"sequence_id","alias","species","description","type"
"109971","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"111465","No alias","Selaginella moellendorffii ","5\'-3\' exonuclease family protein","protein_coding"
"112419","No alias","Selaginella moellendorffii ","Transmembrane amino acid transporter family protein","protein_coding"
"112647","No alias","Selaginella moellendorffii ","Nodulin MtN3 family protein","protein_coding"
"121144","No alias","Selaginella moellendorffii ","Nucleotide/sugar transporter family protein","protein_coding"
"121537","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"134587","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"139237","No alias","Selaginella moellendorffii ","Transducin family protein / WD-40 repeat family protein","protein_coding"
"149863","No alias","Selaginella moellendorffii ","binding","protein_coding"
"150191","No alias","Selaginella moellendorffii ","RNA-dependent RNA polymerase 1","protein_coding"
"153186","No alias","Selaginella moellendorffii ","N2,N2-dimethylguanosine tRNA methyltransferase","protein_coding"
"173355","No alias","Selaginella moellendorffii ","MIRO-related GTP-ase 1","protein_coding"
"23058","No alias","Selaginella moellendorffii ","phosphatidylserine decarboxylase 1","protein_coding"
"233033","No alias","Selaginella moellendorffii ","acyl-CoA dehydrogenase-related","protein_coding"
"266556","No alias","Selaginella moellendorffii ","importin alpha isoform 1","protein_coding"
"268735","No alias","Selaginella moellendorffii ","cinnamyl-alcohol dehydrogenase","protein_coding"
"269627","No alias","Selaginella moellendorffii ","26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain","protein_coding"
"27061","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"270709","No alias","Selaginella moellendorffii ","MATE efflux family protein","protein_coding"
"31516","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"402249","No alias","Selaginella moellendorffii ","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"410000","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411471","No alias","Selaginella moellendorffii ","mediator subunit 8","protein_coding"
"412574","No alias","Selaginella moellendorffii ","RAP","protein_coding"
"412625","No alias","Selaginella moellendorffii ","calmodulin-related","protein_coding"
"414644","No alias","Selaginella moellendorffii ","inhibitor/interactor with cyclin-dependent kinase","protein_coding"
"418935","No alias","Selaginella moellendorffii ","WD-40 repeat family protein / notchless protein, putative","protein_coding"
"426119","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437591","No alias","Selaginella moellendorffii ","N-acetylglucosaminyl transferase component family protein / Gpi1 family protein","protein_coding"
"437713","No alias","Selaginella moellendorffii ","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"438614","No alias","Selaginella moellendorffii ","GYF domain-containing protein","protein_coding"
"439141","No alias","Selaginella moellendorffii ","GPI transamidase component PIG-S-related","protein_coding"
"440649","No alias","Selaginella moellendorffii ","pleiotropic drug resistance 1","protein_coding"
"441904","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"442281","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"443331","No alias","Selaginella moellendorffii ","aconitase 3","protein_coding"
"443682","No alias","Selaginella moellendorffii ","alpha 1,4-glycosyltransferase family protein","protein_coding"
"444016","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"449156","No alias","Selaginella moellendorffii ","global transcription factor group A2","protein_coding"
"52099","No alias","Selaginella moellendorffii ","cleavage and polyadenylation specificity factor 73 kDa subunit-II","protein_coding"
"63950","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"73379","No alias","Selaginella moellendorffii ","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"78287","No alias","Selaginella moellendorffii ","autoinhibited Ca2+ -ATPase, isoform 8","protein_coding"
"80448","No alias","Selaginella moellendorffii ","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"83843","No alias","Selaginella moellendorffii ","transferases, transferring glycosyl groups","protein_coding"
"89407","No alias","Selaginella moellendorffii ","HIS HF","protein_coding"
"97073","No alias","Selaginella moellendorffii ","DNA ligase 1","protein_coding"
"98426","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"99069","No alias","Selaginella moellendorffii ","Tubulin/FtsZ family protein","protein_coding"
"A4A49_02281","No alias","Nicotiana attenuata","phosphoribosylamine--glycine ligase, chloroplastic","protein_coding"
"A4A49_28469","No alias","Nicotiana attenuata","phosphoribosylamine--glycine ligase, chloroplastic","protein_coding"
"AC152495.1_FG012","No alias","Zea mays","endomembrane-type CA-ATPase 4","protein_coding"
"AC225193.3_FG003","No alias","Zea mays","AT hook motif DNA-binding family protein","protein_coding"
"AC233885.1_FG001","No alias","Zea mays","Protein of unknown function, DUF593","protein_coding"
"At1g02150","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g02150 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS6]","protein_coding"
"At1g04870","No alias","Arabidopsis thaliana","PRMT10 [Source:UniProtKB/TrEMBL;Acc:A0A178WKU5]","protein_coding"
"At1g07030","No alias","Arabidopsis thaliana","At1g07030 [Source:UniProtKB/TrEMBL;Acc:Q8L6Z2]","protein_coding"
"At1g09830","No alias","Arabidopsis thaliana","Phosphoribosylamine--glycine ligase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52420]","protein_coding"
"At1g14710","No alias","Arabidopsis thaliana","Hydroxyproline-rich glycoprotein family protein [Source:UniProtKB/TrEMBL;Acc:F4HWB0]","protein_coding"
"At1g19520","No alias","Arabidopsis thaliana","pentatricopeptide (PPR) repeat-containing protein [Source:TAIR;Acc:AT1G19520]","protein_coding"
"At1g20300","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g20300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LN22]","protein_coding"
"At1g22660","No alias","Arabidopsis thaliana","Polynucleotide adenylyltransferase family protein [Source:TAIR;Acc:AT1G22660]","protein_coding"
"At1g25350","No alias","Arabidopsis thaliana","Glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS [Source:UniProtKB/TrEMBL;Acc:F4ICG2]","protein_coding"
"At1g33940","No alias","Arabidopsis thaliana","Serine/Threonine-kinase ULK4-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C8V1]","protein_coding"
"At1g50450","No alias","Arabidopsis thaliana","At1g50450/F11F12_20 [Source:UniProtKB/TrEMBL;Acc:Q94BZ0]","protein_coding"
"At1g50920","No alias","Arabidopsis thaliana","Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6I8]","protein_coding"
"At1g52670","No alias","Arabidopsis thaliana","Is a member of the PF [Source:UniProtKB/TrEMBL;Acc:Q8VZ68]","protein_coding"
"At1g52730","No alias","Arabidopsis thaliana","AT1G52730 protein [Source:UniProtKB/TrEMBL;Acc:Q9SSS7]","protein_coding"
"At1g53240","No alias","Arabidopsis thaliana","Malate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP06]","protein_coding"
"At1g54270","No alias","Arabidopsis thaliana","eIF4A-2 [Source:UniProtKB/TrEMBL;Acc:A0A178W4U1]","protein_coding"
"At1g55820","No alias","Arabidopsis thaliana","GBF-interacting protein 1-like [Source:UniProtKB/Swiss-Prot;Acc:A4FVR1]","protein_coding"
"At1g55890","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g55890, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LG23]","protein_coding"
"At1g57770","No alias","Arabidopsis thaliana","FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]","protein_coding"
"At1g71920","No alias","Arabidopsis thaliana","Histidinol-phosphate aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI07]","protein_coding"
"At1g72730","No alias","Arabidopsis thaliana","Eukaryotic initiation factor 4A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI7]","protein_coding"
"At1g76810","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 2 (eIF-2) family protein [Source:UniProtKB/TrEMBL;Acc:F4I420]","protein_coding"
"At1g79920","No alias","Arabidopsis thaliana","Heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT1G79920]","protein_coding"
"At1g80750","No alias","Arabidopsis thaliana","60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]","protein_coding"
"At2g05760","No alias","Arabidopsis thaliana","Nucleobase-ascorbate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHZ3]","protein_coding"
"At2g31660","No alias","Arabidopsis thaliana","Importin beta-like SAD2 [Source:UniProtKB/Swiss-Prot;Acc:F4IRR2]","protein_coding"
"At2g32500","No alias","Arabidopsis thaliana","At2g32500 [Source:UniProtKB/TrEMBL;Acc:Q67XD6]","protein_coding"
"At2g38730","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]","protein_coding"
"At2g41650","No alias","Arabidopsis thaliana","At2g41650 [Source:UniProtKB/TrEMBL;Acc:O22226]","protein_coding"
"At3g03950","No alias","Arabidopsis thaliana","AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]","protein_coding"
"At3g04820","No alias","Arabidopsis thaliana","Pseudouridine synthase family protein [Source:UniProtKB/TrEMBL;Acc:Q5XVC2]","protein_coding"
"At3g11830","No alias","Arabidopsis thaliana","T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]","protein_coding"
"At3g16480","No alias","Arabidopsis thaliana","Probable mitochondrial-processing peptidase subunit alpha-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04308]","protein_coding"
"At3g18190","No alias","Arabidopsis thaliana","T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9LV21]","protein_coding"
"At3g18240","No alias","Arabidopsis thaliana","AT3G18240 protein [Source:UniProtKB/TrEMBL;Acc:Q9LJQ6]","protein_coding"
"At3g20000","No alias","Arabidopsis thaliana","TOM40 [Source:UniProtKB/TrEMBL;Acc:A0A178V9B1]","protein_coding"
"At3g20740","No alias","Arabidopsis thaliana","Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Source:UniProtKB/Swiss-Prot;Acc:Q9LT47]","protein_coding"
"At3g25860","No alias","Arabidopsis thaliana","Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI8]","protein_coding"
"At3g42950","No alias","Arabidopsis thaliana","AT3g42950/F18P9_110 [Source:UniProtKB/TrEMBL;Acc:Q9M1L0]","protein_coding"
"At3g55200","No alias","Arabidopsis thaliana","Spliceosome-associated protein 130 B [Source:UniProtKB/Swiss-Prot;Acc:P0DKL6]","protein_coding"
"At3g57610","No alias","Arabidopsis thaliana","Adenylosuccinate synthetase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96529]","protein_coding"
"At3g59630","No alias","Arabidopsis thaliana","2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]","protein_coding"
"At3g60770","No alias","Arabidopsis thaliana","40S ribosomal protein S13-1 [Source:UniProtKB/Swiss-Prot;Acc:P59223]","protein_coding"
"At3g60880","No alias","Arabidopsis thaliana","4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX6]","protein_coding"
"At3g61240","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2E0]","protein_coding"
"At3g61650","No alias","Arabidopsis thaliana","Tubulin gamma-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P38557]","protein_coding"
"At4g03180","No alias","Arabidopsis thaliana","At4g03180 [Source:UniProtKB/TrEMBL;Acc:Q9ZR13]","protein_coding"
"At4g11160","No alias","Arabidopsis thaliana","At4g11160 [Source:UniProtKB/TrEMBL;Acc:Q67ZW2]","protein_coding"
"At4g11380","No alias","Arabidopsis thaliana","Beta-adaptin-like protein [Source:UniProtKB/TrEMBL;Acc:F4JNZ8]","protein_coding"
"At4g26300","No alias","Arabidopsis thaliana","Arginyl-tRNA synthetase, class Ic [Source:TAIR;Acc:AT4G26300]","protein_coding"
"At4g27520","No alias","Arabidopsis thaliana","Early nodulin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T076]","protein_coding"
"At4g37510","No alias","Arabidopsis thaliana","Ribonuclease III domain-containing protein RNC1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZV0]","protein_coding"
"At5g04900","No alias","Arabidopsis thaliana","Chlorophyll(ide) b reductase NOL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEU3]","protein_coding"
"At5g10360","No alias","Arabidopsis thaliana","40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:A0A178USM6]","protein_coding"
"At5g16270","No alias","Arabidopsis thaliana","Sister chromatid cohesion 1 protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1Y0]","protein_coding"
"At5g18420","No alias","Arabidopsis thaliana","At5g18420 [Source:UniProtKB/TrEMBL;Acc:B4F7N8]","protein_coding"
"At5g19320","No alias","Arabidopsis thaliana","RANGAP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQD1]","protein_coding"
"At5g19900","No alias","Arabidopsis thaliana","AT5G19900 protein [Source:UniProtKB/TrEMBL;Acc:B9DF92]","protein_coding"
"At5g23420","No alias","Arabidopsis thaliana","High mobility group B protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDF9]","protein_coding"
"At5g23890","No alias","Arabidopsis thaliana","GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]","protein_coding"
"At5g25780","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/TrEMBL;Acc:Q8GUM1]","protein_coding"
"At5g27620","No alias","Arabidopsis thaliana","cyclin H;1 [Source:TAIR;Acc:AT5G27620]","protein_coding"
"At5g37890","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase SINA-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD7]","protein_coding"
"At5g38830","No alias","Arabidopsis thaliana","Cysteine--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:B3LFA4]","protein_coding"
"At5g42740","No alias","Arabidopsis thaliana","Glucose-6-phosphate isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UPP5]","protein_coding"
"At5g43990","No alias","Arabidopsis thaliana","SET-domain containing protein lysine methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4K7E3]","protein_coding"
"At5g57590","No alias","Arabidopsis thaliana","Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:B0F481]","protein_coding"
"At5g63110","No alias","Arabidopsis thaliana","Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:B1PXB9]","protein_coding"
"At5g64960","No alias","Arabidopsis thaliana","Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]","protein_coding"
"At5g66760","No alias","Arabidopsis thaliana","Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UAN3]","protein_coding"
"Bradi1g02870","No alias","Brachypodium distachyon","Clathrin, heavy chain","protein_coding"
"Bradi1g02990","No alias","Brachypodium distachyon","phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)","protein_coding"
"Bradi1g08810","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g08880","No alias","Brachypodium distachyon","HXXXD-type acyl-transferase family protein","protein_coding"
"Bradi1g13777","No alias","Brachypodium distachyon","Transketolase family protein","protein_coding"
"Bradi1g19940","No alias","Brachypodium distachyon","protein arginine methyltransferase 3","protein_coding"
"Bradi1g26090","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi1g31460","No alias","Brachypodium distachyon","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"Bradi1g31710","No alias","Brachypodium distachyon","GTP-binding family protein","protein_coding"
"Bradi1g32287","No alias","Brachypodium distachyon","Cysteine proteinases superfamily protein","protein_coding"
"Bradi1g33010","No alias","Brachypodium distachyon","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Bradi1g36880","No alias","Brachypodium distachyon","Ribosomal protein L19 family protein","protein_coding"
"Bradi1g48080","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi1g61610","No alias","Brachypodium distachyon","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Bradi1g62430","No alias","Brachypodium distachyon","NOP56-like pre RNA processing ribonucleoprotein","protein_coding"
"Bradi1g63010","No alias","Brachypodium distachyon","Ribosomal protein L19e family protein","protein_coding"
"Bradi1g70017","No alias","Brachypodium distachyon","Mitochondrial substrate carrier family protein","protein_coding"
"Bradi1g71640","No alias","Brachypodium distachyon","cyclophilin 59","protein_coding"
"Bradi1g72735","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g75080","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi1g75460","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g75980","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi2g02870","No alias","Brachypodium distachyon","Mitochondrial glycoprotein family protein","protein_coding"
"Bradi2g05190","No alias","Brachypodium distachyon","FRIGIDA-like protein","protein_coding"
"Bradi2g05290","No alias","Brachypodium distachyon","cytochrome P450, family 96, subfamily A, polypeptide 5","protein_coding"
"Bradi2g05970","No alias","Brachypodium distachyon","Alkaline-phosphatase-like family protein","protein_coding"
"Bradi2g11107","No alias","Brachypodium distachyon","Flavin containing amine oxidoreductase family","protein_coding"
"Bradi2g16170","No alias","Brachypodium distachyon","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Bradi2g18860","No alias","Brachypodium distachyon","Hyaluronan / mRNA binding family","protein_coding"
"Bradi2g20230","No alias","Brachypodium distachyon","Radical SAM superfamily protein","protein_coding"
"Bradi2g20250","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi2g27790","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g41480","No alias","Brachypodium distachyon","carbamoyl phosphate synthetase B","protein_coding"
"Bradi2g48279","No alias","Brachypodium distachyon","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"Bradi2g57630","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi2g57827","No alias","Brachypodium distachyon","recA DNA recombination family protein","protein_coding"
"Bradi3g00507","No alias","Brachypodium distachyon","nuclear RNA polymerase C1","protein_coding"
"Bradi3g02190","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Bradi3g07090","No alias","Brachypodium distachyon","outer envelope protein of 80 kDa","protein_coding"
"Bradi3g07200","No alias","Brachypodium distachyon","Undecaprenyl pyrophosphate synthetase family protein","protein_coding"
"Bradi3g20530","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi3g28270","No alias","Brachypodium distachyon","mitochondrial ribosomal protein L11","protein_coding"
"Bradi3g46470","No alias","Brachypodium distachyon","RNA-binding protein 47C","protein_coding"
"Bradi3g48010","No alias","Brachypodium distachyon","Mitochondrial transcription termination factor family protein","protein_coding"
