"sequence_id","alias","species","description","type"
"111807","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"121495","No alias","Selaginella moellendorffii ","Protein of unknown function, DUF547","protein_coding"
"145611","No alias","Selaginella moellendorffii ","glutamate:glyoxylate aminotransferase","protein_coding"
"153563","No alias","Selaginella moellendorffii ","glycine decarboxylase P-protein 2","protein_coding"
"163526","No alias","Selaginella moellendorffii ","RNI-like superfamily protein","protein_coding"
"165987","No alias","Selaginella moellendorffii ","UDP-GLUCOSE PYROPHOSPHORYLASE 1","protein_coding"
"166088","No alias","Selaginella moellendorffii ","photosynthetic electron transfer C","protein_coding"
"174630","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"177305","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF399 and DUF3411)","protein_coding"
"177791","No alias","Selaginella moellendorffii ","solanesyl diphosphate synthase 1","protein_coding"
"17835","No alias","Selaginella moellendorffii ","Lactoylglutathione lyase / glyoxalase I family protein","protein_coding"
"179380","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A7","protein_coding"
"183183","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A3","protein_coding"
"184811","No alias","Selaginella moellendorffii ","trehalose-6-phosphate synthase","protein_coding"
"230724","No alias","Selaginella moellendorffii ","thioredoxin M-type 4","protein_coding"
"232963","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"266585","No alias","Selaginella moellendorffii ","Aldolase-type TIM barrel family protein","protein_coding"
"267533","No alias","Selaginella moellendorffii ","Phosphoglycerate kinase family protein","protein_coding"
"268623","No alias","Selaginella moellendorffii ","rubisco activase","protein_coding"
"270698","No alias","Selaginella moellendorffii ","Aldolase superfamily protein","protein_coding"
"271586","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"38984","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414734","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"422162","No alias","Selaginella moellendorffii ","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"438100","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"439234","No alias","Selaginella moellendorffii ","ARABIDOPSIS SERIN PROTEASE","protein_coding"
"440304","No alias","Selaginella moellendorffii ","signal responsive 1","protein_coding"
"440924","No alias","Selaginella moellendorffii ","HXXXD-type acyl-transferase family protein","protein_coding"
"442478","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"442777","No alias","Selaginella moellendorffii ","RNA-binding protein-defense related 1","protein_coding"
"444108","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"445683","No alias","Selaginella moellendorffii ","ferric reduction oxidase 6","protein_coding"
"448933","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"61688","No alias","Selaginella moellendorffii ","auxin response factor 16","protein_coding"
"76749","No alias","Selaginella moellendorffii ","STT7 homolog STN7","protein_coding"
"78366","No alias","Selaginella moellendorffii ","ABC2 homolog 13","protein_coding"
"81096","No alias","Selaginella moellendorffii ","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"96997","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"97070","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"97883","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"99030","No alias","Selaginella moellendorffii ","multidrug resistance-associated protein 6","protein_coding"
"A4A49_25302","No alias","Nicotiana attenuata","cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic","protein_coding"
"At1g04985","No alias","Arabidopsis thaliana","Triacylglycerol lipase-like protein [Source:UniProtKB/TrEMBL;Acc:Q84JL8]","protein_coding"
"At1g06870","No alias","Arabidopsis thaliana","Probable thylakoidal processing peptidase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Z2]","protein_coding"
"At1g07470","No alias","Arabidopsis thaliana","At1g07470/F22G5_13 [Source:UniProtKB/TrEMBL;Acc:Q93VP4]","protein_coding"
"At1g09340","No alias","Arabidopsis thaliana","chloroplast RNA binding [Source:TAIR;Acc:AT1G09340]","protein_coding"
"At1g09560","No alias","Arabidopsis thaliana","Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]","protein_coding"
"At1g14340","No alias","Arabidopsis thaliana","RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:Q949S4]","protein_coding"
"At1g14450","No alias","Arabidopsis thaliana","NADH dehydrogenase (ubiquinone)s [Source:TAIR;Acc:AT1G14450]","protein_coding"
"At1g15170","No alias","Arabidopsis thaliana","Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WNL0]","protein_coding"
"At1g18160","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IAN2]","protein_coding"
"At1g22510","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) [Source:UniProtKB/TrEMBL;Acc:F4I1E4]","protein_coding"
"At1g33330","No alias","Arabidopsis thaliana","Class I peptide chain release factor [Source:UniProtKB/TrEMBL;Acc:Q9C875]","protein_coding"
"At1g42970","No alias","Arabidopsis thaliana","Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P25857]","protein_coding"
"At1g47210","No alias","Arabidopsis thaliana","Cyclin-A3-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6A9]","protein_coding"
"At1g47840","No alias","Arabidopsis thaliana","Hexokinase-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FZG4]","protein_coding"
"At1g48230","No alias","Arabidopsis thaliana","UDP-Apiose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJV9]","protein_coding"
"At1g53000","No alias","Arabidopsis thaliana","Nucleotide-diphospho-sugar transferases superfamily protein [Source:TAIR;Acc:AT1G53000]","protein_coding"
"At1g65230","No alias","Arabidopsis thaliana","Transmembrane protein, putative (DUF2358) [Source:UniProtKB/TrEMBL;Acc:Q8L604]","protein_coding"
"At1g71500","No alias","Arabidopsis thaliana","Rieske (2Fe-2S) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9C9I7]","protein_coding"
"At1g71860","No alias","Arabidopsis thaliana","Protein-tyrosine-phosphatase PTP1 [Source:UniProtKB/Swiss-Prot;Acc:O82656]","protein_coding"
"At1g73060","No alias","Arabidopsis thaliana","Protein LOW PSII ACCUMULATION 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W0]","protein_coding"
"At1g73840","No alias","Arabidopsis thaliana","Hydroxyproline-rich glycoprotein family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYM7]","protein_coding"
"At1g79510","No alias","Arabidopsis thaliana","T8K14.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAJ8]","protein_coding"
"At1g80260","No alias","Arabidopsis thaliana","Gamma-tubulin complex component [Source:UniProtKB/TrEMBL;Acc:Q0WPZ0]","protein_coding"
"At1g80860","No alias","Arabidopsis thaliana","Phosphatidyl-N-methylethanolamine N-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH5]","protein_coding"
"At2g15570","No alias","Arabidopsis thaliana","Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIH6]","protein_coding"
"At2g17200","No alias","Arabidopsis thaliana","Ubiquitin domain-containing protein DSK2b [Source:UniProtKB/Swiss-Prot;Acc:Q9SII8]","protein_coding"
"At2g18770","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT2G18770]","protein_coding"
"At2g20860","No alias","Arabidopsis thaliana","Lipoyl synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT1]","protein_coding"
"At2g24860","No alias","Arabidopsis thaliana","At2g24860/F27C12.22 [Source:UniProtKB/TrEMBL;Acc:Q9SK46]","protein_coding"
"At2g28950","No alias","Arabidopsis thaliana","EXPA6 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL6]","protein_coding"
"At2g43970","No alias","Arabidopsis thaliana","La-related protein 6B [Source:UniProtKB/Swiss-Prot;Acc:O80567]","protein_coding"
"At3g01500","No alias","Arabidopsis thaliana","Beta carbonic anhydrase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P27140]","protein_coding"
"At3g02600","No alias","Arabidopsis thaliana","Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]","protein_coding"
"At3g03090","No alias","Arabidopsis thaliana","D-xylose-proton symporter-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z8]","protein_coding"
"At3g07190","No alias","Arabidopsis thaliana","At3g07190 [Source:UniProtKB/TrEMBL;Acc:Q9SFU9]","protein_coding"
"At3g12780","No alias","Arabidopsis thaliana","Phosphoglycerate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178V5M8]","protein_coding"
"At3g21160","No alias","Arabidopsis thaliana","Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H116]","protein_coding"
"At3g26980","No alias","Arabidopsis thaliana","Membrane-anchored ubiquitin-fold protein [Source:UniProtKB/TrEMBL;Acc:A0A178VGS7]","protein_coding"
"At3g45770","No alias","Arabidopsis thaliana","Enoyl-[acyl-carrier-protein] reductase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LCU7]","protein_coding"
"At3g54210","No alias","Arabidopsis thaliana","50S ribosomal protein L17, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M385]","protein_coding"
"At3g55030","No alias","Arabidopsis thaliana","PGPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VAK6]","protein_coding"
"At3g63410","No alias","Arabidopsis thaliana","2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LY74]","protein_coding"
"At3g63490","No alias","Arabidopsis thaliana","50S ribosomal protein L1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LY66]","protein_coding"
"At4g01310","No alias","Arabidopsis thaliana","50S ribosomal protein L5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O04603]","protein_coding"
"At4g03280","No alias","Arabidopsis thaliana","Cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR03]","protein_coding"
"At4g20030","No alias","Arabidopsis thaliana","At4g20030 [Source:UniProtKB/TrEMBL;Acc:Q67XI5]","protein_coding"
"At4g31340","No alias","Arabidopsis thaliana","AT4G31340 protein [Source:UniProtKB/TrEMBL;Acc:Q8GUN1]","protein_coding"
"At4g36780","No alias","Arabidopsis thaliana","BES1/BZR1 homolog 2 [Source:TAIR;Acc:AT4G36780]","protein_coding"
"At4g36910","No alias","Arabidopsis thaliana","CBS domain-containing protein CBSX1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23193]","protein_coding"
"At4g38240","No alias","Arabidopsis thaliana","Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9XGM8]","protein_coding"
"At5g04440","No alias","Arabidopsis thaliana","At5g04440 [Source:UniProtKB/TrEMBL;Acc:Q500X2]","protein_coding"
"At5g06130","No alias","Arabidopsis thaliana","Protein ORANGE-LIKE, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VYD8]","protein_coding"
"At5g16710","No alias","Arabidopsis thaliana","DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]","protein_coding"
"At5g24500","No alias","Arabidopsis thaliana","Fantom protein [Source:UniProtKB/TrEMBL;Acc:Q84J91]","protein_coding"
"At5g27290","No alias","Arabidopsis thaliana","At5g27290 [Source:UniProtKB/TrEMBL;Acc:Q08AA8]","protein_coding"
"At5g40580","No alias","Arabidopsis thaliana","Proteasome subunit beta type-7-B [Source:UniProtKB/Swiss-Prot;Acc:Q7DLS1]","protein_coding"
"At5g44130","No alias","Arabidopsis thaliana","Fasciclin-like arabinogalactan protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH6]","protein_coding"
