
"Cre16.g686622","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g688638","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g689250","No alias","Chlamydomonas reinhardtii","ARM repeat superfamily protein","protein_coding"
"Cre16.g692750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g694201","No alias","Chlamydomonas reinhardtii","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Cre16.g694800","No alias","Chlamydomonas reinhardtii","Arabidopsis thaliana protein of unknown function (DUF821)","protein_coding"
"Cre16.g695800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g699700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g700850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g701350","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Cre17.g706650","No alias","Chlamydomonas reinhardtii","EAP30/Vps36 family protein","protein_coding"
"Cre17.g707137","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g707400","No alias","Chlamydomonas reinhardtii","RNA-binding KH domain-containing protein","protein_coding"
"Cre17.g711457","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g712200","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 23","protein_coding"
"Cre17.g712450","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF1767)","protein_coding"
"Cre17.g718850","No alias","Chlamydomonas reinhardtii","replication protein A 1A","protein_coding"
"Cre17.g720261","No alias","Chlamydomonas reinhardtii","Putative serine esterase  family protein","protein_coding"
"Cre17.g720700","No alias","Chlamydomonas reinhardtii","ankyrin repeat family protein","protein_coding"
"Cre17.g722400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g726500","No alias","Chlamydomonas reinhardtii","origin recognition complex subunit 4","protein_coding"
"Cre17.g729901","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g730050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g730300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g732566","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g733800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g734050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g734250","No alias","Chlamydomonas reinhardtii","PB1 domain-containing protein tyrosine kinase","protein_coding"
"Cre17.g739050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g742400","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre17.g745947","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g746647","No alias","Chlamydomonas reinhardtii","pumilio 3","protein_coding"
"Cre17.g747397","No alias","Chlamydomonas reinhardtii","NIMA-related kinase 4","protein_coding"
"Cre24.g756047","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre26.g756847","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2008.3","No alias","Porphyridium purpureum","(at2g20830 : 86.7) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2015.8","No alias","Porphyridium purpureum","(at4g38890 : 95.9) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity, zinc ion binding, nucleic acid binding; INVOLVED IN: oxidation reduction, tRNA processing, metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 11364 Blast hits to 11268 proteins in 2588 species: Archae - 15; Bacteria - 7817; Metazoa - 496; Fungi - 531; Plants - 173; Viruses - 0; Other Eukaryotes - 2332 (source: NCBI BLink). & (reliability: 191.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2016.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2017.12","No alias","Porphyridium purpureum","(at3g28030 : 250.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 80.9) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2017.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2017.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.31","No alias","Porphyridium purpureum","(at4g39150 : 126.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G21510.1). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2031.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2036.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2036.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2048.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2048.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2054.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2058.3","No alias","Porphyridium purpureum","(at5g15920 : 374.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex.  SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2060.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2060.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.18","No alias","Porphyridium purpureum","(at3g18480 : 100.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast.  A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2062.8","No alias","Porphyridium purpureum","(at5g19850 : 156.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2064.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2071.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2076.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2079.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2083.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2086.5","No alias","Porphyridium purpureum","(at4g38470 : 207.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p17801|kpro_maize : 110.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2090.19","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2093.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2095.11","No alias","Porphyridium purpureum","(at3g20390 : 90.1) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.17","No alias","Porphyridium purpureum","(at2g42160 : 83.2) BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.23","No alias","Porphyridium purpureum","(at2g13440 : 734.0) glucose-inhibited division family A protein; FUNCTIONS IN: FAD binding; INVOLVED IN: tRNA processing, tRNA wobble uridine modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-inhibited division protein A-related (InterPro:IPR002218), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-inhibited division protein A (InterPro:IPR004416), Glucose-inhibited division protein A-related, conserved site (InterPro:IPR020595); Has 12829 Blast hits to 12787 proteins in 2525 species: Archae - 2; Bacteria - 6632; Metazoa - 144; Fungi - 175; Plants - 52; Viruses - 0; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2098.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2103.1","No alias","Porphyridium purpureum","(at3g11900 : 104.0) encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.; aromatic and neutral transporter 1 (ANT1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4625 Blast hits to 4600 proteins in 287 species: Archae - 17; Bacteria - 63; Metazoa - 1652; Fungi - 791; Plants - 1313; Viruses - 9; Other Eukaryotes - 780 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2104.12","No alias","Porphyridium purpureum","(at5g09550 : 417.0) GDP dissociation inhibitor family protein / Rab GTPase activator family protein; FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1326 Blast hits to 1219 proteins in 259 species: Archae - 2; Bacteria - 4; Metazoa - 658; Fungi - 290; Plants - 182; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2104.18","No alias","Porphyridium purpureum","(at1g06820 : 596.0) Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene.; carotenoid isomerase (CRTISO); CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Carotene isomerase (InterPro:IPR014101); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT1G57770.1); Has 6522 Blast hits to 6439 proteins in 939 species: Archae - 207; Bacteria - 2788; Metazoa - 150; Fungi - 77; Plants - 203; Viruses - 0; Other Eukaryotes - 3097 (source: NCBI BLink). & (q2vex9|crtso_dauca : 585.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 1192.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2104.9","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2110.8","No alias","Porphyridium purpureum","(at5g44740 : 163.0) Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.; Y-family DNA polymerase H (POLH); CONTAINS InterPro DOMAIN/s: DNA polymerase eta (InterPro:IPR017061), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963); BEST Arabidopsis thaliana protein match is: DNA-directed DNA polymerases (TAIR:AT5G44750.1); Has 8088 Blast hits to 8015 proteins in 2292 species: Archae - 210; Bacteria - 5635; Metazoa - 500; Fungi - 401; Plants - 163; Viruses - 3; Other Eukaryotes - 1176 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2116.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2116.7","No alias","Porphyridium purpureum","(at1g71440 : 94.0) Encodes tubulin-folding cofactor E.  Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2122.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2130.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2139.16","No alias","Porphyridium purpureum","(at4g02460 : 155.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2150.13","No alias","Porphyridium purpureum","(at5g41150 : 195.0) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair  and yeast Rad1 proteins; ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); Has 503 Blast hits to 463 proteins in 204 species: Archae - 16; Bacteria - 0; Metazoa - 188; Fungi - 168; Plants - 53; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2152.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2176.1","No alias","Porphyridium purpureum","(at4g02070 : 315.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 162.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2180.3","No alias","Porphyridium purpureum","(at3g54460 : 302.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2186.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2194.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2194.13","No alias","Porphyridium purpureum","(at1g78090 : 175.0) homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases; trehalose-6-phosphate phosphatase (TPPB); CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G22210.1); Has 2381 Blast hits to 2375 proteins in 857 species: Archae - 41; Bacteria - 1374; Metazoa - 220; Fungi - 153; Plants - 455; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2194.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2239.3","No alias","Porphyridium purpureum","(at5g18640 : 122.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2262.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2271.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2273.3","No alias","Porphyridium purpureum","(at4g24400 : 218.0) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.; CBL-interacting protein kinase 8 (CIPK8); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, response to nitrate, root development, response to glucose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G35410.1); Has 132609 Blast hits to 130467 proteins in 4740 species: Archae - 192; Bacteria - 15427; Metazoa - 49318; Fungi - 12831; Plants - 32044; Viruses - 538; Other Eukaryotes - 22259 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 211.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (gnl|cdd|68872 : 87.8) no description available & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2274.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2276.10","No alias","Porphyridium purpureum","(at4g27120 : 105.0) CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 14775 Blast hits to 8764 proteins in 778 species: Archae - 29; Bacteria - 1878; Metazoa - 5164; Fungi - 1447; Plants - 582; Viruses - 164; Other Eukaryotes - 5511 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2281.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2284.16","No alias","Porphyridium purpureum","(at1g59760 : 812.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2296.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2296.3","No alias","Porphyridium purpureum","(at3g59410 : 150.0) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2298.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2310.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2341.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2342.1","No alias","Porphyridium purpureum","(at5g01850 : 90.1) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 131148 Blast hits to 129643 proteins in 5072 species: Archae - 162; Bacteria - 15033; Metazoa - 49603; Fungi - 12189; Plants - 33321; Viruses - 522; Other Eukaryotes - 20318 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2345.3","No alias","Porphyridium purpureum","(at1g13980 : 171.0) Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.; GNOM (GN); FUNCTIONS IN: protein homodimerization activity, GTP:GDP antiporter activity; INVOLVED IN: in 13 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: GNOM-like 1 (TAIR:AT5G39500.1). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2348.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2349.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2350.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2356.2","No alias","Porphyridium purpureum","(at1g48950 : 83.6) C3HC zinc finger-like ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935); BEST Arabidopsis thaliana protein match is: IAP-like protein 1 (TAIR:AT1G17210.1); Has 249 Blast hits to 238 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 80; Plants - 75; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2357.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2359.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2360.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2489.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.36","No alias","Porphyridium purpureum","(at5g06680 : 153.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2500.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2502.11","No alias","Porphyridium purpureum","(at3g15290 : 225.0) 3-hydroxyacyl-CoA dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase (InterPro:IPR022694); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 14531 Blast hits to 13544 proteins in 1840 species: Archae - 475; Bacteria - 9128; Metazoa - 588; Fungi - 237; Plants - 152; Viruses - 0; Other Eukaryotes - 3951 (source: NCBI BLink). & (q8w1l6|mfp_orysa : 119.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2502.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2504.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2510.1","No alias","Porphyridium purpureum","(at5g46910 : 200.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2521.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2663.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2673.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2706.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2714.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3388.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3395.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3397.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3401.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3405.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3406.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3410.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3415.6","No alias","Porphyridium purpureum","(at1g80930 : 286.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3415.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.13","No alias","Porphyridium purpureum","(at5g03430 : 187.0) phosphoadenosine phosphosulfate (PAPS) reductase family protein; FUNCTIONS IN: transferase activity; INVOLVED IN: Mo-molybdopterin cofactor biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Molybdopterin binding (InterPro:IPR001453); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.35","No alias","Porphyridium purpureum","(at5g02280 : 98.2) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT1G51160.2); Has 567 Blast hits to 560 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 109; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_3426.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3426.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3427.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3428.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3432.5","No alias","Porphyridium purpureum","(at5g05740 : 81.3) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_3435.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3439.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3442.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3448.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3450.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3450.15","No alias","Porphyridium purpureum","(at1g66730 : 353.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 90.5) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3450.18","No alias","Porphyridium purpureum","(at5g57280 : 274.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3452.3","No alias","Porphyridium purpureum","(at1g55860 : 164.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3470.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3484.1","No alias","Porphyridium purpureum","(q7f0r1|png1_orysa : 221.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (at5g49570 : 215.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3490.10","No alias","Porphyridium purpureum","(at5g64380 : 306.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46275|f16p1_pea : 248.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3509.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3510.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3515.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3524.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3532.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3545.2","No alias","Porphyridium purpureum","(at4g36650 : 89.7) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_3546.2","No alias","Porphyridium purpureum","(at4g27680 : 237.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G53540.1); Has 30260 Blast hits to 27737 proteins in 3108 species: Archae - 1486; Bacteria - 10702; Metazoa - 4856; Fungi - 3534; Plants - 2690; Viruses - 34; Other Eukaryotes - 6958 (source: NCBI BLink). & (q96372|cdc48_capan : 152.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3550.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3562.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3576.1","No alias","Porphyridium purpureum","(at5g55310 : 481.0) Encodes one of two Arabidopsis type-I DNA topoisomerase I genes.  Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.; DNA topoisomerase 1 beta (TOP1BETA); FUNCTIONS IN: DNA topoisomerase type I activity; INVOLVED IN: DNA topological change; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type (InterPro:IPR013030), DNA topoisomerase I, DNA binding, eukaryotic-type (InterPro:IPR008336), DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010); BEST Arabidopsis thaliana protein match is: DNA topoisomerase I alpha (TAIR:AT5G55300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93119|top1_dauca : 401.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3585.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3597.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3601.3","No alias","Porphyridium purpureum","(at4g21470 : 110.0) Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN.; riboflavin kinase/FMN hydrolase (FMN/FHY); FUNCTIONS IN: riboflavin kinase activity, FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), Riboflavin kinase (InterPro:IPR015865), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G57440.1); Has 19964 Blast hits to 19956 proteins in 2653 species: Archae - 146; Bacteria - 15844; Metazoa - 398; Fungi - 526; Plants - 433; Viruses - 3; Other Eukaryotes - 2614 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3609.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3609.3","No alias","Porphyridium purpureum","(at3g51520 : 102.0) diacylglycerol acyltransferase family; FUNCTIONS IN: diacylglycerol O-acyltransferase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); Has 1280 Blast hits to 1264 proteins in 273 species: Archae - 0; Bacteria - 248; Metazoa - 568; Fungi - 161; Plants - 127; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3618.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3620.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3622.1","No alias","Porphyridium purpureum","(at3g13180 : 87.4) NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), NusB/RsmB/TIM44 (InterPro:IPR006027); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 10280 Blast hits to 10234 proteins in 2431 species: Archae - 377; Bacteria - 6832; Metazoa - 588; Fungi - 364; Plants - 311; Viruses - 0; Other Eukaryotes - 1808 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_3637.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3730.1","No alias","Porphyridium purpureum","(at4g23160 : 89.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3743.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_435.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_438.5","No alias","Porphyridium purpureum","(at2g25660 : 96.3) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_4403.11","No alias","Porphyridium purpureum","(at3g55070 : 206.0) LisH/CRA/RING-U-box domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 813 Blast hits to 810 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 347; Fungi - 254; Plants - 147; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4403.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4407.13","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_441.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4410.27","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_4412.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4417.3","No alias","Porphyridium purpureum","(at1g18260 : 98.6) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_4417.4","No alias","Porphyridium purpureum","(at1g18260 : 89.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4418.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4423.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4424.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_443.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4432.10","No alias","Porphyridium purpureum","(at5g54830 : 134.0) DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4432.17","No alias","Porphyridium purpureum","(q9zts1|sym_orysa : 671.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 661.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (reliability: 1322.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4435.1","No alias","Porphyridium purpureum","(at5g57160 : 191.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 155.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.12","No alias","Porphyridium purpureum","(at5g17410 : 115.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4442.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4446.17","No alias","Porphyridium purpureum","(at3g60740 : 221.0) Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization.; TITAN 1 (TTN1); CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4453.1","No alias","Porphyridium purpureum","(at1g02145 : 145.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4456.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4458.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4470.4","No alias","Porphyridium purpureum","(at4g12120 : 115.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 109.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4476.12","No alias","Porphyridium purpureum","(at5g60550 : 145.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7xqp4|sapk7_orysa : 114.0) Serine/threonine-protein kinase SAPK7 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 7) - Oryza sativa (Rice) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4479.1","No alias","Porphyridium purpureum","(at4g38250 : 118.0) Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 5006 Blast hits to 4918 proteins in 286 species: Archae - 16; Bacteria - 54; Metazoa - 1812; Fungi - 943; Plants - 1365; Viruses - 6; Other Eukaryotes - 810 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4488.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4491.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4516.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4516.7","No alias","Porphyridium purpureum","(at2g21370 : 268.0) Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.; xylulose kinase-1 (XK-1); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast, plastid, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_454.11","No alias","Porphyridium purpureum","(at2g16370 : 475.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene.  This is unique in Arabidopsis and protozoa.  Other organisms have independent genes for  this function.; thymidylate synthase 1 (THY-1); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 2 (TAIR:AT4G34570.1); Has 13474 Blast hits to 13433 proteins in 2607 species: Archae - 76; Bacteria - 8708; Metazoa - 513; Fungi - 424; Plants - 92; Viruses - 253; Other Eukaryotes - 3408 (source: NCBI BLink). & (q2qrx6|drts_orysa : 473.0) Putative bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Oryza sativa (Rice) & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4544.1","No alias","Porphyridium purpureum","(at4g39460 : 143.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (p29518|bt1_maize : 89.7) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.5","No alias","Porphyridium purpureum","(at2g22870 : 95.5) embryo defective 2001 (EMB2001); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis,  YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G11480.1); Has 7972 Blast hits to 7922 proteins in 2512 species: Archae - 103; Bacteria - 5806; Metazoa - 98; Fungi - 230; Plants - 215; Viruses - 0; Other Eukaryotes - 1520 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_464.7","No alias","Porphyridium purpureum","(at3g62040 : 83.6) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2327 Blast hits to 2327 proteins in 521 species: Archae - 22; Bacteria - 785; Metazoa - 0; Fungi - 147; Plants - 198; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_469.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_473.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_474.5","No alias","Porphyridium purpureum","(at5g35980 : 192.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 109.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_480.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_482.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_488.4","No alias","Porphyridium purpureum","(at5g10460 : 180.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 (InterPro:IPR006356); Has 4117 Blast hits to 4117 proteins in 1113 species: Archae - 73; Bacteria - 2243; Metazoa - 198; Fungi - 54; Plants - 37; Viruses - 0; Other Eukaryotes - 1512 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_489.7","No alias","Porphyridium purpureum","(at4g38200 : 291.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast hits to 2618 proteins in 244 species: Archae - 0; Bacteria - 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_497.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_499.4","No alias","Porphyridium purpureum","(at1g65540 : 290.0) LETM1-like protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G59820.1); Has 7253 Blast hits to 6279 proteins in 764 species: Archae - 76; Bacteria - 1084; Metazoa - 3311; Fungi - 589; Plants - 471; Viruses - 24; Other Eukaryotes - 1698 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_510.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_514.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_516.10","No alias","Porphyridium purpureum","(at1g80780 : 280.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: RNA modification; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G32070.1). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_516.7","No alias","Porphyridium purpureum","(at1g27840 : 87.4) Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity.; ATCSA-1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G19750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_524.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_527.23","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_527.27","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_528.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_538.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_540.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_542.5","No alias","Porphyridium purpureum","(at1g45160 : 338.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126537 Blast hits to 124799 proteins in 4593 species: Archae - 166; Bacteria - 15103; Metazoa - 47179; Fungi - 12961; Plants - 29525; Viruses - 530; Other Eukaryotes - 21073 (source: NCBI BLink). & (p47997|g11a_orysa : 176.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_544.4","No alias","Porphyridium purpureum","(at1g28060 : 160.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_544.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_552.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_557.1","No alias","Porphyridium purpureum","(at5g38110 : 189.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone,  ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_560.1","No alias","Porphyridium purpureum","(at4g03240 : 84.3) Encodes AtFH, a frataxin homolog.  Frataxin is required for the biogenesis of mitochondria in different organisms.  AtFH knock-out mutants are lethal.  Required for full activity of mitochondrial Fe-S proteins.  Deficiency of AtFH induces oxidative stress.; frataxin homolog (FH); CONTAINS InterPro DOMAIN/s: Frataxin (InterPro:IPR017789), Frataxin conserved site (InterPro:IPR020895), Frataxin-like (InterPro:IPR002908); Has 1148 Blast hits to 1148 proteins in 551 species: Archae - 0; Bacteria - 783; Metazoa - 128; Fungi - 127; Plants - 48; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_560.13","No alias","Porphyridium purpureum","(at4g31480 : 768.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (reliability: 1536.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_565.1","No alias","Porphyridium purpureum","(at5g07770 : 80.1) Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_568.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_582.6","No alias","Porphyridium purpureum","(at5g49970 : 146.0) encodes the bifunctional pyridoxine (pyridoxamine) 5í-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_588.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_589.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_596.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_599.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_604.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_623.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_625.1","No alias","Porphyridium purpureum","(at2g38770 : 95.1) EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_629.4","No alias","Porphyridium purpureum","(at4g04540 : 144.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (CRK39); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (TAIR:AT4G04570.1); Has 125664 Blast hits to 124100 proteins in 4695 species: Archae - 110; Bacteria - 14484; Metazoa - 46060; Fungi - 11047; Plants - 34830; Viruses - 446; Other Eukaryotes - 18687 (source: NCBI BLink). & (q8lkz1|nork_pea : 103.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_635.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_636.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_653.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_659.1","No alias","Porphyridium purpureum","(at5g57040 : 125.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_667.6","No alias","Porphyridium purpureum","(at1g09760 : 110.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_693.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_693.9","No alias","Porphyridium purpureum","(at4g31050 : 174.0) Biotin/lipoate A/B protein ligase family; FUNCTIONS IN: lipoyltransferase activity, octanoyltransferase activity, catalytic activity; INVOLVED IN: protein modification process, lipoate biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octanoyltransferase, conserved site (InterPro:IPR020605), Octanoyltransferase (InterPro:IPR000544), Biotin/lipoate A/B protein ligase (InterPro:IPR004143); BEST Arabidopsis thaliana protein match is: Biotin/lipoate A/B protein ligase family (TAIR:AT1G47578.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_724.7","No alias","Porphyridium purpureum","(at1g14790 : 350.0) Encodes RNA-dependent RNA polymerase.   While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_730.1","No alias","Porphyridium purpureum","(at1g08130 : 533.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 84.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1066.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_752.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_753.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_765.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_786.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_798.1","No alias","Porphyridium purpureum","(at1g50030 : 714.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 170.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 1428.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_838.1","No alias","Porphyridium purpureum","(at2g24170 : 84.3) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_926.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000037.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.231","No alias","Cyanophora paradoxa","(o81263|kith_orysa : 138.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 136.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000058.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.82","No alias","Cyanophora paradoxa","(at3g53090 : 286.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 7 (UPL7); CONTAINS InterPro DOMAIN/s: HECT (InterPro:IPR000569), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: ubiquitin protein ligase 6 (TAIR:AT3G17205.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.101","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.122","No alias","Cyanophora paradoxa","(q9xfg3|tbg_phypa : 385.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at5g05620 : 376.0) Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin  complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.155","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.230","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.255","No alias","Cyanophora paradoxa","(at5g65720 : 255.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.36","No alias","Cyanophora paradoxa","(at1g16590 : 87.4) putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV7; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); Has 307 Blast hits to 307 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 86; Plants - 49; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.99","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000123.19","No alias","Cyanophora paradoxa","(at4g19670 : 110.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1); Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1; Bacteria - 6; Metazoa - 1257; Fungi - 660; Plants - 920; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000133.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000142.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000142.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.105","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.164","No alias","Cyanophora paradoxa","(at2g16440 : 634.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 294.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.81","No alias","Cyanophora paradoxa","(at5g05970 : 123.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000189.50","No alias","Cyanophora paradoxa","(at2g47980 : 176.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000190.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000190.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000190.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000194.48","No alias","Cyanophora paradoxa","(at5g07630 : 130.0) lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.58","No alias","Cyanophora paradoxa","(at3g15610 : 290.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.79","No alias","Cyanophora paradoxa","(at1g12910 : 429.0) Encodes a protein with similarity to the petunia WD repeat protein an11.; ANTHOCYANIN11 (ATAN11); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G26640.1); Has 4731 Blast hits to 4446 proteins in 351 species: Archae - 6; Bacteria - 291; Metazoa - 1848; Fungi - 1200; Plants - 767; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000219.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.37","No alias","Cyanophora paradoxa","(at2g46110 : 135.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; ketopantoate hydroxymethyltransferase 1 (KPHMT1); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT3G61530.2); Has 7565 Blast hits to 7565 proteins in 2036 species: Archae - 128; Bacteria - 4147; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3087 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000237.42","No alias","Cyanophora paradoxa","(o48653|dpola_orysa : 568.