"Bradi3g48860","No alias","Brachypodium distachyon","polyribonucleotide nucleotidyltransferase, putative","protein_coding"
"Bradi3g57450","No alias","Brachypodium distachyon","mitochondrial HSO70 2","protein_coding"
"Bradi4g02100","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi4g21820","No alias","Brachypodium distachyon","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Bradi4g22080","No alias","Brachypodium distachyon","Cam interacting protein 111","protein_coding"
"Bradi4g38090","No alias","Brachypodium distachyon","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Bradi4g40830","No alias","Brachypodium distachyon","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein","protein_coding"
"Bradi4g41060","No alias","Brachypodium distachyon","DNAJ heat shock family protein","protein_coding"
"Bradi5g09300","No alias","Brachypodium distachyon","Tubulin/FtsZ family protein","protein_coding"
"Bradi5g09500","No alias","Brachypodium distachyon","ribosomal protein L5 B","protein_coding"
"Bradi5g10980","No alias","Brachypodium distachyon","FK506 BINDING PROTEIN 53","protein_coding"
"Bradi5g11740","No alias","Brachypodium distachyon","phosphate transporter 3;1","protein_coding"
"Bradi5g13967","No alias","Brachypodium distachyon","Eukaryotic rpb5 RNA polymerase subunit family protein","protein_coding"
"Bradi5g15797","No alias","Brachypodium distachyon","wall associated kinase 3","protein_coding"
"Bradi5g20040","No alias","Brachypodium distachyon","Transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi5g26820","No alias","Brachypodium distachyon","K+ efflux antiporter 2","protein_coding"
"Brara.A00605.1","No alias","Brassica rapa","component *(eS6) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.A00625.1","No alias","Brassica rapa","component *(bL28m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.A00790.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01399.1","No alias","Brassica rapa","component *(FtsHi) of protein translocation ATPase motor complex","protein_coding"
"Brara.A02019.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.A02187.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02449.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02588.1","No alias","Brassica rapa","dihydroxy-acid dehydratase & dihydroxy-acid dehydratase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.A03273.1","No alias","Brassica rapa","RecA-activity modulator *(RecX)","protein_coding"
"Brara.A03704.1","No alias","Brassica rapa","component *(eL18) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.A03843.1","No alias","Brassica rapa","nucleocytoplasmic export karyopherin *(XPO1) & export karyopherin *(XPO1) of RNA-induced silencing complex (RISC) export","protein_coding"
"Brara.B00859.1","No alias","Brassica rapa","GTPase *(Ran)","protein_coding"
"Brara.B01332.1","No alias","Brassica rapa","component *(FtsZ1) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Brara.B01509.1","No alias","Brassica rapa","component *(CPSF160/Yhh1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex","protein_coding"
"Brara.B01721.1","No alias","Brassica rapa","component *(uL22) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.B02117.1","No alias","Brassica rapa","RNA editing factor *(ORRM3)","protein_coding"
"Brara.B02413.1","No alias","Brassica rapa","3-isopropylmalate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.B02686.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.B02733.1","No alias","Brassica rapa","component *(uL6) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.B02844.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02884.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03878.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03983.1","No alias","Brassica rapa","Kinesin-14-type motor protein","protein_coding"
"Brara.C00178.1","No alias","Brassica rapa","component *(eS17) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C01470.1","No alias","Brassica rapa","component *(uS10) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C01612.1","No alias","Brassica rapa","component *(uS3) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C01629.1","No alias","Brassica rapa","regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity","protein_coding"
"Brara.C01696.1","No alias","Brassica rapa","chaperone *(Hsp60)","protein_coding"
"Brara.C01744.1","No alias","Brassica rapa","component *(eL20) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.C02379.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding"
"Brara.C02791.1","No alias","Brassica rapa","ribosome biogenesis GTPase *(RgbA)","protein_coding"
"Brara.C02834.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03111.1","No alias","Brassica rapa","component *(eL18) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.C04015.1","No alias","Brassica rapa","endoribonuclease *(RNase Z)","protein_coding"
"Brara.C04231.1","No alias","Brassica rapa","component *(eS19) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C04644.1","No alias","Brassica rapa","dihydroorotase *(PYR4)","protein_coding"
"Brara.D00074.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.D00230.1","No alias","Brassica rapa","ketol-acid reductoisomerase & ketol-acid reductoisomerase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.D00543.1","No alias","Brassica rapa","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"Brara.D00556.1","No alias","Brassica rapa","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.D00861.1","No alias","Brassica rapa","protease *(Deg)","protein_coding"
"Brara.D01039.1","No alias","Brassica rapa","protease *(Deg)","protein_coding"
"Brara.D01796.1","No alias","Brassica rapa","E1 ubiquitin-activating enzyme","protein_coding"
"Brara.D02272.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02287.1","No alias","Brassica rapa","component *(eL36) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E00496.1","No alias","Brassica rapa","component *(uS15) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E01323.1","No alias","Brassica rapa","RNA editing factor *(OTP81)","protein_coding"
"Brara.E01889.1","No alias","Brassica rapa","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Brara.E02181.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02204.1","No alias","Brassica rapa","channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Brara.E02231.1","No alias","Brassica rapa","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.E02321.1","No alias","Brassica rapa","component *(eL30) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E02368.1","No alias","Brassica rapa","component *(mS35) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.E02406.1","No alias","Brassica rapa","co-chaperone *(Hsp40)","protein_coding"
"Brara.E02892.1","No alias","Brassica rapa","component *(uS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E03250.1","No alias","Brassica rapa","histone methylase *(PRMT4)","protein_coding"
"Brara.E03419.1","No alias","Brassica rapa","component *(eS1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E03449.1","No alias","Brassica rapa","component *(uL14) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.E03459.1","No alias","Brassica rapa","component *(uS9) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.F00642.1","No alias","Brassica rapa","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Brara.F00829.1","No alias","Brassica rapa","glutamyl-tRNA reductase *(HEMA) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.F01715.1","No alias","Brassica rapa","EC_1.3 oxidoreductase acting on CH-CH group of donor & L-galactono-1,4-lactone dehydrogenase *(GLDH)","protein_coding"
"Brara.F01758.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01839.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02127.1","No alias","Brassica rapa","regulatory protein *(GCD1) involved in gametogenesis","protein_coding"
"Brara.F02227.1","No alias","Brassica rapa","adenylate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F02585.1","No alias","Brassica rapa","regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex","protein_coding"
"Brara.F02872.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03202.1","No alias","Brassica rapa","component *(eIF3i) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Brara.F03539.1","No alias","Brassica rapa","phosphoinositide transfer protein *(SFH)","protein_coding"
"Brara.G00137.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00278.1","No alias","Brassica rapa","homoserine kinase","protein_coding"
"Brara.G00691.1","No alias","Brassica rapa","chaperone HSCA of mitochondrial ISC system transfer phase & chaperone component *(mtHSP70) of inner mitochondrion membrane TIM translocation system & chaperone *(mtHsc70))","protein_coding"
"Brara.G00772.1","No alias","Brassica rapa","R-loop reader protein *(ALBA1/2)","protein_coding"
"Brara.G01079.1","No alias","Brassica rapa","subunit alpha of NAC ribosome-associated chaperone complex","protein_coding"
"Brara.G01538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02721.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02907.1","No alias","Brassica rapa","component *(uL16) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.H00602.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01123.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01960.1","No alias","Brassica rapa","R-loop reader protein *(ALBA1/2)","protein_coding"
"Brara.H02557.1","No alias","Brassica rapa","aspartate-semialdehyde dehydrogenase","protein_coding"
"Brara.H02794.1","No alias","Brassica rapa","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Brara.H02804.1","No alias","Brassica rapa","component *(eL21) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.H02899.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.H02954.1","No alias","Brassica rapa","NSUN-group-IV rRNA methyltransferase","protein_coding"
"Brara.I00454.1","No alias","Brassica rapa","component *(eL18) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I01542.1","No alias","Brassica rapa","component *(NRPC3) of RNA polymerase III complex & component *(NRPA3) of RNA polymerase I complex","protein_coding"
"Brara.I03140.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03566.1","No alias","Brassica rapa","component *(eL40) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I03647.1","No alias","Brassica rapa","EC_5.1 racemase or epimerase & diaminopimelate epimerase","protein_coding"
"Brara.I03670.1","No alias","Brassica rapa","component *(eS21) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I03706.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding"
"Brara.I03766.1","No alias","Brassica rapa","aminoimidazole RN synthetase *(PUR5)","protein_coding"
"Brara.I03824.1","No alias","Brassica rapa","component *(eL33) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I04370.1","No alias","Brassica rapa","Ran-activating protein of nucleocytoplasmic transport","protein_coding"
"Brara.I05231.1","No alias","Brassica rapa","biotin carboxylase component of polymeric acetyl-CoA carboxylase complex & EC_6.4 ligase forming carbon-carbon bond","protein_coding"
"Brara.I05540.1","No alias","Brassica rapa","component *(TRM82) of TRM8-TRM82 tRNA guanosine-methyltransferase complex","protein_coding"
"Brara.J00498.1","No alias","Brassica rapa","component *(bS18m) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.J00977.1","No alias","Brassica rapa","component *(FtsZ1) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Brara.J01330.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01356.1","No alias","Brassica rapa","histone *(H2A)","protein_coding"
"Brara.J01445.1","No alias","Brassica rapa","histone *(H2B)","protein_coding"
"Brara.J01654.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01899.1","No alias","Brassica rapa","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.J02720.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase) & M18-class aspartyl aminopeptidase *(DAP)","protein_coding"
"Brara.K01314.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01326.1","No alias","Brassica rapa","component *(uL2) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Cre02.g078912","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g082250","No alias","Chlamydomonas reinhardtii","homoserine kinase","protein_coding"
"Cre02.g090150","No alias","Chlamydomonas reinhardtii","homolog of bacterial PANC","protein_coding"
"Cre02.g109800","No alias","Chlamydomonas reinhardtii","FAD-dependent oxidoreductase family protein","protein_coding"
"Cre02.g144750","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding"
"Cre03.g148000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g152500","No alias","Chlamydomonas reinhardtii","SET domain group 37","protein_coding"
"Cre03.g182450","No alias","Chlamydomonas reinhardtii","Amino acid dehydrogenase family protein","protein_coding"
"Cre03.g184400","No alias","Chlamydomonas reinhardtii","nudix hydrolase  1","protein_coding"
"Cre03.g186000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g203800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g210401","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre03.g213537","No alias","Chlamydomonas reinhardtii","basic transcription factor 3","protein_coding"
"Cre04.g213761","No alias","Chlamydomonas reinhardtii","Thioesterase superfamily protein","protein_coding"
"Cre04.g220200","No alias","Chlamydomonas reinhardtii","K+ efflux antiporter 2","protein_coding"
"Cre05.g240850","No alias","Chlamydomonas reinhardtii","thiaminC","protein_coding"
"Cre06.g285750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g307400","No alias","Chlamydomonas reinhardtii","DNAse I-like superfamily protein","protein_coding"
"Cre07.g346450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g398586","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g430300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g444500","No alias","Chlamydomonas reinhardtii","sulfurtransferase protein 16","protein_coding"
"Cre10.g456400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467673","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g476950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g487150","No alias","Chlamydomonas reinhardtii","Phosphoglycerate mutase family protein","protein_coding"
"Cre12.g502950","No alias","Chlamydomonas reinhardtii","RNA-binding S4 domain-containing protein","protein_coding"
"Cre12.g550700","No alias","Chlamydomonas reinhardtii","Formyl transferase","protein_coding"
"Cre13.g578050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g584850","No alias","Chlamydomonas reinhardtii","glutathione S-transferase PHI 10","protein_coding"
"Cre14.g616589","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g641875","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre16.g654000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre16.g663150","No alias","Chlamydomonas reinhardtii","sulfurtransferase 18","protein_coding"
"Cre16.g670950","No alias","Chlamydomonas reinhardtii","Cytochrome c","protein_coding"
"Cre16.g683750","No alias","Chlamydomonas reinhardtii","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"Cre17.g704150","No alias","Chlamydomonas reinhardtii","PLC-like phosphodiesterases superfamily protein","protein_coding"
"Cre17.g710800","No alias","Chlamydomonas reinhardtii","NFU domain protein 1","protein_coding"
"Cre17.g723550","No alias","Chlamydomonas reinhardtii","myo-inositol monophosphatase like 2","protein_coding"
"Cre17.g731600","No alias","Chlamydomonas reinhardtii","1-phosphatidylinositol-4-phosphate 5-kinase 3","protein_coding"
"Cre18.g749497","No alias","Chlamydomonas reinhardtii","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Cre18.g749647","No alias","Chlamydomonas reinhardtii","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Cre21.g752947","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2045.10","No alias","Porphyridium purpureum","(at2g43560 : 93.2) FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2050.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2059.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2070.29","No alias","Porphyridium purpureum","(at1g54310 : 249.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine-dependent methyltransferase (InterPro:IPR019614), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2076.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2093.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2095.3","No alias","Porphyridium purpureum","(at1g09830 : 436.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 333.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2100.4","No alias","Porphyridium purpureum","(at3g27180 : 177.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4717 Blast hits to 4707 proteins in 1568 species: Archae - 39; Bacteria - 4296; Metazoa - 92; Fungi - 26; Plants - 68; Viruses - 1; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2122.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2132.1","No alias","Porphyridium purpureum",""(at3g19980 : 495.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A.  It can associate with phytochromes A and B in vitro.  Mutant plants display an accelerated flowering phenotype.; ""flower-specific, phytochrome-associated protein phosphatase 3"" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgh7|pp2a_tobac : 377.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 990.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2153.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2178.1","No alias","Porphyridium purpureum","(at3g47450 : 81.3) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2194.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2319.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2508.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3395.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3407.1","No alias","Porphyridium purpureum","(at5g36230 : 175.0) ARM repeat superfamily protein; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: regulation of translational initiation; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G65220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68872 : 124.0) no description available & (gnl|cdd|39774 : 82.9) no description available & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3425.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3436.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3468.6","No alias","Porphyridium purpureum","(at5g27930 : 128.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G05640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3495.10","No alias","Porphyridium purpureum","(at5g06060 : 125.