"At5g49940","No alias","Arabidopsis thaliana","NifU-like protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93W20]","protein_coding"
"At5g53170","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM0]","protein_coding"
"At5g56650","No alias","Arabidopsis thaliana","At5g56650 [Source:UniProtKB/TrEMBL;Acc:Q67YZ8]","protein_coding"
"At5g58640","No alias","Arabidopsis thaliana","AT5g58640/mzn1_90 [Source:UniProtKB/TrEMBL;Acc:Q8W1E5]","protein_coding"
"At5g62890","No alias","Arabidopsis thaliana","Nucleobase-ascorbate transporter 6 [Source:UniProtKB/Swiss-Prot;Acc:Q27GI3]","protein_coding"
"At5g67130","No alias","Arabidopsis thaliana","PI-PLC X domain-containing protein At5g67130 [Source:UniProtKB/Swiss-Prot;Acc:Q93XX5]","protein_coding"
"Bradi1g04700","No alias","Brachypodium distachyon","photosystem I subunit D-2","protein_coding"
"Bradi1g11090","No alias","Brachypodium distachyon","GRAS family transcription factor family protein","protein_coding"
"Bradi1g13900","No alias","Brachypodium distachyon","amino acid transporter 1","protein_coding"
"Bradi1g14860","No alias","Brachypodium distachyon","Subtilase family protein","protein_coding"
"Bradi1g17460","No alias","Brachypodium distachyon","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Bradi1g17810","No alias","Brachypodium distachyon","CBL-interacting protein kinase 12","protein_coding"
"Bradi1g23610","No alias","Brachypodium distachyon","photosystem I light harvesting complex gene 2","protein_coding"
"Bradi1g24870","No alias","Brachypodium distachyon","light harvesting complex photosystem II","protein_coding"
"Bradi1g24980","No alias","Brachypodium distachyon","photosynthetic electron transfer C","protein_coding"
"Bradi1g25430","No alias","Brachypodium distachyon","photosystem II subunit QA","protein_coding"
"Bradi1g26350","No alias","Brachypodium distachyon","ATPase, F1 complex, gamma subunit protein","protein_coding"
"Bradi1g35210","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g43950","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g46622","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi1g49010","No alias","Brachypodium distachyon","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Bradi1g51970","No alias","Brachypodium distachyon","Phosphoglycerate mutase family protein","protein_coding"
"Bradi1g54030","No alias","Brachypodium distachyon","chloroplast stem-loop binding protein of  41 kDa","protein_coding"
"Bradi1g56580","No alias","Brachypodium distachyon","photosystem II subunit O-2","protein_coding"
"Bradi1g58160","No alias","Brachypodium distachyon","photosystem II subunit P-1","protein_coding"
"Bradi1g58350","No alias","Brachypodium distachyon","photosystem I subunit K","protein_coding"
"Bradi1g63190","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Bradi1g63300","No alias","Brachypodium distachyon","photosystem II family protein","protein_coding"
"Bradi1g64160","No alias","Brachypodium distachyon","NFU domain protein 1","protein_coding"
"Bradi1g65900","No alias","Brachypodium distachyon","Ribosomal protein L10 family protein","protein_coding"
"Bradi1g67020","No alias","Brachypodium distachyon","high cyclic electron flow 1","protein_coding"
"Bradi1g73200","No alias","Brachypodium distachyon","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Bradi1g74030","No alias","Brachypodium distachyon","Protein of unknown function (DUF3464)","protein_coding"
"Bradi1g76290","No alias","Brachypodium distachyon","chloroplast signal recognition particle component (CAO)","protein_coding"
"Bradi1g76450","No alias","Brachypodium distachyon","NADH-ubiquinone oxidoreductase B18 subunit, putative","protein_coding"
"Bradi1g76470","No alias","Brachypodium distachyon","glyceraldehyde-3-phosphate dehydrogenase B subunit","protein_coding"
"Bradi1g76550","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g76940","No alias","Brachypodium distachyon","BEL1-like homeodomain 2","protein_coding"
"Bradi2g06620","No alias","Brachypodium distachyon","phosphoenolpyruvate carboxylase 3","protein_coding"
"Bradi2g16810","No alias","Brachypodium distachyon","photosystem I subunit H2","protein_coding"
"Bradi2g24420","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi2g25910","No alias","Brachypodium distachyon","thylakoid lumen 18.3 kDa protein","protein_coding"
"Bradi2g25984","No alias","Brachypodium distachyon","ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein","protein_coding"
"Bradi2g40870","No alias","Brachypodium distachyon","DCD (Development and Cell Death) domain protein","protein_coding"
"Bradi2g42508","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g47430","No alias","Brachypodium distachyon","UDP-glucosyl transferase 88A1","protein_coding"
"Bradi2g48940","No alias","Brachypodium distachyon","pathogenesis-related family protein","protein_coding"
"Bradi2g49906","No alias","Brachypodium distachyon","WRKY DNA-binding protein 65","protein_coding"
"Bradi2g52660","No alias","Brachypodium distachyon","Nucleotide-sugar transporter family protein","protein_coding"
"Bradi2g55430","No alias","Brachypodium distachyon","Transmembrane amino acid transporter family protein","protein_coding"
"Bradi3g01990","No alias","Brachypodium distachyon","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Bradi3g10120","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g13170","No alias","Brachypodium distachyon","2Fe-2S ferredoxin-like superfamily protein","protein_coding"
"Bradi3g15327","No alias","Brachypodium distachyon","protodermal factor 2","protein_coding"
"Bradi3g16100","No alias","Brachypodium distachyon","Protein of unknown function (DUF1005)","protein_coding"
"Bradi3g27506","No alias","Brachypodium distachyon","secE/sec61-gamma protein transport protein","protein_coding"
"Bradi3g27610","No alias","Brachypodium distachyon","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Bradi3g37730","No alias","Brachypodium distachyon","Family of unknown function (DUF716)","protein_coding"
"Bradi3g39830","No alias","Brachypodium distachyon","Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein","protein_coding"
"Bradi3g40190","No alias","Brachypodium distachyon","Photosystem II reaction center PsbP family protein","protein_coding"
"Bradi3g49570","No alias","Brachypodium distachyon","nuclear-encoded CLP protease P7","protein_coding"
"Bradi3g51820","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi3g53860","No alias","Brachypodium distachyon","translocon at the inner envelope membrane of chloroplasts 55-II","protein_coding"
"Bradi3g56270","No alias","Brachypodium distachyon","ATPase, F0 complex, subunit B/B\', bacterial/chloroplast","protein_coding"
"Bradi3g57230","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi3g57380","No alias","Brachypodium distachyon","protochlorophyllide oxidoreductase A","protein_coding"
"Bradi3g59130","No alias","Brachypodium distachyon","ATP synthase delta-subunit gene","protein_coding"
"Bradi3g59430","No alias","Brachypodium distachyon","Pyridine nucleotide-disulphide oxidoreductase family protein","protein_coding"
"Bradi3g60000","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g08020","No alias","Brachypodium distachyon","photosystem I subunit l","protein_coding"
"Bradi4g14937","No alias","Brachypodium distachyon","3-ketoacyl-CoA synthase 2","protein_coding"
"Bradi4g28070","No alias","Brachypodium distachyon","Chalcone and stilbene synthase family protein","protein_coding"
"Bradi4g29780","No alias","Brachypodium distachyon","elicitor-activated gene 3-1","protein_coding"
"Bradi4g31257","No alias","Brachypodium distachyon","photosystem I light harvesting complex gene 6","protein_coding"
"Bradi4g33940","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi4g36370","No alias","Brachypodium distachyon","PLC-like phosphodiesterases superfamily protein","protein_coding"
"Bradi4g40800","No alias","Brachypodium distachyon","thioredoxin M-type 4","protein_coding"
"Bradi5g09530","No alias","Brachypodium distachyon","photosystem I subunit O","protein_coding"
"Bradi5g10210","No alias","Brachypodium distachyon","Subtilase family protein","protein_coding"
"Bradi5g11100","No alias","Brachypodium distachyon","RmlC-like cupins superfamily protein","protein_coding"
"Bradi5g12330","No alias","Brachypodium distachyon","glyceraldehyde 3-phosphate dehydrogenase A subunit 2","protein_coding"
"Bradi5g13710","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g15360","No alias","Brachypodium distachyon","ammonium transporter 1;1","protein_coding"
"Bradi5g19000","No alias","Brachypodium distachyon","histone H1-3","protein_coding"
"Bradi5g22290","No alias","Brachypodium distachyon","Glycine cleavage T-protein family","protein_coding"
"Bradi5g26610","No alias","Brachypodium distachyon","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Cre01.g010900","No alias","Chlamydomonas reinhardtii","glyceraldehyde-3-phosphate dehydrogenase B subunit","protein_coding"
"Cre01.g030250","No alias","Chlamydomonas reinhardtii","Inositol monophosphatase family protein","protein_coding"
"Cre01.g042800","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre01.g046652","No alias","Chlamydomonas reinhardtii","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Cre01.g052250","No alias","Chlamydomonas reinhardtii","thioredoxin X","protein_coding"
"Cre02.g073700","No alias","Chlamydomonas reinhardtii","Uroporphyrinogen decarboxylase","protein_coding"
"Cre02.g084300","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre02.g095133","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre02.g095450","No alias","Chlamydomonas reinhardtii","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Cre02.g109600","No alias","Chlamydomonas reinhardtii","myo-inositol monophosphatase like 1","protein_coding"
"Cre02.g120100","No alias","Chlamydomonas reinhardtii","ribulose bisphosphate carboxylase small chain 1A","protein_coding"
"Cre02.g145050","No alias","Chlamydomonas reinhardtii","4-(cytidine 5\'-phospho)-2-C-methyl-D-erithritol kinase","protein_coding"
"Cre03.g151650","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre03.g174750","No alias","Chlamydomonas reinhardtii","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Cre03.g185550","No alias","Chlamydomonas reinhardtii","sedoheptulose-bisphosphatase","protein_coding"
"Cre03.g187450","No alias","Chlamydomonas reinhardtii","Ribose 5-phosphate isomerase, type A protein","protein_coding"
"Cre03.g194450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g197750","No alias","Chlamydomonas reinhardtii","glutathione peroxidase 1","protein_coding"
"Cre03.g200350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g206550","No alias","Chlamydomonas reinhardtii","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Cre03.g209841","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g234550","No alias","Chlamydomonas reinhardtii","fructose-bisphosphate aldolase 2","protein_coding"
"Cre05.g247450","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre06.g259401","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre06.g269050","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre06.g284600","No alias","Chlamydomonas reinhardtii","Rubredoxin-like superfamily protein","protein_coding"