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 554.0) Encodes the putative catalytic subunit of the DNA polymerase alpha.  Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.178","No alias","Cyanophora paradoxa","(q9lre5|dpod2_orysa : 317.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at2g42120 : 311.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.184","No alias","Cyanophora paradoxa","(at5g35750 : 124.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 100.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.188","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000246.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.65","No alias","Cyanophora paradoxa","(at1g25682 : 230.0) Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572)  (TAIR:AT1G25988.1); Has 717 Blast hits to 715 proteins in 213 species: Archae - 0; Bacteria - 6; Metazoa - 235; Fungi - 232; Plants - 115; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.119","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.111","No alias","Cyanophora paradoxa","(at3g49660 : 123.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93340|gblp_nicpl : 114.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000269.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.87","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000334.17","No alias","Cyanophora paradoxa","(at3g49660 : 129.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p25387|gblp_chlre : 128.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000342.14","No alias","Cyanophora paradoxa","(at1g21980 : 133.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 110.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000342.29","No alias","Cyanophora paradoxa","(at3g06910 : 121.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity.; UB-like protease 1A (ULP1A); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1394 Blast hits to 1393 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 593; Fungi - 272; Plants - 373; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000342.9","No alias","Cyanophora paradoxa","(at5g41880 : 330.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000344.15","No alias","Cyanophora paradoxa","(at3g57030 : 98.2) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.15","No alias","Cyanophora paradoxa","(at5g54260 : 369.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.46","No alias","Cyanophora paradoxa","(q41745|lpat_maize : 133.0) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC 2.3.1.51) (Phospholipid synthesis protein 1) - Zea mays (Maize) & (at3g57650 : 126.0) Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.; lysophosphatidyl acyltransferase 2 (LPAT2); FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 3 (TAIR:AT1G51260.1); Has 1646 Blast hits to 1643 proteins in 516 species: Archae - 0; Bacteria - 639; Metazoa - 536; Fungi - 213; Plants - 138; Viruses - 2; Other Eukaryotes - 118 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000367.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.39","No alias","Cyanophora paradoxa","(at2g02560 : 617.0) Arabidopsis thaliana homolog of human  CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.; cullin-associated and neddylation dissociated (CAND1); FUNCTIONS IN: binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), TATA-binding protein interacting (TIP20) (InterPro:IPR013932); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.42","No alias","Cyanophora paradoxa","(at3g27060 : 431.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (p49730|rir2_tobac : 427.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000385.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000388.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.18","No alias","Cyanophora paradoxa","(at4g29510 : 402.0) Has arginine N-methyltransferase activity. Modifies AtMBD7.; arginine methyltransferase 11 (PRMT11); FUNCTIONS IN: protein-arginine N-methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2778 Blast hits to 2730 proteins in 659 species: Archae - 61; Bacteria - 655; Metazoa - 1180; Fungi - 241; Plants - 326; Viruses - 1; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000405.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000478.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000489.16","No alias","Cyanophora paradoxa","(at4g02070 : 188.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 111.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000489.7","No alias","Cyanophora paradoxa","(at2g39090 : 151.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.80","No alias","Cyanophora paradoxa","(q9zsv1|parp1_maize : 162.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Zea mays (Maize) & (at2g31320 : 158.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000523.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000545.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000551.12","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000551.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.19","No alias","Cyanophora paradoxa","(at2g19330 : 115.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000605.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.44","No alias","Cyanophora paradoxa","(at5g16270 : 116.0) Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin.; sister chromatid cohesion 1 protein 4 (SYN4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion; LOCATED IN: nuclear chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal (InterPro:IPR006909), Rad21/Rec8 like protein, N-terminal (InterPro:IPR006910); BEST Arabidopsis thaliana protein match is: Rad21/Rec8-like family protein (TAIR:AT3G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.8","No alias","Cyanophora paradoxa","(p28734|aatc_dauca : 404.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 397.0) Encodes the chloroplastic isozyme of aspartate aminotransferase.  Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000624.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000632.8","No alias","Cyanophora paradoxa","(at5g38360 : 102.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2073 Blast hits to 2071 proteins in 500 species: Archae - 14; Bacteria - 1119; Metazoa - 146; Fungi - 52; Plants - 356; Viruses - 0; Other Eukaryotes - 386 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000663.38","No alias","Cyanophora paradoxa","(at4g04880 : 119.0) adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000691.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.21","No alias","Cyanophora paradoxa","(at4g02730 : 164.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (p93107|pf20_chlre : 141.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.34","No alias","Cyanophora paradoxa","(at3g22980 : 385.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (o23755|ef2_betvu : 240.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.42","No alias","Cyanophora paradoxa","(at3g59870 : 150.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.58","No alias","Cyanophora paradoxa","(at1g62430 : 297.0) Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis.; CDP-diacylglycerol synthase 1 (CDS1); CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 2 (TAIR:AT4G22340.1); Has 7098 Blast hits to 7086 proteins in 2534 species: Archae - 0; Bacteria - 4982; Metazoa - 186; Fungi - 135; Plants - 138; Viruses - 0; Other Eukaryotes - 1657 (source: NCBI BLink). & (o04940|cds1_soltu : 285.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.14","No alias","Cyanophora paradoxa","(at5g59560 : 84.7) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.; SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of circadian rhythm, red, far-red light phototransduction; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sensitivity To Red Light Reduced-like, SRR1 (InterPro:IPR012942); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.46","No alias","Cyanophora paradoxa","(at2g27170 : 471.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1); Has 158776 Blast hits to 77347 proteins in 3496 species: Archae - 2059; Bacteria - 28403; Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses - 706; Other Eukaryotes - 40940 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000754.31","No alias","Cyanophora paradoxa","(at1g08130 : 306.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 80.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000754.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000764.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000767.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.15","No alias","Cyanophora paradoxa","(at4g32700 : 299.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.19","No alias","Cyanophora paradoxa","(at5g57160 : 87.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.41","No alias","Cyanophora paradoxa","(at1g27880 : 173.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.49","No alias","Cyanophora paradoxa","(at1g26830 : 199.0) Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin   protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.; cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.19","No alias","Cyanophora paradoxa","(at5g48570 : 102.0) FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43207|fkb70_wheat : 100.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.32","No alias","Cyanophora paradoxa","(at4g31150 : 141.0) endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000796.13","No alias","Cyanophora paradoxa","(at1g66730 : 85.5) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (reliability: 171.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000802.10","No alias","Cyanophora paradoxa","(at3g45240 : 156.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 1 (GRIK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 2 (TAIR:AT5G60550.1). & (q6x4a2|cipk1_orysa : 139.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.15","No alias","Cyanophora paradoxa","(at5g58230 : 455.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000808.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000821.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000823.19","No alias","Cyanophora paradoxa","(at2g06510 : 172.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000842.17","No alias","Cyanophora paradoxa","(at5g65290 : 97.1) LMBR1-like membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); Has 378 Blast hits to 361 proteins in 164 species: Archae - 0; Bacteria - 1; Metazoa - 119; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.2","No alias","Cyanophora paradoxa","(at3g26560 : 568.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000849.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000849.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000851.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.33","No alias","Cyanophora paradoxa","(p25387|gblp_chlre : 151.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (at3g49660 : 140.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000870.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.19","No alias","Cyanophora paradoxa","(at4g03430 : 278.0) Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.; EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN: binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold, response to abiotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Ubiquitin supergroup (InterPro:IPR019955), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has 3874 Blast hits to 2098 proteins in 386 species: Archae - 98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants - 656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000889.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.17","No alias","Cyanophora paradoxa","(at5g06160 : 337.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate.  Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000912.20","No alias","Cyanophora paradoxa","(at2g31260 : 341.0) Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components.  Mutant shows accelerated bolting and senescence.; autophagy 9 (APG9); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 9 (InterPro:IPR007241); Has 489 Blast hits to 477 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 166; Plants - 51; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000923.10","No alias","Cyanophora paradoxa","(at2g36390 : 226.0) Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues.; starch branching enzyme 2.1 (SBE2.1); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Immunoglobulin-like fold (InterPro:IPR013783), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.2 (TAIR:AT5G03650.1); Has 15972 Blast hits to 15848 proteins in 2360 species: Archae - 125; Bacteria - 12355; Metazoa - 437; Fungi - 446; Plants - 1422; Viruses - 0; Other Eukaryotes - 1187 (source: NCBI BLink). & (q08047|glgb_maize : 224.0) 1,4-alpha-glucan branching enzyme IIB, chloroplast precursor (EC 2.4.1.18) (Starch branching enzyme IIB) (Q-enzyme) - Zea mays (Maize) & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000939.14","No alias","Cyanophora paradoxa","(at5g20520 : 188.0) Encodes a Bem46-like protein.  WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).; WAVY GROWTH 2 (WAV2); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: root development; LOCATED IN: organelle inner membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G13610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.22","No alias","Cyanophora paradoxa","(at1g77180 : 322.0) Encodes a putative transcriptional factor.  Shows transcriptional activator activity in yeast.  Involved in response to abscisic acid, salt and osmotic stress.; SKIP; CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP (InterPro:IPR017862), SKI-interacting protein SKIP, SNW domain (InterPro:IPR004015). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.33","No alias","Cyanophora paradoxa","(at5g67530 : 196.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000950.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.31","No alias","Cyanophora paradoxa","(at1g08260 : 86.3) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000980.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000983.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000984.18","No alias","Cyanophora paradoxa","(at5g15920 : 305.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex.  SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000989.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001003.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001021.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.6","No alias","Cyanophora paradoxa","(at3g55200 : 185.0) Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001027.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001027.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001038.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001041.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001056.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001073.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.22","No alias","Cyanophora paradoxa","(at2g17790 : 429.0) Encodes a protein with similarity to yeast VPS35 which encodes a component of the retromer involved in retrograde endosomal transport. Mutants partially suppress the loss of VTI11 function in Arabidopsis and restores gravitropism in the double mutant.; VPS35 homolog A (VPS35A); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog B (TAIR:AT1G75850.1); Has 618 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 224; Plants - 73; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001086.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.5","No alias","Cyanophora paradoxa","(at5g67220 : 134.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, oxidation reduction, tRNA processing, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269), tRNA-dihydrouridine synthase, conserved site (InterPro:IPR018517); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G49640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001094.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001098.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001107.10","No alias","Cyanophora paradoxa","(at1g67630 : 106.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001127.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001128.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001128.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.10","No alias","Cyanophora paradoxa","(at5g51300 : 295.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.12","No alias","Cyanophora paradoxa","(at4g38740 : 131.0) Encodes cytosolic cyclophilin ROC1.; rotamase CYP 1 (ROC1); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, response to cadmium ion, signal transduction; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16514 Blast hits to 16480 proteins in 2670 species: Archae - 108; Bacteria - 6825; Metazoa - 2927; Fungi - 1383; Plants - 1289; Viruses - 4; Other Eukaryotes - 3978 (source: NCBI BLink). & (p24525|cyph_brana : 129.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Brassica napus (Rape) & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.43","No alias","Cyanophora paradoxa","(at5g52910 : 104.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.10","No alias","Cyanophora paradoxa","(at2g44900 : 135.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.15","No alias","Cyanophora paradoxa","(at5g28740 : 754.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 1508.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001208.11","No alias","Cyanophora paradoxa","(at3g63520 : 206.0) Encodes a protein with 9-<i>cis</i>-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including &#946;-carotene, lutein, zeaxanthin, and all-<i>trans</i>-violaxanthin.  When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial.  The enzyme did not cleave as efficiently carotenoids containing 9-<i>cis</i>-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001215.7","No alias","Cyanophora paradoxa","(at5g35750 : 125.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 98.2) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001224.8","No alias","Cyanophora paradoxa","(at3g18524 : 614.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 591.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001278.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001299.12","No alias","Cyanophora paradoxa","(at4g31400 : 91.7) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an  N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7  temperature-sensitive mutation.  Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001302.6","No alias","Cyanophora paradoxa","(at3g25100 : 125.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001304.2","No alias","Cyanophora paradoxa","(at5g43530 : 228.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001333.30","No alias","Cyanophora paradoxa","(at1g04730 : 146.0) Necessary for sister chromatid cohesion. Acts in synergy with ETG1.; CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: sister chromatid cohesion; LOCATED IN: replication fork; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: replication factor C1 (TAIR:AT5G22010.1); Has 4018 Blast hits to 4006 proteins in 709 species: Archae - 400; Bacteria - 666; Metazoa - 673; Fungi - 766; Plants - 379; Viruses - 21; Other Eukaryotes - 1113 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001339.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001371.4","No alias","Cyanophora paradoxa","(at3g59410 : 98.6) GCN2; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001372.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001372.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001372.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001376.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001384.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001384.5","No alias","Cyanophora paradoxa","(q9sbw3|pp2a4_orysa : 503.0) Serine/threonine-protein phosphatase PP2A-4 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (at1g10430 : 498.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G59830.1); Has 6751 Blast hits to 6569 proteins in 471 species: Archae - 80; Bacteria - 183; Metazoa - 2378; Fungi - 1410; Plants - 970; Viruses - 5; Other Eukaryotes - 1725 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001415.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001471.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001487.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001501.3","No alias","Cyanophora paradoxa","(at1g04510 : 193.0) Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19.  Associated with the MOS4-Associated Complex (MAC).  Involved in plant innate immunity.; MOS4-associated  complex 3A (MAC3A); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: response to cadmium ion, defense response to bacterium; LOCATED IN: nucleolus, nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated  complex 3B (TAIR:AT2G33340.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001537.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001542.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.7","No alias","Cyanophora paradoxa","(q9lre6|dpod1_orysa : 1007.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1000.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 2000.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001574.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001574.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001590.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001623.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001668.8","No alias","Cyanophora paradoxa","(at1g54370 : 98.6) sodium hydrogen exchanger 5 (NHX5); FUNCTIONS IN: sodium:hydrogen antiporter activity, sodium ion transmembrane transporter activity; INVOLVED IN: lithium ion transport, sodium ion transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ exchanger, subfamily (InterPro:IPR004709), Na+/H+ exchanger, isoform 5/6/8, conserved region (InterPro:IPR018409), Cation/H+ exchanger, conserved region (InterPro:IPR018422), Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 6 (TAIR:AT1G79610.1); Has 6647 Blast hits to 6641 proteins in 1771 species: Archae - 114; Bacteria - 4554; Metazoa - 890; Fungi - 160; Plants - 421; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001718.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001718.3","No alias","Cyanophora paradoxa","(at5g57160 : 184.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 96.7) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020510.158","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.14","No alias","Cyanophora paradoxa","(at1g04020 : 90.1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020544.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020544.9","No alias","Cyanophora paradoxa","(at3g28030 : 241.0) Required for repair of pyrimidine-pyrimidinone (6-4) dimers.; ULTRAVIOLET HYPERSENSITIVE 3 (UVH3); FUNCTIONS IN: protein binding, nuclease activity; INVOLVED IN: DNA repair, response to UV-B, response to heat, non-photoreactive DNA repair; LOCATED IN: nucleus; EXPRESSED IN: stem, leaf whorl, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), Xeroderma pigmentosum group G protein (InterPro:IPR001044), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5&apos;-3&apos; exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G01880.1); Has 8115 Blast hits to 5779 proteins in 624 species: Archae - 528; Bacteria - 414; Metazoa - 2441; Fungi - 1496; Plants - 576; Viruses - 71; Other Eukaryotes - 2589 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.141","No alias","Cyanophora paradoxa","(q43266|pcna_maize : 272.0) Proliferating cell nuclear antigen (PCNA) - Zea mays (Maize) & (at1g07370 : 265.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.145","No alias","Cyanophora paradoxa","(at3g54670 : 678.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (reliability: 1356.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.146","No alias","Cyanophora paradoxa","(at1g07350 : 106.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.230","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.231","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.269","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.55","No alias","Cyanophora paradoxa","(at4g03120 : 93.6) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.122","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.143","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.77","No alias","Cyanophora paradoxa","(at1g44900 : 595.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 207.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1190.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.78","No alias","Cyanophora paradoxa","(at2g22310 : 145.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.44","No alias","Cyanophora paradoxa","(at3g27710 : 223.0) ARIADNE 3 (ARI3); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 3131 Blast hits to 3105 proteins in 234 species: Archae - 0; Bacteria - 4; Metazoa - 1303; Fungi - 627; Plants - 676; Viruses - 17; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.91","No alias","Cyanophora paradoxa","(at1g53390 : 148.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 358264 Blast hits to 329272 proteins in 3990 species: Archae - 6355; Bacteria - 285632; Metazoa - 9572; Fungi - 6250; Plants - 5450; Viruses - 13; Other Eukaryotes - 44992 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 118.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020572.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.107","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.7","No alias","Cyanophora paradoxa","(at5g56580 : 205.0) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.; MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 205.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020616.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.115","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.12","No alias","Cyanophora paradoxa","(at5g64630 : 142.0) Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems.  In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively.  Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 2 (FAS2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of histone chaperone HIRA (TAIR:AT3G44530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.5","No alias","Cyanophora paradoxa","(at2g31865 : 127.0) poly(ADP-ribose) glycohydrolase 2 (PARG2); FUNCTIONS IN: poly(ADP-ribose) glycohydrolase activity; INVOLVED IN: defense response to fungus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: Poly (ADP-ribose) glycohydrolase (PARG) (TAIR:AT2G31870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.26","No alias","Cyanophora paradoxa","(at3g02920 : 90.9) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020685.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020685.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020703.10","No alias","Cyanophora paradoxa","(at2g20580 : 598.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020704.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.120","No alias","Cyanophora paradoxa","(at2g31030 : 92.4) OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020710.127","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.65","No alias","Cyanophora paradoxa","(at2g23310 : 204.0) Encodes AtRER1C1, a Golgi membrane protein involved in returning the molecules that are exported from the endoplasmic reticulum (ER) to the Golgi apparatus back to the ER (a mechanism known as retrieval).  There are two Arabidopsis homologues of AtRERC1: AtRER1A and AtRER1B.; ATRER1C1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: maintenance of protein location; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 509 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 147; Plants - 127; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020713.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.99","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020734.52","No alias","Cyanophora paradoxa","(at3g16785 : 125.0) Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins.  This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains.  Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation.; phospholipase D P1 (PLDP1); CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Pleckstrin homology-type (InterPro:IPR011993), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P2 (TAIR:AT3G05630.1); Has 3214 Blast hits to 1855 proteins in 548 species: Archae - 2; Bacteria - 1049; Metazoa - 509; Fungi - 676; Plants - 827; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (p93844|plda2_orysa : 85.9) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) - Oryza sativa (Rice) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.47","No alias","Cyanophora paradoxa","(p24847|dapa2_wheat : 300.0) Dihydrodipicolinate synthase 2, chloroplast precursor (EC 4.2.1.52) (DHDPS 2) - Triticum aestivum (Wheat) & (at2g45440 : 295.0) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.; dihydrodipicolinate synthase (DHDPS2); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase 1 (TAIR:AT3G60880.2); Has 13334 Blast hits to 13334 proteins in 2656 species: Archae - 353; Bacteria - 9459; Metazoa - 101; Fungi - 305; Plants - 96; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020786.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020800.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020800.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.82","No alias","Cyanophora paradoxa","(at3g49660 : 126.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (o24076|gblp_medsa : 119.0) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020801.83","No alias","Cyanophora paradoxa","(at3g49660 : 138.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p49027|gblp_orysa : 132.0) Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020816.12","No alias","Cyanophora paradoxa","(at5g03070 : 113.0) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.; importin alpha isoform 9 (IMPA-9); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 6 (TAIR:AT1G02690.2); Has 2139 Blast hits to 1862 proteins in 255 species: Archae - 0; Bacteria - 2; Metazoa - 1001; Fungi - 275; Plants - 485; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink). & (q71vm4|ima1a_orysa : 85.5) Importin alpha-1a subunit - Oryza sativa (Rice) & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020824.1","No alias","Cyanophora paradoxa","(at1g10600 : 121.0) associated molecule with the SH3 domain of STAM 2 (AMSH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1117 Blast hits to 1115 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 409; Fungi - 306; Plants - 280; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.11","No alias","Cyanophora paradoxa","(at1g18610 : 144.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39610|dyha_chlre : 90.9) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020830.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.29","No alias","Cyanophora paradoxa","(at5g23080 : 173.0) Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and  SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA  binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1.; TOUGH (TGH); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: multicellular organismal development, phloem or xylem histogenesis, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1604 (InterPro:IPR011666), SWAP/Surp (InterPro:IPR000061); Has 34900 Blast hits to 18983 proteins in 949 species: Archae - 12; Bacteria - 1329; Metazoa - 18979; Fungi - 3127; Plants - 2236; Viruses - 165; Other Eukaryotes - 9052 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.68","No alias","Cyanophora paradoxa","(at1g67320 : 337.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020849.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020850.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020875.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020875.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.41","No alias","Cyanophora paradoxa","(at5g02820 : 489.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020902.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020909.3","No alias","Cyanophora paradoxa","(at3g04810 : 212.0) Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 2 (NEK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 3 (TAIR:AT5G28290.1); Has 124376 Blast hits to 122221 proteins in 4182 species: Archae - 113; Bacteria - 14280; Metazoa - 45892; Fungi - 12262; Plants - 30619; Viruses - 487; Other Eukaryotes - 20723 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 129.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.37","No alias","Cyanophora paradoxa","(at1g54510 : 160.0) Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2). & (q5qn75|m2k1_orysa : 111.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.49","No alias","Cyanophora paradoxa","(p42347|pi3k1_soybn : 116.0) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean) & (at1g60490 : 114.0) Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses.; vacuolar protein sorting 34 (VPS34); FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis; LOCATED IN: phosphoinositide 3-kinase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Phosphoinositide 3-kinase, accessory (PIK) domain (InterPro:IPR001263), Phosphoinositide 3-kinase, C2 (InterPro:IPR002420), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Protein kinase-like domain (InterPro:IPR011009), Phosphatidylinositol Kinase (InterPro:IPR015433), Phosphatidylinositol 3-kinase, Vps34 type (InterPro:IPR008290), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G49340.1); Has 3550 Blast hits to 3392 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 1514; Fungi - 819; Plants - 335; Viruses - 4; Other Eukaryotes - 878 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020918.5","No alias","Cyanophora paradoxa","(at5g44635 : 634.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 243.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020918.7","No alias","Cyanophora paradoxa","(at4g17895 : 114.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020934.35","No alias","Cyanophora paradoxa","(at3g20020 : 210.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.28","No alias","Cyanophora paradoxa","(at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021012.34","No alias","Cyanophora paradoxa","(at5g51280 : 653.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 246.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021012.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021013.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021017.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021017.29","No alias","Cyanophora paradoxa","(at5g22010 : 251.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021037.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021072.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021098.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.4","No alias","Cyanophora paradoxa","(at3g48150 : 429.0) anaphase-promoting complex or cyclosome subunit; anaphase-promoting complex subunit 8 (APC8); FUNCTIONS IN: binding; INVOLVED IN: cell cycle, regulation of mitotic metaphase/anaphase transition; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Cdc23 (InterPro:IPR007192), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 14789 Blast hits to 8989 proteins in 1164 species: Archae - 889; Bacteria - 6197; Metazoa - 2204; Fungi - 825; Plants - 603; Viruses - 0; Other Eukaryotes - 4071 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021137.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021217.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.27","No alias","Cyanophora paradoxa","(at4g20850 : 335.0) Tripeptidyl Peptidase II. Ser protease  that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.; tripeptidyl peptidase ii (TPP2); FUNCTIONS IN: tripeptidyl-peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8A, tripeptidyl peptidase II (InterPro:IPR022229); Has 6394 Blast hits to 6195 proteins in 1270 species: Archae - 226; Bacteria - 4362; Metazoa - 666; Fungi - 272; Plants - 126; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021234.30","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021238.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021254.39","No alias","Cyanophora paradoxa","(at5g59440 : 149.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of  263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021281.39","No alias","Cyanophora paradoxa","(at1g13700 : 110.0) 6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021312.11","No alias","Cyanophora paradoxa","(p25011|ccnb1_soybn : 141.0) G2/mitotic-specific cyclin S13-6 (B-like cyclin) - Glycine max (Soybean) & (at4g35620 : 135.0) Cyclin B2;2 (CYCB2;2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;1 (TAIR:AT2G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021312.53","No alias","Cyanophora paradoxa","(at5g22770 : 587.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021319.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.67","No alias","Cyanophora paradoxa","(at2g29570 : 310.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (o82134|pcna_pea : 310.0) Proliferating cell nuclear antigen - Pisum sativum (Garden pea) & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021326.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021332.15","No alias","Cyanophora paradoxa","(at5g49570 : 218.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7f0r1|png1_orysa : 217.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021339.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.19","No alias","Cyanophora paradoxa","(at2g31870 : 129.0) mutant has Long free-running circadian period; Poly (ADP-ribose) Glycohydrolase; Sanskrit for 'bright' (TEJ); CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) glycohydrolase 2 (TAIR:AT2G31865.2); Has 549 Blast hits to 374 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 324; Fungi - 12; Plants - 58; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021348.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.50","No alias","Cyanophora paradoxa","(at3g28430 : 152.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021365.5","No alias","Cyanophora paradoxa","(q6f2y7|hs101_orysa : 231.0) Heat shock protein 101 - Oryza sativa (Rice) & (at1g74310 : 228.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family.  Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101.  AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021433.26","No alias","Cyanophora paradoxa","(at2g26430 : 218.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021434.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.13","No alias","Cyanophora paradoxa","(at2g26990 : 239.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021462.13","No alias","Cyanophora paradoxa","(at3g54610 : 310.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis.  It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG.  In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been  previously acetylated on K9 both serve as excellent substrates  for HAG1-catalyzed acetylation. However, prior acetylation  of H3 lysine 14 blocks radioactive acetylation of the  peptide by HAG1.  HAG1 is specific for  histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021462.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021494.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021502.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021502.2","No alias","Cyanophora paradoxa","(at3g49600 : 223.0) Encodes a ubiquitin-specific protease which catalyzes deubiquitination of   histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.; ubiquitin-specific protease 26 (UBP26); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: seed development; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase,  DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 7210 Blast hits to 6677 proteins in 263 species: Archae - 0; Bacteria - 2; Metazoa - 3696; Fungi - 1305; Plants - 848; Viruses - 3; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021517.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021525.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021525.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021531.14","No alias","Cyanophora paradoxa","(at3g27380 : 319.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion.  Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021569.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.32","No alias","Cyanophora paradoxa","(at3g08510 : 96.3) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.; phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021590.18","No alias","Cyanophora paradoxa","(at1g80600 : 223.0) Encodes HopW1-1-Interacting protein 1 (WIN1).  Interacts with the P. syringae effector HopW1-1.  WIN1 is a putative acetylornithine transaminase.  Modulates plant defenses against bacteria.  Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (p45621|gsa_soybn : 87.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Glycine max (Soybean) & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021616.10","No alias","Cyanophora paradoxa","(at4g25540 : 375.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).; homolog of DNA mismatch repair protein MSH3 (MSH3); CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14547 Blast hits to 13713 proteins in 2703 species: Archae - 153; Bacteria - 9793; Metazoa - 705; Fungi - 864; Plants - 451; Viruses - 3; Other Eukaryotes - 2578 (source: NCBI BLink). & (q9xgc9|msh2_maize : 143.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021621.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021719.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021719.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021760.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021795.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021796.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022104.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G020100","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.01G051400","No alias","Glycine max","ATP/GTP-binding protein family","protein_coding"