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q949m3|fabg3_brana : 122.0) 3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 3) - Brassica napus (Rape) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3699.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3825.1","No alias","Porphyridium purpureum","(at5g13650 : 241.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (o23755|ef2_betvu : 108.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4416.13","No alias","Porphyridium purpureum","(at3g04710 : 97.1) ankyrin repeat family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Tetratricopeptide-like helical (InterPro:IPR011990), Ankyrin repeat-containing domain (InterPro:IPR020683), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_4422.1","No alias","Porphyridium purpureum","(at2g44520 : 172.0) cytochrome c oxidase 10 (COX10); FUNCTIONS IN: protoheme IX farnesyltransferase activity, prenyltransferase activity; INVOLVED IN: heme o biosynthetic process, heme biosynthetic process; LOCATED IN: integral to membrane, mitochondrial membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protohaem IX farnesyltransferase, mitochondria (InterPro:IPR016315), Protohaem IX farnesyltransferase (InterPro:IPR006369), UbiA prenyltransferase (InterPro:IPR000537); Has 7990 Blast hits to 7990 proteins in 1845 species: Archae - 160; Bacteria - 4430; Metazoa - 177; Fungi - 179; Plants - 66; Viruses - 0; Other Eukaryotes - 2978 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4435.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4454.4","No alias","Porphyridium purpureum","(at5g48840 : 145.0) Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.; homolog of bacterial PANC (PANC); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pantoate-beta-alanine ligase (InterPro:IPR003721); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24035|panc_lotja : 144.0) Pantoate--beta-alanine ligase precursor (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) - Lotus japonicus & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_468.12","No alias","Porphyridium purpureum","(at5g26742 : 306.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 305.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_481.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_483.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_490.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_529.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_537.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_782.1","No alias","Porphyridium purpureum","(at3g47450 : 109.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 102.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_834.1","No alias","Porphyridium purpureum","(at2g44270 : 184.0) Encodes ROL5, a repressor of lrx1 mutants that develop aberrant root hairs.  ROL5 is a homolog of yeast Ncs6p that affects TOR signaling.  The target of rapamycin (TOR) pathway is a major regulator of cell growth in eukaryotes, and inhibition of this pathway by rapamycin reduces cell growth. ROL5 might function as a mitochondrial component of the TOR pathway that influences the plant's response to ROS (reactive oxygen species).; repressor of lrx1 (ROL5); FUNCTIONS IN: ATP binding; INVOLVED IN: response to reactive oxygen species, regulation of plant-type cell wall organization or biogenesis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), PP-loop (InterPro:IPR011063), 2-thiocytidine tRNA biosynthesis protein, TtcA (InterPro:IPR012089); BEST Arabidopsis thaliana protein match is: 2-thiocytidine tRNA biosynthesis protein, TtcA (TAIR:AT1G76170.1). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000037.25","No alias","Cyanophora paradoxa","(at1g30820 : 617.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT2G34890.1); Has 10946 Blast hits to 10907 proteins in 2949 species: Archae - 238; Bacteria - 5576; Metazoa - 256; Fungi - 232; Plants - 177; Viruses - 0; Other Eukaryotes - 4467 (source: NCBI BLink). & (reliability: 1234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.123","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.89","No alias","Cyanophora paradoxa","(at1g15440 : 99.4) periodic tryptophan protein 2 (PWP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp12 (InterPro:IPR007148), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.98","No alias","Cyanophora paradoxa","(at5g04590 : 536.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q42997|nir_orysa : 99.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Oryza sativa (Rice) & (reliability: 1072.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.115","No alias","Cyanophora paradoxa","(q42808|tbp_soybn : 117.0) TATA-box-binding protein (TATA-box factor) (TATA-binding factor) (TATA sequence-binding protein) (TBP) (Transcription initiation factor TFIID TBP subunit) - Glycine max (Soybean) & (at3g13445 : 115.0) TBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex; TATA binding protein 1 (TBP1); FUNCTIONS IN: RNA polymerase II transcription factor activity, binding, DNA binding; INVOLVED IN: transcription initiation from RNA polymerase II promoter, regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal (InterPro:IPR012294); BEST Arabidopsis thaliana protein match is: TATA binding protein 2 (TAIR:AT1G55520.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.143","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.252","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.176","No alias","Cyanophora paradoxa","(at3g57560 : 211.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.75","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000194.21","No alias","Cyanophora paradoxa","(at1g09830 : 392.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 255.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.52","No alias","Cyanophora paradoxa","(at1g50300 : 84.0) TBP-associated factor 15 (TAF15); FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: TBP-associated factor 15B (TAIR:AT5G58470.2); Has 11021 Blast hits to 6677 proteins in 384 species: Archae - 8; Bacteria - 254; Metazoa - 5533; Fungi - 1360; Plants - 1875; Viruses - 14; Other Eukaryotes - 1977 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.115","No alias","Cyanophora paradoxa","(at1g80670 : 424.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (reliability: 848.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000217.16","No alias","Cyanophora paradoxa","(at4g25730 : 263.0) FtsJ-like methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, rRNA processing, rRNA methylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spb1, C-terminal (InterPro:IPR012920), Ribosomal RNA methyltransferase J (InterPro:IPR015507), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G01230.1); Has 30028 Blast hits to 21157 proteins in 1975 species: Archae - 200; Bacteria - 7297; Metazoa - 8731; Fungi - 3085; Plants - 939; Viruses - 236; Other Eukaryotes - 9540 (source: NCBI BLink). & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.139","No alias","Cyanophora paradoxa","(at3g21110 : 313.0) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.; purin 7 (PUR7); FUNCTIONS IN: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity; INVOLVED IN: response to auxin stimulus, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAICAR synthetase, conserved site (InterPro:IPR018236), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), SAICAR synthetase (InterPro:IPR001636); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.147","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000319.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.44","No alias","Cyanophora paradoxa","(at1g07040 : 254.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.46","No alias","Cyanophora paradoxa","(at3g08730 : 309.0) Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress.  The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.; protein-serine kinase 1 (PK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 134224 Blast hits to 132007 proteins in 4588 species: Archae - 200; Bacteria - 15979; Metazoa - 48799; Fungi - 13454; Plants - 32927; Viruses - 586; Other Eukaryotes - 22279 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 158.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.65","No alias","Cyanophora paradoxa","(at4g25340 : 88.6) Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression.; FK506 BINDING PROTEIN 53 (FKBP53); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G05420.1). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000391.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.24","No alias","Cyanophora paradoxa","(p28644|roc1_spiol : 96.3) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (at5g50250 : 87.0) Encodes a RNA binding protein.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).  Supports editing of specific CP31A-dependent sites.; chloroplast RNA-binding protein 31B (CP31B); FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: RNA modification, innate immune response; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: 31-kDa RNA binding protein (TAIR:AT4G24770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000478.23","No alias","Cyanophora paradoxa","(at1g06720 : 305.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 8329 Blast hits to 5822 proteins in 470 species: Archae - 49; Bacteria - 737; Metazoa - 2493; Fungi - 1253; Plants - 549; Viruses - 77; Other Eukaryotes - 3171 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000545.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.33","No alias","Cyanophora paradoxa","(at3g51800 : 295.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.26","No alias","Cyanophora paradoxa","(at4g35740 : 207.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.61","No alias","Cyanophora paradoxa","(at3g16810 : 157.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.67","No alias","Cyanophora paradoxa","(at4g28450 : 462.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; nucleotide binding;protein binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Sof1-like protein (InterPro:IPR007287), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38; Bacteria - 5948; Metazoa - 14528; Fungi - 7710; Plants - 4379; Viruses - 0; Other Eukaryotes - 4734 (source: NCBI BLink). & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000622.13","No alias","Cyanophora paradoxa","(at5g08570 : 456.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (q42806|kpyc_soybn : 452.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000632.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000754.17","No alias","Cyanophora paradoxa","(at1g31220 : 90.1) N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide; Formyl transferase; FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, phosphoribosylglycinamide formyltransferase activity, formyltetrahydrofolate deformylase activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide formyltransferase, active site (InterPro:IPR001555), Phosphoribosylglycinamide formyltransferase (InterPro:IPR004607), Formyl transferase, N-terminal (InterPro:IPR002376); BEST Arabidopsis thaliana protein match is: Formyl transferase (TAIR:AT4G17360.1); Has 13846 Blast hits to 13846 proteins in 2648 species: Archae - 117; Bacteria - 9929; Metazoa - 318; Fungi - 202; Plants - 129; Viruses - 3; Other Eukaryotes - 3148 (source: NCBI BLink). & (p52423|pur3_vigun : 86.3) Phosphoribosylglycinamide formyltransferase, chloroplast precursor (EC 2.1.2.2) (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) - Vigna unguiculata (Cowpea) & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000769.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.39","No alias","Cyanophora paradoxa","(at1g17690 : 182.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000829.16","No alias","Cyanophora paradoxa","(at1g31660 : 299.0) CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000851.17","No alias","Cyanophora paradoxa","(at5g13280 : 372.0) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety  of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH).; aspartate kinase 1 (AK-LYS1); FUNCTIONS IN: aspartate kinase activity; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49080|akh2_maize : 152.0) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000912.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.38","No alias","Cyanophora paradoxa","(at5g06360 : 396.0) Ribosomal protein S8e family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 792.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000949.46","No alias","Cyanophora paradoxa","(at5g54960 : 523.0) pyruvate decarboxylase-2; pyruvate decarboxylase-2 (PDC2); FUNCTIONS IN: pyruvate decarboxylase activity, magnesium ion binding, carboxy-lyase activity, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: response to hypoxia; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p28516|pdc1_maize : 511.0) Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC) - Zea mays (Maize) & (reliability: 1046.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001003.36","No alias","Cyanophora paradoxa","(at3g23620 : 175.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (q9awm9|bxdc1_orysa : 167.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001029.15","No alias","Cyanophora paradoxa","(at5g40870 : 237.0) Encodes a protein that appears to possess both  uridine kinase and uracil phosphoribosyltransferase activities.; uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19824|kppr_chlre : 84.7) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Chlamydomonas reinhardtii & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001071.15","No alias","Cyanophora paradoxa","(at3g09720 : 417.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (p46942|db10_nicsy : 206.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001073.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001093.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.41","No alias","Cyanophora paradoxa","(at5g58140 : 112.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation.  Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (q67ux0|ado2_orysa : 84.0) Putative adagio-like protein 2 - Oryza sativa (Rice) & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001206.16","No alias","Cyanophora paradoxa","(at1g52930 : 204.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT3G15460.1); Has 418 Blast hits to 416 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 137; Plants - 66; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001415.12","No alias","Cyanophora paradoxa","(at3g55620 : 376.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (o81920|if6_betvu : 302.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020510.75","No alias","Cyanophora paradoxa","(o24047|mdhc_mescr : 231.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Mesembryanthemum crystallinum (Common ice plant) & (at5g56720 : 227.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G04410.1); Has 9504 Blast hits to 9504 proteins in 2703 species: Archae - 135; Bacteria - 5560; Metazoa - 1205; Fungi - 155; Plants - 523; Viruses - 0; Other Eukaryotes - 1926 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020544.6","No alias","Cyanophora paradoxa","(at1g63810 : 316.0) CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.21","No alias","Cyanophora paradoxa","(at4g02400 : 114.0) U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT5G08600.2); Has 7468 Blast hits to 4514 proteins in 366 species: Archae - 14; Bacteria - 554; Metazoa - 2650; Fungi - 816; Plants - 392; Viruses - 146; Other Eukaryotes - 2896 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.23","No alias","Cyanophora paradoxa","(at1g61700 : 129.0) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.; RNA polymerases N / 8 kDa subunit; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: RNA polymerases, N/8kDa subunit (InterPro:IPR000268), RNA polymerases, subunit N, zinc binding site (InterPro:IPR020789), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: RNA polymerases N / 8 kDa subunit (TAIR:AT1G11475.1); Has 943 Blast hits to 943 proteins in 326 species: Archae - 263; Bacteria - 0; Metazoa - 146; Fungi - 184; Plants - 71; Viruses - 3; Other Eukaryotes - 276 (source: NCBI BLink). & (q39290|rpb10_brana : 125.0) DNA-directed RNA polymerase II 8.2 kDa polypeptide (EC 2.7.7.6) (RPB10) (RP10) (ABC10) - Brassica napus (Rape) & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.42","No alias","Cyanophora paradoxa","(at2g34357 : 327.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G23540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020557.9","No alias","Cyanophora paradoxa","(at3g57000 : 194.0) nucleolar essential protein-related; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis, methyltransferase,  EMG1/NEP1 (InterPro:IPR005304); Has 1079 Blast hits to 938 proteins in 280 species: Archae - 143; Bacteria - 12; Metazoa - 353; Fungi - 181; Plants - 69; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.199","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020592.9","No alias","Cyanophora paradoxa","(at5g26180 : 199.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G55920.1); Has 8801 Blast hits to 8742 proteins in 2315 species: Archae - 360; Bacteria - 6022; Metazoa - 655; Fungi - 388; Plants - 256; Viruses - 1; Other Eukaryotes - 1119 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.25","No alias","Cyanophora paradoxa","(q9zts1|sym_orysa : 145.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 140.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.38","No alias","Cyanophora paradoxa","(at5g05450 : 444.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40468|if415_tobac : 166.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020693.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020830.123","No alias","Cyanophora paradoxa","(at5g39440 : 145.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 135.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.19","No alias","Cyanophora paradoxa","(at1g60620 : 348.0) RNA polymerase I subunit 43 (RPAC43); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT1G60850.1); Has 1342 Blast hits to 1342 proteins in 354 species: Archae - 247; Bacteria - 1; Metazoa - 281; Fungi - 345; Plants - 107; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.30","No alias","Cyanophora paradoxa","(at5g42390 : 150.