"Cre07.g312701","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g320600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g325500","No alias","Chlamydomonas reinhardtii","magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)","protein_coding"
"Cre07.g335700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g346400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g346900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g346950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g366050","No alias","Chlamydomonas reinhardtii","nudix hydrolase homolog 3","protein_coding"
"Cre08.g380100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g396300","No alias","Chlamydomonas reinhardtii","Flavin containing amine oxidoreductase family","protein_coding"
"Cre10.g424100","No alias","Chlamydomonas reinhardtii","pyrophosphorylase 6","protein_coding"
"Cre10.g435850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467569","No alias","Chlamydomonas reinhardtii","ATP synthase delta-subunit gene","protein_coding"
"Cre11.g467689","No alias","Chlamydomonas reinhardtii","photosynthetic electron transfer C","protein_coding"
"Cre11.g467770","No alias","Chlamydomonas reinhardtii","Phosphoglycerate kinase family protein","protein_coding"
"Cre11.g476750","No alias","Chlamydomonas reinhardtii","root FNR 1","protein_coding"
"Cre11.g481450","No alias","Chlamydomonas reinhardtii","ATPase, F0 complex, subunit B/B\', bacterial/chloroplast","protein_coding"
"Cre12.g494850","No alias","Chlamydomonas reinhardtii","adenosine monophosphate kinase","protein_coding"
"Cre12.g496700","No alias","Chlamydomonas reinhardtii","thioredoxin F-type 1","protein_coding"
"Cre12.g508350","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre12.g509050","No alias","Chlamydomonas reinhardtii","PsbP-like protein 1","protein_coding"
"Cre12.g510050","No alias","Chlamydomonas reinhardtii","dicarboxylate diiron protein, putative (Crd1)","protein_coding"
"Cre12.g510400","No alias","Chlamydomonas reinhardtii","rubredoxin family protein","protein_coding"
"Cre12.g510650","No alias","Chlamydomonas reinhardtii","high cyclic electron flow 1","protein_coding"
"Cre12.g530100","No alias","Chlamydomonas reinhardtii","Acid phosphatase/vanadium-dependent haloperoxidase-related protein","protein_coding"
"Cre12.g531900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g534250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g546150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g558900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g566000","No alias","Chlamydomonas reinhardtii","10-formyltetrahydrofolate synthetase","protein_coding"
"Cre13.g573250","No alias","Chlamydomonas reinhardtii","sulfurtransferase protein 16","protein_coding"
"Cre13.g576760","No alias","Chlamydomonas reinhardtii","Chlorophyll A-B binding family protein","protein_coding"
"Cre13.g588201","No alias","Chlamydomonas reinhardtii","RAP","protein_coding"
"Cre13.g602450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g602650","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre14.g615850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g637100","No alias","Chlamydomonas reinhardtii","ubiquitin family protein","protein_coding"
"Cre16.g650050","No alias","Chlamydomonas reinhardtii","Rhodanese/Cell cycle control phosphatase superfamily protein","protein_coding"
"Cre16.g650100","No alias","Chlamydomonas reinhardtii","electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs","protein_coding"
"Cre16.g656650","No alias","Chlamydomonas reinhardtii","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Cre16.g659800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g669450","No alias","Chlamydomonas reinhardtii","ATP-dependent protease La (LON) domain protein","protein_coding"
"Cre16.g669452","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g679669","No alias","Chlamydomonas reinhardtii","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"Cre16.g684350","No alias","Chlamydomonas reinhardtii","glyoxylate reductase 1","protein_coding"
"Cre17.g696350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g715500","No alias","Chlamydomonas reinhardtii","Thioredoxin superfamily protein","protein_coding"
"evm.model.contig_2025.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2031.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2045.9","No alias","Porphyridium purpureum","(at3g10920 : 210.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p11796|sodm_nicpl : 204.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2106.1","No alias","Porphyridium purpureum","(at5g50330 : 107.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2113.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2121.18","No alias","Porphyridium purpureum","(at4g03410 : 93.6) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT1G52870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2142.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2146.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2153.1","No alias","Porphyridium purpureum","(q42711|mdars_cucsa : 363.0) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (at3g52880 : 357.0) Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2; monodehydroascorbate reductase 1 (MDAR1); CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 30852 Blast hits to 30793 proteins in 3038 species: Archae - 685; Bacteria - 24210; Metazoa - 865; Fungi - 584; Plants - 707; Viruses - 0; Other Eukaryotes - 3801 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2174.7","No alias","Porphyridium purpureum","(at2g43560 : 83.2) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2260.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2271.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2273.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2288.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2291.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2291.9","No alias","Porphyridium purpureum",""(at5g36120 : 98.6) ""cofactor assembly, complex C (B6F)"" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2302.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2302.5","No alias","Porphyridium purpureum","(at1g34065 : 136.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2340.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2343.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2347.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2353.4","No alias","Porphyridium purpureum","(at1g32080 : 127.0) membrane protein, putative; LOCATED IN: chloroplast, chloroplast inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LrgB-like protein (InterPro:IPR007300); Has 3603 Blast hits to 3592 proteins in 1271 species: Archae - 22; Bacteria - 3356; Metazoa - 0; Fungi - 58; Plants - 57; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2663.4","No alias","Porphyridium purpureum","(p14226|psbo_pea : 251.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Pisum sativum (Garden pea) & (at5g66570 : 235.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type.; PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3389.1","No alias","Porphyridium purpureum","(at4g22890 : 145.0) Encodes PGRL1A, a transmembrane protein present in thylakoids.  PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-LIKE A; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 112 Blast hits to 112 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3392.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3392.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3399.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3399.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3405.14","No alias","Porphyridium purpureum","(at1g07010 : 171.0) Calcineurin-like metallo-phosphoesterase superfamily protein; BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G18480.1); Has 109 Blast hits to 109 proteins in 48 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 8; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3421.1","No alias","Porphyridium purpureum","(at3g54890 : 82.4) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_3431.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3466.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3471.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3593.4","No alias","Porphyridium purpureum","(at3g10840 : 102.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3604.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3695.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3727.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3750.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3802.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_435.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4400.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.29","No alias","Porphyridium purpureum","(at2g03870 : 112.0) Small nuclear ribonucleoprotein family protein; CONTAINS InterPro DOMAIN/s: U6 snRNA-associated Sm-like protein LSm7 (InterPro:IPR017132), Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: probable small nuclear ribonucleoprotein G (TAIR:AT2G23930.1); Has 1450 Blast hits to 1450 proteins in 289 species: Archae - 222; Bacteria - 0; Metazoa - 489; Fungi - 323; Plants - 216; Viruses - 0; Other Eukaryotes - 200 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4404.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4406.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_441.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_441.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_442.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4476.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4478.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4480.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4527.3","No alias","Porphyridium purpureum","(at4g24730 : 89.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_477.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_479.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_480.4","No alias","Porphyridium purpureum","(at2g35120 : 134.0) Single hybrid motif superfamily protein; FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine catabolic process, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930), Glycine cleavage H-protein, subgroup (InterPro:IPR017453); BEST Arabidopsis thaliana protein match is: Single hybrid motif superfamily protein (TAIR:AT1G32470.1); Has 7147 Blast hits to 7147 proteins in 2201 species: Archae - 168; Bacteria - 4552; Metazoa - 187; Fungi - 130; Plants - 205; Viruses - 0; Other Eukaryotes - 1905 (source: NCBI BLink). & (o22535|gcsh_orysa : 131.0) Glycine cleavage system H protein, mitochondrial precursor - Oryza sativa (Rice) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_493.29","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_496.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_529.1","No alias","Porphyridium purpureum","(at4g03280 : 198.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (p49728|ucria_chlre : 192.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Chlamydomonas reinhardtii & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_533.9","No alias","Porphyridium purpureum","(q39566|gsa_chlre : 640.