"Glyma.01G107000","No alias","Glycine max","Protein of unknown function (DUF3527)","protein_coding"
"Glyma.01G111300","No alias","Glycine max","defective in exine formation protein (DEX1)","protein_coding"
"Glyma.01G130900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G155300","No alias","Glycine max","kinesin-like calmodulin-binding protein (ZWICHEL)","protein_coding"
"Glyma.01G171900","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding"
"Glyma.01G172200","No alias","Glycine max","auxin-like 1 protein","protein_coding"
"Glyma.01G179300","No alias","Glycine max","Clathrin, heavy chain","protein_coding"
"Glyma.01G183100","No alias","Glycine max","SKU5  similar 17","protein_coding"
"Glyma.01G186600","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.01G188000","No alias","Glycine max","SET domain-containing protein","protein_coding"
"Glyma.01G203800","No alias","Glycine max","casein kinase II  beta chain 2","protein_coding"
"Glyma.01G233600","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding"
"Glyma.02G010400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G015500","No alias","Glycine max","P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain","protein_coding"
"Glyma.02G090332","No alias","Glycine max","DNA LIGASE 6","protein_coding"
"Glyma.02G091400","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Glyma.02G118800","No alias","Glycine max","cell division cycle 48B","protein_coding"
"Glyma.02G124700","No alias","Glycine max","senescence-related gene 1","protein_coding"
"Glyma.02G139500","No alias","Glycine max","formin homology 1","protein_coding"
"Glyma.02G146500","No alias","Glycine max","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein","protein_coding"
"Glyma.02G152300","No alias","Glycine max","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"Glyma.02G165100","No alias","Glycine max","ortholog of human splicing factor SC35","protein_coding"
"Glyma.02G169600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.02G198700","No alias","Glycine max","E2F transcription factor 3","protein_coding"
"Glyma.02G228400","No alias","Glycine max","Clathrin, heavy chain","protein_coding"
"Glyma.02G251700","No alias","Glycine max","nucleotide binding;protein binding","protein_coding"
"Glyma.02G256600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G273200","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.03G034900","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Glyma.03G073300","No alias","Glycine max","proteasome subunit PAB1","protein_coding"
"Glyma.03G076800","No alias","Glycine max","mRNA capping enzyme family protein","protein_coding"
"Glyma.03G090000","No alias","Glycine max","Actin binding Calponin homology (CH) domain-containing protein","protein_coding"
"Glyma.03G092700","No alias","Glycine max","glyceraldehyde-3-phosphate dehydrogenase of plastid 2","protein_coding"
"Glyma.03G102500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G107700","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.03G131000","No alias","Glycine max","calmodulin binding","protein_coding"
"Glyma.03G142500","No alias","Glycine max","Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein","protein_coding"
"Glyma.03G188100","No alias","Glycine max","Modifier of rudimentary (Mod(r)) protein","protein_coding"
"Glyma.03G220900","No alias","Glycine max","RNA binding;abscisic acid binding","protein_coding"
"Glyma.03G232200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G005900","No alias","Glycine max","methylthioadenosine nucleosidase 1","protein_coding"
"Glyma.04G027800","No alias","Glycine max","Walls Are Thin 1","protein_coding"
"Glyma.04G074700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G123800","No alias","Glycine max","alternative oxidase 1A","protein_coding"
"Glyma.04G156752","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G157800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.04G160700","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.04G165700","No alias","Glycine max","actin binding","protein_coding"
"Glyma.04G192600","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.04G200300","No alias","Glycine max","dual specificity protein phosphatase family protein","protein_coding"
"Glyma.04G204000","No alias","Glycine max","DNA-directed RNA polymerase family protein","protein_coding"
"Glyma.04G231700","No alias","Glycine max","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Glyma.04G253800","No alias","Glycine max","PHD finger family protein","protein_coding"
"Glyma.05G024500","No alias","Glycine max","Actin-binding FH2 (Formin Homology) protein","protein_coding"
"Glyma.05G028900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G060500","No alias","Glycine max","formyltetrahydrofolate deformylase, putative","protein_coding"
"Glyma.05G072300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G090400","No alias","Glycine max","Protein of unknown function, DUF547","protein_coding"
"Glyma.05G104100","No alias","Glycine max","Ribonuclease III family protein","protein_coding"
"Glyma.05G117000","No alias","Glycine max","Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains","protein_coding"
"Glyma.05G123500","No alias","Glycine max","cell division control 2","protein_coding"
"Glyma.05G143300","No alias","Glycine max","Metallo-hydrolase/oxidoreductase superfamily protein","protein_coding"
"Glyma.06G025800","No alias","Glycine max","IQ-domain 32","protein_coding"
"Glyma.06G073700","No alias","Glycine max","embryo defective 2410","protein_coding"
"Glyma.06G086000","No alias","Glycine max","Protein of unknown function (DUF810)","protein_coding"
"Glyma.06G088900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.06G101600","No alias","Glycine max","transferases, transferring glycosyl groups","protein_coding"
"Glyma.06G102300","No alias","Glycine max","UDP-glucosyl transferase 85A3","protein_coding"
"Glyma.06G129000","No alias","Glycine max","Protein with RING/U-box and TRAF-like domains","protein_coding"
"Glyma.06G143500","No alias","Glycine max","ribonuclease II family protein","protein_coding"
"Glyma.06G152600","No alias","Glycine max","O-fucosyltransferase family protein","protein_coding"
"Glyma.07G063300","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.07G068700","No alias","Glycine max","transmembrane protein-related","protein_coding"
"Glyma.07G077100","No alias","Glycine max","26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain","protein_coding"
"Glyma.07G083500","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.07G125300","No alias","Glycine max","nuclear RNA polymerase C2","protein_coding"
"Glyma.07G125800","No alias","Glycine max","Protein of unknown function (DUF1005)","protein_coding"
"Glyma.07G207300","No alias","Glycine max","IQ-domain 13","protein_coding"
"Glyma.07G227400","No alias","Glycine max","GC-rich sequence DNA-binding factor-like protein","protein_coding"
"Glyma.07G237200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G252300","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.07G258700","No alias","Glycine max","beta glucosidase 46","protein_coding"
"Glyma.07G268200","No alias","Glycine max","binding","protein_coding"
"Glyma.07G272500","No alias","Glycine max","nucleic acid binding;RNA binding","protein_coding"
"Glyma.08G008000","No alias","Glycine max","signal recognition particle-related / SRP-related","protein_coding"
"Glyma.08G020200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G048000","No alias","Glycine max","PLATZ transcription factor family protein","protein_coding"
"Glyma.08G116900","No alias","Glycine max","Granulin repeat cysteine protease family protein","protein_coding"
"Glyma.08G125700","No alias","Glycine max","LETM1-like protein","protein_coding"
"Glyma.08G127200","No alias","Glycine max","UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups","protein_coding"
"Glyma.08G163800","No alias","Glycine max","LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein","protein_coding"
"Glyma.08G181400","No alias","Glycine max","ENTH/ANTH/VHS superfamily protein","protein_coding"
"Glyma.08G193000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.08G223800","No alias","Glycine max","Rad23 UV excision repair protein family","protein_coding"
"Glyma.08G259600","No alias","Glycine max","Ycf1 protein","protein_coding"
"Glyma.08G292000","No alias","Glycine max","IAA-leucine resistant (ILR)-like 2","protein_coding"
"Glyma.09G019400","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.09G060066","No alias","Glycine max","DNA ligase IV","protein_coding"
"Glyma.09G067100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G105300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.09G123500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G177300","No alias","Glycine max","MAP kinase 9","protein_coding"
"Glyma.09G195700","No alias","Glycine max","ARID/BRIGHT DNA-binding domain-containing protein","protein_coding"
"Glyma.09G197200","No alias","Glycine max","glutamate receptor 3.3","protein_coding"
"Glyma.09G216400","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.09G228900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G247400","No alias","Glycine max","RNA-binding KH domain-containing protein","protein_coding"
"Glyma.10G009200","No alias","Glycine max","squamosa promoter-binding protein-like 12","protein_coding"
"Glyma.10G040000","No alias","Glycine max","Glutathione S-transferase family protein","protein_coding"
"Glyma.10G042600","No alias","Glycine max","CLIP-associated protein","protein_coding"
"Glyma.10G101800","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.10G153200","No alias","Glycine max","indeterminate(ID)-domain 2","protein_coding"
"Glyma.10G179500","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.10G230000","No alias","Glycine max","phosphatase-related","protein_coding"
"Glyma.10G253300","No alias","Glycine max","cysteine-rich RLK (RECEPTOR-like protein kinase) 29","protein_coding"
"Glyma.10G286400","No alias","Glycine max","Nucleotidylyl transferase superfamily protein","protein_coding"
"Glyma.10G292800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G004400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G005500","No alias","Glycine max","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein","protein_coding"
"Glyma.11G019800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G030200","No alias","Glycine max","myb domain protein 85","protein_coding"
"Glyma.11G086000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G089400","No alias","Glycine max","kinesin-like calmodulin-binding protein (ZWICHEL)","protein_coding"
"Glyma.11G089700","No alias","Glycine max","GDA1/CD39 nucleoside phosphatase family protein","protein_coding"
"Glyma.11G193100","No alias","Glycine max","DNA ligase 1","protein_coding"
"Glyma.11G193150","No alias","Glycine max","DNA ligase 1","protein_coding"
"Glyma.11G210335","No alias","Glycine max","global transcription factor C","protein_coding"
"Glyma.11G216200","No alias","Glycine max","ALWAYS EARLY 4","protein_coding"
"Glyma.11G219200","No alias","Glycine max","XH/XS domain-containing protein","protein_coding"
"Glyma.11G245500","No alias","Glycine max","COP1-interacting protein 4","protein_coding"
"Glyma.11G246000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G003300","No alias","Glycine max","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Glyma.12G028900","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.12G070600","No alias","Glycine max","Seven transmembrane MLO family protein","protein_coding"
"Glyma.12G080900","No alias","Glycine max","DNA ligase 1","protein_coding"
"Glyma.12G135600","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.12G135700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G165400","No alias","Glycine max","RAB GTPase 11C","protein_coding"
"Glyma.12G172100","No alias","Glycine max","dsRNA-binding protein 2","protein_coding"
"Glyma.12G175400","No alias","Glycine max","ATP-dependent helicase family protein","protein_coding"
"Glyma.12G178700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G187500","No alias","Glycine max","ovate family protein 6","protein_coding"
"Glyma.12G205500","No alias","Glycine max","RING 1A","protein_coding"
"Glyma.12G222600","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Glyma.12G223300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G236300","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.13G008500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G030600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.13G084000","No alias","Glycine max","nitrate reductase 1","protein_coding"
"Glyma.13G112200","No alias","Glycine max","Protein of unknown function (DUF581)","protein_coding"
"Glyma.13G131900","No alias","Glycine max","arginine biosynthesis protein ArgJ family","protein_coding"
"Glyma.13G142200","No alias","Glycine max","SUPPRESSOR OF AUXIN RESISTANCE1","protein_coding"
"Glyma.13G151000","No alias","Glycine max","demeter-like 1","protein_coding"
"Glyma.13G158700","No alias","Glycine max","zinc finger (ubiquitin-hydrolase) domain-containing protein","protein_coding"
"Glyma.13G180100","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.13G181100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G218600","No alias","Glycine max","cullin4","protein_coding"
"Glyma.13G232200","No alias","Glycine max","SGNH hydrolase-type esterase superfamily protein","protein_coding"
"Glyma.13G256300","No alias","Glycine max","RNA-binding KH domain-containing protein","protein_coding"
"Glyma.13G260600","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.13G277700","No alias","Glycine max","Nucleotidyltransferase family protein","protein_coding"
"Glyma.13G303800","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding"
"Glyma.13G308300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G367700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G044900","No alias","Glycine max","Structural maintenance of chromosomes (SMC) family protein","protein_coding"
"Glyma.14G130000","No alias","Glycine max","molybdate transporter 1","protein_coding"
"Glyma.14G186800","No alias","Glycine max","Protein of unknown function (DUF3133)","protein_coding"
"Glyma.14G204700","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.14G218400","No alias","Glycine max","Abscisic acid-responsive (TB2/DP1, HVA22) family protein","protein_coding"
"Glyma.14G222000","No alias","Glycine max","calcium-dependent protein kinase 29","protein_coding"
"Glyma.15G000900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.15G033800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G098000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.15G112300","No alias","Glycine max","Phosphofructokinase family protein","protein_coding"
"Glyma.15G121500","No alias","Glycine max","C2 calcium/lipid-binding and GRAM domain containing protein","protein_coding"
"Glyma.15G166700","No alias","Glycine max","DNA ligase IV","protein_coding"
"Glyma.15G202500","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.15G213200","No alias","Glycine max","cyclophilin 59","protein_coding"
"Glyma.15G220800","No alias","Glycine max","NADH:cytochrome B5 reductase 1","protein_coding"
"Glyma.15G236500","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.15G257100","No alias","Glycine max","Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding"
"Glyma.16G017800","No alias","Glycine max","metal tolerance protein A2","protein_coding"
"Glyma.16G031600","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.16G035400","No alias","Glycine max","Cyclin/Brf1-like TBP-binding protein","protein_coding"
"Glyma.16G131600","No alias","Glycine max","Forkhead-associated (FHA) domain-containing protein","protein_coding"
"Glyma.16G135500","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.16G174300","No alias","Glycine max","disease resistance family protein / LRR family protein","protein_coding"
"Glyma.17G083300","No alias","Glycine max","Phosphoribulokinase / Uridine kinase family","protein_coding"
"Glyma.17G150900","No alias","Glycine max","SBP (S-ribonuclease binding protein) family protein","protein_coding"
"Glyma.17G161800","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.17G178001","No alias","Glycine max","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding"
"Glyma.17G191900","No alias","Glycine max","Putative serine esterase  family protein","protein_coding"
"Glyma.17G247100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G248200","No alias","Glycine max","lysophosphatidyl acyltransferase 4","protein_coding"
"Glyma.17G260300","No alias","Glycine max","Peroxidase superfamily protein","protein_coding"
"Glyma.18G054700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.18G094500","No alias","Glycine max","zinc finger (C2H2 type) family protein","protein_coding"
"Glyma.18G147200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G208900","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.18G221900","No alias","Glycine max","SMAD/FHA domain-containing protein","protein_coding"
"Glyma.18G228000","No alias","Glycine max","5\'-3\' exonuclease family protein","protein_coding"
"Glyma.18G237000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G240100","No alias","Glycine max","Alpha-1,4-glucan-protein synthase family protein","protein_coding"
"Glyma.18G248000","No alias","Glycine max","Alcohol dehydrogenase transcription factor Myb/SANT-like family protein","protein_coding"
"Glyma.18G270150","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G292900","No alias","Glycine max","DNA LIGASE 6","protein_coding"
"Glyma.19G075700","No alias","Glycine max","Proteasome component (PCI) domain protein","protein_coding"
"Glyma.19G085600","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Glyma.19G239400","No alias","Glycine max","DHHC-type zinc finger family protein","protein_coding"
"Glyma.19G243400","No alias","Glycine max","Pseudouridine synthase family protein","protein_coding"
"Glyma.19G247200","No alias","Glycine max","Plant protein of unknown function (DUF946)","protein_coding"
"Glyma.19G248000","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"Glyma.20G003500","No alias","Glycine max","O-methyltransferase 1","protein_coding"
"Glyma.20G038500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G081800","No alias","Glycine max","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain","protein_coding"
"Glyma.20G144400","No alias","Glycine max","time for coffee","protein_coding"
"Glyma.20G155800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.20G159000","No alias","Glycine max","VASCULAR-RELATED NAC-DOMAIN 6","protein_coding"
"Glyma.20G190300","No alias","Glycine max","phosphate transporter traffic facilitator1","protein_coding"
"Glyma.20G198300","No alias","Glycine max","structural maintenance of chromosomes 5","protein_coding"
"Glyma.20G223500","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"GRMZM2G006450","No alias","Zea mays","Ribosomal L18p/L5e family protein","protein_coding"
"GRMZM2G014750","No alias","Zea mays","La protein 1","protein_coding"
"GRMZM2G019777","No alias","Zea mays","ARM repeat superfamily protein","protein_coding"
"GRMZM2G020187","No alias","Zea mays","XS domain-containing protein / XS zinc finger domain-containing protein-related","protein_coding"
"GRMZM2G024211","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G042118","No alias","Zea mays","glycine-rich RNA-binding protein 2","protein_coding"
"GRMZM2G071162","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G071304","No alias","Zea mays","DNA ligase 1","protein_coding"
"GRMZM2G094123","No alias","Zea mays","Class II aaRS and biotin synthetases superfamily protein","protein_coding"
"GRMZM2G113655","No alias","Zea mays","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"GRMZM2G133943","No alias","Zea mays","phospholipase D beta 1","protein_coding"
"GRMZM2G141642","No alias","Zea mays","cyclic nucleotide-binding transporter 1","protein_coding"
"GRMZM2G144028","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G147373","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G156158","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G168968","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G176225","No alias","Zea mays","wall-associated kinase 2","protein_coding"
"GRMZM2G178650","No alias","Zea mays","plectin-related","protein_coding"
"GRMZM2G329885","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G412986","No alias","Zea mays","Glycosyltransferase family 61 protein","protein_coding"
"GRMZM2G420380","No alias","Zea mays","squamosa promoter binding protein-like 1","protein_coding"
"GRMZM2G427067","No alias","Zea mays","DNA LIGASE 6","protein_coding"
"GRMZM2G451965","No alias","Zea mays","glycosyl hydrolase 9B8","protein_coding"
"GRMZM2G454018","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G466835","No alias","Zea mays","receptor like protein 46","protein_coding"
"GRMZM5G851753","No alias","Zea mays","DNA ligase IV","protein_coding"
"HORVU0Hr1G020260.4","No alias","Hordeum vulgare","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"HORVU0Hr1G022380.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G024120.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G038620.1","No alias","Hordeum vulgare","component *(KU80) of Ku70-Ku80 helicase complex","protein_coding"
"HORVU1Hr1G011630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G015270.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G018700.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G021530.1","No alias","Hordeum vulgare","regulatory protein *(DRB2) of miRNA biogenesis pathway","protein_coding"
"HORVU1Hr1G022050.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G024210.1","No alias","Hordeum vulgare","methylation reader Alfin of PRC1 complex","protein_coding"
"HORVU1Hr1G030710.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G038070.1","No alias","Hordeum vulgare","C-class RAB GTPase","protein_coding"
"HORVU1Hr1G040930.1","No alias","Hordeum vulgare","component *(VPS2/CHMP2) of ESCRT-III complex","protein_coding"
"HORVU1Hr1G042560.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G043320.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G044350.16","No alias","Hordeum vulgare","EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"HORVU1Hr1G049460.1","No alias","Hordeum vulgare","regulatory protein *(AN) of mRNA stress granule formation","protein_coding"
"HORVU1Hr1G055370.1","No alias","Hordeum vulgare","3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU1Hr1G058700.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G062650.1","No alias","Hordeum vulgare","subunit delta of cargo adaptor F-subcomplex","protein_coding"
"HORVU1Hr1G062690.3","No alias","Hordeum vulgare","component *(ISA2) of ISA1-ISA2 isoamylase heterodimer","protein_coding"
"HORVU1Hr1G064480.1","No alias","Hordeum vulgare","RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI)","protein_coding"
"HORVU1Hr1G073480.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G074370.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G075000.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G075270.8","No alias","Hordeum vulgare","RNA polymerase-V auxiliary factor *(KTF1/SPT5L)","protein_coding"
"HORVU1Hr1G080360.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G083730.8","No alias","Hordeum vulgare","atypical quiescin sulfhydryl oxidase *(QSOX)","protein_coding"
"HORVU1Hr1G094250.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G005650.6","No alias","Hordeum vulgare","adaptor protein exchange factor *(CAND1)","protein_coding"
"HORVU2Hr1G013210.4","No alias","Hordeum vulgare","EC_4.2 carbon-oxygen lyase","protein_coding"
"HORVU2Hr1G019920.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G022080.12","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU2Hr1G025180.1","No alias","Hordeum vulgare","component *(SYF1/MAC9)  of MAC spliceosome-associated complex","protein_coding"
"HORVU2Hr1G030640.1","No alias","Hordeum vulgare","centrin component *(CEN1/2) of TREX-2 mRNP trafficking complex & multifunctional centrin *(CEN1/2) & calcium sensor *(CML)","protein_coding"
"HORVU2Hr1G041090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G041780.2","No alias","Hordeum vulgare","regulatory protein *(PATROL1) involved in cellulose synthase trafficking","protein_coding"
"HORVU2Hr1G046660.6","No alias","Hordeum vulgare","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"HORVU2Hr1G058260.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G062330.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G069910.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G069950.6","No alias","Hordeum vulgare","CAMTA-type transcription factor","protein_coding"
"HORVU2Hr1G080440.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G083530.1","No alias","Hordeum vulgare","preprotein processing peptidase *(ATP23)","protein_coding"
"HORVU2Hr1G097570.20","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G100690.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G100740.27","No alias","Hordeum vulgare","DNA ligase component *(LIG4) of LIG4-XRCC4 ligase complex & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"HORVU2Hr1G101760.2","No alias","Hordeum vulgare","cold sensor *(COLD1) & plasma membrane-localized abscisic acid receptor *(GTG)","protein_coding"
"HORVU2Hr1G106380.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G106960.7","No alias","Hordeum vulgare","large subunit zeta of AP-5 cargo adaptor complex","protein_coding"
"HORVU2Hr1G107150.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G107250.1","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G110590.1","No alias","Hordeum vulgare","regulatory component *(RPN8) of 26S proteasome","protein_coding"
"HORVU2Hr1G114940.3","No alias","Hordeum vulgare","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"HORVU2Hr1G116320.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G120590.2","No alias","Hordeum vulgare","regulatory E3 ubiquitin ligase *(LUNAPARK)","protein_coding"
"HORVU2Hr1G123650.2","No alias","Hordeum vulgare","RLCK-XII receptor-like protein kinase & brassinosteroid signalling protein kinase *(BSK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU3Hr1G006330.1","No alias","Hordeum vulgare","component *(SPCs3) of SPC endoplasmic signal peptidase complex","protein_coding"
"HORVU3Hr1G013400.3","No alias","Hordeum vulgare","1,4-dihydroxy-2-naphthoyl-CoA thioesterase *(MenH/DHNAT)","protein_coding"
"HORVU3Hr1G013720.1","No alias","Hordeum vulgare","subunit beta of type-I protein prenyltransferase complex","protein_coding"
"HORVU3Hr1G020250.8","No alias","Hordeum vulgare","EC_6.1 ligase forming carbon-oxygen bond & glutamine-tRNA ligase","protein_coding"
"HORVU3Hr1G020810.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G047160.17","No alias","Hordeum vulgare","MLK-PP2C protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU3Hr1G048870.35","No alias","Hordeum vulgare","glutamate dehydrogenase & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding"
"HORVU3Hr1G049910.1","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU3Hr1G054330.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G055830.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G058380.1","No alias","Hordeum vulgare","component *(TAF7) of TFIId basal transcription regulation complex","protein_coding"
"HORVU3Hr1G058910.1","No alias","Hordeum vulgare","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding"
"HORVU3Hr1G063470.71","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G066410.2","No alias","Hordeum vulgare","transcriptional co-activator *(KIWI/KELP) involved in intine formation","protein_coding"
"HORVU3Hr1G066930.1","No alias","Hordeum vulgare","component *(CAF1c/MSI) of CAF1 histone chaperone complex & flowering time factor *(FVE)","protein_coding"
"HORVU3Hr1G070960.2","No alias","Hordeum vulgare","Golgin-type membrane tethering protein *(GC1)","protein_coding"
"HORVU3Hr1G073850.1","No alias","Hordeum vulgare","component *(EXO70) of Exocyst complex","protein_coding"
"HORVU3Hr1G076960.1","No alias","Hordeum vulgare","component *(eIF3l) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"HORVU3Hr1G078260.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G081540.8","No alias","Hordeum vulgare","component *(TAF9) of SAGA transcription co-activator complex","protein_coding"
"HORVU3Hr1G097580.2","No alias","Hordeum vulgare","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"HORVU3Hr1G110870.4","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)","protein_coding"
"HORVU4Hr1G014760.3","No alias","Hordeum vulgare","LRR-Xa protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G015060.4","No alias","Hordeum vulgare","methylation reader Alfin of PRC1 complex","protein_coding"
"HORVU4Hr1G015070.1","No alias","Hordeum vulgare","AP-endonuclease *(APE1) & EC_4.2 carbon-oxygen lyase","protein_coding"
"HORVU4Hr1G019530.3","No alias","Hordeum vulgare","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"HORVU4Hr1G020540.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G021220.1","No alias","Hordeum vulgare","regulatory protein *(CYCT) of cell cycle & regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex","protein_coding"
"HORVU4Hr1G026050.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G028610.1","No alias","Hordeum vulgare","nucleocytoplasmic transport karyopherin *(PLANTKAP)","protein_coding"
"HORVU4Hr1G033280.4","No alias","Hordeum vulgare","clathrin uncoating protein *(AUL)","protein_coding"
"HORVU4Hr1G033860.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G040630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G050280.1","No alias","Hordeum vulgare","lytic vacuole protein sorting receptor *(VSR)","protein_coding"
"HORVU4Hr1G051610.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G059150.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G066580.3","No alias","Hordeum vulgare","UDP-3-O-acyl N-acetylglucosamine deacetylase *(LpxC)","protein_coding"
"HORVU4Hr1G082690.4","No alias","Hordeum vulgare","exoribonuclease *(RRP44a)","protein_coding"
"HORVU4Hr1G085270.2","No alias","Hordeum vulgare","regulatory component *(ALIS) of ALA-ALIS flippase complex & regulatory component *(ALIS) of phospholipid flippase complex","protein_coding"
"HORVU4Hr1G088910.12","No alias","Hordeum vulgare","MAPKKK-kinase protein kinase & MAP4K accessory protein kinase *(TOI4/5) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G001400.5","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding"
"HORVU5Hr1G019030.9","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group & pyrophosphate-dependent phosphofructokinase","protein_coding"
"HORVU5Hr1G022470.1","No alias","Hordeum vulgare","component *(PFD3) of Prefoldin co-chaperone complex","protein_coding"
"HORVU5Hr1G024630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G037500.1","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G041240.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G043190.2","No alias","Hordeum vulgare","2-isopropylmalate synthase *(IPMS) & EC_2.3 acyltransferase","protein_coding"
"HORVU5Hr1G067090.1","No alias","Hordeum vulgare","component *(TWD40) of TPLATE AP-2 co-adaptor complex","protein_coding"
"HORVU5Hr1G068750.1","No alias","Hordeum vulgare","diphthamide biosynthesis co-chaperone *(DPH4)","protein_coding"
"HORVU5Hr1G069380.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G070620.1","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G072260.1","No alias","Hordeum vulgare","component *(VPS52/POK) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"HORVU5Hr1G073930.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G074800.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G078430.2","No alias","Hordeum vulgare","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"HORVU5Hr1G080730.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G082570.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G088680.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G093280.5","No alias","Hordeum vulgare","regulatory protein *(LSD/LOL) of programmed cell death","protein_coding"
"HORVU5Hr1G103240.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G103360.5","No alias","Hordeum vulgare","regulatory component *(ALIS) of ALA-ALIS flippase complex & regulatory component *(ALIS) of phospholipid flippase complex","protein_coding"
"HORVU5Hr1G113070.1","No alias","Hordeum vulgare","C2H2-type subclass ZAT transcription factor","protein_coding"