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.46","No alias","Cyanophora paradoxa","(q8s1z1|utp11_orysa : 174.0) Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) - Oryza sativa (Rice) & (at3g60360 : 163.0) EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: megagametogenesis; LOCATED IN: small-subunit processome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp11 (InterPro:IPR007144); Has 434 Blast hits to 428 proteins in 209 species: Archae - 4; Bacteria - 1; Metazoa - 127; Fungi - 141; Plants - 59; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.47","No alias","Cyanophora paradoxa","(at1g51720 : 366.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (q9lec8|dheb_nicpl : 171.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020909.48","No alias","Cyanophora paradoxa","(at1g51720 : 285.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process, cellular amino acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 2 (TAIR:AT5G07440.2); Has 7648 Blast hits to 7641 proteins in 2126 species: Archae - 285; Bacteria - 4383; Metazoa - 351; Fungi - 185; Plants - 378; Viruses - 0; Other Eukaryotes - 2066 (source: NCBI BLink). & (q9lec8|dheb_nicpl : 141.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020912.51","No alias","Cyanophora paradoxa","(at5g61770 : 257.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.35","No alias","Cyanophora paradoxa","(at3g55010 : 176.0) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR); PUR5; FUNCTIONS IN: phosphoribosylformylglycinamidine cyclo-ligase activity, copper ion binding, ATP binding; INVOLVED IN: purine nucleotide biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Phosphoribosylformylglycinamidine cyclo-ligase (InterPro:IPR004733); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52424|pur5_vigun : 174.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.3","No alias","Cyanophora paradoxa","(at1g04945 : 123.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.116","No alias","Cyanophora paradoxa","(at3g57060 : 172.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021319.57","No alias","Cyanophora paradoxa","(at3g27740 : 211.0) carbamoyl phosphate synthetase small subunit mRNA (carA),; carbamoyl phosphate synthetase A (CARA); FUNCTIONS IN: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, catalytic activity; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Carbamoyl phosphate synthase, small subunit, N-terminal (InterPro:IPR002474), Glutamine amidotransferase type 1 (InterPro:IPR017926), Carbamoyl phosphate synthase, small subunit (InterPro:IPR006274), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 28262 Blast hits to 23423 proteins in 4115 species: Archae - 591; Bacteria - 17320; Metazoa - 1741; Fungi - 716; Plants - 245; Viruses - 0; Other Eukaryotes - 7649 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021339.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.38","No alias","Cyanophora paradoxa","(at1g29940 : 348.0) Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).; nuclear RNA polymerase A2 (NRPA2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase I, Rpa2 specific (InterPro:IPR009674), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 19116 Blast hits to 18561 proteins in 6776 species: Archae - 498; Bacteria - 7658; Metazoa - 537; Fungi - 3600; Plants - 1857; Viruses - 241; Other Eukaryotes - 4725 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.6","No alias","Cyanophora paradoxa","(at5g08420 : 286.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); Has 2263 Blast hits to 1799 proteins in 332 species: Archae - 149; Bacteria - 48; Metazoa - 634; Fungi - 309; Plants - 96; Viruses - 0; Other Eukaryotes - 1027 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021580.3","No alias","Cyanophora paradoxa","(at1g08410 : 162.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.16","No alias","Cyanophora paradoxa","(at3g04810 : 99.4) Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 2 (NEK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 3 (TAIR:AT5G28290.1); Has 124376 Blast hits to 122221 proteins in 4182 species: Archae - 113; Bacteria - 14280; Metazoa - 45892; Fungi - 12262; Plants - 30619; Viruses - 487; Other Eukaryotes - 20723 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00021719.20","No alias","Cyanophora paradoxa","(at3g44600 : 623.0) Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.; cyclophilin71 (CYP71); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G36130.1); Has 19122 Blast hits to 18688 proteins in 2726 species: Archae - 110; Bacteria - 7959; Metazoa - 3135; Fungi - 1772; Plants - 1406; Viruses - 0; Other Eukaryotes - 4740 (source: NCBI BLink). & (q41651|cypb_vicfa : 125.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 1246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021719.24","No alias","Cyanophora paradoxa","(at3g10940 : 93.6) dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021719.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021726.3","No alias","Cyanophora paradoxa","(at1g43190 : 235.0) polypyrimidine tract-binding protein 3 (PTB3); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: regulation of RNA splicing, regulation of translation; LOCATED IN: nucleus, cytoplasmic mRNA processing body, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1); Has 2368 Blast hits to 1946 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 1467; Fungi - 40; Plants - 582; Viruses - 0; Other Eukaryotes - 279 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.32","No alias","Cyanophora paradoxa","(at1g77030 : 499.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (q41741|if4a_maize : 174.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.45","No alias","Cyanophora paradoxa","(at2g43650 : 99.0) EMBRYO DEFECTIVE 2777 (EMB2777); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28230.2); Has 14657 Blast hits to 10395 proteins in 729 species: Archae - 127; Bacteria - 2247; Metazoa - 4743; Fungi - 2020; Plants - 661; Viruses - 159; Other Eukaryotes - 4700 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"Glyma.01G087000","No alias","Glycine max","methionine aminopeptidase 1B","protein_coding"
"Glyma.01G100900","No alias","Glycine max","Metal-dependent protein hydrolase","protein_coding"
"Glyma.02G013700","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.02G071900","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.02G078100","No alias","Glycine max","RH39","protein_coding"
"Glyma.02G120300","No alias","Glycine max","fructokinase-like 2","protein_coding"
"Glyma.02G143400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G247700","No alias","Glycine max","Radical SAM superfamily protein","protein_coding"
"Glyma.03G003600","No alias","Glycine max","translocon at the outer envelope membrane of chloroplasts 34","protein_coding"
"Glyma.03G050400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G051600","No alias","Glycine max","BCL-2-associated athanogene 4","protein_coding"
"Glyma.03G065100","No alias","Glycine max","protein kinase 1B","protein_coding"
"Glyma.03G089700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G207900","No alias","Glycine max","NPL4-like protein 1","protein_coding"
"Glyma.03G250700","No alias","Glycine max","Chloroplast J-like domain 1","protein_coding"
"Glyma.04G008700","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.04G037000","No alias","Glycine max","uroporphyrinogen-III synthase family protein","protein_coding"
"Glyma.04G057100","No alias","Glycine max","Protein of unknown function (DUF1677)","protein_coding"
"Glyma.04G225700","No alias","Glycine max","double-stranded DNA binding","protein_coding"
"Glyma.04G256800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G081900","No alias","Glycine max","sucrose nonfermenting 1(SNF1)-related protein kinase 2.3","protein_coding"
"Glyma.05G160032","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.05G199800","No alias","Glycine max","Aldolase-type TIM barrel family protein","protein_coding"
"Glyma.06G152500","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.06G191000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G254700","No alias","Glycine max","3-hydroxyacyl-CoA dehydrogenase family protein","protein_coding"
"Glyma.06G298100","No alias","Glycine max","embryo defective 1923","protein_coding"
"Glyma.07G056600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G179700","No alias","Glycine max","oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding","protein_coding"
"Glyma.08G005600","No alias","Glycine max","calcium-dependent protein kinase 4","protein_coding"
"Glyma.08G007500","No alias","Glycine max","DCD (Development and Cell Death) domain protein","protein_coding"
"Glyma.08G012400","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G045400","No alias","Glycine max","Rubisco methyltransferase family protein","protein_coding"
"Glyma.08G216900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G263000","No alias","Glycine max","male gametophyte defective 3","protein_coding"
"Glyma.08G322800","No alias","Glycine max","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"Glyma.09G007300","No alias","Glycine max","Ribosomal protein L4/L1 family","protein_coding"
"Glyma.09G013600","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.09G023400","No alias","Glycine max","Glycosyl hydrolase family protein","protein_coding"
"Glyma.09G168800","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.10G156900","No alias","Glycine max","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Glyma.10G209300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.11G111800","No alias","Glycine max","Subtilase family protein","protein_coding"
"Glyma.11G176400","No alias","Glycine max","Glycosyl hydrolase family protein","protein_coding"
"Glyma.12G016100","No alias","Glycine max","anaphase-promoting complex subunit 8","protein_coding"
"Glyma.12G211800","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.12G230600","No alias","Glycine max","RAB GTPase homolog A1B","protein_coding"
"Glyma.12G240000","No alias","Glycine max","beta glucosidase 13","protein_coding"
"Glyma.13G066900","No alias","Glycine max","methyltransferases","protein_coding"
"Glyma.13G079200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G120200","No alias","Glycine max","pfkB-like carbohydrate kinase family protein","protein_coding"
"Glyma.13G185300","No alias","Glycine max","SAD1/UNC-84 domain protein 1","protein_coding"
"Glyma.13G191700","No alias","Glycine max","methyltransferases;copper ion binding","protein_coding"
"Glyma.13G232000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.13G298500","No alias","Glycine max","Major facilitator superfamily protein","protein_coding"
"Glyma.14G003900","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.14G069200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G091900","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.14G193600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G089500","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.15G193700","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.16G120200","No alias","Glycine max","Regulator of Vps4 activity in the MVB pathway protein","protein_coding"
"Glyma.17G128600","No alias","Glycine max","arginosuccinate synthase family","protein_coding"
"Glyma.17G148400","No alias","Glycine max","ureidoglycine aminohydrolase","protein_coding"
"Glyma.17G167700","No alias","Glycine max","CYCLIN D3;2","protein_coding"
"Glyma.17G175800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.17G196700","No alias","Glycine max","Cellulose-synthase-like C5","protein_coding"
"Glyma.17G231600","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.18G000700","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.18G008100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G054900","No alias","Glycine max","Excinuclease ABC, C subunit, N-terminal","protein_coding"
"Glyma.18G061200","No alias","Glycine max","Plant protein of unknown function (DUF828)","protein_coding"
"Glyma.18G124800","No alias","Glycine max","ssDNA-binding transcriptional regulator","protein_coding"
"Glyma.18G251400","No alias","Glycine max","Hyaluronan / mRNA binding family","protein_coding"
"Glyma.18G298100","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.19G085300","No alias","Glycine max","Ribosomal protein L9/RNase H1","protein_coding"
"Glyma.19G120000","No alias","Glycine max","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Glyma.19G187500","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.20G103800","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.20G109600","No alias","Glycine max","20S proteasome alpha subunit E2","protein_coding"
"Glyma.20G142800","No alias","Glycine max","peroxisomal adenine nucleotide carrier 1","protein_coding"
"Glyma.20G186700","No alias","Glycine max","Zn-dependent exopeptidases superfamily protein","protein_coding"
"Glyma.20G205100","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.20G240400","No alias","Glycine max","plastid transcriptionally active 17","protein_coding"
"Glyma.20G249300","No alias","Glycine max","cyclophilin 20-2","protein_coding"
"GRMZM2G003875","No alias","Zea mays","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"GRMZM2G006006","No alias","Zea mays","Protein of unknown function (DUF3531)","protein_coding"
"GRMZM2G011858","No alias","Zea mays","root FNR 2","protein_coding"
"GRMZM2G014793","No alias","Zea mays","O-fucosyltransferase family protein","protein_coding"
"GRMZM2G021439","No alias","Zea mays","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"GRMZM2G024444","No alias","Zea mays","Glycosyltransferase family 61 protein","protein_coding"
"GRMZM2G035118","No alias","Zea mays","pumilio 5","protein_coding"
"GRMZM2G041765","No alias","Zea mays","BCL-2-associated athanogene 7","protein_coding"
"GRMZM2G042164","No alias","Zea mays","Peptidase S24/S26A/S26B/S26C family protein","protein_coding"
"GRMZM2G055219","No alias","Zea mays","golgin candidate 1","protein_coding"
"GRMZM2G057576","No alias","Zea mays","Clathrin, heavy chain","protein_coding"
"GRMZM2G058402","No alias","Zea mays","F1F0-ATPase inhibitor protein, putative","protein_coding"
"GRMZM2G058702","No alias","Zea mays","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding"
"GRMZM2G060255","No alias","Zea mays","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"GRMZM2G065016","No alias","Zea mays","Chloroplast Ycf2;ATPase, AAA type, core","protein_coding"
"GRMZM2G065480","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G066775","No alias","Zea mays","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"GRMZM2G069827","No alias","Zea mays","SNF7 family protein","protein_coding"
"GRMZM2G073584","No alias","Zea mays","beta galactosidase 9","protein_coding"
"GRMZM2G074278","No alias","Zea mays","Clathrin adaptor complexes medium subunit family protein","protein_coding"
"GRMZM2G076950","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G088648","No alias","Zea mays","TMPIT-like protein","protein_coding"
"GRMZM2G088995","No alias","Zea mays","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"GRMZM2G096153","No alias","Zea mays","glutathione S-transferase F11","protein_coding"
"GRMZM2G099860","No alias","Zea mays","UDP-Glycosyltransferase / trehalose-phosphatase family protein","protein_coding"
"GRMZM2G101390","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G106136","No alias","Zea mays","Protein of unknown function, DUF617","protein_coding"
"GRMZM2G109405","No alias","Zea mays","purple acid phosphatase 29","protein_coding"
"GRMZM2G116204","No alias","Zea mays","endoplasmic reticulum auxin binding protein 1","protein_coding"
"GRMZM2G117786","No alias","Zea mays","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding"
"GRMZM2G118697","No alias","Zea mays","cleavage and polyadenylation specificity factor 160","protein_coding"
"GRMZM2G119773","No alias","Zea mays","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"GRMZM2G122848","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G124059","No alias","Zea mays","L-Aspartase-like family protein","protein_coding"
"GRMZM2G129879","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G146047","No alias","Zea mays","zinc finger (CCCH type) helicase family protein","protein_coding"
"GRMZM2G150319","No alias","Zea mays","O-fucosyltransferase family protein","protein_coding"
"GRMZM2G150867","No alias","Zea mays","ubiquitin-conjugating enzyme 5","protein_coding"
"GRMZM2G152947","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G152958","No alias","Zea mays","lipoamide dehydrogenase 1","protein_coding"
"GRMZM2G165815","No alias","Zea mays","FRAGILE HISTIDINE TRIAD","protein_coding"
"GRMZM2G167872","No alias","Zea mays","UDP-D-apiose/UDP-D-xylose synthase 2","protein_coding"
"GRMZM2G169539","No alias","Zea mays","MATE efflux family protein","protein_coding"
"GRMZM2G169914","No alias","Zea mays","S-adenosylmethionine carrier 2","protein_coding"
"GRMZM2G172204","No alias","Zea mays","Mannose-binding lectin superfamily protein","protein_coding"
"GRMZM2G176748","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G332294","No alias","Zea mays","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding"
"GRMZM2G335126","No alias","Zea mays","Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein","protein_coding"
"GRMZM2G335978","No alias","Zea mays","Eukaryotic aspartyl protease family protein","protein_coding"
"GRMZM2G418635","No alias","Zea mays","Pectinacetylesterase family protein","protein_coding"
"GRMZM2G431708","No alias","Zea mays","ketose-bisphosphate aldolase class-II family protein","protein_coding"
"GRMZM2G434277","No alias","Zea mays","STRUBBELIG-receptor family 3","protein_coding"
"GRMZM2G457621","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G700866","No alias","Zea mays","Aspartate kinase family protein","protein_coding"
"GRMZM5G840612","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G898887","No alias","Zea mays","Leucine-rich repeat transmembrane protein kinase protein","protein_coding"
"GRMZM5G899656","No alias","Zea mays","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"HORVU0Hr1G039470.1","No alias","Hordeum vulgare","component *(DGL1) of oligosaccharyl transferase (OST) complex & EC_2.4 glycosyltransferase","protein_coding"
"HORVU1Hr1G086610.1","No alias","Hordeum vulgare","E2 ubiquitin-conjugating enzyme","protein_coding"
"HORVU2Hr1G015360.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G015410.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G032910.2","No alias","Hordeum vulgare","component *(mL104) of large mitoribosomal-subunit proteome & regulatory protein *(PNM1) of mitochondrial translation machinery","protein_coding"
"HORVU2Hr1G033970.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G042720.1","No alias","Hordeum vulgare","plastidial RNA splicing factor *(THA8)","protein_coding"