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (at3g48730 : 597.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (reliability: 1194.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_567.10","No alias","Porphyridium purpureum","(at5g14800 : 187.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (p17817|p5cr_soybn : 180.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Glycine max (Soybean) & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_578.1","No alias","Porphyridium purpureum","(at3g52960 : 101.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_647.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_725.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_746.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_758.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_776.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.85","No alias","Cyanophora paradoxa","(at1g03630 : 342.0) Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.; protochlorophyllide oxidoreductase C (POR C); FUNCTIONS IN: oxidoreductase activity, NADPH dehydrogenase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase A (TAIR:AT5G54190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q42850|porb_horvu : 337.0) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000135.1","No alias","Cyanophora paradoxa","(at1g32900 : 423.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (q43092|ssg1_pea : 412.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Pisum sativum (Garden pea) & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.36","No alias","Cyanophora paradoxa","(p09043|g3pa_tobac : 459.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g26650 : 457.0) Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).; glyceraldehyde 3-phosphate dehydrogenase A subunit (GAPA); FUNCTIONS IN: protein binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (TAIR:AT1G12900.1); Has 24893 Blast hits to 24884 proteins in 6192 species: Archae - 47; Bacteria - 10870; Metazoa - 2226; Fungi - 2780; Plants - 3758; Viruses - 0; Other Eukaryotes - 5212 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.103","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.142","No alias","Cyanophora paradoxa","(o24163|ppoc_tobac : 218.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (at4g01690 : 217.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000293.24","No alias","Cyanophora paradoxa","(at1g16080 : 232.0) unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000655.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000658.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.29","No alias","Cyanophora paradoxa","(at3g55800 : 366.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (o20252|s17p_spiol : 356.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000718.44","No alias","Cyanophora paradoxa","(o64422|f16p1_orysa : 328.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Oryza sativa (Rice) & (at3g54050 : 327.0) Encodes HCEF1 (High Cyclic Electron Flow 1).  Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000803.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000803.4","No alias","Cyanophora paradoxa","(at3g12520 : 189.0) Encodes a sulfate transporter that in induced under sulfate limitation.; sulfate transporter 4;2 (SULTR4;2); FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 4.1 (TAIR:AT5G13550.1). & (q02920|no70_soybn : 113.0) Early nodulin 70 - Glycine max (Soybean) & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000829.31","No alias","Cyanophora paradoxa","(at5g10810 : 106.0) enhancer of rudimentary homolog ATER; ENHANCER OF RUDIMENTARY HOMOLOGUE (ER); CONTAINS InterPro DOMAIN/s: Enhancer of rudimentary (InterPro:IPR000781); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000851.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000881.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.16","No alias","Cyanophora paradoxa","(at5g50250 : 101.0) Encodes a RNA binding protein.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).  Supports editing of specific CP31A-dependent sites.; chloroplast RNA-binding protein 31B (CP31B); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, innate immune response; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: 31-kDa RNA binding protein (TAIR:AT4G24770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28644|roc1_spiol : 93.2) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.28","No alias","Cyanophora paradoxa","(p46267|f16p2_brana : 166.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at1g43670 : 163.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.19","No alias","Cyanophora paradoxa","(q9sbn3|ucria_volca : 214.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Volvox carteri & (at4g03280 : 211.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000980.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.27","No alias","Cyanophora paradoxa","(at5g66190 : 347.0) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase.  It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid.  The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme.  AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.; LEAF FNR 1 (ATLFNR1); FUNCTIONS IN: oxidoreductase activity, electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, poly(U) RNA binding, NADPH dehydrogenase activity, electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: oxidation reduction, photosynthetic electron transport chain, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 7407 Blast hits to 7407 proteins in 1806 species: Archae - 24; Bacteria - 3962; Metazoa - 817; Fungi - 811; Plants - 610; Viruses - 0; Other Eukaryotes - 1183 (source: NCBI BLink). & (p41343|fenr_mescr : 338.0) Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001033.18","No alias","Cyanophora paradoxa","(q9mus9|atpi_mesvi : 233.0) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14) (ATPase subunit IV) - Mesostigma viride & (atcg00150 : 214.0) Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.; ATPI; FUNCTIONS IN: hydrogen ion channel activity; INVOLVED IN: dATP biosynthetic process from ADP; LOCATED IN: chloroplast thylakoid membrane, chloroplast ATP synthase complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001056.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001095.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001155.5","No alias","Cyanophora paradoxa","(at1g52510 : 156.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001215.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001234.5","No alias","Cyanophora paradoxa","(q43772|ugpa_horvu : 385.0) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Hordeum vulgare (Barley) & (at5g17310 : 373.0) UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001269.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001388.13","No alias","Cyanophora paradoxa","(o22101|hemh_orysa : 414.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (at2g30390 : 413.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis.  FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (reliability: 826.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001428.12","No alias","Cyanophora paradoxa","(at1g75460 : 119.0) ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001471.12","No alias","Cyanophora paradoxa","(at1g51560 : 114.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5&apos;-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 633 Blast hits to 633 proteins in 219 species: Archae - 0; Bacteria - 353; Metazoa - 24; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001525.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.18","No alias","Cyanophora paradoxa","(at5g13630 : 1562.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (reliability: 3124.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.167","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020564.39","No alias","Cyanophora paradoxa","(q43157|rpe_spiol : 244.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) - Spinacia oleracea (Spinach) & (at5g61410 : 241.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020601.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020604.16","No alias","Cyanophora paradoxa","(o82059|g6pi_spiol : 596.0) Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) - Spinacia oleracea (Spinach) & (at5g42740 : 587.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.123","No alias","Cyanophora paradoxa","(at4g04640 : 306.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p05435|atpg_spiol : 306.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Spinacia oleracea (Spinach) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.77","No alias","Cyanophora paradoxa","(at4g28706 : 105.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G43910.2). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.36","No alias","Cyanophora paradoxa","(at4g14305 : 89.7) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G04470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.89","No alias","Cyanophora paradoxa","(at2g44740 : 108.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020725.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.8","No alias","Cyanophora paradoxa","(at4g18240 : 154.0) starch synthase 4 (SS4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 3 (TAIR:AT1G11720.1); Has 55451 Blast hits to 38117 proteins in 4040 species: Archae - 1014; Bacteria - 10985; Metazoa - 22418; Fungi - 3875; Plants - 6050; Viruses - 242; Other Eukaryotes - 10867 (source: NCBI BLink). & (q43846|ssy3_soltu : 119.0) Soluble starch synthase 3, chloroplast precursor (EC 2.4.1.21) (SS III) (Soluble starch synthase III) - Solanum tuberosum (Potato) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.90","No alias","Cyanophora paradoxa","(p93431|rca_orysa : 98.6) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (at2g39730 : 96.7) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.91","No alias","Cyanophora paradoxa","(p10871|rca_spiol : 291.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Spinacia oleracea (Spinach) & (at2g39730 : 285.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.150","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.22","No alias","Cyanophora paradoxa","(p26302|kppr_wheat : 497.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 477.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (reliability: 954.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020911.42","No alias","Cyanophora paradoxa","(p12359|psbo_spiol : 137.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Spinacia oleracea (Spinach) & (at5g66570 : 129.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type.; PS II oxygen-evolving complex 1 (PSBO1); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: in 6 processes; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: photosystem II subunit O-2 (TAIR:AT3G50820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020911.43","No alias","Cyanophora paradoxa","(p14226|psbo_pea : 106.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Pisum sativum (Garden pea) & (at3g50820 : 102.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020927.55","No alias","Cyanophora paradoxa","(at1g18270 : 133.0) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021017.