"HORVU5Hr1G113180.1","No alias","Hordeum vulgare","chaperone *(Hsp70)","protein_coding"
"HORVU5Hr1G115720.3","No alias","Hordeum vulgare","epoxide hydrolase *(EH)","protein_coding"
"HORVU5Hr1G117030.1","No alias","Hordeum vulgare","GSK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G117190.5","No alias","Hordeum vulgare","SBP-type transcription factor","protein_coding"
"HORVU5Hr1G125420.4","No alias","Hordeum vulgare","ubiquitin-conjugating component *(GID3) of GID ubiquitination complex & E2 ubiquitin-conjugating enzyme *(UBC4)","protein_coding"
"HORVU6Hr1G009040.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G009380.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G020420.1","No alias","Hordeum vulgare","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"HORVU6Hr1G022170.1","No alias","Hordeum vulgare","EC_4.1 carbon-carbon lyase & diaminopimelate decarboxylase","protein_coding"
"HORVU6Hr1G025410.1","No alias","Hordeum vulgare","O-fucosyltransferase *(PAGR)","protein_coding"
"HORVU6Hr1G029880.18","No alias","Hordeum vulgare","component *(NRPC2) of RNA polymerase III complex","protein_coding"
"HORVU6Hr1G032610.8","No alias","Hordeum vulgare","component *(ARP4) shared with NuA4/SWR1 complexes & component *(ARP4) of SWR1 chromatin remodeling complex","protein_coding"
"HORVU6Hr1G037500.21","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(CYP63/CYP95) & EC_5.2 cis-trans-isomerase","protein_coding"
"HORVU6Hr1G047180.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G052970.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G053650.1","No alias","Hordeum vulgare","regulatory component of isocitrate dehydrogenase heterodimer & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU6Hr1G059300.25","No alias","Hordeum vulgare","promotor-binding component *(TFC3) of TFIIIc transcription factor complex","protein_coding"
"HORVU6Hr1G067390.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G071790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G071910.3","No alias","Hordeum vulgare","scaffold component *(VCS) of mRNA decapping complex","protein_coding"
"HORVU6Hr1G071930.4","No alias","Hordeum vulgare","component *(NRPE4) of RNA polymerase V complex & component *(NRPD4) of RNA polymerase IV complex","protein_coding"
"HORVU6Hr1G072070.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G072650.3","No alias","Hordeum vulgare","core component *(NHP2) of H/ACA snoRNP RNA pseudouridylation complex","protein_coding"
"HORVU6Hr1G073170.1","No alias","Hordeum vulgare","BBX class-III transcription factor","protein_coding"
"HORVU6Hr1G075240.2","No alias","Hordeum vulgare","beta-L-arabinopyranosidase *(APSE)","protein_coding"
"HORVU6Hr1G086220.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G088300.1","No alias","Hordeum vulgare","hydrolase component *(DCP2) of mRNA decapping complex","protein_coding"
"HORVU6Hr1G091690.4","No alias","Hordeum vulgare","subunit zeta *(CCT6) of CCT chaperonin folding complex","protein_coding"
"HORVU7Hr1G018350.2","No alias","Hordeum vulgare","component *(MED17) of head module of MEDIATOR transcription co-activator complex","protein_coding"
"HORVU7Hr1G023250.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G027350.3","No alias","Hordeum vulgare","component *(Metaxin) of outer mitochondrion membrane SAM insertion system","protein_coding"
"HORVU7Hr1G030300.1","No alias","Hordeum vulgare","deubiquitinase *(UBP23)","protein_coding"
"HORVU7Hr1G035390.1","No alias","Hordeum vulgare","component *(p24-delta) of GPI-anchor protein cargo receptor complex","protein_coding"
"HORVU7Hr1G037270.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G037420.1","No alias","Hordeum vulgare","cellulose synthase CSC-interactive protein *(CSI)","protein_coding"
"HORVU7Hr1G040110.1","No alias","Hordeum vulgare","phytochelatin synthase *(PCS)","protein_coding"
"HORVU7Hr1G040550.1","No alias","Hordeum vulgare","pyrophosphate-dependent phosphofructokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G040670.7","No alias","Hordeum vulgare","clathrin coated vesicle dynamin *(DRP2)","protein_coding"
"HORVU7Hr1G041950.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G043210.1","No alias","Hordeum vulgare","EC_3.1 hydrolase acting on ester bond","protein_coding"
"HORVU7Hr1G045770.7","No alias","Hordeum vulgare","microtubule-associated protein *(MAP65-2)","protein_coding"
"HORVU7Hr1G046280.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G053780.8","No alias","Hordeum vulgare","MYB-RELATED transcription factor *(DRMY)","protein_coding"
"HORVU7Hr1G056880.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G063030.9","No alias","Hordeum vulgare","endoribonuclease *(RNase E)","protein_coding"
"HORVU7Hr1G077420.1","No alias","Hordeum vulgare","component *(Magoh) of RNA quality control Exon Junction complex","protein_coding"
"HORVU7Hr1G080210.41","No alias","Hordeum vulgare","substrate adaptor *(BchD/GFS12) of CUL4-based E3 ubiquitin ligase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G080710.12","No alias","Hordeum vulgare","small subunit *(NRPC15) of TFIIIf transcription factor module","protein_coding"
"HORVU7Hr1G088070.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G092360.24","No alias","Hordeum vulgare","nMAT3/4 type-II mitochondrial RNA splicing factor","protein_coding"
"HORVU7Hr1G095810.7","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group & MAP-kinase protein kinase","protein_coding"
"HORVU7Hr1G096840.1","No alias","Hordeum vulgare","PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone methylation complex","protein_coding"
"HORVU7Hr1G106380.1","No alias","Hordeum vulgare","subunit alpha of RAB-GTPase geranylgeranyltransferase (RGT) complex & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU7Hr1G109560.19","No alias","Hordeum vulgare","endoribonuclease *(EndoV)","protein_coding"
"HORVU7Hr1G110630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G115550.2","No alias","Hordeum vulgare","protein S-acyltransferase *(PAT23/24)","protein_coding"
"HORVU7Hr1G120540.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G121150.16","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00001_0160","kfl00001_0160_v1.1","Klebsormidium nitens","(at3g61600 : 178.0) POZ/BTB containing-protein AtPOB1; POZ/BTB containin G-protein 1 (POB1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ/Kelch-associated protein (TAIR:AT2G46260.1); Has 3475 Blast hits to 3460 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 3231; Fungi - 0; Plants - 131; Viruses - 11; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"Kfl00001_0270","kfl00001_0270_v1.1","Klebsormidium nitens","(at2g42700 : 255.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"Kfl00004_0450","kfl00004_0450_v1.1","Klebsormidium nitens","(at4g36090 : 252.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"Kfl00006_0120","kfl00006_0120_v1.1","Klebsormidium nitens","(at5g21930 : 455.0) P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport; P-type ATPase of Arabidopsis 2 (PAA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: P-type ATP-ase 1 (TAIR:AT4G33520.2). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"Kfl00006_0280","kfl00006_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00009_0110","kfl00009_0110_v1.1","Klebsormidium nitens","(at3g18630 : 321.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0200","kfl00010_0200_v1.1","Klebsormidium nitens","(at1g16290 : 189.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0380","kfl00010_0380_v1.1","Klebsormidium nitens","(at3g06080 : 143.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"Kfl00012_0200","kfl00012_0200_v1.1","Klebsormidium nitens","(at5g44000 : 342.0) Glutathione S-transferase family protein; FUNCTIONS IN: glutathione transferase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"Kfl00012_0510","kfl00012_0510_v1.1","Klebsormidium nitens","(at5g24630 : 135.0) This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells.; brassinosteroid-insensitive4 (BIN4); FUNCTIONS IN: double-stranded DNA binding; INVOLVED IN: in 7 processes; LOCATED IN: DNA topoisomerase complex (ATP-hydrolyzing), nucleus; EXPRESSED IN: cotyledon vascular system, cotyledon, root tip, leaf trichome, leaf; Has 3628 Blast hits to 2405 proteins in 320 species: Archae - 6; Bacteria - 1196; Metazoa - 1107; Fungi - 390; Plants - 165; Viruses - 17; Other Eukaryotes - 747 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"Kfl00012_g11","kfl00012_g11_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00013_0220","kfl00013_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00013_0480","kfl00013_0480_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00014_0290","kfl00014_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00015_0230","kfl00015_0230_v1.1","Klebsormidium nitens",""(at4g10100 : 90.1) molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; ""co-factor for nitrate, reductase and xanthine dehydrogenase 7"" (CNX7); CONTAINS InterPro DOMAIN/s: ThiamineS (InterPro:IPR003749), Molybdopterin converting factor, subunit 1 (InterPro:IPR010034), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); Has 1000 Blast hits to 1000 proteins in 381 species: Archae - 21; Bacteria - 814; Metazoa - 52; Fungi - 2; Plants - 54; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)"","protein_coding"
"Kfl00016_0100","kfl00016_0100_v1.1","Klebsormidium nitens","(at1g10570 : 134.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation.; OVERLY TOLERANT TO SALT 2 (OTS2); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00016_0120","kfl00016_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00016_0200","kfl00016_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00017_0310","kfl00017_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00018_0120","kfl00018_0120_v1.1","Klebsormidium nitens","(at4g22140 : 226.0) EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0660","kfl00020_0660_v1.1","Klebsormidium nitens","(at2g40700 : 447.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (p46942|db10_nicsy : 97.4) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"Kfl00023_0280","kfl00023_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00023_0450","kfl00023_0450_v1.1","Klebsormidium nitens","(at5g57160 : 499.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 397.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0420","kfl00024_0420_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00025_0250","kfl00025_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00026_0200","kfl00026_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00026_0260","kfl00026_0260_v1.1","Klebsormidium nitens","(q9xfh3|mad2_maize : 253.0) Mitotic spindle checkpoint protein MAD2 - Zea mays (Maize) & (at3g25980 : 249.0) Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans.; MITOTIC ARREST-DEFICIENT 2 (MAD2); CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0370","kfl00026_0370_v1.1","Klebsormidium nitens","(at5g51300 : 504.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 1008.0) &  (original description: no original description)","protein_coding"
"Kfl00027_0310","kfl00027_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00027_0440","kfl00027_0440_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00029_0390","kfl00029_0390_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00029_g28","kfl00029_g28_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00030_0070","kfl00030_0070_v1.1","Klebsormidium nitens","(p48786|prh_petcr : 150.0) Pathogenesis-related homeodomain protein (PRHP) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at3g19510 : 140.0) Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1  homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.; HAT3.1; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: pathogenesis related homeodomain protein  A (TAIR:AT4G29940.1); Has 21195 Blast hits to 13195 proteins in 937 species: Archae - 172; Bacteria - 5087; Metazoa - 6772; Fungi - 2621; Plants - 1255; Viruses - 207; Other Eukaryotes - 5081 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0280","kfl00030_0280_v1.1","Klebsormidium nitens","(o23732|gshb_braju : 532.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 524.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0100","kfl00031_0100_v1.1","Klebsormidium nitens","(at5g55060 : 195.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0230","kfl00032_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00037_0070","kfl00037_0070_v1.1","Klebsormidium nitens","(at1g07540 : 131.0) Arabidopsis thaliana telomere-binding protein, putative (At1g07540); TRF-like 2 (TRFL2); FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: TRF-like 1 (TAIR:AT3G46590.2); Has 350 Blast hits to 338 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 309; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00038_0210","kfl00038_0210_v1.1","Klebsormidium nitens","(at3g27120 : 445.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27130.1); Has 33109 Blast hits to 30842 proteins in 3139 species: Archae - 1459; Bacteria - 13342; Metazoa - 4781; Fungi - 3652; Plants - 2738; Viruses - 26; Other Eukaryotes - 7111 (source: NCBI BLink). & (q96372|cdc48_capan : 131.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 890.0) &  (original description: no original description)","protein_coding"
"Kfl00038_0260","kfl00038_0260_v1.1","Klebsormidium nitens","(q9lre6|dpod1_orysa : 1360.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1356.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 2712.0) &  (original description: no original description)","protein_coding"
"Kfl00041_0270","kfl00041_0270_v1.1","Klebsormidium nitens","(at1g11950 : 252.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"Kfl00044_0290","kfl00044_0290_v1.1","Klebsormidium nitens","(at1g17690 : 525.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0110","kfl00046_0110_v1.1","Klebsormidium nitens","(at1g48310 : 451.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 120.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0270","kfl00046_0270_v1.1","Klebsormidium nitens","(at5g57160 : 786.0) Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV.  Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration.  Interacts with the Arabidopsis homologue of XRCC4.; ATLIG4; FUNCTIONS IN: protein binding, DNA ligase (ATP) activity; INVOLVED IN: double-strand break repair, response to X-ray, response to DNA damage stimulus; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059), ATP-dependent DNA ligase (InterPro:IPR000977), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 7656 Blast hits to 6618 proteins in 1076 species: Archae - 317; Bacteria - 1869; Metazoa - 2250; Fungi - 907; Plants - 304; Viruses - 214; Other Eukaryotes - 1795 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 592.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1572.0) &  (original description: no original description)","protein_coding"
"Kfl00049_0160","kfl00049_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00049_0350","kfl00049_0350_v1.1","Klebsormidium nitens","(at4g22670 : 188.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"Kfl00050_0410","kfl00050_0410_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00050_g18","kfl00050_g18_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00051_0300","kfl00051_0300_v1.1","Klebsormidium nitens","(at4g32820 : 190.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); Has 168 Blast hits to 155 proteins in 63 species: Archae - 8; Bacteria - 15; Metazoa - 66; Fungi - 5; Plants - 51; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"Kfl00053_0220","kfl00053_0220_v1.1","Klebsormidium nitens","(at3g59630 : 234.0) diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0090","kfl00057_0090_v1.1","Klebsormidium nitens","(at2g22140 : 132.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"Kfl00058_0320","kfl00058_0320_v1.1","Klebsormidium nitens","(at5g07810 : 429.0) SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), HNH endonuclease (InterPro:IPR002711), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor18 (TAIR:AT1G48310.1); Has 16904 Blast hits to 14939 proteins in 1977 species: Archae - 110; Bacteria - 5677; Metazoa - 3556; Fungi - 3371; Plants - 1315; Viruses - 123; Other Eukaryotes - 2752 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"Kfl00059_0240","kfl00059_0240_v1.1","Klebsormidium nitens","(at5g20930 : 579.0) Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.; TOUSLED (TSL); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora3 (TAIR:AT2G45490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 93.6) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0310","kfl00060_0310_v1.1","Klebsormidium nitens","(p37707|b2_dauca : 119.0) B2 protein - Daucus carota (Carrot) & (at5g42050 : 109.0) DCD (Development and Cell Death) domain protein; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G27090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0360","kfl00060_0360_v1.1","Klebsormidium nitens","(at4g02460 : 365.0) Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.; POSTMEIOTIC SEGREGATION 1 (PMS1); FUNCTIONS IN: mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site (InterPro:IPR014762), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA mismatch repair protein, C-terminal (InterPro:IPR013507), MutL, C-terminal, dimerisation (InterPro:IPR014790), DNA mismatch repair protein, N-terminal (InterPro:IPR014763), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA mismatch repair protein (InterPro:IPR002099), Post Meiotic Segregation 2 (InterPro:IPR015434), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1); Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138; Bacteria - 7516; Metazoa - 568; Fungi - 666; Plants - 148; Viruses - 0; Other Eukaryotes - 1435 (source: NCBI BLink). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0200","kfl00061_0200_v1.1","Klebsormidium nitens","(at4g15850 : 455.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (q41382|rh7_spiol : 100.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0240","kfl00061_0240_v1.1","Klebsormidium nitens","(at4g25120 : 114.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase.  The Arabidopsis SRS2 is a functional 3í- to 5í-helicase.  Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00066_0080","kfl00066_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00066_0260","kfl00066_0260_v1.1","Klebsormidium nitens","(at5g15920 : 686.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex.  SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"Kfl00066_0330","kfl00066_0330_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00067_0150","kfl00067_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00069_0240","kfl00069_0240_v1.1","Klebsormidium nitens","(at3g02680 : 157.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and MRE11; nijmegen breakage syndrome 1 (NBS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); Has 164 Blast hits to 161 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 112; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0300","kfl00069_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00070_0070","kfl00070_0070_v1.1","Klebsormidium nitens","(at1g79350 : 143.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"Kfl00073_0240","kfl00073_0240_v1.1","Klebsormidium nitens","(at2g45540 : 307.0) WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"Kfl00083_0130","kfl00083_0130_v1.1","Klebsormidium nitens","(at5g60760 : 414.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45090.1); Has 1216 Blast hits to 969 proteins in 195 species: Archae - 93; Bacteria - 85; Metazoa - 220; Fungi - 67; Plants - 127; Viruses - 43; Other Eukaryotes - 581 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"Kfl00084_0070","kfl00084_0070_v1.1","Klebsormidium nitens","(at2g35800 : 570.0) mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G26360.1); Has 17569 Blast hits to 12630 proteins in 423 species: Archae - 0; Bacteria - 12; Metazoa - 7266; Fungi - 5152; Plants - 3396; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink). & (p29518|bt1_maize : 90.5) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 1140.0) &  (original description: no original description)","protein_coding"
"Kfl00085_0310","kfl00085_0310_v1.1","Klebsormidium nitens","(at5g51230 : 92.4) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"Kfl00090_0010","kfl00090_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00095_0160","kfl00095_0160_v1.1","Klebsormidium nitens","(at3g18390 : 154.0) embryo defective 1865 (EMB1865); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11; Bacteria - 10; Metazoa - 285; Fungi - 118; Plants - 447; Viruses - 43; Other Eukaryotes - 367 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"Kfl00096_0110","kfl00096_0110_v1.1","Klebsormidium nitens","(q7eyv7|parp1_orysa : 838.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) & (at2g31320 : 836.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 1672.0) &  (original description: no original description)","protein_coding"
"Kfl00100_0120","kfl00100_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00101_0260","kfl00101_0260_v1.1","Klebsormidium nitens","(at4g34270 : 136.0) TIP41-like family protein; CONTAINS InterPro DOMAIN/s: TIP41-like protein (InterPro:IPR007303); Has 348 Blast hits to 346 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 127; Plants - 55; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0230","kfl00102_0230_v1.1","Klebsormidium nitens","(at1g35530 : 555.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"Kfl00104_0210","kfl00104_0210_v1.1","Klebsormidium nitens","(at4g08320 : 137.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: protein phosphatase 5.2 (TAIR:AT2G42810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"Kfl00106_g25","kfl00106_g25_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00110_0090","kfl00110_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00110_0110","kfl00110_0110_v1.1","Klebsormidium nitens","(at3g15140 : 92.4) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: exonuclease activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease, RNase T/DNA polymerase III (InterPro:IPR013520); Has 576 Blast hits to 576 proteins in 123 species: Archae - 0; Bacteria - 44; Metazoa - 336; Fungi - 16; Plants - 80; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"Kfl00110_0200","kfl00110_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00113_0070","kfl00113_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00115_0260","kfl00115_0260_v1.1","Klebsormidium nitens","(at5g50310 : 482.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 964.0) &  (original description: no original description)","protein_coding"
"Kfl00118_0320","kfl00118_0320_v1.1","Klebsormidium nitens","(at5g13630 : 635.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"Kfl00125_g16","kfl00125_g16_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00131_0170","kfl00131_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00132_0250","kfl00132_0250_v1.1","Klebsormidium nitens","(at5g64580 : 406.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (o82150|ftsh_tobac : 228.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 812.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0140","kfl00137_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00139_0170","kfl00139_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00140_0100","kfl00140_0100_v1.1","Klebsormidium nitens","(at3g04380 : 281.0) Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9.  One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins.  Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity.  SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.; SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0030","kfl00144_0030_v1.1","Klebsormidium nitens","(at1g18335 : 168.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"Kfl00145_0080","kfl00145_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00147_0040","kfl00147_0040_v1.1","Klebsormidium nitens","(at3g02820 : 124.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0050","kfl00147_0050_v1.1","Klebsormidium nitens","(at1g08600 : 369.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|68872 : 195.0) no description available & (q7g8y3|isw2_orysa : 102.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|39774 : 94.4) no description available & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0170","kfl00147_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00148_0140","kfl00148_0140_v1.1","Klebsormidium nitens","(at2g35140 : 98.6) DCD (Development and Cell Death) domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.2); Has 307 Blast hits to 293 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"Kfl00151_0290","kfl00151_0290_v1.1","Klebsormidium nitens","(at3g56720 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"Kfl00152_0040","kfl00152_0040_v1.1","Klebsormidium nitens","(at2g03270 : 205.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"Kfl00153_0200","kfl00153_0200_v1.1","Klebsormidium nitens","(at4g27340 : 128.0) Met-10+ like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56120.1); Has 1666 Blast hits to 1640 proteins in 617 species: Archae - 405; Bacteria - 591; Metazoa - 172; Fungi - 146; Plants - 123; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00157_0140","kfl00157_0140_v1.1","Klebsormidium nitens","(at1g24706 : 704.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors.  Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THO complex, subunitTHOC2, C-region (InterPro:IPR021418), THO complex, subunitTHOC2, N-region (InterPro:IPR021726). & (reliability: 1408.0) &  (original description: no original description)","protein_coding"
"Kfl00161_0190","kfl00161_0190_v1.1","Klebsormidium nitens","(at4g18590 : 93.6) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"Kfl00165_0130","kfl00165_0130_v1.1","Klebsormidium nitens","(at5g35750 : 142.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 125.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"Kfl00170_0260","kfl00170_0260_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00174_0070","kfl00174_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00175_0210","kfl00175_0210_v1.1","Klebsormidium nitens","(at5g63080 : 239.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT1G78280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl00178_0060","kfl00178_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00182_0140","kfl00182_0140_v1.1","Klebsormidium nitens","(at2g41720 : 351.0) EMBRYO DEFECTIVE 2654 (EMB2654); INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 227.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 702.0) &  (original description: no original description)","protein_coding"
"Kfl00190_0160","kfl00190_0160_v1.1","Klebsormidium nitens","(at1g11780 : 151.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT5G01780.2); Has 1304 Blast hits to 1304 proteins in 617 species: Archae - 0; Bacteria - 928; Metazoa - 100; Fungi - 94; Plants - 80; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"Kfl00197_0080","kfl00197_0080_v1.1","Klebsormidium nitens","(at2g36310 : 119.0) uridine-ribohydrolase 1 (URH1); CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: uridine-ribohydrolase  2 (TAIR:AT1G05620.1); Has 6361 Blast hits to 6297 proteins in 1364 species: Archae - 75; Bacteria - 4675; Metazoa - 179; Fungi - 233; Plants - 187; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"Kfl00202_0050","kfl00202_0050_v1.1","Klebsormidium nitens","(at4g16570 : 226.0) protein arginine methyltransferase 7 (PRMT7); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein arginine N-methyltransferase (InterPro:IPR014644); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00211_0040","kfl00211_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00211_0120","kfl00211_0120_v1.1","Klebsormidium nitens","(at2g35820 : 153.0) ureidoglycolate hydrolases; FUNCTIONS IN: ureidoglycolate hydrolase activity; INVOLVED IN: allantoin catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ureidoglycolate hydrolase (InterPro:IPR007247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35810.1); Has 155 Blast hits to 155 proteins in 53 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"Kfl00217_0010","kfl00217_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00217_0140","kfl00217_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00221_0210","kfl00221_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00231_0100","kfl00231_0100_v1.1","Klebsormidium nitens","(at5g55390 : 398.0) Encodes EDM2 (enhanced downy mildew 2).  The predicted protein bears typical features of transcriptional regulators.  EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region.  Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif.  Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1).  EDM2 may function as a direct or indirect regulator of RPP7 expression.; ENHANCED DOWNY MILDEW 2 (EDM2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: EDM2-like protein1 (TAIR:AT5G48090.1). & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"Kfl00231_0150","kfl00231_0150_v1.1","Klebsormidium nitens","(at4g10020 : 197.0) Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include:   At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463).  Two copies of HSD1 and HSD4 exist due to a gene duplication event.  In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.; hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins in 3270 species: Archae - 807; Bacteria - 52029; Metazoa - 4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other Eukaryotes - 12490 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00234_0120","kfl00234_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00237_0010","kfl00237_0010_v1.1","Klebsormidium nitens","(at3g15460 : 339.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"Kfl00239_0050","kfl00239_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00242_0010","kfl00242_0010_v1.1","Klebsormidium nitens","(at1g08130 : 782.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 110.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1564.0) &  (original description: no original description)","protein_coding"
"Kfl00242_0030","kfl00242_0030_v1.1","Klebsormidium nitens","(at1g12800 : 166.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT3G23700.1); Has 17110 Blast hits to 8844 proteins in 2496 species: Archae - 8; Bacteria - 12066; Metazoa - 261; Fungi - 174; Plants - 188; Viruses - 3; Other Eukaryotes - 4410 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"Kfl00244_0090","kfl00244_0090_v1.1","Klebsormidium nitens","(p55857|smt3_orysa : 150.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at4g26840 : 149.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.; small ubiquitin-like modifier 1 (SUMO1); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 2 (TAIR:AT5G55160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00247_0035","kfl00247_0035_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00247_0040","kfl00247_0040_v1.1","Klebsormidium nitens","(at5g01660 : 207.0) CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"Kfl00249_0070","kfl00249_0070_v1.1","Klebsormidium nitens","(at3g26500 : 84.0) Encodes PIRL2, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 2 (PIRL2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 3 (TAIR:AT1G12970.1); Has 88229 Blast hits to 35961 proteins in 1363 species: Archae - 28; Bacteria - 8944; Metazoa - 35427; Fungi - 2710; Plants - 36018; Viruses - 25; Other Eukaryotes - 5077 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"Kfl00249_0150","kfl00249_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00250_0100","kfl00250_0100_v1.1","Klebsormidium nitens","(at3g06910 : 114.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity.; UB-like protease 1A (ULP1A); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1394 Blast hits to 1393 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 593; Fungi - 272; Plants - 373; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00255_0060","kfl00255_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00263_0100","kfl00263_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00264_0160","kfl00264_0160_v1.1","Klebsormidium nitens","(at4g19830 : 215.0) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT4G26555.1); Has 5413 Blast hits to 5325 proteins in 1280 species: Archae - 56; Bacteria - 2447; Metazoa - 955; Fungi - 366; Plants - 719; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"Kfl00271_0170","kfl00271_0170_v1.1","Klebsormidium nitens","(at5g46910 : 365.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"Kfl00272_0110","kfl00272_0110_v1.1","Klebsormidium nitens","(at3g11920 : 334.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"Kfl00273_0160","kfl00273_0160_v1.1","Klebsormidium nitens","(at2g31170 : 581.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (reliability: 1162.0) &  (original description: no original description)","protein_coding"
"Kfl00274_0130","kfl00274_0130_v1.1","Klebsormidium nitens","(at2g30630 : 199.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"Kfl00278_0120","kfl00278_0120_v1.1","Klebsormidium nitens","(at1g42440 : 386.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"Kfl00281_0060","kfl00281_0060_v1.1","Klebsormidium nitens","(at2g23530 : 224.0) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"Kfl00283_0030","kfl00283_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00285_0010","kfl00285_0010_v1.1","Klebsormidium nitens","(at5g23150 : 115.0) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have  reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances  AG function.; ENHANCER OF AG-4 2 (HUA2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G08230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"Kfl00290_0090","kfl00290_0090_v1.1","Klebsormidium nitens","(at5g28680 : 231.0) Receptor-like kinase required  for maintenance of pollen tube growth. Display polar localization at  the plasma membrane of the pollen tube tip.; ANXUR2 (ANX2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; LOCATED IN: apical plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT3G04690.1); Has 115671 Blast hits to 114295 proteins in 4417 species: Archae - 97; Bacteria - 12752; Metazoa - 43268; Fungi - 9644; Plants - 32773; Viruses - 427; Other Eukaryotes - 16710 (source: NCBI BLink). & (q8lkz1|nork_pea : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"Kfl00297_0120","kfl00297_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00307_0030","kfl00307_0030_v1.1","Klebsormidium nitens","(at4g15770 : 268.0) RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome assembly, ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosome biogenesis factor NIP7-like (InterPro:IPR005155), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Ribosome biogenesis factor, NIP7 (InterPro:IPR016686); Has 438 Blast hits to 438 proteins in 213 species: Archae - 5; Bacteria - 0; Metazoa - 151; Fungi - 132; Plants - 49; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"Kfl00307_0080","kfl00307_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00310_0020","kfl00310_0020_v1.1","Klebsormidium nitens","(at1g48650 : 321.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00310_0060","kfl00310_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00323_0070","kfl00323_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00326_0020","kfl00326_0020_v1.1","Klebsormidium nitens","(at2g22500 : 192.0) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; uncoupling protein 5 (UCP5); FUNCTIONS IN: binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 25222 Blast hits to 13203 proteins in 454 species: Archae - 0; Bacteria - 2; Metazoa - 10525; Fungi - 7328; Plants - 4898; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"Kfl00329_0020","kfl00329_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00332_0060","kfl00332_0060_v1.1","Klebsormidium nitens","(at3g49400 : 130.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00334_0010","kfl00334_0010_v1.1","Klebsormidium nitens","(at2g25100 : 313.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00334_0020","kfl00334_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00335_0130","kfl00335_0130_v1.1","Klebsormidium nitens","(at5g41760 : 326.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity; INVOLVED IN: carbohydrate transport, nucleotide-sugar transport; LOCATED IN: endomembrane system, integral to membrane, Golgi membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide-sugar transporter (InterPro:IPR007271), UDP/CMP-sugar transporter (InterPro:IPR021189), UDP-galactose transporter (InterPro:IPR004689); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G35335.1); Has 1068 Blast hits to 1053 proteins in 185 species: Archae - 0; Bacteria - 3; Metazoa - 567; Fungi - 123; Plants - 182; Viruses - 0; Other Eukaryotes - 193 (source: NCBI BLink). & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"Kfl00343_0170","kfl00343_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00349_0100","kfl00349_0100_v1.1","Klebsormidium nitens","(at3g60830 : 373.0) Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission.; actin-related protein 7 (ARP7); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 12219 Blast hits to 11995 proteins in 2504 species: Archae - 0; Bacteria - 50; Metazoa - 5224; Fungi - 3189; Plants - 1407; Viruses - 2; Other Eukaryotes - 2347 (source: NCBI BLink). & (p30173|act13_soltu : 236.0) Actin-101 - Solanum tuberosum (Potato) & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"Kfl00360_0070","kfl00360_0070_v1.1","Klebsormidium nitens","(at4g02110 : 142.0) transcription coactivators; FUNCTIONS IN: transcription coactivator activity; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 6090 Blast hits to 4661 proteins in 497 species: Archae - 12; Bacteria - 945; Metazoa - 2581; Fungi - 684; Plants - 424; Viruses - 13; Other Eukaryotes - 1431 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"Kfl00365_0030","kfl00365_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00387_0100","kfl00387_0100_v1.1","Klebsormidium nitens","(at2g22400 : 427.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"Kfl00393_0060","kfl00393_0060_v1.1","Klebsormidium nitens","(at4g29800 : 220.0) PATATIN-like protein 8 (PLP8); INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1). & (p11768|pat3_soltu : 174.0) Patatin class 1 precursor (Patatin class I) (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"Kfl00393_0120","kfl00393_0120_v1.1","Klebsormidium nitens","(at5g42700 : 82.4) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G19184.1); Has 276 Blast hits to 264 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 271; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00394_0120","kfl00394_0120_v1.1","Klebsormidium nitens","(at5g19330 : 798.0) Encodes an armadillo repeat protein involved in the abscisic acid response.  The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.; ARM repeat protein interacting with  ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1596.0) &  (original description: no original description)","protein_coding"