"HORVU2Hr1G079960.4","No alias","Hordeum vulgare","gamma-glutamyl transpeptidase *(GGT)","protein_coding"
"HORVU2Hr1G099460.4","No alias","Hordeum vulgare","subunit epsilon of coat protein complex","protein_coding"
"HORVU2Hr1G104110.1","No alias","Hordeum vulgare","UDP-D-xylose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"HORVU2Hr1G119960.1","No alias","Hordeum vulgare","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"HORVU3Hr1G034020.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G070040.3","No alias","Hordeum vulgare","RNA editing factor *(MEF8) & RNA editing factor *(DYW2)","protein_coding"
"HORVU3Hr1G081380.4","No alias","Hordeum vulgare","E3 ubiquitin ligase","protein_coding"
"HORVU4Hr1G080000.1","No alias","Hordeum vulgare","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"HORVU4Hr1G086010.1","No alias","Hordeum vulgare","regulatory component *(RPN6) of 26S proteasome","protein_coding"
"HORVU5Hr1G041060.2","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(TWD)","protein_coding"
"HORVU5Hr1G041400.1","No alias","Hordeum vulgare","pythosulfokine precursor polypeptide *(PSK)","protein_coding"
"HORVU5Hr1G058270.1","No alias","Hordeum vulgare","subgroup ERF-I transcription factor","protein_coding"
"HORVU5Hr1G100770.1","No alias","Hordeum vulgare","actin-depolymerizing factor","protein_coding"
"HORVU5Hr1G105140.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G112160.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G018370.1","No alias","Hordeum vulgare","membrane-anchored lectin chaperone *(CNX)","protein_coding"
"HORVU6Hr1G063300.2","No alias","Hordeum vulgare","chaperone component *(PEX19) of PEX19 insertion system","protein_coding"
"HORVU6Hr1G071200.3","No alias","Hordeum vulgare","anion channel / anion","protein_coding"
"HORVU6Hr1G082970.1","No alias","Hordeum vulgare","mTERF mitochondrial RNA splicing factor & mTERF-type transcription factor","protein_coding"
"HORVU6Hr1G083430.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(DRR1)","protein_coding"
"HORVU6Hr1G087650.1","No alias","Hordeum vulgare","regulatory component *(RPT5) of 26S proteasome","protein_coding"
"HORVU7Hr1G003860.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G059220.43","No alias","Hordeum vulgare","Kinesin-5-type motor protein","protein_coding"
"HORVU7Hr1G067520.3","No alias","Hordeum vulgare","deadenylase component *(CAF1) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"HORVU7Hr1G115980.1","No alias","Hordeum vulgare","beta-type-3 component *(PBC) of 26S proteasome","protein_coding"
"Kfl00005_0390","kfl00005_0390_v1.1","Klebsormidium nitens","(at1g74850 : 553.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 189.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0760","kfl00009_0760_v1.1","Klebsormidium nitens","(at5g55220 : 408.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 816.0) &  (original description: no original description)","protein_coding"
"Kfl00012_0570","kfl00012_0570_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00013_0100","kfl00013_0100_v1.1","Klebsormidium nitens","(at1g44835 : 197.0) YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"Kfl00014_0510","kfl00014_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0490","kfl00024_0490_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00026_0410","kfl00026_0410_v1.1","Klebsormidium nitens","(at1g73470 : 179.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0240","kfl00028_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00038_0070","kfl00038_0070_v1.1","Klebsormidium nitens","(at2g02500 : 258.0) Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).; ISPD; FUNCTIONS IN: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity; INVOLVED IN: response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (InterPro:IPR001228), 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site (InterPro:IPR018294); Has 6821 Blast hits to 6815 proteins in 2244 species: Archae - 30; Bacteria - 4964; Metazoa - 52; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"Kfl00038_0200","kfl00038_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00040_0420","kfl00040_0420_v1.1","Klebsormidium nitens","(at1g48360 : 150.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"Kfl00041_g2","kfl00041_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00044_0290","kfl00044_0290_v1.1","Klebsormidium nitens","(at1g17690 : 525.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"Kfl00050_0340","kfl00050_0340_v1.1","Klebsormidium nitens","(q08937|roc2_nicsy : 179.0) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (at2g37220 : 176.0) Encodes a chloroplast RNA binding protein.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"Kfl00055_0060","kfl00055_0060_v1.1","Klebsormidium nitens","(at1g30230 : 185.0) Glutathione S-transferase, C-terminal-like;Translation elongation  factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation  factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation  factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (q40680|ef1d1_orysa : 179.0) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation factor 1B-beta 1) (eEF-1B beta 1) - Oryza sativa (Rice) & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"Kfl00056_0310","kfl00056_0310_v1.1","Klebsormidium nitens","(at2g26200 : 348.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410), Methyltransferase type 12 (InterPro:IPR013217); BEST Arabidopsis thaliana protein match is: Methyltransferase family protein (TAIR:AT1G54650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0310","kfl00057_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00060_0350","kfl00060_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00066_0080","kfl00066_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00079_0430","kfl00079_0430_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00083_0160","kfl00083_0160_v1.1","Klebsormidium nitens","(at1g03530 : 92.8) nuclear assembly factor 1 (NAF1); FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity; INVOLVED IN: biological_process unknown; LOCATED IN: box H/ACA snoRNP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); Has 55446 Blast hits to 31211 proteins in 1683 species: Archae - 434; Bacteria - 10062; Metazoa - 16821; Fungi - 8873; Plants - 3938; Viruses - 821; Other Eukaryotes - 14497 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"Kfl00094_0290","kfl00094_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00098_0180","kfl00098_0180_v1.1","Klebsormidium nitens","(at4g36390 : 153.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 149.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"Kfl00106_0260","kfl00106_0260_v1.1","Klebsormidium nitens","(at2g18220 : 486.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 405.0) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00111_0100","kfl00111_0100_v1.1","Klebsormidium nitens","(at3g26840 : 134.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: plastoglobule; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT3G26820.1); Has 601 Blast hits to 592 proteins in 177 species: Archae - 0; Bacteria - 312; Metazoa - 80; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0040","kfl00137_0040_v1.1","Klebsormidium nitens","(at3g53130 : 702.0) Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3.; LUTEIN DEFICIENT 1 (LUT1); FUNCTIONS IN: epsilon hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31038 Blast hits to 30928 proteins in 1581 species: Archae - 62; Bacteria - 3557; Metazoa - 11361; Fungi - 6359; Plants - 8451; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (o48921|c97b2_soybn : 416.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"Kfl00151_0170","kfl00151_0170_v1.1","Klebsormidium nitens","(at1g52370 : 121.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"Kfl00177_0290","kfl00177_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00181_0240","kfl00181_0240_v1.1","Klebsormidium nitens","(at1g03110 : 208.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 13545 Blast hits to 7977 proteins in 481 species: Archae - 46; Bacteria - 4157; Metazoa - 4042; Fungi - 2887; Plants - 1145; Viruses - 0; Other Eukaryotes - 1268 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"Kfl00189_0170","kfl00189_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00225_0110","kfl00225_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00237_0010","kfl00237_0010_v1.1","Klebsormidium nitens","(at3g15460 : 339.0) Ribosomal RNA processing Brix domain protein; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); BEST Arabidopsis thaliana protein match is: Ribosomal RNA processing Brix domain protein (TAIR:AT1G52930.1); Has 415 Blast hits to 413 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 66; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"Kfl00240_0070","kfl00240_0070_v1.1","Klebsormidium nitens","(at5g55280 : 364.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00249_0050","kfl00249_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00282_0120","kfl00282_0120_v1.1","Klebsormidium nitens","(at5g02250 : 421.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"Kfl00310_0080","kfl00310_0080_v1.1","Klebsormidium nitens","(at2g44050 : 199.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 192.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"Kfl00317_0130","kfl00317_0130_v1.1","Klebsormidium nitens","(at4g24175 : 88.6) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"Kfl00322_0110","kfl00322_0110_v1.1","Klebsormidium nitens","(at4g01160 : 82.4) BTB/POZ/Kelch-associated protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: POZ/BTB containin G-protein 1 (TAIR:AT3G61600.2); Has 3481 Blast hits to 3463 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 3173; Fungi - 4; Plants - 136; Viruses - 49; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00323_0150","kfl00323_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00344_0040","kfl00344_0040_v1.1","Klebsormidium nitens","(at5g57590 : 458.0) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.; biotin auxotroph 1 (BIO1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 916.0) &  (original description: no original description)","protein_coding"
"Kfl00354_0120","kfl00354_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00357_0080","kfl00357_0080_v1.1","Klebsormidium nitens","(at1g09830 : 602.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 385.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"Kfl00360_0090","kfl00360_0090_v1.1","Klebsormidium nitens","(at4g04350 : 1214.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (reliability: 2428.0) &  (original description: no original description)","protein_coding"
"Kfl00366_0110","kfl00366_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00402_0130","kfl00402_0130_v1.1","Klebsormidium nitens","(at2g44760 : 109.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"Kfl00412_0200","kfl00412_0200_v1.1","Klebsormidium nitens","(at3g48420 : 341.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39970.1); Has 12560 Blast hits to 12559 proteins in 2179 species: Archae - 78; Bacteria - 10284; Metazoa - 135; Fungi - 145; Plants - 385; Viruses - 3; Other Eukaryotes - 1530 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"Kfl00434_0060","kfl00434_0060_v1.1","Klebsormidium nitens","(at5g35220 : 463.0) Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis.; ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1 (EGY1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast, membrane; EXPRESSED IN: hypocotyl endodermis, flower, peduncle, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: metalloendopeptidases;zinc ion binding;DNA binding (TAIR:AT5G35210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"Kfl00440_0080","kfl00440_0080_v1.1","Klebsormidium nitens","(at1g52510 : 358.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"Kfl00442_0050","kfl00442_0050_v1.1","Klebsormidium nitens","(at5g19820 : 1219.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2438.0) &  (original description: no original description)","protein_coding"
"Kfl00452_0090","kfl00452_0090_v1.1","Klebsormidium nitens","(at1g64860 : 163.0) Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme; sigma factor A (SIGA); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma factor, region 2 (InterPro:IPR013325), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma-70 region 2 (InterPro:IPR007627); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 (TAIR:AT1G08540.1). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"Kfl00513_0120","kfl00513_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00563_0100","kfl00563_0100_v1.1","Klebsormidium nitens","(at1g30520 : 168.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (p31686|4cl1_soybn : 85.1) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment) - Glycine max (Soybean) & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"Kfl00566_0060","kfl00566_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00567_0040","kfl00567_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00704_0055","kfl00704_0055_v1.1","Klebsormidium nitens","(at5g06060 : 322.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q75kh3|grdh_orysa : 133.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"Kfl00729_0030","kfl00729_0030_v1.1","Klebsormidium nitens","(at5g40200 : 650.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1300.0) &  (original description: no original description)","protein_coding"
"Kfl00751_0040","kfl00751_0040_v1.1","Klebsormidium nitens","(at2g40690 : 459.0) Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved  in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous  glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.; GLY1; FUNCTIONS IN: glycerol-3-phosphate dehydrogenase [NAD+] activity; INVOLVED IN: systemic acquired resistance, glycerol-3-phosphate metabolic process, glycerolipid biosynthetic process, glycerolipid metabolic process; LOCATED IN: glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT5G40610.1); Has 8663 Blast hits to 8662 proteins in 2795 species: Archae - 24; Bacteria - 5277; Metazoa - 643; Fungi - 297; Plants - 161; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (reliability: 918.0) &  (original description: no original description)","protein_coding"
"Kfl00796_0080","kfl00796_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00916_0050","kfl00916_0050_v1.1","Klebsormidium nitens","(at3g04890 : 88.6) Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"Kfl00989_0040","kfl00989_0040_v1.1","Klebsormidium nitens","(at2g21440 : 239.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast hits to 495169 proteins in 22089 species: Archae - 21796; Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants - 57391; Viruses - 71662; Other Eukaryotes - 24873 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl00998_0020","kfl00998_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g03110","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g05790","No alias","Oryza sativa","SLT1 protein, putative, expressed","protein_coding"
"LOC_Os01g05900","No alias","Oryza sativa","Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g05970","No alias","Oryza sativa","OsFBO1 - F-box and other domain containing protein, expressed","protein_coding"
"LOC_Os01g14780","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os01g15390","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g31940","No alias","Oryza sativa","purine permease, putative, expressed","protein_coding"
"LOC_Os01g34630","No alias","Oryza sativa","retrotransposon protein, putative, Ty1-copia subclass, expressed","protein_coding"
"LOC_Os01g42380","No alias","Oryza sativa","pleiotropic drug resistance protein, putative, expressed","protein_coding"
"LOC_Os01g44069","No alias","Oryza sativa","glycerol-3-phosphate acyltransferase, putative, expressed","protein_coding"
"LOC_Os01g47460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g47470","No alias","Oryza sativa","serine/threonine-protein kinase, putative, expressed","protein_coding"
"LOC_Os01g53520","No alias","Oryza sativa","reticulon domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g56620","No alias","Oryza sativa","pseudouridylate synthase, putative, expressed","protein_coding"
"LOC_Os01g58630","No alias","Oryza sativa","pentatricopeptide repeat, putative, expressed","protein_coding"
"LOC_Os01g63270","No alias","Oryza sativa","alpha-glucan phosphorylast isozyme, putative, expressed","protein_coding"
"LOC_Os01g64250","No alias","Oryza sativa","hemerythrin family protein, expressed","protein_coding"
"LOC_Os01g73150","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g74600","No alias","Oryza sativa","vegetative storage protein, putative, expressed","protein_coding"
"LOC_Os02g03540","No alias","Oryza sativa","phosphoribosyl transferase, putative, expressed","protein_coding"
"LOC_Os02g04560","No alias","Oryza sativa","marker Xucw84, putative, expressed","protein_coding"
"LOC_Os02g05830","No alias","Oryza sativa","ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os02g05890","No alias","Oryza sativa","EMB1303, putative, expressed","protein_coding"
"LOC_Os02g09220","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g34830","No alias","Oryza sativa","tetratricopeptide repeat domain containing protein, expressed","protein_coding"
"LOC_Os02g36110","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g37870","No alias","Oryza sativa","Brix domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g48390","No alias","Oryza sativa","phosphoribosyl transferase, putative, expressed","protein_coding"
"LOC_Os02g48680","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g53750","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g54710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g55630","No alias","Oryza sativa","COBW domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g58510","No alias","Oryza sativa","GHMP kinases ATP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g03560","No alias","Oryza sativa","FHA domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g08570","No alias","Oryza sativa","amine oxidase, flavin-containing, domain containing protein, expressed","protein_coding"
"LOC_Os03g14120","No alias","Oryza sativa","dihydrodipicolinate reductase, putative, expressed","protein_coding"
"LOC_Os03g15120","No alias","Oryza sativa","imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g15540","No alias","Oryza sativa","HEAT repeat family protein, putative, expressed","protein_coding"
"LOC_Os03g16230","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed","protein_coding"