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.50","No alias","Cyanophora paradoxa","(at5g51820 : 383.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional  PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (q9smm0|pgmp_brana : 382.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Brassica napus (Rape) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021105.51","No alias","Cyanophora paradoxa","(q9sm59|pgmp_pea : 290.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Pisum sativum (Garden pea) & (at5g51820 : 288.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional  PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021123.35","No alias","Cyanophora paradoxa","(q9sbn4|pgkh_volca : 421.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 404.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021128.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021293.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021312.63","No alias","Cyanophora paradoxa","(at2g26830 : 105.0) embryo defective 1187 (emb1187); CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1627 Blast hits to 1577 proteins in 424 species: Archae - 0; Bacteria - 424; Metazoa - 442; Fungi - 246; Plants - 164; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021319.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021494.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021494.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021501.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021590.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.40","No alias","Cyanophora paradoxa","(at5g54310 : 154.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.  Regulates membrane trafficking and organ separation.; ARF-GAP domain 5 (AGD5); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: floral organ abscission, activation of ARF GTPase activity; LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15 (TAIR:AT3G17660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"Glyma.01G005400","No alias","Glycine max","phosphofructokinase 3","protein_coding"
"Glyma.01G188100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G214300","No alias","Glycine max","PGR5-LIKE A","protein_coding"
"Glyma.02G015300","No alias","Glycine max","galacturonosyltransferase-like 7","protein_coding"
"Glyma.02G087800","No alias","Glycine max","Transcriptional coactivator/pterin dehydratase","protein_coding"
"Glyma.02G197600","No alias","Glycine max","NDR1/HIN1-like 1","protein_coding"
"Glyma.03G017600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.03G123100","No alias","Glycine max","Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein","protein_coding"
"Glyma.03G219300","No alias","Glycine max","basic region/leucine zipper motif 53","protein_coding"
"Glyma.03G247400","No alias","Glycine max","indoleacetic acid-induced protein 16","protein_coding"
"Glyma.04G014500","No alias","Glycine max","Photosystem II reaction center PsbP family protein","protein_coding"
"Glyma.04G015900","No alias","Glycine max","glyceraldehyde-3-phosphate dehydrogenase B subunit","protein_coding"
"Glyma.04G066000","No alias","Glycine max","ATPase, F0 complex, subunit B/B\', bacterial/chloroplast","protein_coding"
"Glyma.04G116500","No alias","Glycine max","ankyrin repeat-containing 2B","protein_coding"
"Glyma.04G191700","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.04G239800","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding"
"Glyma.04G242000","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding"
"Glyma.05G007100","No alias","Glycine max","carbonic anhydrase 1","protein_coding"
"Glyma.05G129900","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.06G067400","No alias","Glycine max","ATPase, F0 complex, subunit B/B\', bacterial/chloroplast","protein_coding"
"Glyma.06G153400","No alias","Glycine max","NAD(P)H:plastoquinone dehydrogenase complex subunit O","protein_coding"
"Glyma.06G176900","No alias","Glycine max","RAB GTPase homolog E1B","protein_coding"
"Glyma.06G221100","No alias","Glycine max","phloem protein 2-A9","protein_coding"
"Glyma.06G224200","No alias","Glycine max","chloroplast thylakoid lumen protein","protein_coding"
"Glyma.07G019400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G049000","No alias","Glycine max","photosystem I P subunit","protein_coding"
"Glyma.07G075100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G090700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G141400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G175800","No alias","Glycine max","Aldolase-type TIM barrel family protein","protein_coding"
"Glyma.08G238400","No alias","Glycine max","SNARE associated Golgi protein family","protein_coding"
"Glyma.08G260300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G261800","No alias","Glycine max","Protein of unknown function (DUF1218)","protein_coding"
"Glyma.09G093900","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.09G111700","No alias","Glycine max","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding"
"Glyma.09G227100","No alias","Glycine max","Protein of unknown function (DUF3411)","protein_coding"
"Glyma.09G272400","No alias","Glycine max","nuclear shuttle interacting","protein_coding"
"Glyma.10G153100","No alias","Glycine max","Photosystem II reaction center PsbP family protein","protein_coding"
"Glyma.10G263000","No alias","Glycine max","stress enhanced protein 1","protein_coding"
"Glyma.10G281400","No alias","Glycine max","hydroxypyruvate reductase","protein_coding"
"Glyma.10G283100","No alias","Glycine max","Protein of unknown function (DUF3353)","protein_coding"
"Glyma.11G042200","No alias","Glycine max","glycine decarboxylase complex H","protein_coding"
"Glyma.11G054000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G100800","No alias","Glycine max","photosystem II stability/assembly factor, chloroplast (HCF136)","protein_coding"
"Glyma.11G110000","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.11G124800","No alias","Glycine max","plastid transcriptionally active 4","protein_coding"
"Glyma.12G009700","No alias","Glycine max","Protein of unknown function (DUF3411)","protein_coding"
"Glyma.12G090100","No alias","Glycine max","Protein of unknown function (DUF3049)","protein_coding"
"Glyma.12G136300","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.12G148600","No alias","Glycine max","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Glyma.12G199400","No alias","Glycine max","photosynthetic electron transfer C","protein_coding"
"Glyma.13G046200","No alias","Glycine max","Ribulose bisphosphate carboxylase (small chain) family protein","protein_coding"
"Glyma.13G069100","No alias","Glycine max","ferredoxin thioredoxin reductase catalytic beta chain family protein","protein_coding"
"Glyma.13G141700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G204800","No alias","Glycine max","ATPase, F1 complex, gamma subunit protein","protein_coding"
"Glyma.13G210800","No alias","Glycine max","glutamine synthetase 2","protein_coding"
"Glyma.13G302900","No alias","Glycine max","photosynthetic electron transfer C","protein_coding"
"Glyma.13G335100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G023900","No alias","Glycine max","peptide met sulfoxide reductase 4","protein_coding"
"Glyma.14G218200","No alias","Glycine max","DnaJ/Hsp40 cysteine-rich domain superfamily protein","protein_coding"
"Glyma.15G061100","No alias","Glycine max","methionine sulfoxide reductase B 2","protein_coding"
"Glyma.15G102000","No alias","Glycine max","glutamine synthetase 2","protein_coding"
"Glyma.15G107900","No alias","Glycine max","ATPase, F1 complex, gamma subunit protein","protein_coding"
"Glyma.15G143600","No alias","Glycine max","chitinase-like protein 2","protein_coding"
"Glyma.15G188500","No alias","Glycine max","pyruvate dehydrogenase kinase","protein_coding"
"Glyma.15G197200","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding"
"Glyma.15G219400","No alias","Glycine max","Ca(2)-dependent phospholipid-binding protein (Copine) family","protein_coding"
"Glyma.15G250800","No alias","Glycine max","Aldolase-type TIM barrel family protein","protein_coding"
"Glyma.16G168000","No alias","Glycine max","Inositol monophosphatase family protein","protein_coding"
"Glyma.16G200100","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.16G207800","No alias","Glycine max","catalytic LigB subunit of aromatic ring-opening dioxygenase family","protein_coding"
"Glyma.17G071200","No alias","Glycine max","Ribosomal protein L35","protein_coding"
"Glyma.17G101700","No alias","Glycine max","D-ribulose-5-phosphate-3-epimerase","protein_coding"
"Glyma.17G140600","No alias","Glycine max","Lactate/malate dehydrogenase family protein","protein_coding"
"Glyma.18G021300","No alias","Glycine max","Plant protein of unknown function (DUF827)","protein_coding"
"Glyma.18G028400","No alias","Glycine max","light harvesting complex photosystem II","protein_coding"
"Glyma.18G039100","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.19G000200","No alias","Glycine max","ferredoxin/thioredoxin reductase subunit A (variable subunit) 2","protein_coding"
"Glyma.19G007700","No alias","Glycine max","carbonic anhydrase 1","protein_coding"
"Glyma.19G013800","No alias","Glycine max","ferredoxin thioredoxin reductase catalytic beta chain family protein","protein_coding"
"Glyma.19G041300","No alias","Glycine max","TRICHOME BIREFRINGENCE-LIKE 19","protein_coding"
"Glyma.19G227700","No alias","Glycine max","chloroplast RNA binding","protein_coding"
"Glyma.19G258300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G082800","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.20G104000","No alias","Glycine max","thioredoxin X","protein_coding"
"Glyma.20G141100","No alias","Glycine max","PPDK regulatory protein","protein_coding"
"Glyma.20G218200","No alias","Glycine max","Polyketide cyclase/dehydrase and lipid transport superfamily protein","protein_coding"
"GRMZM2G038365","No alias","Zea mays","photosynthetic electron transfer C","protein_coding"
"GRMZM2G162748","No alias","Zea mays","photosynthetic electron transfer C","protein_coding"
"Kfl00026_0040","kfl00026_0040_v1.1","Klebsormidium nitens","(p29344|rr1_spiol : 344.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 332.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"Kfl00093_0320","kfl00093_0320_v1.1","Klebsormidium nitens","(o65349|rbs_capan : 181.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Capsicum annuum (Bell pepper) & (at1g67090 : 176.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"Kfl00346_0010","kfl00346_0010_v1.1","Klebsormidium nitens","(at1g71140 : 206.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G15150.1); Has 10143 Blast hits to 10059 proteins in 1990 species: Archae - 227; Bacteria - 7201; Metazoa - 146; Fungi - 330; Plants - 1347; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"Kfl00433_0020","kfl00433_0020_v1.1","Klebsormidium nitens","(q69gy7|ucria_soltu : 223.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Solanum tuberosum (Potato) & (at4g03280 : 220.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g08660","No alias","Oryza sativa","aquaporin protein, putative, expressed","protein_coding"