"Kfl00407_0020","kfl00407_0020_v1.1","Klebsormidium nitens","(at1g17680 : 90.1) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 5584 Blast hits to 3296 proteins in 567 species: Archae - 79; Bacteria - 1266; Metazoa - 1500; Fungi - 759; Plants - 424; Viruses - 52; Other Eukaryotes - 1504 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"Kfl00415_0100","kfl00415_0100_v1.1","Klebsormidium nitens","(at5g13960 : 389.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl00416_0140","kfl00416_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00417_0040","kfl00417_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00418_0120","kfl00418_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00424_0070","kfl00424_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00429_0040","kfl00429_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00448_0040","kfl00448_0040_v1.1","Klebsormidium nitens","(at2g20990 : 325.0) Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues.  Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome  recycling at the plasma membrane, but not membrane traffic along the secretory pathway.; synaptotagmin A (SYTA); CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"Kfl00457_0110","kfl00457_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00465_0080","kfl00465_0080_v1.1","Klebsormidium nitens","(at4g13870 : 167.0) Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.; Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00465_0110","kfl00465_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00476_0050","kfl00476_0050_v1.1","Klebsormidium nitens","(at1g54960 : 407.0) member of MEKK subfamily; NPK1-related protein kinase 2 (NP2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: NPK1-related protein kinase 1 (TAIR:AT1G09000.1); Has 135537 Blast hits to 133200 proteins in 4901 species: Archae - 150; Bacteria - 15240; Metazoa - 51035; Fungi - 12941; Plants - 33422; Viruses - 585; Other Eukaryotes - 22164 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 125.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"Kfl00478_0020","kfl00478_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00487_0050","kfl00487_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00490_0080","kfl00490_0080_v1.1","Klebsormidium nitens","(at3g54460 : 639.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 1278.0) &  (original description: no original description)","protein_coding"
"Kfl00497_0030","kfl00497_0030_v1.1","Klebsormidium nitens","(at1g29200 : 215.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G62330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0080","kfl00502_0080_v1.1","Klebsormidium nitens","(at4g18465 : 521.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"Kfl00506_0050","kfl00506_0050_v1.1","Klebsormidium nitens",""(at1g07110 : 588.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; ""fructose-2,6-bisphosphatase"" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (reliability: 1176.0) &  (original description: no original description)"","protein_coding"
"Kfl00510_0060","kfl00510_0060_v1.1","Klebsormidium nitens","(at5g26180 : 364.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 8801 Blast hits to 8742 proteins in 2315 species: Archae - 360; Bacteria - 6022; Metazoa - 655; Fungi - 388; Plants - 256; Viruses - 1; Other Eukaryotes - 1119 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00515_0060","kfl00515_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00521_0010","kfl00521_0010_v1.1","Klebsormidium nitens","(at5g24280 : 235.0) GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 (GMI1); BEST Arabidopsis thaliana protein match is: defective in meristem silencing 3 (TAIR:AT3G49250.1); Has 114 Blast hits to 102 proteins in 24 species: Archae - 0; Bacteria - 7; Metazoa - 8; Fungi - 4; Plants - 91; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"Kfl00542_0010","kfl00542_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00548_0020","kfl00548_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00551_0050","kfl00551_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00559_0010","kfl00559_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00560_0030","kfl00560_0030_v1.1","Klebsormidium nitens","(q40872|ag_pangi : 148.0) Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng) & (at3g58780 : 145.0) One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.; SHATTERPROOF 1 (SHP1); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: fruit dehiscence, ovule development, carpel development; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein  (TAIR:AT2G42830.1). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"Kfl00597_0010","kfl00597_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00602_0050","kfl00602_0050_v1.1","Klebsormidium nitens","(at5g47690 : 585.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1170.0) &  (original description: no original description)","protein_coding"
"Kfl00612_0020","kfl00612_0020_v1.1","Klebsormidium nitens","(at2g35920 : 974.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1948.0) &  (original description: no original description)","protein_coding"
"Kfl00614_0010","kfl00614_0010_v1.1","Klebsormidium nitens","(at1g30680 : 668.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 1336.0) &  (original description: no original description)","protein_coding"
"Kfl00656_0030","kfl00656_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00656_0040","kfl00656_0040_v1.1","Klebsormidium nitens","(at1g74850 : 221.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 163.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"Kfl00671_0020","kfl00671_0020_v1.1","Klebsormidium nitens","(at2g25660 : 1067.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2134.0) &  (original description: no original description)","protein_coding"
"Kfl00689_0080","kfl00689_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00690_0080","kfl00690_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00698_0030","kfl00698_0030_v1.1","Klebsormidium nitens","(at1g66730 : 736.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 85.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1472.0) &  (original description: no original description)","protein_coding"
"Kfl00703_0050","kfl00703_0050_v1.1","Klebsormidium nitens","(at5g63830 : 103.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"Kfl00707_0010","kfl00707_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00717_0030","kfl00717_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00733_0025","kfl00733_0025_v1.1","Klebsormidium nitens","(at1g05830 : 93.2) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.; trithorax-like protein 2 (ATX2); FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific), DNA binding; INVOLVED IN: histone H3-K4 methylation, regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: stigma, rosette leaf, male gametophyte, root; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), FY-rich, C-terminal (InterPro:IPR003889), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, N-terminal (InterPro:IPR003888), Post-SET domain (InterPro:IPR003616), FY-rich, C-terminal subgroup (InterPro:IPR018516), PWWP (InterPro:IPR000313), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2; Bacteria - 419; Metazoa - 3302; Fungi - 848; Plants - 1335; Viruses - 0; Other Eukaryotes - 1357 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"Kfl00737_0030","kfl00737_0030_v1.1","Klebsormidium nitens","(at1g68890 : 321.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (q9zpc0|ics_catro : 253.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00759_0010","kfl00759_0010_v1.1","Klebsormidium nitens","(at2g18990 : 239.0) thioredoxin domain-containing protein 9 homolog (TXND9); INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G25580.1); Has 1035 Blast hits to 1035 proteins in 264 species: Archae - 10; Bacteria - 75; Metazoa - 396; Fungi - 154; Plants - 221; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"Kfl00759_0040","kfl00759_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00765_0030","kfl00765_0030_v1.1","Klebsormidium nitens","(at1g34770 : 128.0) CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00773_0020","kfl00773_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00789_0110","kfl00789_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00794_0040","kfl00794_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00823_0040","kfl00823_0040_v1.1","Klebsormidium nitens","(at3g21820 : 348.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"Kfl00844_0020","kfl00844_0020_v1.1","Klebsormidium nitens","(at5g06220 : 220.0) LETM1-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G11560.4). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"Kfl00880_0030","kfl00880_0030_v1.1","Klebsormidium nitens","(at1g73930 : 486.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1630 (InterPro:IPR012860); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00903_0020","kfl00903_0020_v1.1","Klebsormidium nitens","(p55876|if5_maize : 298.0) Eukaryotic translation initiation factor 5 (eIF-5) - Zea mays (Maize) & (at1g36730 : 281.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G77840.1); Has 6371 Blast hits to 4946 proteins in 714 species: Archae - 245; Bacteria - 804; Metazoa - 2020; Fungi - 758; Plants - 416; Viruses - 40; Other Eukaryotes - 2088 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"Kfl00909_0020","kfl00909_0020_v1.1","Klebsormidium nitens","(at3g21640 : 350.0) encodes a 42 kDa FK506-binding protein (AtFKBP42) that possesses similarity to multidomain peptidyl-prolyl cis/trans isomerases (PPIases, EC 5.2.1.8), which are known to be components of mammalian steroid hormone receptor complexes. The protein appears to be localized to the plasma membrane by electron microscopy and binds to HSP90.1 and calmodulin in vitro. It also aggregates citrate synthase in vitro but does NOT show PPIase activity in vivo. Mutants are reduced in size and exhibit disoriented growth in all organs.; TWISTED DWARF 1 (TWD1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.2); Has 6043 Blast hits to 5631 proteins in 871 species: Archae - 12; Bacteria - 1331; Metazoa - 2461; Fungi - 414; Plants - 774; Viruses - 0; Other Eukaryotes - 1051 (source: NCBI BLink). & (q43207|fkb70_wheat : 132.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"Kfl00941_0010","kfl00941_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00962_0020","kfl00962_0020_v1.1","Klebsormidium nitens","(at1g01880 : 245.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: single-stranded DNA endonuclease family protein (TAIR:AT3G48900.2). & (q75li2|fen1b_orysa : 89.7) Flap endonuclease 1b (EC 3.1.-.-) (OsFEN-1b) - Oryza sativa (Rice) & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"Kfl00968_0020","kfl00968_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00977_0020","kfl00977_0020_v1.1","Klebsormidium nitens","(at5g15540 : 553.0) Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of  sister-chromatid cohesion and chromosome organization  during meiosis.; EMBRYO DEFECTIVE 2773 (EMB2773); FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: centromere complex assembly, sister chromatid cohesion, embryo development ending in seed dormancy, meiotic sister chromatid cohesion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Armadillo-type fold (InterPro:IPR016024), Zinc finger, PHD-finger (InterPro:IPR019787). & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"Kfl00989_0040","kfl00989_0040_v1.1","Klebsormidium nitens","(at2g21440 : 239.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl01061_0030","kfl01061_0030_v1.1","Klebsormidium nitens","(at5g65490 : 400.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"Kfl01073_0010","kfl01073_0010_v1.1","Klebsormidium nitens","(at2g17820 : 288.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (o49230|etr1_braol : 126.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"Kfl01154_0010","kfl01154_0010_v1.1","Klebsormidium nitens","(at4g32551 : 410.0) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.; LEUNIG (LUG); FUNCTIONS IN: transcription repressor activity, protein heterodimerization activity; INVOLVED IN: flower development, negative regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6). & (p93107|pf20_chlre : 81.3) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"Kfl01512_0020","kfl01512_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g01570","No alias","Oryza sativa","kinesin heavy chain, putative, expressed","protein_coding"
"LOC_Os01g06910","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g09030","No alias","Oryza sativa","2-aminoethanethiol dioxygenase, putative, expressed","protein_coding"
"LOC_Os01g13530","No alias","Oryza sativa","ABIL2, putative, expressed","protein_coding"
"LOC_Os01g16040","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os01g22370","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding"
"LOC_Os01g25320","No alias","Oryza sativa","auxilin, putative, expressed","protein_coding"
"LOC_Os01g37120","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os01g37650","No alias","Oryza sativa","esterase, putative, expressed","protein_coding"
"LOC_Os01g43330","No alias","Oryza sativa","extra-large G-protein-related, putative, expressed","protein_coding"
"LOC_Os01g44990","No alias","Oryza sativa","ercc6 protein, putative, expressed","protein_coding"
"LOC_Os01g46060","No alias","Oryza sativa","NUC189 domain containing protein, expressed","protein_coding"
"LOC_Os01g47730","No alias","Oryza sativa","ras-related protein, putative, expressed","protein_coding"
"LOC_Os01g49180","No alias","Oryza sativa","ATP dependent DNA ligase family protein, putative, expressed","protein_coding"
"LOC_Os01g49320","No alias","Oryza sativa","glycosyl hydrolase, putative, expressed","protein_coding"
"LOC_Os01g53690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g57510","No alias","Oryza sativa","receptor protein kinase, putative, expressed","protein_coding"
"LOC_Os01g58000","No alias","Oryza sativa","ATP synthase epsilon chain, putative, expressed","protein_coding"
"LOC_Os01g64310","No alias","Oryza sativa","no apical meristem protein, putative, expressed","protein_coding"
"LOC_Os01g65230","No alias","Oryza sativa","AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os01g67570","No alias","Oryza sativa","PDE312/PTAC10, putative, expressed","protein_coding"
"LOC_Os01g68460","No alias","Oryza sativa","DC1, putative, expressed","protein_coding"
"LOC_Os01g72940","No alias","Oryza sativa","phosphatidylserine decarboxylase, putative, expressed","protein_coding"
"LOC_Os02g01030","No alias","Oryza sativa","tetratricopeptide repeat domain containing protein, expressed","protein_coding"
"LOC_Os02g01180","No alias","Oryza sativa","kinesin motor domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g02424","No alias","Oryza sativa","ZOS2-02 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os02g04080","No alias","Oryza sativa","chromosome segregation protein sudA, putative, expressed","protein_coding"
"LOC_Os02g06490","No alias","Oryza sativa","vacuolar protein sorting-associated protein 4, putative, expressed","protein_coding"
"LOC_Os02g06592","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g08070","No alias","Oryza sativa","OsSPL5 - SBP-box gene family member, expressed","protein_coding"
"LOC_Os02g10790","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g14500","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g17190","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os02g18370","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g24100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g27340","No alias","Oryza sativa","riboflavin biosynthesis protein ribD, putative, expressed","protein_coding"
"LOC_Os02g28750","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass","protein_coding"
"LOC_Os02g39990","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g44540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g44570","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os02g45750","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os02g50140","No alias","Oryza sativa","caleosin related protein, putative, expressed","protein_coding"
"LOC_Os02g53384","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g54780","No alias","Oryza sativa","CYPRO4, putative, expressed","protein_coding"
"LOC_Os02g55200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g55720","No alias","Oryza sativa","cyclin, N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g58620","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os03g06490","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g07080","No alias","Oryza sativa","endonuclease/exonuclease/phosphatase family domain containing protein, expressed","protein_coding"
"LOC_Os03g10940","No alias","Oryza sativa","casein kinase II subunit alpha-2, putative, expressed","protein_coding"
"LOC_Os03g14600","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os03g16730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g16740","No alias","Oryza sativa","protein kinase APK1A, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g17060","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os03g17100","No alias","Oryza sativa","Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g17950","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g17970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g19390","No alias","Oryza sativa","TENA/THI-4 family protein, putative, expressed","protein_coding"
"LOC_Os03g19570","No alias","Oryza sativa","fip1 motif family protein, expressed","protein_coding"
"LOC_Os03g19830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g21600","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g25620","No alias","Oryza sativa","LTV1, putative, expressed","protein_coding"
"LOC_Os03g49340","No alias","Oryza sativa","transposon protein, putative, Mariner sub-class, expressed","protein_coding"
"LOC_Os03g50320","No alias","Oryza sativa","phosphatidylinositol 4-kinase PI4K, putative, expressed","protein_coding"
"LOC_Os03g52560","No alias","Oryza sativa","glycosyl hydrolases, putative, expressed","protein_coding"
"LOC_Os03g52700","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g54770","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os03g62010","No alias","Oryza sativa","harpin-induced protein 1 domain containing protein, expressed","protein_coding"
"LOC_Os03g62850","No alias","Oryza sativa","AMP-binding enzyme, putative, expressed","protein_coding"
"LOC_Os04g01490","No alias","Oryza sativa","zinc finger, C3HC4 type, domain containing protein, expressed","protein_coding"
"LOC_Os04g14360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g14730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g18590","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g22720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g23200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g40130","No alias","Oryza sativa","Rf1, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os04g47470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g49610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g50070","No alias","Oryza sativa","ZOS4-13 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os04g51190","No alias","Oryza sativa","growth-regulating factor, putative, expressed","protein_coding"
"LOC_Os04g51700","No alias","Oryza sativa","DNA ligase I, ATP-dependent family protein, expressed","protein_coding"
"LOC_Os04g52180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g59630","No alias","Oryza sativa","prenylcysteine oxidase 1 precursor, putative, expressed","protein_coding"
"LOC_Os05g02040","No alias","Oryza sativa","RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed","protein_coding"
"LOC_Os05g06460","No alias","Oryza sativa","dihydrolipoyl dehydrogenase, putative, expressed","protein_coding"
"LOC_Os05g06710","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os05g07980","No alias","Oryza sativa","DUF630/DUF632 domains containing protein, putative, expressed","protein_coding"
"LOC_Os05g22940","No alias","Oryza sativa","acetyl-CoA carboxylase, putative, expressed","protein_coding"
"LOC_Os05g23820","No alias","Oryza sativa","retrotransposon, putative, centromere-specific","protein_coding"
"LOC_Os05g25860","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g26040","No alias","Oryza sativa","pumilio-family RNA binding repeat containing protein, expressed","protein_coding"
"LOC_Os05g35266","No alias","Oryza sativa","galactosyltransferase, putative, expressed","protein_coding"
"LOC_Os05g49780","No alias","Oryza sativa","histone-like transcription factor and archaeal histone, putative, expressed","protein_coding"
"LOC_Os05g51500","No alias","Oryza sativa","eukaryotic translation initiation factor 5B, putative, expressed","protein_coding"
"LOC_Os06g02370","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g04490","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g05730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g05900","No alias","Oryza sativa","methyltransferase, putative, expressed","protein_coding"
"LOC_Os06g06270","No alias","Oryza sativa","transcription elongation factor 1, putative, expressed","protein_coding"
"LOC_Os06g09870","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g10880","No alias","Oryza sativa","bZIP transcription factor, putative, expressed","protein_coding"
"LOC_Os06g14170","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g15420","No alias","Oryza sativa","asparagine synthetase, putative, expressed","protein_coding"
"LOC_Os06g17050","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g19660","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os06g33810","No alias","Oryza sativa","zinc finger protein, putative, expressed","protein_coding"
"LOC_Os06g38970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g45550","No alias","Oryza sativa","retrotransposon protein, putative, LINE subclass, expressed","protein_coding"
"LOC_Os06g47300","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os06g51510","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g03020","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g05620","No alias","Oryza sativa","CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os07g05840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08729","No alias","Oryza sativa","ATP-dependent DNA helicase 2 subunit 1, putative, expressed","protein_coding"
"LOC_Os07g14270","No alias","Oryza sativa","calreticulin precursor protein, putative, expressed","protein_coding"
"LOC_Os07g28890","No alias","Oryza sativa","ethylene-responsive protein related, putative, expressed","protein_coding"
"LOC_Os07g29380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g33050","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g40300","No alias","Oryza sativa","ZOS7-10 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os07g43120","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g48270","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os08g02040","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g07210","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g08220","No alias","Oryza sativa","EDA16, putative, expressed","protein_coding"
"LOC_Os08g10730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g14400","No alias","Oryza sativa","homeobox domain containing protein, expressed","protein_coding"
"LOC_Os08g15090","No alias","Oryza sativa","diacylglycerol kinase catalytic domain family protein, expressed","protein_coding"
"LOC_Os08g19310","No alias","Oryza sativa","pentatricopeptide repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g21650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g29570","No alias","Oryza sativa","pleiotropic drug resistance protein 3, putative, expressed","protein_coding"
"LOC_Os08g32490","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g33210","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g34130","No alias","Oryza sativa","mitochondrial glycoprotein, putative, expressed","protein_coding"
"LOC_Os08g35670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g36450","No alias","Oryza sativa","transcription regulator, putative, expressed","protein_coding"
"LOC_Os08g38300","No alias","Oryza sativa","Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g39350","No alias","Oryza sativa","glycerophosphoryl diester phosphodiesterase family protein, putative, expressed","protein_coding"
"LOC_Os08g41420","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g07120","No alias","Oryza sativa","DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os09g19940","No alias","Oryza sativa","cwfJ-like family protein, putative, expressed","protein_coding"
"LOC_Os09g29420","No alias","Oryza sativa","queuine tRNA-ribosyltransferase, putative, expressed","protein_coding"
"LOC_Os09g38268","No alias","Oryza sativa","RNA polymerase IV largest subunit, putative, expressed","protein_coding"
"LOC_Os10g02530","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass","protein_coding"
"LOC_Os10g09200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g13630","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g16780","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os10g22380","No alias","Oryza sativa","glutamyl-tRNA synthetase, cytoplasmic, putative, expressed","protein_coding"
"LOC_Os10g22980","No alias","Oryza sativa","leucine rich repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g23940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g28310","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os10g29640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g34602","No alias","Oryza sativa","csAtPR5, putative, expressed","protein_coding"
"LOC_Os10g34750","No alias","Oryza sativa","LIG1 - Putative DNA ligase I, expressed","protein_coding"
"LOC_Os10g36950","No alias","Oryza sativa","DUF677 domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g40820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g01836","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os11g03220","No alias","Oryza sativa","RNA binding protein, putative, expressed","protein_coding"
"LOC_Os11g03570","No alias","Oryza sativa","protein of unknown function, DUF618 domain containing protein, expressed","protein_coding"
"LOC_Os11g07330","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g11310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g11520","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g13990","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding"
"LOC_Os11g15000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g29490","No alias","Oryza sativa","plasma membrane ATPase, putative, expressed","protein_coding"
"LOC_Os11g34270","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed","protein_coding"
"LOC_Os11g37790","No alias","Oryza sativa","mla, putative, expressed","protein_coding"
"LOC_Os11g39370","No alias","Oryza sativa","BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed","protein_coding"
"LOC_Os11g40530","No alias","Oryza sativa","LTPL162 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os11g41970","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os11g44540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g44680","No alias","Oryza sativa","calmodulin binding protein, putative, expressed","protein_coding"
"LOC_Os11g45590","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os11g47690","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os12g02950","No alias","Oryza sativa","EMB2748, putative, expressed","protein_coding"
"LOC_Os12g05080","No alias","Oryza sativa","PMR5, putative, expressed","protein_coding"
"LOC_Os12g05320","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g06120","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g06740","No alias","Oryza sativa","OsFBX440 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os12g08110","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os12g23090","No alias","Oryza sativa","no apical meristem protein, putative, expressed","protein_coding"
"LOC_Os12g34880","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g37100","No alias","Oryza sativa","pentatricopeptide repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g37880","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g41620","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os12g43000","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"Mp1g00340.1","No alias","Marchantia polymorpha","DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana (sp|q9m548|drm2_arath : 333.0) & Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 49.8)","protein_coding"
"Mp1g01390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g02140.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.2 transferase transferring aldehyde or ketonic group(50.2.2 : 163.9)","protein_coding"
"Mp1g03220.1","No alias","Marchantia polymorpha","Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana (sp|q9fps2|ubp25_arath : 331.0)","protein_coding"
"Mp1g06870.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana (sp|q9sz52|pp344_arath : 281.0)","protein_coding"
"Mp1g07220.1","No alias","Marchantia polymorpha","Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana (sp|c0lgq7|y4245_arath : 395.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 128.2)","protein_coding"
"Mp1g07230.1","No alias","Marchantia polymorpha","Ribonuclease 2 OS=Arabidopsis thaliana (sp|p42814|rns2_arath : 189.0)","protein_coding"
"Mp1g07320.1","No alias","Marchantia polymorpha","Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica (sp|q7xdq7|pirl8_orysj : 292.0)","protein_coding"
"Mp1g08920.1","No alias","Marchantia polymorpha","E3 ubiquitin ligase (PUB)","protein_coding"
"Mp1g09350.1","No alias","Marchantia polymorpha","ATP-binding protein CcmA of CCM cytochrome c maturation system (system I)","protein_coding"
"Mp1g09640.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g10760.1","No alias","Marchantia polymorpha","ACT domain-containing protein ACR9 OS=Arabidopsis thaliana (sp|o80644|acr9_arath : 331.0)","protein_coding"
"Mp1g11710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g15320.1","No alias","Marchantia polymorpha","DNA replication DNA ligase (LIG1). DNA ligase (LIG1)","protein_coding"
"Mp1g15730.1","No alias","Marchantia polymorpha","CDC20-type (APC/C)-dependent ubiquitination activator protein","protein_coding"
"Mp1g15830.1","No alias","Marchantia polymorpha","component SecY1 of thylakoid membrane Sec1 translocation system","protein_coding"
"Mp1g16910.1","No alias","Marchantia polymorpha","protein kinase (STN)","protein_coding"
"Mp1g16980.1","No alias","Marchantia polymorpha","Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana (sp|q940g0|tmn1_arath : 853.0)","protein_coding"
"Mp1g17490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g17990.1","No alias","Marchantia polymorpha","DNA ligase component LIG4 of LIG4-XRCC4 ligase complex","protein_coding"
"Mp1g18030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g18600.1","No alias","Marchantia polymorpha","Leucine-rich repeat protein 1 OS=Arabidopsis thaliana (sp|q9fpj5|lrr1_arath : 261.0)","protein_coding"
"Mp1g19380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g20280.1","No alias","Marchantia polymorpha","transcriptional co-activator (BET/GTE)","protein_coding"
"Mp1g21090.1","No alias","Marchantia polymorpha","Histidine kinase 1 OS=Arabidopsis thaliana (sp|q9sxl4|ahk1_arath : 726.0)","protein_coding"
"Mp1g21650.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana (sp|q9m907|pp217_arath : 232.0)","protein_coding"
"Mp1g21910.1","No alias","Marchantia polymorpha","arginine/ornithine transporter. solute transporter (MTCC)","protein_coding"
"Mp1g24440.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g25930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26310.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g28990.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g29220.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g29510.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g03830.1","No alias","Marchantia polymorpha","large subunit of TFIIIf transcription factor complex","protein_coding"
"Mp2g09200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g09560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g10110.1","No alias","Marchantia polymorpha","component NBA1 of BRCC DNA-damage response complex","protein_coding"
"Mp2g15790.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g17850.1","No alias","Marchantia polymorpha","EIN3-stabilizing factor (MHZ3)","protein_coding"
"Mp2g18500.1","No alias","Marchantia polymorpha","M3-class metalloprotease","protein_coding"
"Mp2g19810.1","No alias","Marchantia polymorpha","MAP-kinase phosphatase","protein_coding"
"Mp2g23150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g23970.1","No alias","Marchantia polymorpha","DNA ligase (LIG6)","protein_coding"
"Mp2g25420.1","No alias","Marchantia polymorpha","NUFIP snoRNP rRNA methylation complex assembly factor","protein_coding"
"Mp2g26180.1","No alias","Marchantia polymorpha","Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana (sp|c0lgi2|y1677_arath : 298.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 115.5)","protein_coding"
"Mp3g00910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g00920.1","No alias","Marchantia polymorpha","Probable transmembrane ascorbate ferrireductase 2 OS=Arabidopsis thaliana (sp|q9sws1|acfr2_arath : 178.0)","protein_coding"
"Mp3g05190.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana (sp|q9lq14|ppr96_arath : 350.0)","protein_coding"
"Mp3g05300.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g05520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g06120.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g06650.1","No alias","Marchantia polymorpha","Peroxidase 56 OS=Arabidopsis thaliana (sp|q9lxg3|per56_arath : 278.0)","protein_coding"
"Mp3g06660.1","No alias","Marchantia polymorpha","anion transporter (Fabaceae-N70)","protein_coding"
"Mp3g08300.1","No alias","Marchantia polymorpha","component COG1 of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Mp3g08740.1","No alias","Marchantia polymorpha","pyrophosphate-dependent phosphofructokinase","protein_coding"
"Mp3g09460.1","No alias","Marchantia polymorpha","circadian clock evening oscillator component TOC1 of circadian clock","protein_coding"
"Mp3g11890.1","No alias","Marchantia polymorpha","O-fucosyltransferase 1 OS=Arabidopsis thaliana (sp|q8w486|ofut1_arath : 601.0)","protein_coding"
"Mp3g12100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13850.1","No alias","Marchantia polymorpha","cohesin cofactor (PDS5)","protein_coding"
"Mp3g14570.1","No alias","Marchantia polymorpha","calcium-dependent anion channel (Ca-ClC)","protein_coding"
"Mp3g21280.1","No alias","Marchantia polymorpha","CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana (sp|q9lev3|cbsx3_arath : 236.0)","protein_coding"
"Mp3g22130.1","No alias","Marchantia polymorpha","Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana (sp|q9shi2|y1723_arath : 589.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 82.2)","protein_coding"
"Mp3g23170.1","No alias","Marchantia polymorpha","transcription factor (MYB)","protein_coding"
"Mp3g23360.1","No alias","Marchantia polymorpha","NUP107 scaffold nucleoporin of nuclear pore complex","protein_coding"
"Mp3g24990.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g25330.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g01610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g02250.1","No alias","Marchantia polymorpha","accessory component RHL1 of meiotic topoisomerase-VI complex","protein_coding"