"LOC_Os03g17010","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os03g18810","No alias","Oryza sativa","aminotransferase, classes I and II, domain containing protein, expressed","protein_coding"
"LOC_Os03g20550","No alias","Oryza sativa","WRKY55, expressed","protein_coding"
"LOC_Os03g21460","No alias","Oryza sativa","metallo-beta-lactamase family protein, putative, expressed","protein_coding"
"LOC_Os03g32620","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os03g37130","No alias","Oryza sativa","ATPAP18/PAP18, putative, expressed","protein_coding"
"LOC_Os03g37570","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g40180","No alias","Oryza sativa","60S ribosomal protein L15, putative, expressed","protein_coding"
"LOC_Os03g50030","No alias","Oryza sativa","phospholipase A2, putative, expressed","protein_coding"
"LOC_Os03g50080","No alias","Oryza sativa","peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed","protein_coding"
"LOC_Os03g50510","No alias","Oryza sativa","threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g56270","No alias","Oryza sativa","receptor protein kinase CLAVATA1 precursor, putative, expressed","protein_coding"
"LOC_Os03g56390","No alias","Oryza sativa","tRNA wybutosine-synthesizing protein 1, putative, expressed","protein_coding"
"LOC_Os03g61220","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 3, putative, expressed","protein_coding"
"LOC_Os03g63410","No alias","Oryza sativa","elongation factor Tu, putative, expressed","protein_coding"
"LOC_Os04g22360","No alias","Oryza sativa","DUF647 domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g35580","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g35760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g39700","No alias","Oryza sativa","60S ribosomal protein L6, putative, expressed","protein_coding"
"LOC_Os04g41040","No alias","Oryza sativa","DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed","protein_coding"
"LOC_Os04g43164","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g54500","No alias","Oryza sativa","POLGAMMA2, putative, expressed","protein_coding"
"LOC_Os04g57950","No alias","Oryza sativa","dihydroorotate dihydrogenase protein, putative, expressed","protein_coding"
"LOC_Os05g01450","No alias","Oryza sativa","eukaryotic translation initiation factor 3 subunit F, putative, expressed","protein_coding"
"LOC_Os05g05950","No alias","Oryza sativa","TOC159, putative, expressed","protein_coding"
"LOC_Os05g06150","No alias","Oryza sativa","vegetative storage protein, putative, expressed","protein_coding"
"LOC_Os05g25060","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g25400","No alias","Oryza sativa","RNA binding protein, putative, expressed","protein_coding"
"LOC_Os05g26040","No alias","Oryza sativa","pumilio-family RNA binding repeat containing protein, expressed","protein_coding"
"LOC_Os05g30710","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os05g33380","No alias","Oryza sativa","fructose-bisphospate aldolase isozyme, putative, expressed","protein_coding"
"LOC_Os05g36000","No alias","Oryza sativa","FabA-like domain containing protein, expressed","protein_coding"
"LOC_Os05g41080","No alias","Oryza sativa","histone H3, putative, expressed","protein_coding"
"LOC_Os05g41110","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os05g44420","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g45270","No alias","Oryza sativa","ribosomal L9, putative, expressed","protein_coding"
"LOC_Os05g46510","No alias","Oryza sativa","polygalacturonase, putative, expressed","protein_coding"
"LOC_Os05g47890","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os05g51500","No alias","Oryza sativa","eukaryotic translation initiation factor 5B, putative, expressed","protein_coding"
"LOC_Os06g01440","No alias","Oryza sativa","integral membrane protein, putative, expressed","protein_coding"
"LOC_Os06g02210","No alias","Oryza sativa","bark storage protein A precursor, putative, expressed","protein_coding"
"LOC_Os06g02600","No alias","Oryza sativa","DAG protein, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os06g03520","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding"
"LOC_Os06g05660","No alias","Oryza sativa","NAP domain containing protein, putative, expressed","protein_coding"
"LOC_Os06g07200","No alias","Oryza sativa","syntaxin, putative, expressed","protein_coding"
"LOC_Os06g16980","No alias","Oryza sativa","DNA topoisomerase I family protein, expressed","protein_coding"
"LOC_Os06g23370","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g23780","No alias","Oryza sativa","glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os06g30310","No alias","Oryza sativa","alpha-glucan water dikinase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os06g35470","No alias","Oryza sativa","L1P family of ribosomal proteins domain containing protein, expressed","protein_coding"
"LOC_Os06g37640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g40440","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g43760","No alias","Oryza sativa","tRNA synthetase class I, putative, expressed","protein_coding"
"LOC_Os06g50880","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os07g01480","No alias","Oryza sativa","oxygen evolving enhancer protein 3 domain containing protein, expressed","protein_coding"
"LOC_Os07g02210","No alias","Oryza sativa","eukaryotic translation initiation factor 5A, putative, expressed","protein_coding"
"LOC_Os07g05570","No alias","Oryza sativa","ERD4 protein, putative, expressed","protein_coding"
"LOC_Os07g08050","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08340","No alias","Oryza sativa","pyruvate kinase, putative, expressed","protein_coding"
"LOC_Os07g09600","No alias","Oryza sativa","vesicle-associated membrane protein, putative, expressed","protein_coding"
"LOC_Os07g10190","No alias","Oryza sativa","glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os07g10660","No alias","Oryza sativa","ribosomal protein, putative, expressed","protein_coding"
"LOC_Os07g10720","No alias","Oryza sativa","40S ribosomal protein S15a, putative, expressed","protein_coding"
"LOC_Os07g12250","No alias","Oryza sativa","ribosomal protein L24, putative, expressed","protein_coding"
"LOC_Os07g23244","No alias","Oryza sativa","ribosomal protein L23 family protein, putative, expressed","protein_coding"
"LOC_Os07g30980","No alias","Oryza sativa","uvrD/REP helicase family protein, putative, expressed","protein_coding"
"LOC_Os07g38430","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os07g41260","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g43120","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g47480","No alias","Oryza sativa","heavy metal-associated domain containing protein, expressed","protein_coding"
"LOC_Os08g01650","No alias","Oryza sativa","Rf1, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os08g09210","No alias","Oryza sativa","phosphoribosylamine--glycine ligase, putative, expressed","protein_coding"
"LOC_Os08g09270","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os08g16120","No alias","Oryza sativa","disease resistance protein RPM1, putative, expressed","protein_coding"
"LOC_Os08g26990","No alias","Oryza sativa","response regulator receiver domain containing protein, expressed","protein_coding"
"LOC_Os08g27040","No alias","Oryza sativa","lipid phosphatase protein, putative, expressed","protein_coding"
"LOC_Os08g27140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g38320","No alias","Oryza sativa","AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os08g44350","No alias","Oryza sativa","histidine-containing phosphotransfer protein, putative, expressed","protein_coding"
"LOC_Os08g44760","No alias","Oryza sativa","domain of unknown function DUF966 domain containing protein, expressed","protein_coding"
"LOC_Os09g02810","No alias","Oryza sativa","CCAAT/enhancer-binding protein, putative, expressed","protein_coding"
"LOC_Os09g15750","No alias","Oryza sativa","proteasome/cyclosome repeat containing protein, expressed","protein_coding"
"LOC_Os09g24590","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g25290","No alias","Oryza sativa","methyladenine glycosylase, putative, expressed","protein_coding"
"LOC_Os09g34010","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g36600","No alias","Oryza sativa","nodulin, putative, expressed","protein_coding"
"LOC_Os09g37040","No alias","Oryza sativa","DUF630/DUF632 domains containing protein, putative, expressed","protein_coding"
"LOC_Os10g03540","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os10g03730","No alias","Oryza sativa","OsFBX347 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g07534","No alias","Oryza sativa","disease resistance protein RPM1, putative, expressed","protein_coding"
"LOC_Os10g31856","No alias","Oryza sativa","midasin-related, putative, expressed","protein_coding"
"LOC_Os10g32780","No alias","Oryza sativa","RING zinc finger ankyrin protein, putative, expressed","protein_coding"
"LOC_Os10g35180","No alias","Oryza sativa","white-brown complex homolog protein 11, putative, expressed","protein_coding"
"LOC_Os10g35730","No alias","Oryza sativa","pentatricopeptide repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os11g04894","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g06780","No alias","Oryza sativa","serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed","protein_coding"
"LOC_Os11g09710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g10520","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding"
"LOC_Os11g11500","No alias","Oryza sativa","serpin domain containing protein, putative, expressed","protein_coding"
"LOC_Os11g16410","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed","protein_coding"
"LOC_Os11g24484","No alias","Oryza sativa","estradiol 17-beta-dehydrogenase 12, putative, expressed","protein_coding"
"LOC_Os11g36740","No alias","Oryza sativa","DUF593 domain containing protein, expressed","protein_coding"
"LOC_Os12g04790","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g05320","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g09540","No alias","Oryza sativa","phosphoribosylamine--glycine ligase, putative, expressed","protein_coding"
"LOC_Os12g19350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g42150","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os12g44100","No alias","Oryza sativa","peptide transporter PTR2, putative, expressed","protein_coding"
"MA_10427923g0010","No alias","Picea abies","(at2g38550 : 165.0) Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G57280.1); Has 138 Blast hits to 137 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 5; Plants - 115; Viruses - 7; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"MA_10428523g0010","No alias","Picea abies","(p93508|calr_ricco : 144.0) Calreticulin precursor - Ricinus communis (Castor bean) & (at1g09210 : 137.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"MA_10431187g0010","No alias","Picea abies","(at1g09830 : 302.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 284.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"MA_10431246g0010","No alias","Picea abies","(at5g58020 : 237.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"MA_10431776g0020","No alias","Picea abies","(p37228|mdhg_soybn : 466.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean) & (at5g09660 : 459.0) encodes a microbody NAD-dependent malate dehydrogenase  encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.; peroxisomal NAD-malate dehydrogenase 2 (PMDH2); FUNCTIONS IN: malate dehydrogenase activity; INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome, microbody; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 918.0) &  (original description: no original description)","protein_coding"
"MA_10432922g0010","No alias","Picea abies","(at3g28345 : 1138.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1123.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2276.0) &  (original description: no original description)","protein_coding"
"MA_10433494g0010","No alias","Picea abies","(at2g26430 : 141.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"MA_10435056g0010","No alias","Picea abies","(at2g20830 : 122.0) transferases;folic acid binding; FUNCTIONS IN: folic acid binding, transferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Formiminotransferase, N-terminal subdomain (InterPro:IPR012886), Formiminotransferas, N- and C-terminal subdomains (InterPro:IPR022384). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"MA_10437165g0010","No alias","Picea abies","(at3g14010 : 258.0) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"MA_108165g0010","No alias","Picea abies","(at4g26630 : 159.0) DEK domain-containing chromatin associated protein; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT5G55660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"MA_112672g0010","No alias","Picea abies","(at2g43160 : 280.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"MA_11380g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_11516g0010","No alias","Picea abies","(at3g47610 : 263.0) transcription regulators;zinc ion binding; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2HC5-type (InterPro:IPR009349); Has 342 Blast hits to 320 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"MA_175476g0010","No alias","Picea abies","(at1g20920 : 1078.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 315.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1978.0) &  (original description: no original description)","protein_coding"
"MA_18794g0010","No alias","Picea abies","(at3g17940 : 439.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G47800.1); Has 4707 Blast hits to 4700 proteins in 1470 species: Archae - 28; Bacteria - 3220; Metazoa - 276; Fungi - 257; Plants - 219; Viruses - 0; Other Eukaryotes - 707 (source: NCBI BLink). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"MA_18990g0020","No alias","Picea abies","(at5g67320 : 161.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"MA_20205g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_261g0010","No alias","Picea abies","(at5g17900 : 372.0) microfibrillar-associated protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Micro-fibrillar-associated 1, C-terminal (InterPro:IPR009730); BEST Arabidopsis thaliana protein match is: microfibrillar-associated protein-related (TAIR:AT4G08580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"MA_289g0020","No alias","Picea abies","(at1g76810 : 925.0) eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76720.1); Has 208612 Blast hits to 135501 proteins in 4311 species: Archae - 1435; Bacteria - 54544; Metazoa - 70572; Fungi - 21896; Plants - 9806; Viruses - 724; Other Eukaryotes - 49635 (source: NCBI BLink). & (p57997|if2c_phavu : 121.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 1778.0) &  (original description: no original description)","protein_coding"
"MA_37513g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_396190g0010","No alias","Picea abies","(at1g79920 : 82.8) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"MA_42020g0010","No alias","Picea abies","(at1g05120 : 343.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 95.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"MA_875959g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_89741g0010","No alias","Picea abies","(q9awm9|bxdc1_orysa : 399.0) Brix domain-containing protein 1 homolog - Oryza sativa (Rice) & (at3g23620 : 374.0) Ribosomal RNA processing Brix domain protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 435 Blast hits to 425 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 138; Plants - 54; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"MA_91633g0010","No alias","Picea abies","(at5g08630 : 513.0) DDT domain-containing protein; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), WSTF/Acf1/Cbp146 (InterPro:IPR013136); Has 7496 Blast hits to 4698 proteins in 418 species: Archae - 4; Bacteria - 337; Metazoa - 2683; Fungi - 719; Plants - 380; Viruses - 89; Other Eukaryotes - 3284 (source: NCBI BLink). & (reliability: 1026.0) &  (original description: no original description)","protein_coding"
"MA_925631g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"Mp1g00230.1","No alias","Marchantia polymorpha","exine patterning factor (DEX1)","protein_coding"
"Mp1g01090.1","No alias","Marchantia polymorpha","exine patterning factor (NEF1)","protein_coding"
"Mp1g06160.1","No alias","Marchantia polymorpha","SSU processome assembly factor (UTP10)","protein_coding"
"Mp1g06580.1","No alias","Marchantia polymorpha","GP210 nucleoporin of nuclear pore complex","protein_coding"
"Mp1g08640.1","No alias","Marchantia polymorpha","transcription factor (MYB)","protein_coding"
"Mp1g11580.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g12500.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g16480.1","No alias","Marchantia polymorpha","tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana (sp|q9c5j6|ipt9_arath : 380.0) & Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 116.7)","protein_coding"
"Mp1g18860.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 132.7) & Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 OS=Arabidopsis thaliana (sp|q9sxs7|cysd2_arath : 132.0)","protein_coding"
"Mp1g22490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g23190.1","No alias","Marchantia polymorpha","siRNA-integrating factor (AGO)","protein_coding"
"Mp1g26330.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g27340.1","No alias","Marchantia polymorpha","RING-HC-class E3 ligase","protein_coding"
"Mp2g05580.1","No alias","Marchantia polymorpha","no description available(sp|f4jv59|cabin_arath : 883.0)","protein_coding"
"Mp2g16400.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 246.9) & Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana (sp|q39023|mpk3_arath : 195.0)","protein_coding"
"Mp2g20920.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g23840.1","No alias","Marchantia polymorpha","snoRNP scaffold component Nop56 of snoRNP rRNA methylation complex","protein_coding"
"Mp2g25780.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g00030.1","No alias","Marchantia polymorpha","CDC20-type (APC/C)-dependent ubiquitination activator protein","protein_coding"
"Mp3g00460.1","No alias","Marchantia polymorpha","protein kinase (LRR-I)","protein_coding"
"Mp3g02370.1","No alias","Marchantia polymorpha","histone (H2A)","protein_coding"
"Mp3g02440.1","No alias","Marchantia polymorpha","protein kinase (CDPK)","protein_coding"
