"sequence_id","alias","species","description","type"
"evm.model.tig00000025.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.235","No alias","Cyanophora paradoxa","(at1g27320 : 96.3) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 80.1) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.236","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.237","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.238","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.124","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000137.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000140.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000145.25","No alias","Cyanophora paradoxa","(at1g66340 : 80.9) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000227.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.10","No alias","Cyanophora paradoxa","(at3g53570 : 348.0) a  member of a CDC2-related kinase subfamily,  the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p29620|kc47_orysa : 92.4) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.79","No alias","Cyanophora paradoxa","(at1g17840 : 339.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin  transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 211.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000269.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000325.13","No alias","Cyanophora paradoxa","(q9m7m1|etr1_prupe : 163.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (at1g66340 : 161.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000334.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000339.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000339.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000350.17","No alias","Cyanophora paradoxa","(at1g36180 : 1013.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2026.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000396.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.76","No alias","Cyanophora paradoxa","(at5g35750 : 124.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 122.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000403.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000411.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000448.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000492.75","No alias","Cyanophora paradoxa","(at2g32850 : 212.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 3 (TAIR:AT5G08160.1); Has 91647 Blast hits to 90290 proteins in 2701 species: Archae - 81; Bacteria - 10784; Metazoa - 33910; Fungi - 10357; Plants - 19846; Viruses - 210; Other Eukaryotes - 16459 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000581.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000654.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.28","No alias","Cyanophora paradoxa","(at4g17550 : 80.9) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 16541 Blast hits to 16470 proteins in 1914 species: Archae - 148; Bacteria - 14105; Metazoa - 649; Fungi - 878; Plants - 215; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000743.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000792.71","No alias","Cyanophora paradoxa","(at1g27320 : 140.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 135.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.13","No alias","Cyanophora paradoxa","(at5g23630 : 453.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure.  MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000821.32","No alias","Cyanophora paradoxa","(at3g48770 : 126.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.18","No alias","Cyanophora paradoxa","(p37116|ncpr_phaau : 188.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 180.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000912.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.11","No alias","Cyanophora paradoxa","(at4g09020 : 389.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.8","No alias","Cyanophora paradoxa","(at5g11560 : 82.4) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000980.17","No alias","Cyanophora paradoxa","(at4g00900 : 285.0) Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.; ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 223.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001001.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.37","No alias","Cyanophora paradoxa","(at1g64790 : 87.8) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00001042.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001042.9","No alias","Cyanophora paradoxa","(at3g27870 : 165.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001065.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001073.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001234.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001292.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001335.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001343.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001388.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001443.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.103","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.105","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.273","No alias","Cyanophora paradoxa","No description available","protein_coding"
"evm.model.tig00020556.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.39","No alias","Cyanophora paradoxa","(at1g64780 : 282.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.45","No alias","Cyanophora paradoxa","(p51848|pdc2_orysa : 471.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (at5g01320 : 465.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.120","No alias","Cyanophora paradoxa","(at5g35750 : 107.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 97.8) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.121","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.139","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020660.47","No alias","Cyanophora paradoxa","(at2g28315 : 140.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 111.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.110","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.37","No alias","Cyanophora paradoxa","(at5g13520 : 281.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.58","No alias","Cyanophora paradoxa","(at5g35750 : 114.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 111.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020704.45","No alias","Cyanophora paradoxa","(at3g17712 : 92.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17740.1). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020710.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020723.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020824.7","No alias","Cyanophora paradoxa","(at5g10050 : 106.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020892.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.49","No alias","Cyanophora paradoxa","(at5g37500 : 160.0) Encodes a guard cell outward potassium channel.  Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 101.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.155","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.156","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020964.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020964.35","No alias","Cyanophora paradoxa","(at2g32950 : 280.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 276.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021012.17","No alias","Cyanophora paradoxa","(at4g39460 : 149.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (p29518|bt1_maize : 99.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021015.19","No alias","Cyanophora paradoxa","(at5g35750 : 145.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 121.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021036.109","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.64","No alias","Cyanophora paradoxa","(at4g21540 : 141.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.48","No alias","Cyanophora paradoxa","(at5g28290 : 199.0) Encodes AtNek3, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 3 (NEK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 124194 Blast hits to 122056 proteins in 3852 species: Archae - 107; Bacteria - 14304; Metazoa - 45560; Fungi - 12271; Plants - 30693; Viruses - 504; Other Eukaryotes - 20755 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 94.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021135.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.34","No alias","Cyanophora paradoxa","(p12628|maox_phavu : 528.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g11670 : 525.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.; NADP-malic enzyme 2 (NADP-ME2); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: response to cadmium ion, malate metabolic process, pentose-phosphate shunt, oxidative branch, protein homooligomerization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021221.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021244.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.25","No alias","Cyanophora paradoxa","(at3g08850 : 521.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs.  RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients.   Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021517.6","No alias","Cyanophora paradoxa","(at3g58760 : 81.3) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT4G18950.1); Has 165609 Blast hits to 134537 proteins in 4793 species: Archae - 244; Bacteria - 16399; Metazoa - 69591; Fungi - 13531; Plants - 33415; Viruses - 845; Other Eukaryotes - 31584 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021579.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.7","No alias","Cyanophora paradoxa","(q05001|ncpr_catro : 238.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 230.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021621.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"