"Mp4g02350.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g06940.1","No alias","Marchantia polymorpha","aspartate kinase","protein_coding"
"Mp4g07610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g09740.1","No alias","Marchantia polymorpha","mRNA cap methyltransferase","protein_coding"
"Mp4g10860.1","No alias","Marchantia polymorpha","phospholipase A1 (PC-PLA1)","protein_coding"
"Mp4g11860.1","No alias","Marchantia polymorpha","SH2 domain-containing protein A OS=Arabidopsis thaliana (sp|b5x561|sha_arath : 197.0)","protein_coding"
"Mp4g13950.1","No alias","Marchantia polymorpha","Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana (sp|p94078|mana1_arath : 1092.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 789.9)","protein_coding"
"Mp4g15800.1","No alias","Marchantia polymorpha","component RPL5 of LSU proteome component","protein_coding"
"Mp4g17930.1","No alias","Marchantia polymorpha","ubiquitin-conjugating E2 protein","protein_coding"
"Mp4g17960.1","No alias","Marchantia polymorpha","CDP-diacylglycerol synthase","protein_coding"
"Mp4g17990.1","No alias","Marchantia polymorpha","organic anion transporter (OATP)","protein_coding"
"Mp4g19750.1","No alias","Marchantia polymorpha","chaperone (Hsp90)","protein_coding"
"Mp5g00540.1","No alias","Marchantia polymorpha","subfamily ABCA transporter","protein_coding"
"Mp5g05550.1","No alias","Marchantia polymorpha","phosphodiesterase (PIG-O)","protein_coding"
"Mp5g06320.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g12280.1","No alias","Marchantia polymorpha","metal cation transporter (ZIP13)","protein_coding"
"Mp5g12640.1","No alias","Marchantia polymorpha","phosphatidylinositol 3,5-bisphosphate biosynthesis scaffold protein (VAC14)","protein_coding"
"Mp5g13250.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g14360.1","No alias","Marchantia polymorpha","ceramide kinase","protein_coding"
"Mp5g15080.1","No alias","Marchantia polymorpha","photosynthetic acclimation PBCP phosphatase","protein_coding"
"Mp5g16090.1","No alias","Marchantia polymorpha","scaffold protein NBP35 of cytosolic CIA system assembly phase","protein_coding"
"Mp5g16700.1","No alias","Marchantia polymorpha","STIG1/GRI precursor polypeptide","protein_coding"
"Mp5g16990.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 422.3) & Probable aldo-keto reductase 1 OS=Glycine max (sp|c6tbn2|akr1_soybn : 402.0)","protein_coding"
"Mp5g17610.1","No alias","Marchantia polymorpha","VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 183.0)","protein_coding"
"Mp5g17930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g18480.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g18670.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g21260.1","No alias","Marchantia polymorpha","subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V RNA polymerase","protein_coding"
"Mp5g22210.1","No alias","Marchantia polymorpha","prolyl hydroxylase","protein_coding"
"Mp5g23540.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g01090.1","No alias","Marchantia polymorpha","NUP205 scaffold nucleoporin of nuclear pore complex","protein_coding"
"Mp6g01950.1","No alias","Marchantia polymorpha","Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana (sp|q94k49|alp1_arath : 321.0)","protein_coding"
"Mp6g02270.1","No alias","Marchantia polymorpha","Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 100.0)","protein_coding"
"Mp6g02750.1","No alias","Marchantia polymorpha","component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex","protein_coding"
"Mp6g02760.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g04020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05640.1","No alias","Marchantia polymorpha","golgin (GC6)","protein_coding"
"Mp6g05860.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g06940.1","No alias","Marchantia polymorpha","beta-N-acetylhexosaminidase (HEXO)","protein_coding"
"Mp6g07230.1","No alias","Marchantia polymorpha","component UBP22 of SAGA transcription co-activator complex. ubiquitin-specific protease","protein_coding"
"Mp6g12280.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g12970.1","No alias","Marchantia polymorpha","RING-HC-class E3 ligase","protein_coding"
"Mp6g14350.1","No alias","Marchantia polymorpha","BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana (sp|q9srv1|bpm4_arath : 211.0)","protein_coding"
"Mp6g14630.1","No alias","Marchantia polymorpha","Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica (sp|q9zts1|sym_orysj : 115.0)","protein_coding"
"Mp6g14750.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g16930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g17270.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g17370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g17450.1","No alias","Marchantia polymorpha","CCG-interacting transcriptional regulator (CBP)","protein_coding"
"Mp6g19200.1","No alias","Marchantia polymorpha","Reticulon-like protein B22 OS=Arabidopsis thaliana (sp|q8gwh5|rtnlt_arath : 142.0)","protein_coding"
"Mp6g21080.1","No alias","Marchantia polymorpha","metabolite transporter (DTX)","protein_coding"
"Mp6g21330.1","No alias","Marchantia polymorpha","DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana (sp|q39211|nrpb3_arath : 114.0)","protein_coding"
"Mp7g00250.1","No alias","Marchantia polymorpha","RNA helicase (Brr2)","protein_coding"
"Mp7g00410.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g01290.1","No alias","Marchantia polymorpha","component GCP6 of gamma-Tubulin ring complex (gamma-TuRC)","protein_coding"
"Mp7g02630.1","No alias","Marchantia polymorpha","Acid beta-fructofuranosidase 2, vacuolar OS=Rosa hybrid cultivar (sp|h2df88|rhvi2_roshc : 521.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 466.2)","protein_coding"
"Mp7g05820.1","No alias","Marchantia polymorpha","lycopene epsilon cyclase (LCY-e)","protein_coding"
"Mp7g06140.1","No alias","Marchantia polymorpha","Peptide methionine sulfoxide reductase B1, chloroplastic OS=Arabidopsis thaliana (sp|q9c8m2|msrb1_arath : 211.0)","protein_coding"
"Mp7g08170.1","No alias","Marchantia polymorpha","protein kinase (Extensin)","protein_coding"
"Mp7g08970.1","No alias","Marchantia polymorpha","Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana (sp|q9sf32|iqd1_arath : 83.6)","protein_coding"
"Mp7g10850.1","No alias","Marchantia polymorpha","ER membrane protein complex subunit 7 homolog OS=Arabidopsis thaliana (sp|q8vy97|y4213_arath : 155.0)","protein_coding"
"Mp7g16120.1","No alias","Marchantia polymorpha","monomeric E3 ubiquitin ligase (HECT)","protein_coding"
"Mp7g17880.1","No alias","Marchantia polymorpha","Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 236.0)","protein_coding"
"Mp7g18950.1","No alias","Marchantia polymorpha","Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana (sp|q9svl6|crpm2_arath : 154.0)","protein_coding"
"Mp8g01570.1","No alias","Marchantia polymorpha","GEMIN2 spliceosome assembly factor","protein_coding"
"Mp8g03230.1","No alias","Marchantia polymorpha","S-adenosyl methionine synthetase","protein_coding"
"Mp8g04250.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g05570.1","No alias","Marchantia polymorpha","Plant UBX domain-containing protein 2 OS=Arabidopsis thaliana (sp|q9zu93|pux2_arath : 226.0)","protein_coding"
"Mp8g07550.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g09590.1","No alias","Marchantia polymorpha","Cationic peroxidase 2 OS=Arachis hypogaea (sp|p22196|per2_arahy : 265.0)","protein_coding"
"Mp8g10640.1","No alias","Marchantia polymorpha","transcription factor (WRKY)","protein_coding"
"Mp8g10690.1","No alias","Marchantia polymorpha","component FBX of SCF E3 ubiquitin ligase complex","protein_coding"
"Mp8g11150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g11780.1","No alias","Marchantia polymorpha","protein kinase (LysM)","protein_coding"
"Mp8g12350.1","No alias","Marchantia polymorpha","F-box only protein 6 OS=Arabidopsis thaliana (sp|q9fzk1|fbx6_arath : 154.0)","protein_coding"
"Mp8g13150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g14990.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g18980.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 266.7) & Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana (sp|q8lf99|xth6_arath : 260.0)","protein_coding"
"Potri.004G094200","No alias","Populus trichocarpa","DNA LIGASE 6","protein_coding"
"Potri.004G094300","No alias","Populus trichocarpa","DNA LIGASE 6","protein_coding"
"Potri.009G005900","No alias","Populus trichocarpa","DNA ligase 1","protein_coding"
"Potri.018G141900","No alias","Populus trichocarpa","DNA ligase IV","protein_coding"
"Pp1s100_27V6","No alias","Physcomitrella patens","ccnd1; cyclin D1 [KO:K04503] [Danio rerio]","protein_coding"
"Pp1s100_38V6","No alias","Physcomitrella patens","MGI19.12; ser/thr protein phosphatase catalytic subunit [Arabidopsis thaliana]","protein_coding"
"Pp1s102_17V6","No alias","Physcomitrella patens","u3 small nucleolar ribonucleoprotein protein","protein_coding"
"Pp1s104_95V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s110_112V6","No alias","Physcomitrella patens","latex cyanogenic beta glucosidase","protein_coding"
"Pp1s114_129V6","No alias","Physcomitrella patens","precursor of carboxylase h-protein glycine decarboxylase complex","protein_coding"
"Pp1s114_23V6","No alias","Physcomitrella patens","MJK13.21; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s120_78V6","No alias","Physcomitrella patens","ankyrin repeat family protein","protein_coding"
"Pp1s127_45V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s130_196V6","No alias","Physcomitrella patens","methyltransferase","protein_coding"
"Pp1s143_16V6","No alias","Physcomitrella patens","trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase","protein_coding"
"Pp1s147_5V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s147_77V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s150_94V6","No alias","Physcomitrella patens","dna ligase iv","protein_coding"
"Pp1s158_184V6","No alias","Physcomitrella patens","fiber protein fb34","protein_coding"
"Pp1s162_138V6","No alias","Physcomitrella patens","hypothetical protein OsI_15301 [Oryza sativa Indica Group]","protein_coding"
"Pp1s16_84V6","No alias","Physcomitrella patens","putative photoreceptor-interacting protein-like protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s198_96V6","No alias","Physcomitrella patens","formamidase-like protein","protein_coding"
"Pp1s19_321V6","No alias","Physcomitrella patens","F24D13.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s203_94V6","No alias","Physcomitrella patens","F27G19.60; CBS domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s208_129V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s21_302V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s223_54V6","No alias","Physcomitrella patens","T6D22.23; DNA ligase / polydeoxyribonucleotide synthase [ATP] [EC:6.5.1.1] [KO:K01971] [Arabidopsis thaliana]","protein_coding"
"Pp1s22_265V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s22_362V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s22_42V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s257_5V6","No alias","Physcomitrella patens","F25E4.180; bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s25_344V6","No alias","Physcomitrella patens","LOC476430; similar to BC282485_1 [Canis familiaris]","protein_coding"
"Pp1s26_104V6","No alias","Physcomitrella patens","proteophosphoglycan ppg4 [Leishmania major]","protein_coding"
"Pp1s297_57V6","No alias","Physcomitrella patens","trna:pseudouridine introduces pseudouridines at positions 26- 34- and 67 of trna","protein_coding"
"Pp1s29_139V6","No alias","Physcomitrella patens","splicing factorsubunit 2","protein_coding"
"Pp1s2_25V6","No alias","Physcomitrella patens","chromosome transmission fidelity","protein_coding"
"Pp1s303_47V6","No alias","Physcomitrella patens","F2C19.1; SPP30 - like protein [Arabidopsis thaliana]","protein_coding"
"Pp1s306_66V6","No alias","Physcomitrella patens","T2K10.11; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s309_86V6","No alias","Physcomitrella patens","chitinase 1","protein_coding"
"Pp1s31_293V6","No alias","Physcomitrella patens","T27I1.12; protein prenyltransferase alpha subunit-related [Arabidopsis thaliana]","protein_coding"
"Pp1s33_94V6","No alias","Physcomitrella patens","alpha beta fold family expressed","protein_coding"
"Pp1s371_13V6","No alias","Physcomitrella patens","transcriptional corepressor leunig","protein_coding"
"Pp1s372_61V6","No alias","Physcomitrella patens","F9I5.19; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s376_11V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s397_37V6","No alias","Physcomitrella patens","contains ESTs C22366(C11876),C22365(C11876) [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s3_98V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s401_17V6","No alias","Physcomitrella patens","phosphatidylinositol class t","protein_coding"
"Pp1s406_15V6","No alias","Physcomitrella patens","F3N23.23; SNF7 family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s40_227V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s415_16V6","No alias","Physcomitrella patens","t-dirnahydrouridine synthase","protein_coding"
"Pp1s42_48V6","No alias","Physcomitrella patens","1-deoxy-d-xylulose-5-phosphate synthase","protein_coding"
"Pp1s449_14V6","No alias","Physcomitrella patens","F26O13.160; diacylglycerol acyltransferase family [Arabidopsis thaliana]","protein_coding"
"Pp1s465_1V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s47_178V6","No alias","Physcomitrella patens","afadin- and alpha-actinin-binding","protein_coding"
"Pp1s48_17V6","No alias","Physcomitrella patens","td and poz domain containing 2","protein_coding"
"Pp1s49_45V6","No alias","Physcomitrella patens","dna nad-dependent","protein_coding"
"Pp1s54_206V6","No alias","Physcomitrella patens","-dimethyl-8-ribityllumazine synthase","protein_coding"
"Pp1s55_95V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s57_192V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s5_150V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s63_200V6","No alias","Physcomitrella patens","F16N3.18; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s67_50V6","No alias","Physcomitrella patens","-dihydroxy-2-butanone kinase","protein_coding"
"Pp1s68_4V6","No alias","Physcomitrella patens","F14D16.32; DNA cross-link repair protein-related [Arabidopsis thaliana]","protein_coding"
"Pp1s69_163V6","No alias","Physcomitrella patens","T29A15.240; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s70_107V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s71_349V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s75_54V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s76_66V6","No alias","Physcomitrella patens","F24J1.31; myb family transcription factor (MYB105) [Arabidopsis thaliana]","protein_coding"
"Pp1s791_3V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s79_120V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s7_98V6","No alias","Physcomitrella patens","undecaprenyl diphosphate synthase","protein_coding"
"Pp1s83_218V6","No alias","Physcomitrella patens","dna-directed rna polymerases iii kda","protein_coding"
"Pp1s8_307V6","No alias","Physcomitrella patens","dna binding protein","protein_coding"
"Pp1s91_136V6","No alias","Physcomitrella patens","xyloglucan 6-","protein_coding"
"Pp1s96_246V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s97_91V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s9_78V6","No alias","Physcomitrella patens","ac074354_15 beta-glucosidase","protein_coding"
"PSME_00001210-RA","No alias","Pseudotsuga menziesii","(at1g78060 : 831.0) Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT5G10560.1); Has 9183 Blast hits to 7917 proteins in 1177 species: Archae - 63; Bacteria - 5533; Metazoa - 16; Fungi - 1604; Plants - 525; Viruses - 0; Other Eukaryotes - 1442 (source: NCBI BLink). & (p83344|xynb_prupe : 392.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 1662.0) &  (original description: no original description)","protein_coding"
"PSME_00001638-RA","No alias","Pseudotsuga menziesii","(at1g30110 : 114.0) nudix hydrolase homolog 25 (NUDX25); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00001822-RA","No alias","Pseudotsuga menziesii","(at1g55860 : 89.4) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"PSME_00002182-RA","No alias","Pseudotsuga menziesii","(at4g16700 : 130.0) Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.; phosphatidylserine decarboxylase 1 (PSD1); FUNCTIONS IN: phosphatidylserine decarboxylase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylserine decarboxylase-related (InterPro:IPR003817), Phosphatidylserine decarboxylase (InterPro:IPR005221); Has 2996 Blast hits to 2984 proteins in 1194 species: Archae - 0; Bacteria - 2050; Metazoa - 197; Fungi - 312; Plants - 68; Viruses - 0; Other Eukaryotes - 369 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00002411-RA","No alias","Pseudotsuga menziesii","(at1g78690 : 315.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.2); Has 1059 Blast hits to 1041 proteins in 400 species: Archae - 0; Bacteria - 447; Metazoa - 249; Fungi - 138; Plants - 116; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00002991-RA","No alias","Pseudotsuga menziesii","(at5g38380 : 330.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 109 Blast hits to 107 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"PSME_00003283-RA","No alias","Pseudotsuga menziesii","(at2g22660 : 261.0) Protein of unknown function (duplicated DUF1399); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT4G37900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00003618-RA","No alias","Pseudotsuga menziesii","(at1g45180 : 90.9) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G42940.1); Has 9233 Blast hits to 9191 proteins in 302 species: Archae - 0; Bacteria - 44; Metazoa - 2582; Fungi - 701; Plants - 4328; Viruses - 54; Other Eukaryotes - 1524 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00003897-RA","No alias","Pseudotsuga menziesii","(at5g43810 : 374.0) Encodes a member of the EIF2C (elongation initiation factor 2c)/  Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.; ZWILLE (ZLL); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1). & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"PSME_00003964-RA","No alias","Pseudotsuga menziesii","(at5g01500 : 289.0) encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover; thylakoid ATP/ADP carrier (TAAC); FUNCTIONS IN: binding, transporter activity, ATP transmembrane transporter activity; INVOLVED IN: photosystem II repair, transport, photoprotection; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G51870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p29518|bt1_maize : 94.7) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"PSME_00004430-RA","No alias","Pseudotsuga menziesii","(at1g10490 : 149.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain  of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00008254-RA","No alias","Pseudotsuga menziesii","(at4g32390 : 451.0) Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT2G25520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00009132-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 429.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of  the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00009173-RA","No alias","Pseudotsuga menziesii","(at1g06950 : 551.0) Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.; translocon at the inner envelope membrane of chloroplasts 110 (TIC110); INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: chloroplast, membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 131 Blast hits to 118 proteins in 52 species: Archae - 4; Bacteria - 6; Metazoa - 16; Fungi - 9; Plants - 66; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 1102.0) &  (original description: no original description)","protein_coding"
"PSME_00009202-RA","No alias","Pseudotsuga menziesii","(at2g17695 : 125.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00009684-RA","No alias","Pseudotsuga menziesii","(q7x7e9|dnl4_orysa : 92.8) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (at5g33406 : 89.7) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"PSME_00011008-RA","No alias","Pseudotsuga menziesii","(at5g48460 : 177.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actinin-type, actin-binding, conserved site (InterPro:IPR001589), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00011060-RA","No alias","Pseudotsuga menziesii","(at1g23400 : 167.0) Promotes the splicing of chloroplast group II introns.; CAF2; FUNCTIONS IN: RNA binding; INVOLVED IN: Group II intron splicing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT2G20020.1); Has 265 Blast hits to 223 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 261; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00012117-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012405-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00014493-RA","No alias","Pseudotsuga menziesii","(at1g35720 : 354.0) Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, &#946;-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress.  Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion.; annexin 1 (ANNAT1); FUNCTIONS IN: in 7 functions; INVOLVED IN: in 8 processes; LOCATED IN: in 10 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 2 (TAIR:AT5G65020.1); Has 3809 Blast hits to 2217 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 2893; Fungi - 160; Plants - 482; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink). & (p51074|anx4_fraan : 346.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 708.0) &  (original description: no original description)","protein_coding"
"PSME_00014595-RA","No alias","Pseudotsuga menziesii","(at5g63010 : 162.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G32950.1); Has 4234 Blast hits to 3983 proteins in 322 species: Archae - 2; Bacteria - 280; Metazoa - 1738; Fungi - 841; Plants - 754; Viruses - 0; Other Eukaryotes - 619 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00014945-RA","No alias","Pseudotsuga menziesii","(at2g34355 : 92.8) Major facilitator superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Nodulin-like / Major Facilitator Superfamily protein (TAIR:AT2G34350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00016551-RA","No alias","Pseudotsuga menziesii","(at2g45360 : 106.0) Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT3G60780.1); Has 113 Blast hits to 112 proteins in 16 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00016626-RA","No alias","Pseudotsuga menziesii","(at1g70750 : 112.0) Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT5G16720.1); Has 8718 Blast hits to 6591 proteins in 581 species: Archae - 113; Bacteria - 587; Metazoa - 3699; Fungi - 664; Plants - 753; Viruses - 66; Other Eukaryotes - 2836 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00016789-RA","No alias","Pseudotsuga menziesii","(at1g66730 : 191.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00016790-RA","No alias","Pseudotsuga menziesii","(at1g66730 : 662.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (reliability: 1324.0) &  (original description: no original description)","protein_coding"
"PSME_00018024-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019025-RA","No alias","Pseudotsuga menziesii","(at2g31400 : 183.0) Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.; genomes uncoupled 1 (GUN1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2 (TAIR:AT1G74850.1); Has 66090 Blast hits to 15992 proteins in 322 species: Archae - 5; Bacteria - 98; Metazoa - 1298; Fungi - 977; Plants - 60012; Viruses - 1; Other Eukaryotes - 3699 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"PSME_00020198-RA","No alias","Pseudotsuga menziesii","(at1g08130 : 117.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"PSME_00020426-RA","No alias","Pseudotsuga menziesii","(at1g56120 : 122.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 185204 Blast hits to 134213 proteins in 4803 species: Archae - 129; Bacteria - 16314; Metazoa - 50838; Fungi - 10579; Plants - 84868; Viruses - 447; Other Eukaryotes - 22029 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00020797-RA","No alias","Pseudotsuga menziesii","(at1g68760 : 170.0) Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway.; nudix hydrolase  1 (NUDX1); FUNCTIONS IN: hydrolase activity, dihydroneopterin triphosphate pyrophosphohydrolase activity, 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity; INVOLVED IN: response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 6319 Blast hits to 6317 proteins in 1575 species: Archae - 191; Bacteria - 5327; Metazoa - 193; Fungi - 66; Plants - 51; Viruses - 14; Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"PSME_00021631-RA","No alias","Pseudotsuga menziesii","(at3g23780 : 373.0) This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.; nuclear RNA polymerase D2A (NRPD2A); CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2B (TAIR:AT3G18090.1). & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"PSME_00021632-RA","No alias","Pseudotsuga menziesii","(at3g18090 : 612.0) Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.; nuclear RNA polymerase D2B (NRPD2B); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase D2A (TAIR:AT3G23780.2); Has 34356 Blast hits to 27293 proteins in 9050 species: Archae - 497; Bacteria - 15729; Metazoa - 585; Fungi - 7161; Plants - 2537; Viruses - 228; Other Eukaryotes - 7619 (source: NCBI BLink). & (p60283|rpob_phypa : 144.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Physcomitrella patens (Moss) & (reliability: 1224.0) &  (original description: no original description)","protein_coding"
"PSME_00023039-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023209-RA","No alias","Pseudotsuga menziesii","(at1g52980 : 454.0) GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink). & (reliability: 908.0) &  (original description: no original description)","protein_coding"
"PSME_00023300-RA","No alias","Pseudotsuga menziesii","(at5g58160 : 182.0) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 66030 Blast hits to 44960 proteins in 1807 species: Archae - 80; Bacteria - 11670; Metazoa - 27723; Fungi - 9802; Plants - 6854; Viruses - 1874; Other Eukaryotes - 8027 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00023670-RA","No alias","Pseudotsuga menziesii","(at2g47940 : 270.0) Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.; DEGP protease 2 (DEGP2); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 9 (TAIR:AT5G40200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"PSME_00024320-RA","No alias","Pseudotsuga menziesii","(at1g07840 : 238.0) Sas10/Utp3/C1D family; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00024477-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025569-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 364.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"PSME_00026307-RA","No alias","Pseudotsuga menziesii","(at1g31410 : 328.0) putrescine-binding periplasmic protein-related; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial periplasmic spermidine/putrescine-binding protein (InterPro:IPR001188), Bacterial extracellular solute-binding, family 1 (InterPro:IPR006059); Has 4685 Blast hits to 4685 proteins in 1552 species: Archae - 5; Bacteria - 4396; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (reliability: 656.0) &  (original description: no original description)","protein_coding"
"PSME_00027565-RA","No alias","Pseudotsuga menziesii","(at4g17300 : 564.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 1128.0) &  (original description: no original description)","protein_coding"
"PSME_00027590-RA","No alias","Pseudotsuga menziesii","(at4g02730 : 436.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 105879 Blast hits to 41942 proteins in 964 species: Archae - 68; Bacteria - 10657; Metazoa - 43181; Fungi - 22509; Plants - 14298; Viruses - 12; Other Eukaryotes - 15154 (source: NCBI BLink). & (p25387|gblp_chlre : 116.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"PSME_00029952-RA","No alias","Pseudotsuga menziesii","(at1g62640 : 316.0) 3-ketoacyl-acyl carrier protein synthase III (KAS III); 3-ketoacyl-acyl carrier protein synthase III (KAS III); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, 3-oxoacyl-[acyl-carrier-protein] synthase activity, catalytic activity; INVOLVED IN: lipid biosynthetic process, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751), Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q07510|fabh_spiol : 315.0) 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) - Spinacia oleracea (Spinach) & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"PSME_00031612-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00032236-RA","No alias","Pseudotsuga menziesii","(at1g59830 : 253.0) Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].; protein phosphatase 2A-2 (PP2A-1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-2 (TAIR:AT1G10430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xgt7|pp2a3_orysa : 251.0) Serine/threonine-protein phosphatase PP2A-3 catalytic subunit (EC 3.1.3.16) - Oryza sativa (Rice) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00033055-RA","No alias","Pseudotsuga menziesii","(at4g25450 : 259.0) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 189.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00034552-RA","No alias","Pseudotsuga menziesii","(at3g44670 : 82.4) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response to bacterium, defense response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 43078 Blast hits to 25516 proteins in 938 species: Archae - 40; Bacteria - 3512; Metazoa - 4196; Fungi - 281; Plants - 32050; Viruses - 26; Other Eukaryotes - 2973 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"PSME_00034801-RA","No alias","Pseudotsuga menziesii","(at1g05170 : 558.0) Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 1062.0) &  (original description: no original description)","protein_coding"
"PSME_00036794-RA","No alias","Pseudotsuga menziesii","(at2g42270 : 264.0) U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2); Has 20124 Blast hits to 12378 proteins in 1898 species: Archae - 1780; Bacteria - 8009; Metazoa - 2781; Fungi - 2333; Plants - 1088; Viruses - 52; Other Eukaryotes - 4081 (source: NCBI BLink). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"PSME_00037637-RA","No alias","Pseudotsuga menziesii","(p25776|orya_orysa : 269.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (at3g19390 : 268.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 9061 Blast hits to 8168 proteins in 770 species: Archae - 67; Bacteria - 297; Metazoa - 4335; Fungi - 6; Plants - 1937; Viruses - 140; Other Eukaryotes - 2279 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00038179-RA","No alias","Pseudotsuga menziesii","(at4g31860 : 219.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G25070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00038295-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 524.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"PSME_00039646-RA","No alias","Pseudotsuga menziesii","(at3g01410 : 145.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 3179 Blast hits to 3179 proteins in 588 species: Archae - 77; Bacteria - 1109; Metazoa - 13; Fungi - 0; Plants - 1505; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00041666-RA","No alias","Pseudotsuga menziesii","(at1g74910 : 258.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00041826-RA","No alias","Pseudotsuga menziesii","(at1g54385 : 224.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G03970.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|68872 : 93.6) no description available & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00041857-RA","No alias","Pseudotsuga menziesii","(p31251|ube12_wheat : 1366.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at5g06460 : 1355.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2710.0) &  (original description: no original description)","protein_coding"
"PSME_00043445-RA","No alias","Pseudotsuga menziesii","(at5g46330 : 407.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response.  FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 310.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"PSME_00043470-RA","No alias","Pseudotsuga menziesii","(at2g30280 : 116.0) Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development.; RNA-directed DNA methylation 4 (RDM4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1762 (InterPro:IPR013883); Has 44351 Blast hits to 18281 proteins in 1030 species: Archae - 135; Bacteria - 13377; Metazoa - 12547; Fungi - 4712; Plants - 1881; Viruses - 609; Other Eukaryotes - 11090 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"PSME_00043895-RA","No alias","Pseudotsuga menziesii","(at5g65760 : 259.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00044837-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00045103-RA","No alias","Pseudotsuga menziesii","(at5g17240 : 238.0) SET domain group 40 (SDG40); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain-containing protein (TAIR:AT3G55080.1); Has 770 Blast hits to 763 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 160; Plants - 288; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00045374-RA","No alias","Pseudotsuga menziesii","(at5g41460 : 594.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1188.0) &  (original description: no original description)","protein_coding"
"PSME_00046097-RA","No alias","Pseudotsuga menziesii","(at3g27460 : 99.4) SGF29 tudor-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SAGA-associated factor 29 (InterPro:IPR010750); BEST Arabidopsis thaliana protein match is: SGF29 tudor-like domain (TAIR:AT5G40550.2); Has 324 Blast hits to 324 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 113; Plants - 51; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"PSME_00047658-RA","No alias","Pseudotsuga menziesii","(at2g44050 : 103.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 89.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00050654-RA","No alias","Pseudotsuga menziesii","(at2g39270 : 249.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; CONTAINS InterPro DOMAIN/s: Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine kinase (TAIR:AT2G37250.1); Has 14804 Blast hits to 14657 proteins in 5112 species: Archae - 98; Bacteria - 9940; Metazoa - 1188; Fungi - 469; Plants - 459; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (q8hsw1|kadc_soltu : 247.0) Adenylate kinase, chloroplast precursor (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Solanum tuberosum (Potato) & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00052098-RA","No alias","Pseudotsuga menziesii","(at3g47090 : 579.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 436.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"PSME_00053986-RA","No alias","Pseudotsuga menziesii","(at5g19440 : 181.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51109|dfra_medsa : 91.3) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00056428-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 606.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 110.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1212.0) &  (original description: no original description)","protein_coding"
"Seita.1G000400.1","No alias","Setaria italica ","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Seita.1G007300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G019300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G024700.1","No alias","Setaria italica ","scaffold component of spliceosomal snRNP assembly complex","protein_coding"
"Seita.1G045800.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.1G050200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G092100.1","No alias","Setaria italica ","arginine methyltransferase *(PRMT5/CAU1) & histone methylase *(CAU1/PRMT5)","protein_coding"
"Seita.1G099300.1","No alias","Setaria italica ","component *(SWIB) of SWI-B chromatin-remodeling complexes","protein_coding"
"Seita.1G102900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G109700.1","No alias","Setaria italica ","bifunctional 5,10-methylene-THF dehydrogenase and 5,10-methenyl-THF cyclohydrolase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Seita.1G147800.1","No alias","Setaria italica ","component *(mS35) of small mitoribosomal-subunit proteome","protein_coding"
"Seita.1G170900.1","No alias","Setaria italica ","telomeric dsDNA-binding protein","protein_coding"
"Seita.1G190100.1","No alias","Setaria italica ","MYB-RELATED transcription factor *(DRMY)","protein_coding"
"Seita.1G209600.1","No alias","Setaria italica ","E3 ubiquitin ligase component *(HRD1) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Seita.1G282900.1","No alias","Setaria italica ","histone demethylase *(PKDM8)","protein_coding"
"Seita.1G305200.1","No alias","Setaria italica ","pre-40S ribosomal subunit assembly factor *(RRP7)","protein_coding"
"Seita.1G348400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G357000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G361100.1","No alias","Setaria italica ","component *(eIF2B-epsilon) of eIF2B eIF2-GDP recycling complex","protein_coding"