"Mp3g02860.1","No alias","Marchantia polymorpha","component COG7 of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Mp3g03210.1","No alias","Marchantia polymorpha","component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex","protein_coding"
"Mp3g03610.1","No alias","Marchantia polymorpha","cystathionine gamma-synthase","protein_coding"
"Mp3g06860.1","No alias","Marchantia polymorpha","RNA polymerase-IV-positioning factor (SHH). transcription factor (SAWADEE)","protein_coding"
"Mp3g08570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g11520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13780.1","No alias","Marchantia polymorpha","SSU processome assembly factor (UTP21)","protein_coding"
"Mp3g21910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g22040.1","No alias","Marchantia polymorpha","choline monooxygenase","protein_coding"
"Mp4g00410.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g04670.1","No alias","Marchantia polymorpha","BRX1 assembly factor involved in ITS1 rRNA removal","protein_coding"
"Mp4g06570.1","No alias","Marchantia polymorpha","GTP-binding protein At2g22870 OS=Arabidopsis thaliana (sp|o81004|y2287_arath : 98.6)","protein_coding"
"Mp4g06720.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g08560.1","No alias","Marchantia polymorpha","component MAC3 of non-snRNP MOS4-associated complex","protein_coding"
"Mp4g15330.1","No alias","Marchantia polymorpha","component SYF1/MAC9 of non-snRNP MOS4-associated complex","protein_coding"
"Mp4g17850.1","No alias","Marchantia polymorpha","solute transporter (TPPT)","protein_coding"
"Mp4g18670.1","No alias","Marchantia polymorpha","glycinamide RN synthetase (GARS)","protein_coding"
"Mp5g00060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g02250.1","No alias","Marchantia polymorpha","subunit alpha of NAC ribosome-associated chaperone complex","protein_coding"
"Mp5g06990.1","No alias","Marchantia polymorpha","component VPS2/CHMP2 of ESCRT-III complex","protein_coding"
"Mp5g10550.1","No alias","Marchantia polymorpha","O-fucosyltransferase 30 OS=Arabidopsis thaliana (sp|q1jpm5|oft30_arath : 191.0)","protein_coding"
"Mp5g15900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g23290.1","No alias","Marchantia polymorpha","component TRAPPC2/TRS20 of TRAPP complex","protein_coding"
"Mp5g23340.1","No alias","Marchantia polymorpha","ALADIN scaffold nucleoporin of nuclear pore complex","protein_coding"
"Mp6g03910.1","No alias","Marchantia polymorpha","proton:potassium cation antiporter (KEA)","protein_coding"
"Mp6g06670.1","No alias","Marchantia polymorpha","component PIG-T of GPI transamidase complex","protein_coding"
"Mp6g07820.1","No alias","Marchantia polymorpha","component alpha type-4 of 26S proteasome","protein_coding"
"Mp6g08180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g08990.1","No alias","Marchantia polymorpha","pre-40S ribosomal subunit assembly factor (UTP22)","protein_coding"
"Mp6g12550.1","No alias","Marchantia polymorpha","helicase component RVB of chromatin remodeling complex","protein_coding"
"Mp6g13150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g13900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g20350.1","No alias","Marchantia polymorpha","RNA editing factor (WTG1)","protein_coding"
"Mp7g01230.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g06450.1","No alias","Marchantia polymorpha","tRNA pseudouridine synthase (TruA)","protein_coding"
"Mp7g07690.1","No alias","Marchantia polymorpha","rRNA biogenesis RNA helicase (ROK1)","protein_coding"
"Mp7g11980.1","No alias","Marchantia polymorpha","Indole-3-acetate O-methyltransferase 1 OS=Arabidopsis thaliana (sp|q9fln8|iamt1_arath : 240.0) & Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 139.4)","protein_coding"
"Mp7g12760.1","No alias","Marchantia polymorpha","component RPS27a of SSU proteome","protein_coding"
"Mp7g13920.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g14560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17200.1","No alias","Marchantia polymorpha","transcription factor (WRKY)","protein_coding"
"Mp7g17310.1","No alias","Marchantia polymorpha","cytosolic NADP-dependent malic enzyme","protein_coding"
"Mp8g03190.1","No alias","Marchantia polymorpha","component THOC5 of mRNP trafficking THO subcomplex","protein_coding"
"Mp8g05690.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07000.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07360.1","No alias","Marchantia polymorpha","protein factor NHP2L1/SNU13 of U4/U6 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp8g08070.1","No alias","Marchantia polymorpha","SSU processome assembly factor (TOZ)","protein_coding"
"Mp8g11140.1","No alias","Marchantia polymorpha","protein factor SNU114/U5-116kDa of U5 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp8g11200.1","No alias","Marchantia polymorpha","Nodulin-26-like intrinsic protein (NIP)","protein_coding"
"Mp8g13930.1","No alias","Marchantia polymorpha","UBP1-associated proteins 1C OS=Arabidopsis thaliana (sp|o64571|uba1c_arath : 94.7)","protein_coding"
"Potri.004G225300","No alias","Populus trichocarpa","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Potri.004G225500","No alias","Populus trichocarpa","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"Pp1s10_164V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s10_248V6","No alias","Physcomitrella patens","oxidoreductase family protein","protein_coding"
"Pp1s121_27V6","No alias","Physcomitrella patens","ku p80 dna","protein_coding"
"Pp1s122_165V6","No alias","Physcomitrella patens","dna a subunit","protein_coding"
"Pp1s125_16V6","No alias","Physcomitrella patens","chloroplast lumenal protein","protein_coding"
"Pp1s127_20V6","No alias","Physcomitrella patens","K15M2.4; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s129_145V6","No alias","Physcomitrella patens","snornp protein","protein_coding"
"Pp1s129_87V6","No alias","Physcomitrella patens","short-chain dehydrogenase reductase sdr","protein_coding"
"Pp1s12_192V6","No alias","Physcomitrella patens","phosphoribosylamine--glycine ligase","protein_coding"
"Pp1s130_78V6","No alias","Physcomitrella patens","clathrin coat adaptor ap3 medium","protein_coding"
"Pp1s133_102V6","No alias","Physcomitrella patens","peptidyl-prolyl cis-trans isomerase","protein_coding"
"Pp1s134_54V6","No alias","Physcomitrella patens","at4g20130-like protein","protein_coding"
"Pp1s140_60V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3","protein_coding"
"Pp1s149_291V6","No alias","Physcomitrella patens","structural constituent of ribosome","protein_coding"
"Pp1s154_103V6","No alias","Physcomitrella patens","hydroxymethylglutaryl- synthase","protein_coding"
"Pp1s155_86V6","No alias","Physcomitrella patens","contains ESTs AU096327(S13491),AU070375(S13491) similar to Arabidopsis thaliana chromosome 3, T29H11.70 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s160_12V6","No alias","Physcomitrella patens","ap2 domain transcription factor","protein_coding"
"Pp1s162_10V6","No alias","Physcomitrella patens","acetolactate synthase amino acid binding protein","protein_coding"
"Pp1s163_18V6","No alias","Physcomitrella patens","ribosomal protein s17","protein_coding"
"Pp1s167_1V6","No alias","Physcomitrella patens","gdp dissociation inhibitor","protein_coding"
"Pp1s16_25V6","No alias","Physcomitrella patens","elongation factor tu","protein_coding"
"Pp1s16_261V6","No alias","Physcomitrella patens","serine carboxypeptidase ii","protein_coding"
"Pp1s175_128V6","No alias","Physcomitrella patens","phosphoribosylamine--glycine ligase","protein_coding"
"Pp1s188_9V6","No alias","Physcomitrella patens","LOC497725; hypothetical gene supported by NM_031809 [Rattus norvegicus]","protein_coding"
"Pp1s195_98V6","No alias","Physcomitrella patens","T18K17.15; eukaryotic translation initiation factor-related [Arabidopsis thaliana]","protein_coding"
"Pp1s1_405V6","No alias","Physcomitrella patens","F28O16.5; 12-oxophytodienoate reductase (OPR1) [Arabidopsis thaliana]","protein_coding"
"Pp1s200_101V6","No alias","Physcomitrella patens","PREDICTED: hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s21_361V6","No alias","Physcomitrella patens","T1K7.17; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s223_122V6","No alias","Physcomitrella patens","trafficking protein particle complex subunit 2-like protein","protein_coding"
"Pp1s227_112V6","No alias","Physcomitrella patens","proliferating cell nuclear antigen","protein_coding"
"Pp1s23_107V6","No alias","Physcomitrella patens","aldose 1-epimerase family protein","protein_coding"
"Pp1s23_281V6","No alias","Physcomitrella patens","dihydrodipicolinate synthase","protein_coding"
"Pp1s241_103V6","No alias","Physcomitrella patens","T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) [Arabidopsis thaliana]","protein_coding"
"Pp1s246_119V6","No alias","Physcomitrella patens","rna binding protein rp120","protein_coding"
"Pp1s258_78V6","No alias","Physcomitrella patens","set domain-containing protein","protein_coding"
"Pp1s263_70V6","No alias","Physcomitrella patens","loc398434 protein","protein_coding"
"Pp1s275_35V6","No alias","Physcomitrella patens","l-galactose-1-phosphate phosphatase","protein_coding"
"Pp1s276_2V6","No alias","Physcomitrella patens","receptor of activated protein kinase c component of 40s small ribosomal subunit","protein_coding"
"Pp1s27_246V6","No alias","Physcomitrella patens","trna pseudouridine synthase a","protein_coding"
"Pp1s29_152V6","No alias","Physcomitrella patens","dihydroorotate dehydrogenase","protein_coding"
"Pp1s2_734V6","No alias","Physcomitrella patens","nadp-malic enzyme","protein_coding"
"Pp1s306_37V6","No alias","Physcomitrella patens","peroxidase 52","protein_coding"
"Pp1s310_30V6","No alias","Physcomitrella patens","atp synthase beta chain","protein_coding"
"Pp1s328_44V6","No alias","Physcomitrella patens","profilin","protein_coding"
"Pp1s32_160V6","No alias","Physcomitrella patens","quinone-oxidoreductase qr2","protein_coding"
"Pp1s336_17V6","No alias","Physcomitrella patens","adenylyl-sulfate kinase chloroplast precursor","protein_coding"
"Pp1s33_221V6","No alias","Physcomitrella patens","thimet oligopeptidase 1","protein_coding"
"Pp1s33_331V6","No alias","Physcomitrella patens","F5D14.2; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s34_360V6","No alias","Physcomitrella patens","bifunctional dihydrofolate reductase-thymidylate synthase","protein_coding"
"Pp1s351_29V6","No alias","Physcomitrella patens","histone deacetylase","protein_coding"
"Pp1s355_18V6","No alias","Physcomitrella patens","MNJ7.27; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s374_5V6","No alias","Physcomitrella patens","phosphate transporter","protein_coding"
"Pp1s387_49V6","No alias","Physcomitrella patens","phosphoglucomutase phosphomannomutase c terminal thioesterase superfamily","protein_coding"
"Pp1s3_460V6","No alias","Physcomitrella patens","ribulose-phosphate 3-epimerase","protein_coding"
"Pp1s3_535V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s426_3V6","No alias","Physcomitrella patens","4,5 dioxygenase extradiol","protein_coding"
"Pp1s43_32V6","No alias","Physcomitrella patens","carbamoyl-phosphate large glutamine-dependent","protein_coding"
"Pp1s47_263V6","No alias","Physcomitrella patens","GA469.2; HAL2-related protein (Ahl) [Arabidopsis thaliana]","protein_coding"
"Pp1s54_77V6","No alias","Physcomitrella patens","biotin carboxyl carrier protein subunit of of het-accase","protein_coding"
"Pp1s55_98V6","No alias","Physcomitrella patens","benzoquinone reductase","protein_coding"
"Pp1s56_227V6","No alias","Physcomitrella patens","methyltransferase wbscr22","protein_coding"
"Pp1s59_167V6","No alias","Physcomitrella patens","elongation factor 1-","protein_coding"
"Pp1s59_93V6","No alias","Physcomitrella patens","F8D20.270; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s60_103V6","No alias","Physcomitrella patens","peroxidase","protein_coding"
"Pp1s60_189V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3 subunit","protein_coding"
"Pp1s60_224V6","No alias","Physcomitrella patens","protein saal1","protein_coding"
"Pp1s64_23V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s66_190V6","No alias","Physcomitrella patens","methionyl-trna synthetase","protein_coding"
"Pp1s67_134V6","No alias","Physcomitrella patens","translation initiation factor eif-2b beta subunit","protein_coding"
"Pp1s78_15V6","No alias","Physcomitrella patens","transmembrane emp24 domain-containing protein 10","protein_coding"
"Pp1s79_171V6","No alias","Physcomitrella patens","26s protease regulatory subunit 6b","protein_coding"
"Pp1s79_94V6","No alias","Physcomitrella patens","haloacid dehalogenase-like hydrolase domain-containing protein 1a","protein_coding"
"Pp1s7_185V6","No alias","Physcomitrella patens","FCAALL.129; DNA-binding protein-related [Arabidopsis thaliana]","protein_coding"
"Pp1s96_121V6","No alias","Physcomitrella patens","xyloglucan 6-","protein_coding"
"PSME_00000411-RA","No alias","Pseudotsuga menziesii","(at5g04720 : 464.0) ADR1-like 2 (ADR1-L2); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: apoptosis, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 1 (TAIR:AT4G33300.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 928.0) &  (original description: no original description)","protein_coding"
"PSME_00000419-RA","No alias","Pseudotsuga menziesii","(at4g33300 : 477.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 954.0) &  (original description: no original description)","protein_coding"
"PSME_00000513-RA","No alias","Pseudotsuga menziesii","(at3g02720 : 481.0) Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C56, PfpI (InterPro:IPR006286), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G38860.2); Has 9235 Blast hits to 5440 proteins in 1716 species: Archae - 384; Bacteria - 8047; Metazoa - 84; Fungi - 88; Plants - 239; Viruses - 0; Other Eukaryotes - 393 (source: NCBI BLink). & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00000827-RA","No alias","Pseudotsuga menziesii","(at5g40380 : 313.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 171.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00001120-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001717-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001865-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001958-RA","No alias","Pseudotsuga menziesii","(at3g02600 : 227.0) Encodes phosphatidic acid phosphatase. Expressed during germination.; lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"PSME_00002060-RA","No alias","Pseudotsuga menziesii","(at5g10200 : 697.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G43120.1); Has 2055 Blast hits to 1944 proteins in 240 species: Archae - 0; Bacteria - 3; Metazoa - 1049; Fungi - 393; Plants - 364; Viruses - 4; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 1394.0) &  (original description: no original description)","protein_coding"
"PSME_00002069-RA","No alias","Pseudotsuga menziesii","(at3g18080 : 425.0) B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink). & (p49235|bglc_maize : 351.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"PSME_00002071-RA","No alias","Pseudotsuga menziesii","(at5g54570 : 457.0) beta glucosidase 41 (BGLU41); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 40 (TAIR:AT1G26560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p49235|bglc_maize : 378.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"PSME_00002077-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 481.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00002495-RA","No alias","Pseudotsuga menziesii","(at1g32240 : 135.0) Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.; KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00002674-RA","No alias","Pseudotsuga menziesii","(at3g51680 : 247.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 223.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"PSME_00002845-RA","No alias","Pseudotsuga menziesii","(at3g21420 : 314.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: senescence-related gene 1 (TAIR:AT1G17020.1); Has 8953 Blast hits to 8890 proteins in 1011 species: Archae - 0; Bacteria - 1172; Metazoa - 113; Fungi - 1056; Plants - 5016; Viruses - 0; Other Eukaryotes - 1596 (source: NCBI BLink). & (p31237|acco_actch : 197.0) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 628.0) &  (original description: no original description)","protein_coding"
"PSME_00003542-RA","No alias","Pseudotsuga menziesii","(at1g15690 : 179.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (p21616|avp_phaau : 169.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00004147-RA","No alias","Pseudotsuga menziesii","(at3g13030 : 96.3) hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13020.1); Has 625 Blast hits to 607 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 623; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00004166-RA","No alias","Pseudotsuga menziesii","(at5g16710 : 114.0) The protein undergoes thiolation following treatment with the  oxidant tert-butylhydroperoxide.; dehydroascorbate reductase 1 (DHAR3); FUNCTIONS IN: glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase 2 (TAIR:AT1G75270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00004371-RA","No alias","Pseudotsuga menziesii",""(at3g56630 : 262.0) member of CYP94D; ""cytochrome P450, family 94, subfamily D, polypeptide 2"" (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)"","protein_coding"
"PSME_00004982-RA","No alias","Pseudotsuga menziesii","(at2g44480 : 481.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 409.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00005023-RA","No alias","Pseudotsuga menziesii","(at2g16850 : 399.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q7xlr1|pip26_orysa : 384.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"PSME_00005066-RA","No alias","Pseudotsuga menziesii","(at4g27220 : 191.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00005153-RA","No alias","Pseudotsuga menziesii","(at1g12580 : 210.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (p53683|cdpk2_orysa : 134.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00005596-RA","No alias","Pseudotsuga menziesii","(at1g27480 : 427.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00005674-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00005940-RA","No alias","Pseudotsuga menziesii","(at5g15410 : 820.0) 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile.  Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.; DEFENSE NO DEATH 1 (DND1); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated cation channel 4 (TAIR:AT5G54250.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1640.0) &  (original description: no original description)","protein_coding"