"LOC_Os01g10600","No alias","Oryza sativa","aquaporin protein, putative, expressed","protein_coding"
"LOC_Os01g39270","No alias","Oryza sativa","NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed","protein_coding"
"LOC_Os01g39280","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g40094","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os01g42090","No alias","Oryza sativa","nodulin MtN3 family protein, putative, expressed","protein_coding"
"LOC_Os01g42310","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os01g58335","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g61510","No alias","Oryza sativa","ammonium transporter protein, putative, expressed","protein_coding"
"LOC_Os01g68450","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g74280","No alias","Oryza sativa","TGD2, putative, expressed","protein_coding"
"LOC_Os02g05000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g28600","No alias","Oryza sativa","OsFBX50 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os02g29390","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g37690","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed","protein_coding"
"LOC_Os02g42030","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os02g44940","No alias","Oryza sativa","RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed","protein_coding"
"LOC_Os02g48800","No alias","Oryza sativa","PHD finger family protein, putative, expressed","protein_coding"
"LOC_Os02g53250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g03770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g15480","No alias","Oryza sativa","heat shock protein DnaJ, putative, expressed","protein_coding"
"LOC_Os03g19380","No alias","Oryza sativa","calvin cycle protein CP12, putative, expressed","protein_coding"
"LOC_Os03g44890","No alias","Oryza sativa","anthranilate phosphoribosyltransferase, putative, expressed","protein_coding"
"LOC_Os03g58580","No alias","Oryza sativa","nodulin, putative, expressed","protein_coding"
"LOC_Os03g59470","No alias","Oryza sativa","stage II sporulation protein E, putative, expressed","protein_coding"
"LOC_Os04g07860","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g43310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g57420","No alias","Oryza sativa","reticulon domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g04600","No alias","Oryza sativa","ABC transmembrane transporter domain containing protein, expressed","protein_coding"
"LOC_Os05g08730","No alias","Oryza sativa","early fruit mRNA, putative, expressed","protein_coding"
"LOC_Os05g25640","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os05g33510","No alias","Oryza sativa","peptide methionine sulfoxide reductase msrB, putative, expressed","protein_coding"
"LOC_Os05g39400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g04140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g17890","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g34910","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g39510","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g40818","No alias","Oryza sativa","aspartic proteinase, putative, expressed","protein_coding"
"LOC_Os06g44150","No alias","Oryza sativa","CorA-like magnesium transporter protein, putative, expressed","protein_coding"
"LOC_Os06g49780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g01020","No alias","Oryza sativa","SOR/SNZ family protein, putative, expressed","protein_coding"
"LOC_Os07g01310","No alias","Oryza sativa","glutamate receptor, putative, expressed","protein_coding"
"LOC_Os07g08150","No alias","Oryza sativa","early light-induced protein, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os07g20340","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding"
"LOC_Os07g20610","No alias","Oryza sativa","TKL_IRAK_DUF26.2 - DUF26 kinases have homology to DUF26 containing loci, expressed","protein_coding"
"LOC_Os07g23485","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g33270","No alias","Oryza sativa","DUF584 domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g37030","No alias","Oryza sativa","cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os07g41580","No alias","Oryza sativa","histone-like transcription factor and archaeal histone, putative, expressed","protein_coding"
"LOC_Os07g44820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g32720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g44320","No alias","Oryza sativa","low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed","protein_coding"
"LOC_Os09g02400","No alias","Oryza sativa","RNA-binding region RNP-1, putative, expressed","protein_coding"
"LOC_Os09g34860","No alias","Oryza sativa","hydrolase, alpha/beta fold family domain containing protein, expressed","protein_coding"
"LOC_Os09g36100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g09360","No alias","Oryza sativa","SAM dependent carboxyl methyltransferase family protein, putative, expressed","protein_coding"
"LOC_Os10g37720","No alias","Oryza sativa","hydrolase, alpha/beta fold family protein, putative, expressed","protein_coding"
"LOC_Os10g38238","No alias","Oryza sativa","chloroplast 30S ribosomal protein S14, putative, expressed","protein_coding"
"LOC_Os11g13770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g33100","No alias","Oryza sativa","SNARE associated Golgi protein, putative, expressed","protein_coding"
"LOC_Os11g34450","No alias","Oryza sativa","14-3-3 protein, putative, expressed","protein_coding"
"LOC_Os11g45570","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g04924","No alias","Oryza sativa","ubiquitin-like protein 5, putative, expressed","protein_coding"
"LOC_Os12g10630","No alias","Oryza sativa","ZF-HD protein dimerisation region containing protein, expressed","protein_coding"
"LOC_Os12g12170","No alias","Oryza sativa","cytochrome b5-like Heme/Steroid binding domain containing protein, expressed","protein_coding"
"LOC_Os12g18670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g33610","No alias","Oryza sativa","phenylalanine ammonia-lyase, putative, expressed","protein_coding"
"LOC_Os12g38580","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g38640","No alias","Oryza sativa","expressed protein","protein_coding"
"Potri.013G148900","No alias","Populus trichocarpa","photosynthetic electron transfer C","protein_coding"
"Potri.019G118500","No alias","Populus trichocarpa","photosynthetic electron transfer C","protein_coding"
"Pp1s101_241V6","No alias","Physcomitrella patens","fad-dependent pyridine nucleotide-disulphide oxidoreductase","protein_coding"
"Pp1s103_67V6","No alias","Physcomitrella patens","ycf37 (arabidopsis homolog of synechocystis ycf37)","protein_coding"
"Pp1s109_241V6","No alias","Physcomitrella patens","peroxisomal glycolate oxidase","protein_coding"
"Pp1s10_393V6","No alias","Physcomitrella patens","atp synthase delta chain","protein_coding"
"Pp1s112_169V6","No alias","Physcomitrella patens","cytochrome b6-f complex iron-sulfur subunit","protein_coding"
"Pp1s114_123V6","No alias","Physcomitrella patens","uroporphyrinogen decarboxylase","protein_coding"
"Pp1s115_90V6","No alias","Physcomitrella patens","glutathione peroxidase 1","protein_coding"
"Pp1s11_39V6","No alias","Physcomitrella patens","oxygen-evolving enhancer protein chloroplast","protein_coding"
"Pp1s120_139V6","No alias","Physcomitrella patens","F2N1.31; hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s12_231V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding"
"Pp1s130_227V6","No alias","Physcomitrella patens","tocopherol cyclase","protein_coding"
"Pp1s136_41V6","No alias","Physcomitrella patens","family protein","protein_coding"
"Pp1s138_38V6","No alias","Physcomitrella patens","F7F22.5; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s13_20V6","No alias","Physcomitrella patens","glutamyl-trna reductase chloroplast","protein_coding"
"Pp1s13_282V6","No alias","Physcomitrella patens","dna binding","protein_coding"
"Pp1s13_405V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s142_132V6","No alias","Physcomitrella patens","inorganic pyrophosphatase","protein_coding"
"Pp1s143_177V6","No alias","Physcomitrella patens","ferredoxin (2fe-2s)","protein_coding"
"Pp1s145_122V6","No alias","Physcomitrella patens","MKP11.2; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s146_112V6","No alias","Physcomitrella patens","protochlorophyllide reductase b","protein_coding"
"Pp1s15_408V6","No alias","Physcomitrella patens","photosystem i reaction center subunit xi","protein_coding"
"Pp1s15_409V6","No alias","Physcomitrella patens","photosystem ii 10 kda polypeptide","protein_coding"
"Pp1s160_114V6","No alias","Physcomitrella patens","MAF19.5; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s167_126V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s16_274V6","No alias","Physcomitrella patens","proton gradient regulation 5","protein_coding"
"Pp1s16_358V6","No alias","Physcomitrella patens","atp synthase delta chain","protein_coding"
"Pp1s174_62V6","No alias","Physcomitrella patens","serine threonine protein","protein_coding"
"Pp1s185_3V6","No alias","Physcomitrella patens","MWC10.2; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s195_22V6","No alias","Physcomitrella patens","pas pac sensor hybrid histidine kinase","protein_coding"
"Pp1s197_123V6","No alias","Physcomitrella patens","type iii chlorophyll a b-binding protein","protein_coding"
"Pp1s197_85V6","No alias","Physcomitrella patens","copper-transporting atpase","protein_coding"
"Pp1s201_3V6","No alias","Physcomitrella patens","GTP-binding protein YPTC1 [Chlamydomonas reinhardtii]","protein_coding"
"Pp1s204_104V6","No alias","Physcomitrella patens","Hypothetical protein F59A2.6 [Caenorhabditis elegans]","protein_coding"
"Pp1s212_44V6","No alias","Physcomitrella patens","ferredoxin-dependent glutamate synthase","protein_coding"
"Pp1s213_80V6","No alias","Physcomitrella patens","lhcsr1 gene for putative chlorophyll a-b binding protein LHCSR1","protein_coding"
"Pp1s215_28V6","No alias","Physcomitrella patens","alanine aminotransferase","protein_coding"
"Pp1s221_46V6","No alias","Physcomitrella patens","udp-galactose 4-epimerase-like protein","protein_coding"
"Pp1s22_207V6","No alias","Physcomitrella patens","ring finger protein [Cyanidioschyzon merolae]","protein_coding"
"Pp1s24_26V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s256_38V6","No alias","Physcomitrella patens","glutamyl-trna reductase chloroplast","protein_coding"
"Pp1s25_131V6","No alias","Physcomitrella patens","F18A5.30; myb family transcription factor [Arabidopsis thaliana]","protein_coding"
"Pp1s263_33V6","No alias","Physcomitrella patens","plastoquinol-plastocyanin reductase","protein_coding"
"Pp1s265_4V6","No alias","Physcomitrella patens","zinc ion binding","protein_coding"
"Pp1s268_34V6","No alias","Physcomitrella patens","contains ESTs AU101298(E4372),D48939(S15524) similar to Arabidopsis thaliana chromosome 1, F25A4.30 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s270_57V6","No alias","Physcomitrella patens","rieske (2fe-2s) domain protein","protein_coding"
"Pp1s276_86V6","No alias","Physcomitrella patens","glycine cleavage system p-protein","protein_coding"