"Seita.1G374000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G375000.1","No alias","Setaria italica ","component *(SF3B2) of splicing factor 3B complex","protein_coding"
"Seita.1G377700.1","No alias","Setaria italica ","regulatory E3 ubiquitin ligase *(LUNAPARK)","protein_coding"
"Seita.2G001200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G001700.1","No alias","Setaria italica ","regulatory protein *(SRFR) of TNL-mediated effector-triggered immunity","protein_coding"
"Seita.2G044300.1","No alias","Setaria italica ","component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Seita.2G048200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G077000.1","No alias","Setaria italica ","SSU processome assembly factor *(RRP5)","protein_coding"
"Seita.2G108200.1","No alias","Setaria italica ","nucleoporin of nuclear pore complex *(NUP54)","protein_coding"
"Seita.2G119800.1","No alias","Setaria italica ","E3 ubiquitin ligase *(XBAT3)","protein_coding"
"Seita.2G124700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G131700.1","No alias","Setaria italica ","sterol delta14 reductase & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Seita.2G140000.1","No alias","Setaria italica ","triacylglycerol lipase *(LIP)","protein_coding"
"Seita.2G145100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G145500.1","No alias","Setaria italica ","mRNA poly-A-tail binding factor *(PABP)","protein_coding"
"Seita.2G148500.1","No alias","Setaria italica ","class-III histone methyltransferase *(Trx)","protein_coding"
"Seita.2G151400.1","No alias","Setaria italica ","component *(bL19m) of large mitoribosomal-subunit proteome","protein_coding"
"Seita.2G155900.1","No alias","Setaria italica ","nuclear-encoded organellar RNA polymerase *(NEP)","protein_coding"
"Seita.2G165900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G178000.1","No alias","Setaria italica ","component *(NOC1) of ribosomal-subunit proteome nuclear export complex","protein_coding"
"Seita.2G192700.1","No alias","Setaria italica ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Seita.2G210000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G260600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G269500.1","No alias","Setaria italica ","class I ARF-GAP ARF-GTPase-activating protein","protein_coding"
"Seita.2G273300.1","No alias","Setaria italica ","regulatory protein *(THAL) of rRNA transcription control","protein_coding"
"Seita.2G279700.1","No alias","Setaria italica ","canonical Holliday junction resolvase *(GEN1)","protein_coding"
"Seita.2G286700.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & pantothenate kinase","protein_coding"
"Seita.2G288800.1","No alias","Setaria italica ","AP-endonuclease *(APE2)","protein_coding"
"Seita.2G294200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G294600.1","No alias","Setaria italica ","monofunctional enoyl-CoA hydratase","protein_coding"
"Seita.2G304400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G326000.1","No alias","Setaria italica ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Seita.2G335000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G382300.1","No alias","Setaria italica ","component *(mL104) of large mitoribosomal-subunit proteome & regulatory protein *(PNM1) of mitochondrial translation machinery","protein_coding"
"Seita.2G401600.1","No alias","Setaria italica ","component *(MTR3/RRP41L) of exosome EXO9 core complex","protein_coding"
"Seita.2G405000.1","No alias","Setaria italica ","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Seita.2G405800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G413900.1","No alias","Setaria italica ","rRNA biogenesis RNA helicase *(ROK1)","protein_coding"
"Seita.2G430500.1","No alias","Setaria italica ","monofunctionial hydroxyacyl-CoA dehydrogenase","protein_coding"
"Seita.2G440400.1","No alias","Setaria italica ","LON-type protease","protein_coding"
"Seita.2G443400.1","No alias","Setaria italica ","component *(Symplekin/Pta1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Seita.2G445400.1","No alias","Setaria italica ","transposon-derived factor HDP1","protein_coding"
"Seita.3G003600.1","No alias","Setaria italica ","component *(SGT2) of GET4-GET5 scaffold subcomplex","protein_coding"
"Seita.3G016500.1","No alias","Setaria italica ","dihydroorotate dehydrogenase *(PYRD) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Seita.3G028900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G058800.1","No alias","Setaria italica ","pre-60S ribosomal subunit assembly factor *(SMO4)","protein_coding"
"Seita.3G066900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G107800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G108300.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & glutamine-tRNA ligase","protein_coding"
"Seita.3G137300.1","No alias","Setaria italica ","RNA editing factor *(ECB2/VAC1)","protein_coding"
"Seita.3G164600.1","No alias","Setaria italica ","beta-galactosidase *(BGAL17) & EC_3.2 glycosylase","protein_coding"
"Seita.3G184700.1","No alias","Setaria italica ","TruD-type tRNA pseudouridine synthase","protein_coding"
"Seita.3G217600.1","No alias","Setaria italica ","R1R2R3-MYB transcription factor","protein_coding"
"Seita.3G232200.1","No alias","Setaria italica ","multisubstrate deoxyribonucleoside kinase *(TK2) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.3G265000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G281100.1","No alias","Setaria italica ","auxiliary component *(NAA25) of NatB N-terminal acetylase complex","protein_coding"
"Seita.3G288400.1","No alias","Setaria italica ","component *(S2Lb/SWD2) of COMPASS histone trimethylation complex","protein_coding"
"Seita.3G311200.1","No alias","Setaria italica ","scaffold factor *(COILIN) of Cajal body formation","protein_coding"
"Seita.3G322400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G331500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G361700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G381500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G002700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G007700.1","No alias","Setaria italica ","starch synthase *(SS5)","protein_coding"
"Seita.4G009200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G012800.1","No alias","Setaria italica ","RNA editing factor *(MORF)","protein_coding"
"Seita.4G020900.1","No alias","Setaria italica ","spindle assembly checkpoint protein *(TANMEI)","protein_coding"
"Seita.4G027500.1","No alias","Setaria italica ","methionine S-enantiomer sulfoxide reductase *(MsrA) & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Seita.4G049200.1","No alias","Setaria italica ","deubiquitinase *(UBP23)","protein_coding"
"Seita.4G055300.1","No alias","Setaria italica ","component *(uS15m) of small mitoribosomal-subunit proteome","protein_coding"
"Seita.4G057700.1","No alias","Setaria italica ","endonuclease *(FAN1)","protein_coding"
"Seita.4G070000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G081000.1","No alias","Setaria italica ","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Seita.4G119000.1","No alias","Setaria italica ","histone demethylase *(PKDM7)","protein_coding"
"Seita.4G124200.1","No alias","Setaria italica ","type-Ia DNA topoisomerase","protein_coding"
"Seita.4G149300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G167800.1","No alias","Setaria italica ","mRNA helicase *(RH31)","protein_coding"
"Seita.4G196300.1","No alias","Setaria italica ","component *(TAF5) of SAGA transcription co-activator complex","protein_coding"
"Seita.4G200700.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & isoleucine-tRNA ligase","protein_coding"
"Seita.4G201200.1","No alias","Setaria italica ","protein S-acyltransferase *(PAT23/24)","protein_coding"
"Seita.4G217700.1","No alias","Setaria italica ","component *(NRPA1) of RNA polymerase I complex","protein_coding"
"Seita.4G265700.1","No alias","Setaria italica ","DNA primase and helicase *(TWINKLE)","protein_coding"
"Seita.4G289000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G007100.1","No alias","Setaria italica ","endoribonuclease *(RNase Z) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Seita.5G012800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G017700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G022800.1","No alias","Setaria italica ","MAP-kinase protein phosphatase","protein_coding"
"Seita.5G051400.1","No alias","Setaria italica ","XRN4-exoribonuclease cofactor *(LARP1)","protein_coding"
"Seita.5G053500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G114600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G130900.1","No alias","Setaria italica ","GPI lipid remodeling hydrolase *(PGAP3)","protein_coding"
"Seita.5G131200.1","No alias","Setaria italica ","polynucleotide kinase involved in ITS2 rRNA removal *(GRC3)","protein_coding"
"Seita.5G151700.1","No alias","Setaria italica ","component *(CstF77/Rna14) of Cleavage Stimulatory Factor (CstF) complex","protein_coding"
"Seita.5G155700.1","No alias","Setaria italica ","substrate adaptor *(BchD/GFS12) of CUL4-based E3 ubiquitin ligase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G174400.1","No alias","Setaria italica ","regulatory protein *(CYCL) of cell cycle","protein_coding"
"Seita.5G205700.1","No alias","Setaria italica ","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G216700.1","No alias","Setaria italica ","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Seita.5G218500.1","No alias","Setaria italica ","regulatory factor *(MEM1) of ROS1-mediated DNA demethylation & regulatory protein *(ILP) of Programmed Cell Death","protein_coding"
"Seita.5G226900.1","No alias","Setaria italica ","regulatory protein of RNA homeostasis","protein_coding"
"Seita.5G241400.1","No alias","Setaria italica ","ssDNA-binding protein *(SSB)","protein_coding"
"Seita.5G256800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G270500.1","No alias","Setaria italica ","component *(NRPC13/RPC82) of TFIIIe transcription factor module","protein_coding"
"Seita.5G274300.1","No alias","Setaria italica ","DNA ligase *(LIG6) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Seita.5G279100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G294100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G295200.1","No alias","Setaria italica ","voltage-gated anion channel *(VDAC)","protein_coding"
"Seita.5G345900.1","No alias","Setaria italica ","component *(mS76) of small mitoribosomal-subunit proteome & component *(mS78/mS79) of small mitoribosomal-subunit proteome","protein_coding"
"Seita.5G347700.1","No alias","Setaria italica ","modification writer component *(RING1) of modification writer protein components","protein_coding"
"Seita.5G353700.1","No alias","Setaria italica ","dihydopyrimidine aminohydrolase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Seita.5G374000.1","No alias","Setaria italica ","helicase component *(RVB) & helicase component *(RVB) of chromatin remodeling complex","protein_coding"
"Seita.5G383700.1","No alias","Setaria italica ","steroid 5-alpha-reductase *(DET2) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Seita.5G421800.1","No alias","Setaria italica ","component *(DSP4) of DSP snRNA processing complex","protein_coding"
"Seita.5G424300.1","No alias","Setaria italica ","component *(SNAPC3/SRD2) of SNAP snRNA transcription factor complex","protein_coding"
"Seita.5G442400.1","No alias","Setaria italica ","LD-type transcription factor & flowering time factor *(LD) & regulatory protein of RNA homeostasis","protein_coding"
"Seita.5G450700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G465300.1","No alias","Setaria italica ","subunit alpha *(QCR2) of cytochrome c reductase subcomplex & subunit alpha of MPP mitochondrial signal peptidase heterodimer & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.5G467900.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.5G468700.1","No alias","Setaria italica ","telomeric dsDNA-binding protein","protein_coding"
"Seita.5G469900.1","No alias","Setaria italica ","component *(MON1/SAND) of MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex","protein_coding"
"Seita.6G013900.1","No alias","Setaria italica ","component *(AUG1) of Augmin gamma-TuRC recruiting complex","protein_coding"
"Seita.6G028700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G051300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G060400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G063200.1","No alias","Setaria italica ","tyrosine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Seita.6G092200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G118400.1","No alias","Setaria italica ","deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & component *(HDA6) of histone deacetylation complex & histone deacetylase *(HDA8)","protein_coding"
"Seita.6G132500.1","No alias","Setaria italica ","E3 ubiquitin ligase","protein_coding"
"Seita.6G221900.1","No alias","Setaria italica ","uridine/cytidine kinase & EC_2.4 glycosyltransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.6G225500.1","No alias","Setaria italica ","RNA editing factor *(MORF)","protein_coding"
"Seita.6G227200.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & glycine-tRNA ligase","protein_coding"
"Seita.6G247400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G027900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G033900.1","No alias","Setaria italica ","FRS/FRF-type transcription factor","protein_coding"
"Seita.7G034900.1","No alias","Setaria italica ","SIRTUIN-type histone deacetylase *(SRT)","protein_coding"
"Seita.7G037000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G075900.1","No alias","Setaria italica ","iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)","protein_coding"
"Seita.7G077600.1","No alias","Setaria italica ","component *(RBM26) of PAXT nucleoplasmic activation complex","protein_coding"
"Seita.7G080800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G089000.1","No alias","Setaria italica ","alkaline sucrose-specific invertase *(CIN)","protein_coding"
"Seita.7G100100.1","No alias","Setaria italica ","E3 ubiquitin protein ligase *(PUB32) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G101400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G126300.1","No alias","Setaria italica ","component of FtsH3/10 matrix-AAA protease heterodimer","protein_coding"
"Seita.7G187400.1","No alias","Setaria italica ","SSU processome assembly factor *(UTP10)","protein_coding"
"Seita.7G212400.1","No alias","Setaria italica ","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"Seita.7G229000.1","No alias","Setaria italica ","DNA ligase component *(LIG4) of LIG4-XRCC4 ligase complex & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Seita.7G254600.1","No alias","Setaria italica ","component *(MRE11) of MRE11-RAD50-NBS1 (MRN) complex & component *(MRE11) of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Seita.7G265100.1","No alias","Setaria italica ","phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.7G291600.1","No alias","Setaria italica ","pre-40S ribosomal subunit assembly factor *(UTP22)","protein_coding"
"Seita.7G295500.1","No alias","Setaria italica ","FRS/FRF-type transcription factor","protein_coding"
"Seita.7G298800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G009000.1","No alias","Setaria italica ","transposon-derived factor HDP1","protein_coding"
"Seita.8G022100.1","No alias","Setaria italica ","SSU processome assembly factor *(MPP10)","protein_coding"
"Seita.8G031800.1","No alias","Setaria italica ","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Seita.8G039500.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.8G080000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G081400.1","No alias","Setaria italica ","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(ASD)","protein_coding"
"Seita.8G091900.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.8G095000.1","No alias","Setaria italica ","RNA editing factor *(MORF)","protein_coding"
"Seita.8G136500.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.8G156800.1","No alias","Setaria italica ","tRNA cytidine acetyltransferase adaptor protein","protein_coding"
"Seita.8G174500.1","No alias","Setaria italica ","regulatory component *(LST8) of TORC complex","protein_coding"
"Seita.8G199100.1","No alias","Setaria italica ","monosaccharide transporter *(AZT)","protein_coding"
"Seita.8G208400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G223700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G236700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G250200.1","No alias","Setaria italica ","GRAS-type transcription factor","protein_coding"
"Seita.8G252800.1","No alias","Setaria italica ","component *(MED34) of MEDIATOR transcription co-activator complex","protein_coding"
"Seita.9G002000.1","No alias","Setaria italica ","component *(LUG/LUH) of transcriptional co-repressor complex","protein_coding"
"Seita.9G015200.1","No alias","Setaria italica ","poly(ADP-ribose) glycohydrolase *(PARG)","protein_coding"
"Seita.9G015600.1","No alias","Setaria italica ","cation channel *(DMI1) & calcium cation channel *(DMI1/Pollux/Castor)","protein_coding"
"Seita.9G017200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G031600.1","No alias","Setaria italica ","MRM2-type rRNA methyltransferase","protein_coding"
"Seita.9G038700.1","No alias","Setaria italica ","transcription factor *(CRF) & subgroup ERF-VI transcription factor","protein_coding"
"Seita.9G041200.1","No alias","Setaria italica ","component *(IES2) of INO80 chromatin remodeling complex","protein_coding"
"Seita.9G057500.1","No alias","Setaria italica ","exoribonuclease *(XRN4)","protein_coding"
"Seita.9G106400.1","No alias","Setaria italica ","P2A-type calcium cation-transporting ATPase *(ECA)","protein_coding"
"Seita.9G127500.1","No alias","Setaria italica ","ethylene signal transducer *(EIN2)","protein_coding"
"Seita.9G131600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G136900.1","No alias","Setaria italica ","component *(CABIN1) of HIRA chaperone complex","protein_coding"
"Seita.9G139300.1","No alias","Setaria italica ","regulatory component *(LST8) of TORC complex","protein_coding"
"Seita.9G178100.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & lysine-tRNA ligase","protein_coding"
"Seita.9G179200.1","No alias","Setaria italica ","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"Seita.9G189200.1","No alias","Setaria italica ","component *(ATG9) of autophagosome ATG9-2-18 membrane shuttling complex","protein_coding"
"Seita.9G189900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G194200.1","No alias","Setaria italica ","S28-class carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.9G197200.1","No alias","Setaria italica ","component *(U1-70K) of U1 snRNP complex","protein_coding"
"Seita.9G206500.1","No alias","Setaria italica ","component *(NRPA2) of RNA polymerase I complex","protein_coding"
"Seita.9G207300.1","No alias","Setaria italica ","regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex","protein_coding"
"Seita.9G207400.1","No alias","Setaria italica ","E3 ubiquitin ligase component *(HAKAI) of adenosine N6-methylation writer complex","protein_coding"
"Seita.9G212100.1","No alias","Setaria italica ","DNA ligase *(LIG1) & DNA replication DNA ligase *(LIG1) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Seita.9G231400.1","No alias","Setaria italica ","chaperone *(Hsp60)","protein_coding"
"Seita.9G243800.1","No alias","Setaria italica ","exoribonuclease *(RRP6L)","protein_coding"
"Seita.9G259500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G265600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G280000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G291800.1","No alias","Setaria italica ","monoacylglycerol lipase","protein_coding"
"Seita.9G305100.1","No alias","Setaria italica ","CDKE/CDK8 protein kinase & component *(CDK8) of kinase module of MEDIATOR transcription co-activator complex & catalytic component *(CDKE) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G338200.1","No alias","Setaria italica ","substrate adaptor *(ABD1)","protein_coding"
"Seita.9G354600.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & pyruvate orthophosphate dikinase","protein_coding"
"Seita.9G362600.1","No alias","Setaria italica ","mRNA endoribonuclease *(G3BP)","protein_coding"
"Seita.9G367100.1","No alias","Setaria italica ","E3 ubiquitin ligase *(HUB)","protein_coding"
"Seita.9G386200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G402900.1","No alias","Setaria italica ","regulatory GTPase (NUG2) of LSU processome","protein_coding"
"Seita.9G416500.1","No alias","Setaria italica ","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & hydrogen peroxide receptor kinase *(HPCA)","protein_coding"
"Seita.9G416900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G420200.1","No alias","Setaria italica ","channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Seita.9G422700.1","No alias","Setaria italica ","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(ASD)","protein_coding"
"Seita.9G426200.1","No alias","Setaria italica ","adenylosuccinate lyase *(PUR8)","protein_coding"
"Seita.9G447500.1","No alias","Setaria italica ","component *(DSP3) of DSP snRNA processing complex & regulatory protein *(SIEL) of plasmodesmata intercellular trafficking","protein_coding"
"Seita.9G447800.1","No alias","Setaria italica ","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G454600.1","No alias","Setaria italica ","nucleocytoplasmic import karyopherin *(IMB4)","protein_coding"
"Seita.9G477400.1","No alias","Setaria italica ","anion transporter *(NRT1/PTR)","protein_coding"
"Seita.9G490000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G491300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G500400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G540800.1","No alias","Setaria italica ","putative silicon efflux transporter *(LSI2)","protein_coding"
"Seita.9G546400.1","No alias","Setaria italica ","anion transporter *(NRT1/PTR)","protein_coding"
"Seita.9G563300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G570700.1","No alias","Setaria italica ","component *(TRM734) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex","protein_coding"
"Seita.9G579800.1","No alias","Setaria italica ","tRNA guanine-methyltransferase *(TRM3)","protein_coding"
"Seita.9G579900.1","No alias","Setaria italica ","component *(XPF) of DNA repair endonuclease complex & component *(MED19) of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Sobic.001G005800.1","No alias","Sorghum bicolor ","component *(KU80) of Ku70-Ku80 helicase complex","protein_coding"
"Sobic.001G010800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G013300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G015500.1","No alias","Sorghum bicolor ","component *(ALB3) of thylakoid membrane SRP insertion system","protein_coding"
"Sobic.001G026400.1","No alias","Sorghum bicolor ","tRNA adenosine-methyltransferase *(TRM13)","protein_coding"
"Sobic.001G032400.1","No alias","Sorghum bicolor ","L-lectin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G043400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G050600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G081700.1","No alias","Sorghum bicolor ","component *(SWIB) of SWI-B chromatin-remodeling complexes","protein_coding"
"Sobic.001G085000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G087100.1","No alias","Sorghum bicolor ","phytochrome photoreceptor *(PHY)","protein_coding"
"Sobic.001G089600.1","No alias","Sorghum bicolor ","group-I intron splicing RNA helicase *(ABO6)","protein_coding"
"Sobic.001G090200.1","No alias","Sorghum bicolor ","assembly factor NDF5 involved in NDH complex assembly","protein_coding"
"Sobic.001G090300.1","No alias","Sorghum bicolor ","RNA helicase (MAA3) involved in gametogenesis","protein_coding"
"Sobic.001G090800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G094200.1","No alias","Sorghum bicolor ","assembly factor PSA3 involved in PS-I assembly","protein_coding"
"Sobic.001G114400.1","No alias","Sorghum bicolor ","formylglycinamidine RN synthase *(PUR4) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G120500.1","No alias","Sorghum bicolor ","component *(Toc64-III) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G172300.1","No alias","Sorghum bicolor ","component *(FLN2) of plastid-encoded RNA polymerase","protein_coding"
"Sobic.001G178300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G179100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G196700.1","No alias","Sorghum bicolor ","S28-class carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.001G199500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G202400.1","No alias","Sorghum bicolor ","Cyt-P450 hydroxylase scaffold protein *(MSBP)","protein_coding"
"Sobic.001G211500.1","No alias","Sorghum bicolor ","DNA ligase *(LIG1) & DNA replication DNA ligase *(LIG1) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Sobic.001G219700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G246500.1","No alias","Sorghum bicolor ","ribosome biogenesis GTPase *(SIN2)","protein_coding"
"Sobic.001G248300.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.001G248900.1","No alias","Sorghum bicolor ","component *(SEC15) of Exocyst complex","protein_coding"
"Sobic.001G261585.1","No alias","Sorghum bicolor ","modification reader component *(LHP1) of PRC1 histone mono-ubiquitination complex","protein_coding"
"Sobic.001G305700.1","No alias","Sorghum bicolor ","cofactor of plastid-encoded RNA polymerase *(PAP11/MURE) & catalytic protein *(MurE) of UDP-N-acetylmuramic acid pentapeptide formation","protein_coding"
"Sobic.001G308500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G316100.1","No alias","Sorghum bicolor ","protein involved in PS-II assembly *(PAM68)","protein_coding"
"Sobic.001G326300.1","No alias","Sorghum bicolor ","regulatory factor *(DG1) of plastid-encoded RNA polymerase activity","protein_coding"
"Sobic.001G337600.1","No alias","Sorghum bicolor ","protein involved in cytochrome b6/f complex assembly *(HCF222)","protein_coding"
"Sobic.001G367100.1","No alias","Sorghum bicolor ","ROP-activating protein *(RenGAP)","protein_coding"
"Sobic.001G373000.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP93)","protein_coding"
"Sobic.001G385400.1","No alias","Sorghum bicolor ","RopGEF guanine nucleotide exchange factor *(SPIKE)","protein_coding"
"Sobic.001G401700.1","No alias","Sorghum bicolor ","LL-diaminopimelate aminotransferase","protein_coding"
"Sobic.001G408600.1","No alias","Sorghum bicolor ","RNA pseudouridine synthase *(PUS5)","protein_coding"
"Sobic.001G425700.1","No alias","Sorghum bicolor ","LRR-XIIIa protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G432300.1","No alias","Sorghum bicolor ","imidazoleglycerol-phosphate synthase","protein_coding"
"Sobic.001G441200.1","No alias","Sorghum bicolor ","component *(Toc33/Toc34) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G478000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G485600.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.001G485800.1","No alias","Sorghum bicolor ","omega-amidase","protein_coding"
"Sobic.001G502600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G504200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G522000.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.001G523700.3","No alias","Sorghum bicolor ","regulatory protein *(AN) of mRNA stress granule formation","protein_coding"
"Sobic.001G523800.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & anthranilate phosphoribosyltransferase","protein_coding"
"Sobic.001G535500.2","No alias","Sorghum bicolor ","folyl-polyglutamate synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G536000.1","No alias","Sorghum bicolor ","component *(ARP4) shared with NuA4/SWR1 complexes & component *(ARP4) of SWR1 chromatin remodeling complex","protein_coding"
"Sobic.001G539016.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G539400.1","No alias","Sorghum bicolor ","P3A-type proton-translocating ATPase *(AHA)","protein_coding"
"Sobic.001G543900.1","No alias","Sorghum bicolor ","P3A-type proton-translocating ATPase *(AHA)","protein_coding"
"Sobic.001G544300.1","No alias","Sorghum bicolor ","tRNA guanine-methyltransferase *(TRM3)","protein_coding"
"Sobic.002G003300.1","No alias","Sorghum bicolor ","component *(KU70) of Ku70-Ku80 helicase complex","protein_coding"
"Sobic.002G006401.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G009200.1","No alias","Sorghum bicolor ","regulatory protein DRL1 of ELONGATOR transcription elongation complex","protein_coding"
"Sobic.002G017900.1","No alias","Sorghum bicolor ","histone chaperone *(NASP)","protein_coding"
"Sobic.002G033300.1","No alias","Sorghum bicolor ","regulatory protein *(WAP) of SUN-WIP cytoskeleton-nucleoskeleton-linker complex","protein_coding"
"Sobic.002G043000.1","No alias","Sorghum bicolor ","miRNA/siRNA methyltransferase *(HEN1)","protein_coding"
"Sobic.002G051600.1","No alias","Sorghum bicolor ","assembly factor MMS19 of cytosolic CIA system transfer phase","protein_coding"
"Sobic.002G052400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G054700.1","No alias","Sorghum bicolor ","subunit alpha of tryptophan synthase complex","protein_coding"
"Sobic.002G062500.1","No alias","Sorghum bicolor ","methylmalonate-semialdehyde dehydrogenase *(MMSD) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.002G076000.1","No alias","Sorghum bicolor ","UMF15-type solute transporter","protein_coding"
"Sobic.002G090400.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.002G101000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G111700.6","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G151000.1","No alias","Sorghum bicolor ","enoyl-ACP reductase","protein_coding"
"Sobic.002G154400.1","No alias","Sorghum bicolor ","component *(SMC6) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.002G155100.1","No alias","Sorghum bicolor ","bifunctional homoserine dehydrogenase and aspartate kinase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.002G156200.1","No alias","Sorghum bicolor ","regulatory protein *(NPQ7) of non-photochemical quenching","protein_coding"
"Sobic.002G181000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G190800.1","No alias","Sorghum bicolor ","regulatory factor *(PRIN2) of plastid-encoded RNA polymerase activity","protein_coding"
"Sobic.002G199100.1","No alias","Sorghum bicolor ","Parvulin-type protein folding catalyst *(PIN)","protein_coding"
"Sobic.002G226900.1","No alias","Sorghum bicolor ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.002G243650.1","No alias","Sorghum bicolor ","endoribonuclease *(RNase Z)","protein_coding"
"Sobic.002G254800.1","No alias","Sorghum bicolor ","type-1A topoisomerase TOP3b & topoisomerase component *(TOP3b) of TDRD3-TOP3B methyl-arginine reader complex","protein_coding"
"Sobic.002G266300.1","No alias","Sorghum bicolor ","myo-inositol polyphosphate kinase *(ITPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G284200.1","No alias","Sorghum bicolor ","monofunctional enoyl-CoA hydratase","protein_coding"
"Sobic.002G314400.1","No alias","Sorghum bicolor ","methionyl aminopeptidase *(MAP1) & methionyl aminopeptidase *(MAP1) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.002G317600.1","No alias","Sorghum bicolor ","threonine reactive imine intermediate deaminase *(RidA)","protein_coding"
"Sobic.002G320500.1","No alias","Sorghum bicolor ","MYB-RELATED transcription factor *(DRMY)","protein_coding"
"Sobic.002G354800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G363500.2","No alias","Sorghum bicolor ","TrmH-type tRNA methyltransferase","protein_coding"
"Sobic.002G380400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G396000.1","No alias","Sorghum bicolor ","component *(SYF1/MAC9)  of MAC spliceosome-associated complex","protein_coding"
"Sobic.002G409900.1","No alias","Sorghum bicolor ","regulatory GTPase (OBGL) of thylakoid biogenesis","protein_coding"
"Sobic.002G422100.4","No alias","Sorghum bicolor ","nucleoporin of nuclear pore complex *(NUP214) & regulatory protein *(LNO1) of mRNA export","protein_coding"
"Sobic.002G423500.1","No alias","Sorghum bicolor ","subunit zeta *(CCT6) of CCT chaperonin folding complex","protein_coding"
"Sobic.002G426400.1","No alias","Sorghum bicolor ","LON-type protease","protein_coding"
"Sobic.002G428700.1","No alias","Sorghum bicolor ","RDR2-polymerase accessory protein *(CLSY1/2)","protein_coding"
"Sobic.002G430300.1","No alias","Sorghum bicolor ","component *(Symplekin/Pta1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Sobic.003G014300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G028600.2","No alias","Sorghum bicolor ","aminoimidazole RN carboxylase *(PUR6)","protein_coding"
"Sobic.003G039300.1","No alias","Sorghum bicolor ","23S-rRNA maturation helicase *(RH39)","protein_coding"
"Sobic.003G072500.1","No alias","Sorghum bicolor ","regulatory protein of DNA methylation pathway *(IDN/IDP)","protein_coding"
"Sobic.003G075100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G100800.1","No alias","Sorghum bicolor ","acetyl-CoA C-acyltransferase & EC_2.3 acyltransferase","protein_coding"
"Sobic.003G127300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G152400.1","No alias","Sorghum bicolor ","substrate adaptor *(BchD/GFS12) of CUL4-based E3 ubiquitin ligase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G162800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G179000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G189600.1","No alias","Sorghum bicolor ","PQQL-like peptidase","protein_coding"
"Sobic.003G194600.1","No alias","Sorghum bicolor ","C2H2 subclass IDD transcription factor","protein_coding"
"Sobic.003G202100.1","No alias","Sorghum bicolor ","assembly factor of NADH dehydrogenase complex *(NDUFAF7)","protein_coding"
"Sobic.003G206800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G252100.1","No alias","Sorghum bicolor ","component *(RINGLET/RLT) of ISWI chromatin remodeling complex","protein_coding"
"Sobic.003G260400.1","No alias","Sorghum bicolor ","DNA ligase *(LIG6) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Sobic.003G287100.1","No alias","Sorghum bicolor ","component *(TAH18) of cytosolic CIA system assembly phase","protein_coding"
"Sobic.003G291300.1","No alias","Sorghum bicolor ","MRM1-type rRNA methyltransferase","protein_coding"
"Sobic.003G307900.1","No alias","Sorghum bicolor ","transcription factor","protein_coding"
"Sobic.003G309500.1","No alias","Sorghum bicolor ","transcriptional coactivator *(HEMERA) & cofactor of plastid-encoded RNA polymerase *(PAP5/TAC12)","protein_coding"
"Sobic.003G310100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G310900.1","No alias","Sorghum bicolor ","deubiquitinase *(UBP12-13) & deubiquitinase *(UBP12-13)","protein_coding"
"Sobic.003G313500.1","No alias","Sorghum bicolor ","endomembrane trafficking ATG6-stability regulator protein *(TRAF1)","protein_coding"
"Sobic.003G329400.2","No alias","Sorghum bicolor ","dihydopyrimidine aminohydrolase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Sobic.003G345900.1","No alias","Sorghum bicolor ","class-II histone deacetylase","protein_coding"
"Sobic.003G353600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G360300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G384800.3","No alias","Sorghum bicolor ","pectin acetylesterase *(PAE)","protein_coding"
"Sobic.003G427100.1","No alias","Sorghum bicolor ","component *(Pfs2/FY) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & cleavage and polyadenylation specificity factor *(FY)","protein_coding"
"Sobic.003G428400.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G433300.1","No alias","Sorghum bicolor ","component *(MLH1) of MutLy endonuclease heterodimer & component *(MLH1) of MLH1-PMS1 heterodimer","protein_coding"
"Sobic.003G441200.1","No alias","Sorghum bicolor ","M18-class aspartyl aminopeptidase *(DAP) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.004G000500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G018100.1","No alias","Sorghum bicolor ","glutamate-tRNA ligase & glutamyl-tRNA synthetase *(GluRS) & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Sobic.004G031300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G031400.1","No alias","Sorghum bicolor ","RKF3 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G035000.1","No alias","Sorghum bicolor ","RsmH-type rRNA methyltransferase *(CMAL)","protein_coding"
"Sobic.004G036800.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.004G037900.2","No alias","Sorghum bicolor ","L-arabinose kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G038100.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Sobic.004G043750.1","No alias","Sorghum bicolor ","component *(NRPE1) of RNA polymerase V complex","protein_coding"
"Sobic.004G047500.1","No alias","Sorghum bicolor ","recombination mediator *(Whirly)","protein_coding"
"Sobic.004G048800.1","No alias","Sorghum bicolor ","RNA helicase component *(SKI2) of SUPERKILLER regulation complex","protein_coding"
"Sobic.004G050300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G064600.1","No alias","Sorghum bicolor ","ubiquitin-proteasome shuttle factor *(RAD23)","protein_coding"
"Sobic.004G078500.1","No alias","Sorghum bicolor ","LRR-V protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G097900.1","No alias","Sorghum bicolor ","mitochondrial RNA splicing factor *(ABO5)","protein_coding"
"Sobic.004G098000.2","No alias","Sorghum bicolor ","endoribonuclease *(YbeY)","protein_coding"
"Sobic.004G106400.2","No alias","Sorghum bicolor ","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G123300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G151000.1","No alias","Sorghum bicolor ","component *(RAD50) of MRE11-RAD50-NBS1 (MRN) complex & component *(RAD50) of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Sobic.004G208301.1","No alias","Sorghum bicolor ","tRNA guanine-methyltransferase *(TRM5)","protein_coding"
"Sobic.004G249600.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.004G252100.1","No alias","Sorghum bicolor ","core component *(NHP2) of H/ACA snoRNP RNA pseudouridylation complex","protein_coding"
"Sobic.004G261500.1","No alias","Sorghum bicolor ","ribose-phosphate diphosphokinase","protein_coding"
"Sobic.004G263600.2","No alias","Sorghum bicolor ","DNA translocase *(RecG)","protein_coding"
"Sobic.004G266900.1","No alias","Sorghum bicolor ","regulatory protein *(SBA) of mitochondrial nucleoid organization","protein_coding"
"Sobic.004G314500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G315500.1","No alias","Sorghum bicolor ","component *(RFC5) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.004G319400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G327500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G345600.1","No alias","Sorghum bicolor ","transcriptional repressor *(IAA/AUX)","protein_coding"
"Sobic.004G352600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G353300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G357800.4","No alias","Sorghum bicolor ","phospholipase-A2 *(sPLA2))","protein_coding"
"Sobic.005G009300.1","No alias","Sorghum bicolor ","cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)","protein_coding"
"Sobic.005G014600.1","No alias","Sorghum bicolor ","endo-beta-1,4-mannanase","protein_coding"
"Sobic.005G028600.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase component *(LTN1) of Ribosome-associated Quality Control (RQC) complex","protein_coding"
"Sobic.005G045700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G059200.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G064100.2","No alias","Sorghum bicolor ","cellulose synthase CSC-interactive protein *(CSI)","protein_coding"
"Sobic.005G064700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G084300.1","No alias","Sorghum bicolor ","2S globulin seed storage protein","protein_coding"
"Sobic.005G087900.5","No alias","Sorghum bicolor ","EC_3.2 glycosylase & glucosylceramidase *(GCD)","protein_coding"
"Sobic.005G088900.4","No alias","Sorghum bicolor ","component *(NOT11) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Sobic.005G098800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G160100.1","No alias","Sorghum bicolor ","component *(RFC1) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.005G172500.1","No alias","Sorghum bicolor ","regulatory component *(LST8) of TORC complex","protein_coding"
"Sobic.005G187300.1","No alias","Sorghum bicolor ","phosphatidic acid phosphatase","protein_coding"
"Sobic.005G200800.1","No alias","Sorghum bicolor ","NDX-type transcription factor","protein_coding"
"Sobic.005G232100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G010400.1","No alias","Sorghum bicolor ","tRNA dihydrouridine synthase","protein_coding"
"Sobic.006G025000.2","No alias","Sorghum bicolor ","TCP-type transcription factor","protein_coding"
"Sobic.006G033101.1","No alias","Sorghum bicolor ","component *(CPSF160/Yhh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Sobic.006G047900.1","No alias","Sorghum bicolor ","dynamin-like protein *(DRP3)","protein_coding"
"Sobic.006G049600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G053200.2","No alias","Sorghum bicolor ","iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)","protein_coding"
"Sobic.006G056600.1","No alias","Sorghum bicolor ","component *(uL4m) of large mitoribosomal-subunit proteome","protein_coding"
"Sobic.006G058800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & glycine-tRNA ligase","protein_coding"
"Sobic.006G059500.1","No alias","Sorghum bicolor ","scaffold factor *(COILIN) of Cajal body formation","protein_coding"
"Sobic.006G061100.1","No alias","Sorghum bicolor ","regulatory subunit betagamma of SNF1-related SnRK1 kinase complex & regulatory subunit betagamma of SnRK1 kinase complex","protein_coding"
"Sobic.006G083300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G083400.1","No alias","Sorghum bicolor ","protein disulfide isomerase *(PDI-B)","protein_coding"
"Sobic.006G085601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G110200.2","No alias","Sorghum bicolor ","plastidial RNA splicing factor *(CFM2)","protein_coding"
"Sobic.006G122100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G137700.1","No alias","Sorghum bicolor ","component *(GCP2) of gamma-Tubulin ring complex","protein_coding"
"Sobic.006G140400.1","No alias","Sorghum bicolor ","regulatory protein *(MSH1) of genome stability maintenance","protein_coding"
"Sobic.006G141600.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.006G157000.2","No alias","Sorghum bicolor ","adenylosuccinate lyase *(PUR8)","protein_coding"
"Sobic.006G166500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G179000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G181800.2","No alias","Sorghum bicolor ","component *(GCP6) of gamma-Tubulin ring complex","protein_coding"
"Sobic.006G184900.1","No alias","Sorghum bicolor ","component *(VIP6/CTR9) of PAF1C transcription initiation and elongation complex","protein_coding"
"Sobic.006G196000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G198400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G204100.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.006G207300.1","No alias","Sorghum bicolor ","DNA ligase component *(LIG4) of LIG4-XRCC4 ligase complex & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Sobic.006G212000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G217000.1","No alias","Sorghum bicolor ","imidazoleglycerol-phosphate dehydratase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.006G224800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G225400.1","No alias","Sorghum bicolor ","histone methyltransferase *(ATXR2)","protein_coding"
"Sobic.006G228700.1","No alias","Sorghum bicolor ","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G231800.2","No alias","Sorghum bicolor ","component *(MRE11) of MRE11-RAD50-NBS1 (MRN) complex & component *(MRE11) of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Sobic.006G234700.1","No alias","Sorghum bicolor ","ribitol kinase","protein_coding"
"Sobic.006G243400.1","No alias","Sorghum bicolor ","phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.006G250100.1","No alias","Sorghum bicolor ","tRNA adenosine deaminase *(TAD1)","protein_coding"
"Sobic.006G261100.1","No alias","Sorghum bicolor ","cargo receptor protein *(PUX7/8/9/13)","protein_coding"
"Sobic.006G266700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G027000.1","No alias","Sorghum bicolor ","regulatory factor *(RP8) of RNA polymerase RpoA activity","protein_coding"
"Sobic.007G029200.1","No alias","Sorghum bicolor ","regulatory protein *(WAP) of SUN-WIP cytoskeleton-nucleoskeleton-linker complex","protein_coding"
"Sobic.007G068100.1","No alias","Sorghum bicolor ","aconitase *(ACO) & aconitase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.007G076700.1","No alias","Sorghum bicolor ","oxygen-dependent coproporphyrinogen III oxidase *(HEMF) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.007G086500.2","No alias","Sorghum bicolor ","component *(AUG1) of Augmin gamma-TuRC recruiting complex","protein_coding"
"Sobic.007G092200.1","No alias","Sorghum bicolor ","aspartate transcarbamoylase *(ATC)","protein_coding"
"Sobic.007G108100.1","No alias","Sorghum bicolor ","Hsp90-co-chaperone *(P23)","protein_coding"
"Sobic.007G114000.1","No alias","Sorghum bicolor ","deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & component *(HDA6) of histone deacetylation complex & histone deacetylase *(HDA8)","protein_coding"
"Sobic.007G165600.1","No alias","Sorghum bicolor ","broad substrate-specificity aminopeptidase *(MPA1)","protein_coding"
"Sobic.007G168300.1","No alias","Sorghum bicolor ","O-fucosyltransferase *(SPY)","protein_coding"
"Sobic.007G171950.1","No alias","Sorghum bicolor ","protein-L-isoaspartate methyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.007G188200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G193700.1","No alias","Sorghum bicolor ","threonylcarbamoyl-AMP synthase","protein_coding"
"Sobic.007G193900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G200900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G202800.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.007G225700.1","No alias","Sorghum bicolor ","3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Sobic.008G017200.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(ALADIN)","protein_coding"
"Sobic.008G058000.1","No alias","Sorghum bicolor ","plastid division dynamin-like protein *(ARC5)","protein_coding"
"Sobic.008G062000.1","No alias","Sorghum bicolor ","proteasome assembly chaperone PAC4","protein_coding"
"Sobic.008G085700.1","No alias","Sorghum bicolor ","component *(SEC10) of Exocyst complex","protein_coding"
"Sobic.008G090000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G097000.1","No alias","Sorghum bicolor ","L-galactose dehydrogenase *(GalDH)","protein_coding"
"Sobic.008G098600.2","No alias","Sorghum bicolor ","component *(NRPC4) of RNA polymerase III complex","protein_coding"
"Sobic.008G111600.1","No alias","Sorghum bicolor ","chaperone *(Hsp90)","protein_coding"
"Sobic.008G130900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G140700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G147000.1","No alias","Sorghum bicolor ","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.008G156300.1","No alias","Sorghum bicolor ","pyridoxal kinase *(SNO1/SOS4) & pyridoxal kinase *(SOS4/SNO1) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.008G160700.1","No alias","Sorghum bicolor ","EC_6.4 ligase forming carbon-carbon bond & subunit alpha of methylcrotonoyl-CoA carboxylase complex","protein_coding"
"Sobic.008G166300.1","No alias","Sorghum bicolor ","storage vacuole protein sorting receptor *(RMR)","protein_coding"
"Sobic.009G036300.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.009G092900.1","No alias","Sorghum bicolor ","tRNA guanine-methyltransferase *(TRM1) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.009G096100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G105400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G118900.1","No alias","Sorghum bicolor ","regulatory protein *(PATROL1) involved in cellulose synthase trafficking","protein_coding"
"Sobic.009G137000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G141400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G158100.1","No alias","Sorghum bicolor ","ribosome docking factor *(MDM38)","protein_coding"
"Sobic.009G163600.1","No alias","Sorghum bicolor ","component *(RRP41) of exosome EXO9 core complex","protein_coding"
"Sobic.009G173600.1","No alias","Sorghum bicolor ","LSU ribosomal large subunit export factor *(MDN1)","protein_coding"
"Sobic.009G193700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G213100.1","No alias","Sorghum bicolor ","beta-galactosidase *(BGAL17) & EC_3.2 glycosylase","protein_coding"
"Sobic.009G214200.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.009G223200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G235900.1","No alias","Sorghum bicolor ","monosaccharide transporter *(ERD6)","protein_coding"
"Sobic.009G241200.3","No alias","Sorghum bicolor ","RNA editing factor *(ECB2/VAC1)","protein_coding"
"Sobic.009G253400.1","No alias","Sorghum bicolor ","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Sobic.009G255600.1","No alias","Sorghum bicolor ","core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes & core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes","protein_coding"
"Sobic.009G260700.1","No alias","Sorghum bicolor ","guanine nucleotide dissociation inhibitor *(RopGDI)","protein_coding"
"Sobic.010G027200.1","No alias","Sorghum bicolor ","proteolytic component *(ClpP2) of mitochondrion Clp-type protease complex","protein_coding"
"Sobic.010G032900.1","No alias","Sorghum bicolor ","1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2 transferase transferring aldehyde or ketonic group","protein_coding"
"Sobic.010G039100.3","No alias","Sorghum bicolor ","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Sobic.010G041400.1","No alias","Sorghum bicolor ","ATP-dependent phosphofructokinase","protein_coding"
"Sobic.010G051500.1","No alias","Sorghum bicolor ","catalytic component of PP1 phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.010G051700.1","No alias","Sorghum bicolor ","type-Ia DNA topoisomerase","protein_coding"
"Sobic.010G056100.1","No alias","Sorghum bicolor ","endonuclease *(FAN1)","protein_coding"
"Sobic.010G077600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G097500.1","No alias","Sorghum bicolor ","DNA polymerase lambda *(POLL)","protein_coding"
"Sobic.010G098200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G112300.1","No alias","Sorghum bicolor ","anion channel *(QUAC/ALMT)","protein_coding"
"Sobic.010G114900.1","No alias","Sorghum bicolor ","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"Sobic.010G136200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G157700.1","No alias","Sorghum bicolor ","regulatory factor *(RP8) of RNA polymerase RpoA activity","protein_coding"
"Sobic.010G206300.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & isoleucine-tRNA ligase","protein_coding"
"Sobic.010G224700.1","No alias","Sorghum bicolor ","DNA primase and helicase *(TWINKLE)","protein_coding"
"Sobic.010G277300.1","No alias","Sorghum bicolor ","sterol delta24 reductase","protein_coding"
"Solyc01g008060","No alias","Solanum lycopersicum","RNase H family protein (AHRD V3.3 *** AT1G24090.1)","protein_coding"
"Solyc01g009070","No alias","Solanum lycopersicum","gamyb-like 1","protein_coding"
"Solyc01g009630","No alias","Solanum lycopersicum","Cleavage and polyadenylation specificity factor subunit 5 (AHRD V3.3 *** A0A0K9P6H8_ZOSMR)","protein_coding"
"Solyc01g020440","No alias","Solanum lycopersicum","Replication factor C subunit 3 (AHRD V3.3 *** RFC3_ARATH)","protein_coding"
"Solyc01g028930","No alias","Solanum lycopersicum","TATA-box-binding protein (AHRD V3.3 *** TBP_SOLTU)","protein_coding"
"Solyc01g060410","No alias","Solanum lycopersicum","cation calcium exchanger 4 (AHRD V3.3 --* AT1G54115.1)","protein_coding"
"Solyc01g067490","No alias","Solanum lycopersicum","Anaphase-promoting complex subunit 7-like protein (AHRD V3.3 *** A0A0B0MSH3_GOSAR)","protein_coding"
"Solyc01g067600","No alias","Solanum lycopersicum","Zinc finger, CW-type (AHRD V3.3 *** A0A103XJ19_CYNCS)","protein_coding"
"Solyc01g068360","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR)","protein_coding"
"Solyc01g079600","No alias","Solanum lycopersicum","Lipase (AHRD V3.3 *** A0A151RYE9_CAJCA)","protein_coding"
"Solyc01g081030","No alias","Solanum lycopersicum","SCAI-like protein (AHRD V3.3 *** A0A0M4KE35_SOLTU)","protein_coding"
"Solyc01g087200","No alias","Solanum lycopersicum","Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS)","protein_coding"
"Solyc01g087250","No alias","Solanum lycopersicum","carotenoid cleavage dioxygenase 1A","protein_coding"
"Solyc01g088470","No alias","Solanum lycopersicum","50S ribosomal protein L18 (AHRD V3.3 *** A0A151SFZ6_CAJCA)","protein_coding"
"Solyc01g097500","No alias","Solanum lycopersicum","LSTK-1-like kinase","protein_coding"
"Solyc01g098920","No alias","Solanum lycopersicum","Mitochondrial Rho GTPase (AHRD V3.3 *** K4B0S9_SOLLC)","protein_coding"
"Solyc01g100330","No alias","Solanum lycopersicum","Zinc finger matrin-type 2 (AHRD V3.3 *** A0A0B0MXS7_GOSAR)","protein_coding"
"Solyc01g100340","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JRX1_CYNCS)","protein_coding"
"Solyc01g103570","No alias","Solanum lycopersicum","Bromodomain-containing factor 2 (AHRD V3.3 *** W9QKA6_9ROSA)","protein_coding"
"Solyc01g106030","No alias","Solanum lycopersicum","GATA transcription factor, putative (AHRD V3.3 *** B9S9L8_RICCO)","protein_coding"
"Solyc01g107260","No alias","Solanum lycopersicum","myosin-2 heavy chain-like protein (AHRD V3.3 *** AT1G49870.1)","protein_coding"
"Solyc01g109590","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7MF07_ARALL)","protein_coding"
"Solyc01g111450","No alias","Solanum lycopersicum","LEY14339 proteasome, alpha subunit","protein_coding"
"Solyc02g005350","No alias","Solanum lycopersicum","succinyl-CoA ligase alpha 2 subunit","protein_coding"
"Solyc02g021360","No alias","Solanum lycopersicum","Katanin p80 WD40 repeat-containing subunit B1 homolog (AHRD V3.3 *** K4B4Y6_SOLLC)","protein_coding"
"Solyc02g022900","No alias","Solanum lycopersicum","fatty acid hydroxylase 2 (AHRD V3.3 --* AT4G20870.2)","protein_coding"
"Solyc02g043860","No alias","Solanum lycopersicum","Insulin-degrading enzyme (AHRD V3.3 *** W9RZP1_9ROSA)","protein_coding"
"Solyc02g055520","No alias","Solanum lycopersicum","AT hook motif-containing protein, putative (AHRD V3.3 *-* Q2R0W4_ORYSJ)","protein_coding"
"Solyc02g061940","No alias","Solanum lycopersicum","Myb/SANT-like DNA-binding domain protein (AHRD V3.3 *** G7JXJ8_MEDTR)","protein_coding"
"Solyc02g068590","No alias","Solanum lycopersicum","Potassium transporter (AHRD V3.3 *** M1AP28_SOLTU)","protein_coding"
"Solyc02g068930","No alias","Solanum lycopersicum","Cytochrome c6 (AHRD V3.3 *** D7MKY9_ARALL)","protein_coding"
"Solyc02g069580","No alias","Solanum lycopersicum","UDP-glucose 4-epimerase, putative (AHRD V3.3 *** B9SV82_RICCO)","protein_coding"
"Solyc02g069830","No alias","Solanum lycopersicum","Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI)","protein_coding"
"Solyc02g078520","No alias","Solanum lycopersicum","Mediator of RNA polymerase II transcription subunit 16-like protein (AHRD V3.3 *** A0A0U3CDG5_REHGL)","protein_coding"
"Solyc02g078970","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G10580.1)","protein_coding"
"Solyc02g080590","No alias","Solanum lycopersicum","Autophagy-related protein (AHRD V3.3 *** A0A0V0GZQ3_SOLCH)","protein_coding"
"Solyc02g081520","No alias","Solanum lycopersicum","Nijmegen breakage syndrome 1, putative isoform 1 (AHRD V3.3 *** A0A061EEL2_THECC)","protein_coding"
"Solyc02g081960","No alias","Solanum lycopersicum","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein (AHRD V3.3 *** AT1G14650.3)","protein_coding"
"Solyc02g082460","No alias","Solanum lycopersicum","DIS3-like exonuclease 2 (AHRD V3.3 *-* A0A1D1YDW5_9ARAE)","protein_coding"
"Solyc02g083560","No alias","Solanum lycopersicum","Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** K4BAM4_SOLLC)","protein_coding"
"Solyc02g083710","No alias","Solanum lycopersicum","26S proteasome non-ATPase regulatory subunit 4 (AHRD V3.3 *** A0A0B2PG91_GLYSO)","protein_coding"
"Solyc02g091120","No alias","Solanum lycopersicum","DNA ligase (AHRD V3.3 *** K4BCR1_SOLLC)","protein_coding"
"Solyc02g094360","No alias","Solanum lycopersicum","Regulation of nuclear pre-mRNA domain-containing 1B (AHRD V3.3 *** A0A0B0P6N1_GOSAR)","protein_coding"
"Solyc03g006420","No alias","Solanum lycopersicum","Origin recognition complex subunit 1 (AHRD V3.3 *** A0A0B2RND7_GLYSO)","protein_coding"
"Solyc03g019730","No alias","Solanum lycopersicum","Ubiquitin activating enzyme (AHRD V3.3 *** O82692_SOLLC)","protein_coding"
"Solyc03g025690","No alias","Solanum lycopersicum","Chaperone protein DnaJ (AHRD V3.3 *** A0A1D1YJ37_9ARAE)","protein_coding"
"Solyc03g025980","No alias","Solanum lycopersicum","Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** A0A0K9NN67_ZOSMR)","protein_coding"
"Solyc03g031560","No alias","Solanum lycopersicum","Trimeric LpxA-like enzymes superfamily protein, putative isoform 3 (AHRD V3.3 *** A0A061GGP4_THECC)","protein_coding"
"Solyc03g032100","No alias","Solanum lycopersicum","Phosphoenolpyruvate carboxylase 1 (AHRD V3.3 --* CAPP1_MAIZE)","protein_coding"
"Solyc03g082490","No alias","Solanum lycopersicum","Reticulocyte-binding 2 a (AHRD V3.3 *** A0A0B0N4X3_GOSAR)","protein_coding"
"Solyc03g083430","No alias","Solanum lycopersicum","Splicing factor 3A subunit 3 (AHRD V3.3 *** W9RDU1_9ROSA)","protein_coding"
"Solyc03g083900","No alias","Solanum lycopersicum","Monocopper oxidase-like protein SKU5 (AHRD V3.3 *** SKU5_ARATH)","protein_coding"
"Solyc03g096920","No alias","Solanum lycopersicum","Exportin-1 (AHRD V3.3 *** D1MAF2_SOLLC)","protein_coding"
"Solyc03g097430","No alias","Solanum lycopersicum","LOW QUALITY:Transmembrane protein, putative (AHRD V3.3 *** A0A072TUA2_MEDTR)","protein_coding"
"Solyc03g097450","No alias","Solanum lycopersicum","SWI/SNF complex subunit SWI3A (AHRD V3.3 *** W9QCB3_9ROSA)","protein_coding"
"Solyc03g112350","No alias","Solanum lycopersicum","RNA helicase DEAD12","protein_coding"
"Solyc03g112660","No alias","Solanum lycopersicum","Protein MODIFIER OF SNC1 1 (AHRD V3.3 *** A0A0B2QEH1_GLYSO)","protein_coding"
"Solyc03g115110","No alias","Solanum lycopersicum","ATP synthase subunit gamma (AHRD V3.3 *** A0A061FYD0_THECC)","protein_coding"
"Solyc03g115670","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g116330","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT1G74530.3)","protein_coding"
"Solyc03g117040","No alias","Solanum lycopersicum","XH/XS domain-containing protein (AHRD V3.3 *** A0A061GG53_THECC)","protein_coding"
"Solyc03g117520","No alias","Solanum lycopersicum","Protein FAR1-RELATED SEQUENCE 6 (AHRD V3.3 *** W9R3Q8_9ROSA)","protein_coding"
"Solyc03g117540","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *-* A0A097P9P6_HEVBR)","protein_coding"
"Solyc03g118350","No alias","Solanum lycopersicum","dual specificity protein phosphatase family protein (AHRD V3.3 *** AT5G23720.2)","protein_coding"
"Solyc04g014940","No alias","Solanum lycopersicum","Glucose-1-phosphate adenylyltransferase family protein (AHRD V3.3 --* AT2G21590.7)","protein_coding"
"Solyc04g015830","No alias","Solanum lycopersicum","villin 2 (AHRD V3.3 *** AT2G41740.2)","protein_coding"
"Solyc04g040110","No alias","Solanum lycopersicum","Kinesin motor family protein (AHRD V3.3 *** B9H942_POPTR)","protein_coding"
"Solyc04g040170","No alias","Solanum lycopersicum","DNA-directed RNA polymerase II, putative (AHRD V3.3 *** B9ST46_RICCO)","protein_coding"
"Solyc04g054700","No alias","Solanum lycopersicum","GTF2H2 (AHRD V3.3 *** A0A097PR28_PRUPE)","protein_coding"
"Solyc04g074400","No alias","Solanum lycopersicum","Phosphate-responsive 1 family protein, putative (AHRD V3.3 *** A0A061FGC9_THECC)","protein_coding"
"Solyc04g074760","No alias","Solanum lycopersicum","BEST plant protein match is: (TAIR:plant.1) protein, putative (AHRD V3.3 *** G7J4G3_MEDTR)","protein_coding"
"Solyc04g076100","No alias","Solanum lycopersicum","Pesticidal crystal cry8Ba (AHRD V3.3 *** A0A0B0MPH2_GOSAR)","protein_coding"
"Solyc04g079290","No alias","Solanum lycopersicum","heme oxygenase 2","protein_coding"
"Solyc05g006160","No alias","Solanum lycopersicum","Gibberellin-regulated family protein (AHRD V3.3 *** G7LER1_MEDTR)","protein_coding"
"Solyc05g006950","No alias","Solanum lycopersicum","Embryo yellow protein (AHRD V3.3 *** K4BWM1_SOLLC)","protein_coding"
"Solyc05g007230","No alias","Solanum lycopersicum","Receptor-like kinase (AHRD V3.3 *** A0A0K9NLV5_ZOSMR)","protein_coding"
"Solyc05g018490","No alias","Solanum lycopersicum","Copper ion-binding protein, putative (AHRD V3.3 *** G7JBR2_MEDTR)","protein_coding"
"Solyc05g021100","No alias","Solanum lycopersicum","Pleckstrin-like (PH) domain protein (AHRD V3.3 *** G7K3B9_MEDTR)","protein_coding"
"Solyc05g050320","No alias","Solanum lycopersicum","Glycosyl hydrolase superfamily protein (AHRD V3.3 *** AT4G01040.2)","protein_coding"
"Solyc05g054980","No alias","Solanum lycopersicum","Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha (AHRD V3.3 *** A0A0B0NW47_GOSAR)","protein_coding"
"Solyc05g055240","No alias","Solanum lycopersicum","I-box binding factor","protein_coding"
"Solyc05g056110","No alias","Solanum lycopersicum","decapping 2 (AHRD V3.3 *** AT5G13570.1)","protein_coding"
"Solyc06g005920","No alias","Solanum lycopersicum","epstein-barr nuclear antigen (AHRD V3.3 --* AT3G14830.4)","protein_coding"
"Solyc06g007130","No alias","Solanum lycopersicum","omega-3 fatty acid desaturase-3","protein_coding"
"Solyc06g009530","No alias","Solanum lycopersicum","Carbohydrate-binding-like fold protein (AHRD V3.3 *** A0A097PPL4_SOLLC)","protein_coding"
"Solyc06g009600","No alias","Solanum lycopersicum","LOW QUALITY:HIT zinc finger,PAPA-1-like conserved region, putative (AHRD V3.3 *-* A0A061F305_THECC)","protein_coding"
"Solyc06g050720","No alias","Solanum lycopersicum","Ca(2+)-dependent nuclease family protein (AHRD V3.3 *** AT2G40410.2)","protein_coding"
"Solyc06g051210","No alias","Solanum lycopersicum","Bromodomain-containing protein (AHRD V3.3 *** B9R8P3_RICCO)","protein_coding"
"Solyc06g051810","No alias","Solanum lycopersicum","XH/XS domain-containing family protein (AHRD V3.3 *** B9HTH7_POPTR)","protein_coding"
"Solyc06g061010","No alias","Solanum lycopersicum","senescence-associated family protein (DUF581) (AHRD V3.3 *-* AT4G17670.1)","protein_coding"
"Solyc06g061160","No alias","Solanum lycopersicum","LOW QUALITY:Zinc finger, C2H2 (AHRD V3.3 *** A0A103XFH7_CYNCS)","protein_coding"
"Solyc06g063140","No alias","Solanum lycopersicum","26S protease regulatory subunit, putative (AHRD V3.3 *** B9RR13_RICCO)","protein_coding"
"Solyc06g066100","No alias","Solanum lycopersicum","Alba DNA/RNA-binding protein (AHRD V3.3 *** AT2G34160.1)","protein_coding"
"Solyc06g068520","No alias","Solanum lycopersicum","Hydroxyproline-rich systemin (AHRD V3.3 *** HSY1_SOLLC)","protein_coding"
"Solyc06g072030","No alias","Solanum lycopersicum","disease resistance protein (TIR-NBS class) (AHRD V3.3 --* AT4G16990.9)","protein_coding"
"Solyc06g073610","No alias","Solanum lycopersicum","cyclin B1","protein_coding"
"Solyc06g074840","No alias","Solanum lycopersicum","Vacuolar protein sorting-associated protein 24 like 1 (AHRD V3.3 *** A0A0B2QEZ9_GLYSO)","protein_coding"
"Solyc06g075540","No alias","Solanum lycopersicum","hydrolase family protein / HAD-superfamily protein (AHRD V3.3 *** AT3G45740.1)","protein_coding"
"Solyc06g082390","No alias","Solanum lycopersicum","RNA-directed DNA methylation 4 (AHRD V3.3 *** AT2G30280.1)","protein_coding"
"Solyc06g082660","No alias","Solanum lycopersicum","26S protease regulatory subunit 6B homolog (AHRD V3.3 *** PRS6B_SOLTU)","protein_coding"
"Solyc06g083790","No alias","Solanum lycopersicum","succinyl CoA ligase beta subunit","protein_coding"
"Solyc06g084200","No alias","Solanum lycopersicum","flocculation FLO11-like protein (AHRD V3.3 *** AT4G02715.2)","protein_coding"
"Solyc07g005770","No alias","Solanum lycopersicum","LOW QUALITY:Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS)","protein_coding"
"Solyc07g007340","No alias","Solanum lycopersicum","Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A0K9Q428_ZOSMR)","protein_coding"
"Solyc07g007640","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase, putative (AHRD V3.3 *** B9SXP1_RICCO)","protein_coding"
"Solyc07g007850","No alias","Solanum lycopersicum","SPOC domain / Transcription elongation factor S-II protein (AHRD V3.3 *-* AT2G25640.2)","protein_coding"
"Solyc07g008160","No alias","Solanum lycopersicum","Nuclear pore complex protein Nup155 (AHRD V3.3 *** A0A0B2Q912_GLYSO)","protein_coding"
"Solyc07g017770","No alias","Solanum lycopersicum","Homogentisate phytyltransferase (AHRD V3.3 *** F1BPV8_SOLPN)","protein_coding"
"Solyc07g017990","No alias","Solanum lycopersicum","DNA ligase (AHRD V3.3 *** K4CCL3_SOLLC)","protein_coding"
"Solyc07g022920","No alias","Solanum lycopersicum","BSD domain-containing family protein (AHRD V3.3 *** B9IBP6_POPTR)","protein_coding"
"Solyc07g032590","No alias","Solanum lycopersicum","LOW QUALITY:Arginine decarboxylase (AHRD V3.3 *-* A0A0B0PHR9_GOSAR)","protein_coding"
"Solyc07g045200","No alias","Solanum lycopersicum","LOW QUALITY:serine-rich protein-like protein (AHRD V3.3 *-* AT5G55980.1)","protein_coding"
"Solyc07g054110","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9RW07_RICCO)","protein_coding"
"Solyc07g055780","No alias","Solanum lycopersicum","Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)","protein_coding"
"Solyc07g056060","No alias","Solanum lycopersicum","pesticidal crystal cry8Ba protein (AHRD V3.3 *** AT4G24610.1)","protein_coding"
"Solyc07g066300","No alias","Solanum lycopersicum","DNA gyrase subunit B (AHRD V3.3 *-* A0A1D1Z0E0_9ARAE)","protein_coding"
"Solyc08g008290","No alias","Solanum lycopersicum","UDP-Glycosyltransferase superfamily protein (AHRD V3.3 --* AT5G65685.2)","protein_coding"
"Solyc08g013980","No alias","Solanum lycopersicum","histone H2A deubiquitinase (DUF3755) (AHRD V3.3 *** AT3G07565.1)","protein_coding"
"Solyc08g023440","No alias","Solanum lycopersicum","Early-responsive to dehydration stress family protein (AHRD V3.3 *** B9GJG0_POPTR)","protein_coding"
"Solyc08g060860","No alias","Solanum lycopersicum","DUF4050 family protein (AHRD V3.3 *** G7JE31_MEDTR)","protein_coding"
"Solyc08g066580","No alias","Solanum lycopersicum","nuclear pore complex Nup85-like protein (AHRD V3.3 *** AT4G32910.1)","protein_coding"
"Solyc08g066630","No alias","Solanum lycopersicum","LOW QUALITY:F-box/LRR-repeat protein 4 (AHRD V3.3 *-* A0A1D1XF78_9ARAE)","protein_coding"
"Solyc08g074390","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SPT8_RICCO)","protein_coding"
"Solyc08g082610","No alias","Solanum lycopersicum","DCD (Development and Cell Death) domain protein (AHRD V3.3 *** AT5G42050.1)","protein_coding"
"Solyc08g083280","No alias","Solanum lycopersicum","Alcohol dehydrogenase, putative (AHRD V3.3 *** B9RYV6_RICCO)","protein_coding"
"Solyc09g007460","No alias","Solanum lycopersicum","POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein (AHRD V3.3 *** AT3G09730.2)","protein_coding"
"Solyc09g008020","No alias","Solanum lycopersicum","OTU domain-containing protein (AHRD V3.3 *** A0A199VP67_ANACO)","protein_coding"
"Solyc09g009790","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IGL4_POPTR)","protein_coding"
"Solyc09g011450","No alias","Solanum lycopersicum","Proteasome inhibitor-related (AHRD V3.3 *** A0A061ERS7_THECC)","protein_coding"
"Solyc09g011930","No alias","Solanum lycopersicum","mRNA capping enzyme family protein (AHRD V3.3 *** AT3G09100.2)","protein_coding"
"Solyc09g065010","No alias","Solanum lycopersicum","mRNA capping enzyme family protein (AHRD V3.3 *-* AT3G09100.2)","protein_coding"
"Solyc09g072810","No alias","Solanum lycopersicum","Receptor protein kinase, putative (AHRD V3.3 *** B9SKP2_RICCO)","protein_coding"
"Solyc09g074340","No alias","Solanum lycopersicum","Rho GTPase-activating protein (AHRD V3.3 *** A0A0K9PZI3_ZOSMR)","protein_coding"
"Solyc09g074900","No alias","Solanum lycopersicum","Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (AHRD V3.3 *** ALG3_ARATH)","protein_coding"
"Solyc09g074950","No alias","Solanum lycopersicum","ATPase family AAA domain-containing protein 1 (AHRD V3.3 *** A0A0B0NTB1_GOSAR)","protein_coding"
"Solyc09g075120","No alias","Solanum lycopersicum","UDP-glucuronic acid decarboxylase 1 (AHRD V3.3 *** A0A0B0MR69_GOSAR)","protein_coding"
"Solyc09g089750","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* AT1G06650.2)","protein_coding"
"Solyc09g091170","No alias","Solanum lycopersicum","NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (AHRD V3.3 *** A0A151U305_CAJCA)","protein_coding"
"Solyc10g005560","No alias","Solanum lycopersicum","Ubiquitin, putative (AHRD V3.3 *** B9RI09_RICCO)","protein_coding"
"Solyc10g007150","No alias","Solanum lycopersicum","Apoptosis inhibitory 5 (AHRD V3.3 *** A0A103XEZ4_CYNCS)","protein_coding"
"Solyc10g007700","No alias","Solanum lycopersicum","Ras-related protein (AHRD V3.3 *** W9R1W6_9ROSA)","protein_coding"
"Solyc10g008010","No alias","Solanum lycopersicum","Proteasome subunit alpha type (AHRD V3.3 *** K4CXX8_SOLLC)","protein_coding"
"Solyc10g008210","No alias","Solanum lycopersicum","Targeting protein for Xklp2 (AHRD V3.3 *** A0A0B2QW97_GLYSO)","protein_coding"
"Solyc10g008800","No alias","Solanum lycopersicum","Apoptosis inhibitory 5 (AHRD V3.3 *** A0A103XEZ4_CYNCS)","protein_coding"
"Solyc10g009050","No alias","Solanum lycopersicum","DUF616 family protein (AHRD V3.3 *** A0A072UMP6_MEDTR)","protein_coding"
"Solyc10g045280","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g074700","No alias","Solanum lycopersicum","Ethanolamine-phosphate cytidylyltransferase (AHRD V3.3 *** PECT1_ARATH)","protein_coding"
"Solyc10g074810","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT5G01960.1)","protein_coding"
"Solyc10g076910","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)","protein_coding"
"Solyc10g078950","No alias","Solanum lycopersicum","Carbon catabolite repressor 4-like protein (AHRD V3.3 *** A0A0B0P8G6_GOSAR)","protein_coding"
"Solyc10g080190","No alias","Solanum lycopersicum","LOW QUALITY:Ozone-responsive stress related protein (AHRD V3.3 *** I0J1A1_ORYRU)","protein_coding"
"Solyc10g080430","No alias","Solanum lycopersicum","C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072TGP1_MEDTR)","protein_coding"
"Solyc10g083270","No alias","Solanum lycopersicum","alpha/beta hydrolase domain-containing protein 11-like (ABHD11)","protein_coding"
"Solyc11g005020","No alias","Solanum lycopersicum","Protein translocase subunit SecA (AHRD V3.3 *** K4D4B5_SOLLC)","protein_coding"
"Solyc11g006430","No alias","Solanum lycopersicum","LOW QUALITY:Glutaredoxin family protein, putative (AHRD V3.3 *** A0A061FWX9_THECC)","protein_coding"
"Solyc11g008390","No alias","Solanum lycopersicum","U-box domain-containing protein (AHRD V3.3 *** A0A0K9PZF9_ZOSMR)","protein_coding"
"Solyc11g012530","No alias","Solanum lycopersicum","Phosphoglycerate mutase-like family protein (AHRD V3.3 --* AT3G01310.3)","protein_coding"
"Solyc11g013090","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *-* M0ZK20_SOLTU)","protein_coding"
"Solyc11g013550","No alias","Solanum lycopersicum","transmembrane 50A-like protein (AHRD V3.3 *** AT1G36980.2)","protein_coding"
"Solyc11g018500","No alias","Solanum lycopersicum","Beta-galactosidase (AHRD V3.3 *** A0A022QYX4_ERYGU)","protein_coding"
"Solyc11g018740","No alias","Solanum lycopersicum","Inner membrane OXA1-like protein (AHRD V3.3 *-* G7KQL5_MEDTR)","protein_coding"
"Solyc11g039880","No alias","Solanum lycopersicum","Nuclear pore complex protein Nup188a (AHRD V3.3 *** W6JJC0_NICBE)","protein_coding"
"Solyc11g066370","No alias","Solanum lycopersicum","DNA ligase (AHRD V3.3 *** K4D9P5_SOLLC)","protein_coding"
"Solyc11g068660","No alias","Solanum lycopersicum","OTU-like cysteine protease family protein (AHRD V3.3 *** B9HQ41_POPTR)","protein_coding"
"Solyc11g069000","No alias","Solanum lycopersicum","T-complex protein 1 subunit beta (AHRD V3.3 *** TCPB_ARATH)","protein_coding"
"Solyc11g069150","No alias","Solanum lycopersicum","Proteasome subunit beta type (AHRD V3.3 *** K4DA71_SOLLC)","protein_coding"
"Solyc11g069460","No alias","Solanum lycopersicum","Double-stranded RNA binding protein, putative (AHRD V3.3 *** B9SVC8_RICCO)","protein_coding"
"Solyc11g069520","No alias","Solanum lycopersicum","Sulfotransferase (AHRD V3.3 *** D7SKZ6_VITVI)","protein_coding"
"Solyc12g008980","No alias","Solanum lycopersicum","Delta","protein_coding"
"Solyc12g014400","No alias","Solanum lycopersicum","Cell differentiation protein RCD1 like (AHRD V3.3 *** A0A0B2NW74_GLYSO)","protein_coding"
"Solyc12g015650","No alias","Solanum lycopersicum","U-box domain-containing protein 4 (AHRD V3.3 *** W9REK9_9ROSA)","protein_coding"
"Solyc12g020000","No alias","Solanum lycopersicum","Arginine/serine-rich coiled-coil 2 (AHRD V3.3 *** A0A0B0NVA2_GOSAR)","protein_coding"
"Solyc12g038590","No alias","Solanum lycopersicum","Rhomboid-like protein (AHRD V3.3 *** K4DEK8_SOLLC)","protein_coding"
"Solyc12g049590","No alias","Solanum lycopersicum","1-phosphatidylinositol-3-phosphate 5-kinase (AHRD V3.3 *** W9R271_9ROSA)","protein_coding"
"Solyc12g049630","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g055910","No alias","Solanum lycopersicum","RING/U-box protein (AHRD V3.3 *** A0A072TWI2_MEDTR)","protein_coding"
"Solyc12g095810","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1)","protein_coding"
"Solyc12g095870","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** A0A059LJJ8_9CHLO)","protein_coding"
"Sopen00g010200","No alias","Solanum pennellii","ATP dependent DNA ligase domain","protein_coding"
"Sopen02g035770","No alias","Solanum pennellii","ATP dependent DNA ligase domain","protein_coding"
"Sopen07g006910","No alias","Solanum pennellii","DNA ligase N terminus","protein_coding"
"Sopen07g006920","No alias","Solanum pennellii","DNA ligase N terminus","protein_coding"
"Sopen11g026120","No alias","Solanum pennellii","ATP dependent DNA ligase domain","protein_coding"