"Pp1s27_130V6","No alias","Physcomitrella patens","chloroplast precursor","protein_coding"
"Pp1s28_391V6","No alias","Physcomitrella patens","K2A11.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s290_42V6","No alias","Physcomitrella patens","chlorophyllide a oxygenase","protein_coding"
"Pp1s294_44V6","No alias","Physcomitrella patens","MBK21.23; short-chain dehydrogenase/reductase (SDR) family protein [EC:1.3.1.34] [Arabidopsis thaliana]","protein_coding"
"Pp1s303_78V6","No alias","Physcomitrella patens","MUF9.1; imidazoleglycerol-phosphate synthase subunit H - like [Arabidopsis thaliana]","protein_coding"
"Pp1s30_262V6","No alias","Physcomitrella patens","magnesium chelatase subunit of protochlorophyllide reductase","protein_coding"
"Pp1s311_70V6","No alias","Physcomitrella patens","photosystem ii 13kd chloroplast precursor","protein_coding"
"Pp1s317_49V6","No alias","Physcomitrella patens","thioredoxin m -","protein_coding"
"Pp1s318_3V6","No alias","Physcomitrella patens","Chitin-inducible gibberellin-responsive protein 2 [Oryza sativa]","protein_coding"
"Pp1s325_68V6","No alias","Physcomitrella patens","lhy protein","protein_coding"
"Pp1s334_28V6","No alias","Physcomitrella patens","coq5 family","protein_coding"
"Pp1s336_57V6","No alias","Physcomitrella patens","phosphatidylcholine: diacylglycerol acyltransferase","protein_coding"
"Pp1s337_5V6","No alias","Physcomitrella patens","short-chain dehydrogenase reductase family protein","protein_coding"
"Pp1s33_305V6","No alias","Physcomitrella patens","F20D21.21; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s345_41V6","No alias","Physcomitrella patens","50s ribosomal protein l35","protein_coding"
"Pp1s34_237V6","No alias","Physcomitrella patens","pglp1 (2-phosphoglycolate phosphatase 1) phosphoglycolate phosphatase","protein_coding"
"Pp1s351_45V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s35_78V6","No alias","Physcomitrella patens","cytochrome b6-f complex iron-sulfur subunit","protein_coding"
"Pp1s3_520V6","No alias","Physcomitrella patens","chloroplast precursor","protein_coding"
"Pp1s406_11V6","No alias","Physcomitrella patens","F25A4.25; nodulin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s41_262V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s421_3V6","No alias","Physcomitrella patens","oxygen-evolving enhancer protein 1","protein_coding"
"Pp1s427_23V6","No alias","Physcomitrella patens","2-hydroxy-3-oxopropionate reductase","protein_coding"
"Pp1s44_106V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s458_5V6","No alias","Physcomitrella patens","MXC7.11; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s46_42V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding"
"Pp1s475_12V6","No alias","Physcomitrella patens","long chain acyl- synthetase","protein_coding"
"Pp1s48_151V6","No alias","Physcomitrella patens","nadp-dependent malate dehydrogenase","protein_coding"
"Pp1s53_229V6","No alias","Physcomitrella patens","F3E22.4; mov34 family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s545_4V6","No alias","Physcomitrella patens","ribulose- -bisphosphate carboxylase oxygenase small subunit","protein_coding"
"Pp1s55_140V6","No alias","Physcomitrella patens","mrna-binding protein","protein_coding"
"Pp1s59_356V6","No alias","Physcomitrella patens","iron-binding protein","protein_coding"
"Pp1s64_33V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s68_264V6","No alias","Physcomitrella patens","delta 9","protein_coding"
"Pp1s68_9V6","No alias","Physcomitrella patens","ubiquinone biosynthesis protein ubib","protein_coding"
"Pp1s69_223V6","No alias","Physcomitrella patens","chloroplast omega-3 fatty acid desaturase","protein_coding"
"Pp1s70_12V6","No alias","Physcomitrella patens","heat shock protein 70 -interacting","protein_coding"
"Pp1s71_89V6","No alias","Physcomitrella patens","unknown [Glycine max]","protein_coding"
"Pp1s73_31V6","No alias","Physcomitrella patens","thylakoid lumenalkdachloroplast precursor","protein_coding"
"Pp1s74_6V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s7_222V6","No alias","Physcomitrella patens","F9K21.200; transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s83_34V6","No alias","Physcomitrella patens","T13C7.15; DNAJ heat shock family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s90_13V6","No alias","Physcomitrella patens","T5L19.160; hydrolase, alpha/beta fold family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s93_152V6","No alias","Physcomitrella patens","atp-dependent clp protease adaptor protein","protein_coding"
"Pp1s93_74V6","No alias","Physcomitrella patens","lignan glucosyltransferase","protein_coding"
"Pp1s98_233V6","No alias","Physcomitrella patens","ferredoxin (2fe-2s)","protein_coding"
"Pp1s9_169V6","No alias","Physcomitrella patens","senescence-inducible chloroplast stay-green protein","protein_coding"
"PSME_00000645-RA","No alias","Pseudotsuga menziesii","(at1g45230 : 174.0) Protein of unknown function (DUF3223); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3223) (TAIR:AT3G46630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00000783-RA","No alias","Pseudotsuga menziesii","(q42967|dcup_tobac : 455.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 439.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"PSME_00001431-RA","No alias","Pseudotsuga menziesii","(at1g34065 : 268.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00002164-RA","No alias","Pseudotsuga menziesii","(at1g14030 : 388.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (p94026|rbcmt_tobac : 373.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"PSME_00002475-RA","No alias","Pseudotsuga menziesii","(p30361|ucria_tobac : 289.0) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) - Nicotiana tabacum (Common toba & (at4g03280 : 277.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"PSME_00003233-RA","No alias","Pseudotsuga menziesii","(at4g36530 : 232.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G19850.1); Has 21771 Blast hits to 21766 proteins in 2265 species: Archae - 246; Bacteria - 15770; Metazoa - 624; Fungi - 315; Plants - 912; Viruses - 5; Other Eukaryotes - 3899 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00004173-RA","No alias","Pseudotsuga menziesii","(at5g04440 : 121.0) Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT4G31115.1); Has 266 Blast hits to 266 proteins in 73 species: Archae - 0; Bacteria - 111; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"PSME_00005693-RA","No alias","Pseudotsuga menziesii","(at4g30950 : 585.0) Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.; fatty acid desaturase 6 (FAD6); FUNCTIONS IN: omega-6 fatty acid desaturase activity; INVOLVED IN: photoinhibition, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 3227 Blast hits to 3218 proteins in 733 species: Archae - 0; Bacteria - 1371; Metazoa - 67; Fungi - 380; Plants - 896; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (p48627|fad6c_brana : 585.0) Omega-6 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Brassica napus (Rape) & (reliability: 1170.0) &  (original description: no original description)","protein_coding"
"PSME_00005716-RA","No alias","Pseudotsuga menziesii","(at3g21580 : 242.0) cobalt ion transmembrane transporters; FUNCTIONS IN: cobalt ion transmembrane transporter activity; INVOLVED IN: cobalt ion transport, cobalamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalt transport protein (InterPro:IPR003339); Has 2014 Blast hits to 2014 proteins in 922 species: Archae - 36; Bacteria - 1790; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 484.0) &  (original description: no original description)","protein_coding"
"PSME_00007307-RA","No alias","Pseudotsuga menziesii","(at4g13670 : 210.0) plastid transcriptionally active 5 (PTAC5); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, metabolic process; LOCATED IN: plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan binding-like (InterPro:IPR002477), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 835 Blast hits to 827 proteins in 285 species: Archae - 9; Bacteria - 385; Metazoa - 155; Fungi - 28; Plants - 81; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00007480-RA","No alias","Pseudotsuga menziesii","(at3g13120 : 182.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848). & (q9m4y3|rr10_mescr : 182.0) 30S ribosomal protein S10, chloroplast precursor - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00009313-RA","No alias","Pseudotsuga menziesii","(at5g49940 : 159.0) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.; NIFU-like protein 2 (NFU2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: chloroplast organization, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075); BEST Arabidopsis thaliana protein match is: NFU domain protein 3 (TAIR:AT4G25910.1); Has 5633 Blast hits to 5549 proteins in 1523 species: Archae - 23; Bacteria - 2985; Metazoa - 160; Fungi - 151; Plants - 263; Viruses - 3; Other Eukaryotes - 2048 (source: NCBI BLink). & (q84lk7|nifu1_orysa : 135.0) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"PSME_00009642-RA","No alias","Pseudotsuga menziesii","(at3g61870 : 320.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"PSME_00010428-RA","No alias","Pseudotsuga menziesii","(at3g16260 : 138.0) Encodes a tRNase Z.; tRNAse Z4 (TRZ4); FUNCTIONS IN: 3'-tRNA processing endoribonuclease activity, catalytic activity; INVOLVED IN: tRNA 3'-end processing, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease Z (InterPro:IPR013471); BEST Arabidopsis thaliana protein match is: tRNAse Z3 (TAIR:AT1G52160.1); Has 6299 Blast hits to 4396 proteins in 1654 species: Archae - 442; Bacteria - 4351; Metazoa - 254; Fungi - 243; Plants - 108; Viruses - 0; Other Eukaryotes - 901 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"PSME_00011555-RA","No alias","Pseudotsuga menziesii","(at4g19390 : 142.0) Uncharacterised protein family (UPF0114); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0114, plant (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0114) (TAIR:AT5G13720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00011579-RA","No alias","Pseudotsuga menziesii","(p82192|rk5_spiol : 141.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (at4g01310 : 137.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00012071-RA","No alias","Pseudotsuga menziesii","(at3g07750 : 125.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1494 Blast hits to 1492 proteins in 343 species: Archae - 295; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00012116-RA","No alias","Pseudotsuga menziesii","(at1g11870 : 416.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o81983|sys_helan : 184.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"PSME_00012645-RA","No alias","Pseudotsuga menziesii","(at4g18480 : 524.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (p93162|chli_soybn : 517.0) Magnesium-chelatase subunit chlI, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Glycine max (Soybean) & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"PSME_00013306-RA","No alias","Pseudotsuga menziesii","(at1g17220 : 268.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 252.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00018484-RA","No alias","Pseudotsuga menziesii","(at2g34860 : 179.0) embryo sac development arrest 3 (EDA3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: megagametogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305); Has 773 Blast hits to 773 proteins in 260 species: Archae - 32; Bacteria - 427; Metazoa - 13; Fungi - 2; Plants - 175; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00018516-RA","No alias","Pseudotsuga menziesii","(at1g64430 : 410.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"PSME_00018733-RA","No alias","Pseudotsuga menziesii","(at3g63520 : 393.0) Encodes a protein with 9-<i>cis</i>-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including &#946;-carotene, lutein, zeaxanthin, and all-<i>trans</i>-violaxanthin.  When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial.  The enzyme did not cleave as efficiently carotenoids containing 9-<i>cis</i>-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (reliability: 786.0) &  (original description: no original description)","protein_coding"
"PSME_00018805-RA","No alias","Pseudotsuga menziesii","(o22101|hemh_orysa : 509.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Oryza sativa (Rice) & (at2g30390 : 502.0) Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis.  FC-II is speculated to operate in photosynthetic cytochromes; ferrochelatase 2 (FC2); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: heme biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase (InterPro:IPR001015), Ferrochelatase, active site (InterPro:IPR019772); BEST Arabidopsis thaliana protein match is: ferrochelatase 1 (TAIR:AT5G26030.2). & (reliability: 1004.0) &  (original description: no original description)","protein_coding"
"PSME_00022311-RA","No alias","Pseudotsuga menziesii","(at3g11470 : 225.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4&apos;-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT2G02770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"PSME_00022573-RA","No alias","Pseudotsuga menziesii","(at3g18390 : 286.0) embryo defective 1865 (EMB1865); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11; Bacteria - 10; Metazoa - 285; Fungi - 118; Plants - 447; Viruses - 43; Other Eukaryotes - 367 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"PSME_00030722-RA","No alias","Pseudotsuga menziesii","(at2g36885 : 207.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00030925-RA","No alias","Pseudotsuga menziesii","(at4g32520 : 209.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49358|glyn_flapr : 168.0) Serine hydroxymethyltransferase 2, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Flaveria pringlei & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00030979-RA","No alias","Pseudotsuga menziesii","(q08935|roc1_nicsy : 220.0) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (at2g37220 : 218.0) Encodes a chloroplast RNA binding protein.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"PSME_00031105-RA","No alias","Pseudotsuga menziesii","(at1g74240 : 263.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26278 Blast hits to 14077 proteins in 462 species: Archae - 0; Bacteria - 6; Metazoa - 11478; Fungi - 7540; Plants - 4581; Viruses - 0; Other Eukaryotes - 2673 (source: NCBI BLink). & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"PSME_00033055-RA","No alias","Pseudotsuga menziesii","(at4g25450 : 259.0) member of NAP subfamily; non-intrinsic ABC protein 8 (NAP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: transporter associated with antigen processing protein 2 (TAIR:AT5G39040.1); Has 420091 Blast hits to 380969 proteins in 4118 species: Archae - 7380; Bacteria - 326284; Metazoa - 9897; Fungi - 7311; Plants - 5559; Viruses - 14; Other Eukaryotes - 63646 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 189.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00033346-RA","No alias","Pseudotsuga menziesii","(at4g13590 : 84.3) Uncharacterized protein family (UPF0016); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727); BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G64150.1). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"PSME_00034650-RA","No alias","Pseudotsuga menziesii","(at4g27800 : 327.0) Choroplast protein phosphatase TAP38/PPH1 is  required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1.; thylakoid-associated phosphatase 38 (TAP38); FUNCTIONS IN: phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: photosynthetic electron transport chain, photosystem stoichiometry adjustment, dephosphorylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G31860.1); Has 5546 Blast hits to 5534 proteins in 320 species: Archae - 4; Bacteria - 50; Metazoa - 1347; Fungi - 661; Plants - 2413; Viruses - 9; Other Eukaryotes - 1062 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"PSME_00034918-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035173-RA","No alias","Pseudotsuga menziesii","(at3g46780 : 298.0) plastid transcriptionally active 16 (PTAC16); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1243 Blast hits to 1093 proteins in 359 species: Archae - 5; Bacteria - 555; Metazoa - 73; Fungi - 75; Plants - 168; Viruses - 22; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 596.0) &  (original description: no original description)","protein_coding"
"PSME_00035201-RA","No alias","Pseudotsuga menziesii","(at3g44680 : 363.0) Class I RPD3 type protein; histone deacetylase 9 (HDA9); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8723 Blast hits to 8511 proteins in 1453 species: Archae - 219; Bacteria - 3191; Metazoa - 1512; Fungi - 548; Plants - 472; Viruses - 0; Other Eukaryotes - 2781 (source: NCBI BLink). & (p56521|hdac_maize : 229.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 726.0) &  (original description: no original description)","protein_coding"
"PSME_00040861-RA","No alias","Pseudotsuga menziesii","(p24707|sodcp_pinsy : 199.0) Superoxide dismutase [Cu-Zn], chloroplast (EC 1.15.1.1) (Fragment) - Pinus sylvestris (Scots pine) & (at2g28190 : 186.0) Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage.; copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc,  binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00047462-RA","No alias","Pseudotsuga menziesii","(at5g46390 : 111.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00051644-RA","No alias","Pseudotsuga menziesii","(at5g23330 : 188.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G08340.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00052323-RA","No alias","Pseudotsuga menziesii","(at5g21920 : 172.0) YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"Solyc01g005220","No alias","Solanum lycopersicum","MACPF domain-containing protein (AHRD V3.3 *** A0A0B2Q4M6_GLYSO)","protein_coding"
"Solyc01g103710","No alias","Solanum lycopersicum","NIFU-like protein 2 (AHRD V3.3 *** AT5G49940.1)","protein_coding"
"Solyc01g109040","No alias","Solanum lycopersicum","Cytochrome b6-f complex subunit 7 (AHRD V3.3 *** W9R158_9ROSA)","protein_coding"
"Solyc01g112060","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT4G35250.1)","protein_coding"
"Solyc02g064550","No alias","Solanum lycopersicum","Thioredoxin superfamily protein (AHRD V3.3 *** AT5G65840.1)","protein_coding"
"Solyc02g083810","No alias","Solanum lycopersicum","Ferredoxin--NADP reductase (AHRD V3.3 *** A0A0V0I3W8_SOLCH)","protein_coding"
"Solyc02g085950","No alias","Solanum lycopersicum","cell wall protein X77373","protein_coding"
"Solyc02g091560","No alias","Solanum lycopersicum","Serine hydroxymethyltransferase (AHRD V3.3 *** A0A0R4J3Y9_SOYBN)","protein_coding"
"Solyc02g092560","No alias","Solanum lycopersicum","Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A061DGZ5_THECC)","protein_coding"
"Solyc03g025410","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *-* AT4G23430.2)","protein_coding"
"Solyc03g034170","No alias","Solanum lycopersicum","acclimation of photosynthesis to environment (AHRD V3.3 *** AT5G38660.1)","protein_coding"
"Solyc03g059170","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g059180","No alias","Solanum lycopersicum","Rhodanese/Cell cycle control phosphatase superfamily protein (AHRD V3.3 *** AT3G59780.1)","protein_coding"
"Solyc03g111610","No alias","Solanum lycopersicum","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (AHRD V3.3 *** AT3G48420.1)","protein_coding"
"Solyc03g113340","No alias","Solanum lycopersicum","Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** AT1G74780.1)","protein_coding"
"Solyc03g117850","No alias","Solanum lycopersicum","Ribulose bisphosphate carboxylase/oxygenase activase (AHRD V3.3 *** A0A072VDJ3_MEDTR)","protein_coding"
"Solyc03g117950","No alias","Solanum lycopersicum","ATP-dependent Clp protease (AHRD V3.3 *** A0A059Q1P9_9POAL)","protein_coding"
"Solyc04g016230","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** M1DUF2_SOLTU)","protein_coding"
"Solyc04g074850","No alias","Solanum lycopersicum","ripening regulated protein DDTFR18","protein_coding"
"Solyc04g080430","No alias","Solanum lycopersicum","Cytosolic purine 5'-nucleotidase (AHRD V3.3 *** A0A0B0P914_GOSAR)","protein_coding"
"Solyc04g082250","No alias","Solanum lycopersicum","FtsH-like protein precursor","protein_coding"
"Solyc05g005490","No alias","Solanum lycopersicum","carbonic anhydrase","protein_coding"
"Solyc05g008110","No alias","Solanum lycopersicum","hydroxyproline-rich glycoprotein family protein (AHRD V3.3 --* AT1G23040.3)","protein_coding"
"Solyc06g034290","No alias","Solanum lycopersicum","Glycerol-3-phosphate transporter, putative (AHRD V3.3 *** B9R9S6_RICCO)","protein_coding"
"Solyc06g053260","No alias","Solanum lycopersicum","SAUR-like auxin-responsive family protein (AHRD V3.3 *** G7J880_MEDTR)","protein_coding"
"Solyc06g068220","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT1G52510.1)","protein_coding"
"Solyc06g073260","No alias","Solanum lycopersicum","chloroplast RNA binding protein (AHRD V3.3 *** AT1G09340.1)","protein_coding"
"Solyc07g056540","No alias","Solanum lycopersicum","glycolate oxidase X92888","protein_coding"
"Solyc07g066610","No alias","Solanum lycopersicum","phosphoglycerate kinase","protein_coding"
"Solyc08g076220","No alias","Solanum lycopersicum","Phosphoribulokinase (AHRD V3.3 *** K4CMY9_SOLLC)","protein_coding"
"Solyc08g081810","No alias","Solanum lycopersicum","Cation/H(+) antiporter (AHRD V3.3 *** A0A0K9NMD6_ZOSMR)","protein_coding"
"Solyc10g044520","No alias","Solanum lycopersicum","Ferredoxin (AHRD V3.3 *** A0A0K0PWX6_SOLLC)","protein_coding"
"Solyc10g054870","No alias","Solanum lycopersicum","triosephosphate isomerase (AHRD V3.3 *** AT2G21170.3)","protein_coding"
"Solyc11g008620","No alias","Solanum lycopersicum","Phosphoglycolate phosphatase (AHRD V3.3 *** A0A0V0I1W8_SOLCH)","protein_coding"
"Solyc11g010470","No alias","Solanum lycopersicum","14-3-3 protein 1","protein_coding"
"Solyc12g005630","No alias","Solanum lycopersicum","Cytochrome b6-f complex iron-sulfur subunit (AHRD V3.3 *** K4DBA1_SOLLC)","protein_coding"
"Solyc12g009600","No alias","Solanum lycopersicum","Thylakoid lumenal 16.5 kDa protein (AHRD V3.3 *** A0A061GNW6_THECC)","protein_coding"
"Sopen12g001560","No alias","Solanum pennellii","Cytochrome B6-F complex Fe-S subunit","protein_coding"