"PSME_00006024-RA","No alias","Pseudotsuga menziesii","(at2g41040 : 214.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G78140.1); Has 8121 Blast hits to 8118 proteins in 1828 species: Archae - 365; Bacteria - 6420; Metazoa - 92; Fungi - 271; Plants - 324; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"PSME_00006311-RA","No alias","Pseudotsuga menziesii","(at4g16570 : 150.0) protein arginine methyltransferase 7 (PRMT7); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein arginine N-methyltransferase (InterPro:IPR014644); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00006312-RA","No alias","Pseudotsuga menziesii","(at4g16570 : 255.0) protein arginine methyltransferase 7 (PRMT7); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein arginine N-methyltransferase (InterPro:IPR014644); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4A (TAIR:AT5G49020.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"PSME_00006670-RA","No alias","Pseudotsuga menziesii","(at3g26100 : 532.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 228.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"PSME_00006689-RA","No alias","Pseudotsuga menziesii","(at5g16010 : 223.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"PSME_00006825-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 324.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 198.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00006826-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 373.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 213.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"PSME_00006966-RA","No alias","Pseudotsuga menziesii","(at1g80460 : 725.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1450.0) &  (original description: no original description)","protein_coding"
"PSME_00008289-RA","No alias","Pseudotsuga menziesii","(at2g26070 : 291.0) Encodes a predicted membrane protein.  Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes.  The sequence has no known motifs and no biological function has been assigned in any species.  In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.; REVERSION-TO-ETHYLENE SENSITIVITY1 (RTE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF778 (InterPro:IPR008496); BEST Arabidopsis thaliana protein match is: RTE1-homolog (TAIR:AT3G51040.3); Has 292 Blast hits to 292 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"PSME_00008912-RA","No alias","Pseudotsuga menziesii","(at5g23230 : 197.0) nicotinamidase 2 (NIC2); CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 3 (TAIR:AT5G23220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00009003-RA","No alias","Pseudotsuga menziesii","(at1g31710 : 403.0) Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1551 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 247; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (q43077|amo_pea : 363.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"PSME_00009018-RA","No alias","Pseudotsuga menziesii","(at3g11200 : 187.0) AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.; alfin-like 2 (AL2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 1 (TAIR:AT5G05610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00009047-RA","No alias","Pseudotsuga menziesii","(at5g62740 : 447.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"PSME_00010236-RA","No alias","Pseudotsuga menziesii","(at1g78380 : 231.0) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; glutathione S-transferase TAU 19 (GSTU19); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone, toxin catabolic process, cellular response to water deprivation; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6888 Blast hits to 6873 proteins in 1203 species: Archae - 0; Bacteria - 3293; Metazoa - 563; Fungi - 167; Plants - 2052; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (p49332|gstxc_tobac : 225.0) Probable glutathione S-transferase parC (EC 2.5.1.18) (Auxin-regulated protein parC) - Nicotiana tabacum (Common tobacco) & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00010469-RA","No alias","Pseudotsuga menziesii","(at1g27970 : 197.0) Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.; nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (q9xj54|ntf2_orysa : 152.0) Nuclear transport factor 2 (NTF-2) - Oryza sativa (Rice) & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00010797-RA","No alias","Pseudotsuga menziesii","(at5g07990 : 358.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (p48418|c75a1_pethy : 355.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"PSME_00010809-RA","No alias","Pseudotsuga menziesii","(at3g48000 : 619.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (p17202|badh_spiol : 388.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00011016-RA","No alias","Pseudotsuga menziesii","(at1g01630 : 154.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00011144-RA","No alias","Pseudotsuga menziesii","(at4g10260 : 414.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT3G59480.1); Has 19547 Blast hits to 19543 proteins in 2443 species: Archae - 410; Bacteria - 14542; Metazoa - 141; Fungi - 136; Plants - 489; Viruses - 0; Other Eukaryotes - 3829 (source: NCBI BLink). & (q944f5|scrk2_orysa : 403.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (reliability: 828.0) &  (original description: no original description)","protein_coding"
"PSME_00011246-RA","No alias","Pseudotsuga menziesii","(at5g55280 : 357.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"PSME_00011666-RA","No alias","Pseudotsuga menziesii","(at4g15450 : 254.0) Senescence/dehydration-associated protein-related; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT3G21600.1); Has 171 Blast hits to 171 proteins in 35 species: Archae - 0; Bacteria - 4; Metazoa - 29; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"PSME_00011847-RA","No alias","Pseudotsuga menziesii","(at1g08630 : 188.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.; threonine aldolase 1 (THA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: threonine aldolase 2 (TAIR:AT3G04520.2); Has 3797 Blast hits to 3793 proteins in 1149 species: Archae - 25; Bacteria - 2286; Metazoa - 91; Fungi - 253; Plants - 87; Viruses - 0; Other Eukaryotes - 1055 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00011848-RA","No alias","Pseudotsuga menziesii","(at3g04520 : 195.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Expressed in vascular tissue through out the plant.; threonine aldolase 2 (THA2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: threonine aldolase 1 (TAIR:AT1G08630.4). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00011849-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00012807-RA","No alias","Pseudotsuga menziesii","(at5g53970 : 271.0) encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment; Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"PSME_00013559-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00014024-RA","No alias","Pseudotsuga menziesii","(at2g24130 : 458.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 365.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 916.0) &  (original description: no original description)","protein_coding"
"PSME_00014479-RA","No alias","Pseudotsuga menziesii","(at1g12775 : 307.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 283.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00014740-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 378.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 286.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 756.0) &  (original description: no original description)","protein_coding"
"PSME_00014784-RA","No alias","Pseudotsuga menziesii","(at2g34840 : 150.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: COPI vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT1G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00015091-RA","No alias","Pseudotsuga menziesii","(at2g44480 : 470.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 405.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 940.0) &  (original description: no original description)","protein_coding"
"PSME_00015210-RA","No alias","Pseudotsuga menziesii","(at5g12950 : 252.0) FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"PSME_00015309-RA","No alias","Pseudotsuga menziesii","(at2g39980 : 157.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o24645|hcbt1_diaca : 139.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"PSME_00015857-RA","No alias","Pseudotsuga menziesii","(at4g32700 : 177.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (p42210|aspr_horvu : 92.8) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase) [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] - Hordeum vulgare (Barley) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00015920-RA","No alias","Pseudotsuga menziesii","(at5g47520 : 249.0) RAB GTPase homolog A5A (RABA5a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39434|rb2bv_betvu : 219.0) Ras-related protein Rab2BV - Beta vulgaris (Sugar beet) & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00016674-RA","No alias","Pseudotsuga menziesii","(at3g19390 : 322.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 9061 Blast hits to 8168 proteins in 770 species: Archae - 67; Bacteria - 297; Metazoa - 4335; Fungi - 6; Plants - 1937; Viruses - 140; Other Eukaryotes - 2279 (source: NCBI BLink). & (p25776|orya_orysa : 313.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"PSME_00016675-RA","No alias","Pseudotsuga menziesii","(at3g20660 : 479.0) organic cation/carnitine transporter4 (4-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: pseudogene (TAIR:AT1G73220.1); Has 27723 Blast hits to 27519 proteins in 2032 species: Archae - 544; Bacteria - 15020; Metazoa - 4940; Fungi - 4480; Plants - 1745; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (reliability: 958.0) &  (original description: no original description)","protein_coding"
"PSME_00017096-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00017295-RA","No alias","Pseudotsuga menziesii","(at4g02780 : 133.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 132.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00017414-RA","No alias","Pseudotsuga menziesii","(at5g47000 : 311.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, xylan 1,4-beta-xylosidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G17690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p22196|per2_arahy : 206.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"PSME_00017546-RA","No alias","Pseudotsuga menziesii","(at3g10870 : 113.0) Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.; methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"PSME_00018209-RA","No alias","Pseudotsuga menziesii","(at3g19390 : 248.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 9061 Blast hits to 8168 proteins in 770 species: Archae - 67; Bacteria - 297; Metazoa - 4335; Fungi - 6; Plants - 1937; Viruses - 140; Other Eukaryotes - 2279 (source: NCBI BLink). & (p25776|orya_orysa : 248.0) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"PSME_00019243-RA","No alias","Pseudotsuga menziesii","(at1g63660 : 308.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00019273-RA","No alias","Pseudotsuga menziesii","(at5g47520 : 254.0) RAB GTPase homolog A5A (RABA5a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39572|yptc6_chlre : 224.0) Ras-related protein YPTC6 - Chlamydomonas reinhardtii & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"PSME_00019679-RA","No alias","Pseudotsuga menziesii","(p59287|cass_ricco : 251.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (at4g16730 : 232.0) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00019897-RA","No alias","Pseudotsuga menziesii","(at5g45170 : 212.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 352 Blast hits to 346 proteins in 109 species: Archae - 0; Bacteria - 170; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"PSME_00020038-RA","No alias","Pseudotsuga menziesii","(at1g27040 : 489.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"PSME_00020294-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 539.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 1078.0) &  (original description: no original description)","protein_coding"
"PSME_00020361-RA","No alias","Pseudotsuga menziesii","(at1g07380 : 495.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT5G58980.1); Has 713 Blast hits to 570 proteins in 199 species: Archae - 0; Bacteria - 295; Metazoa - 184; Fungi - 101; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 990.0) &  (original description: no original description)","protein_coding"
"PSME_00020949-RA","No alias","Pseudotsuga menziesii","(at5g39710 : 209.0) EMBRYO DEFECTIVE 2745 (EMB2745); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G55840.1); Has 65335 Blast hits to 15466 proteins in 320 species: Archae - 6; Bacteria - 88; Metazoa - 1398; Fungi - 1479; Plants - 59659; Viruses - 0; Other Eukaryotes - 2705 (source: NCBI BLink). & (q76c99|rf1_orysa : 191.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00020990-RA","No alias","Pseudotsuga menziesii","(at1g74260 : 505.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1010.0) &  (original description: no original description)","protein_coding"
"PSME_00022039-RA","No alias","Pseudotsuga menziesii",""(at5g38450 : 372.0) member of CYP709A; ""cytochrome P450, family 735, subfamily A, polypeptide 1"" (CYP735A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 2 (TAIR:AT1G67110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q05047|c72a1_catro : 264.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 744.0) &  (original description: no original description)"","protein_coding"
"PSME_00022474-RA","No alias","Pseudotsuga menziesii","(at1g34300 : 613.0) lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT2G19130.1); Has 120498 Blast hits to 118775 proteins in 4615 species: Archae - 117; Bacteria - 12995; Metazoa - 44949; Fungi - 10067; Plants - 34445; Viruses - 432; Other Eukaryotes - 17493 (source: NCBI BLink). & (p17801|kpro_maize : 231.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1226.0) &  (original description: no original description)","protein_coding"
"PSME_00023177-RA","No alias","Pseudotsuga menziesii","(at5g45190 : 360.0) Encodes a cyclin T partner CYCT1;5.  Plays important roles in infection with Cauliflower mosaic virus (CaMV).; Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: in 6 processes; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Transcription regulator cyclin (InterPro:IPR015429), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT4G19600.1); Has 4079 Blast hits to 3698 proteins in 345 species: Archae - 2; Bacteria - 149; Metazoa - 1860; Fungi - 545; Plants - 474; Viruses - 8; Other Eukaryotes - 1041 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00024118-RA","No alias","Pseudotsuga menziesii","(at5g17170 : 234.0) enhancer of sos3-1 (ENH1); FUNCTIONS IN: metal ion binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: protein containing PDZ domain, a K-box domain, and a TPR region (TAIR:AT1G55480.1); Has 199 Blast hits to 197 proteins in 82 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00024268-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 372.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 271.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"PSME_00024455-RA","No alias","Pseudotsuga menziesii","(p09189|hsp7c_pethy : 499.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (at5g02500 : 498.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"PSME_00024576-RA","No alias","Pseudotsuga menziesii","(at4g21120 : 694.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 1388.0) &  (original description: no original description)","protein_coding"
"PSME_00025034-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 451.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 284.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00025131-RA","No alias","Pseudotsuga menziesii","(at5g23940 : 167.0) Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase.  Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion).  Additional phenotype includes altered cuticle layer.; PERMEABLE LEAVES3 (PEL3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: epidermis morphogenesis, localization, trichome morphogenesis, cutin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 138.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"PSME_00025261-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025376-RA","No alias","Pseudotsuga menziesii","(at5g36210 : 369.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"PSME_00025552-RA","No alias","Pseudotsuga menziesii","(p59287|cass_ricco : 251.0) Casbene synthase, chloroplast precursor (EC 4.2.3.8) - Ricinus communis (Castor bean) & (at4g16730 : 241.0) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"PSME_00025739-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 270.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"PSME_00026013-RA","No alias","Pseudotsuga menziesii","(at3g51280 : 275.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 898 Blast hits to 725 proteins in 125 species: Archae - 8; Bacteria - 246; Metazoa - 0; Fungi - 4; Plants - 180; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink). & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"PSME_00026692-RA","No alias","Pseudotsuga menziesii","(at3g06060 : 164.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00027003-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 432.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 411.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"PSME_00027035-RA","No alias","Pseudotsuga menziesii","(at1g31710 : 372.0) Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1551 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 247; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (q43077|amo_pea : 334.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (reliability: 744.0) &  (original description: no original description)","protein_coding"
"PSME_00027188-RA","No alias","Pseudotsuga menziesii","(at1g17220 : 208.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 187.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00027308-RA","No alias","Pseudotsuga menziesii","(q9mbd8|bi1_orysa : 96.7) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (at5g47120 : 89.4) Encodes BI-1, a homolog of mammalian Bax inhibitor 1.  Functions as an attenuator of biotic and abiotic types of cell death.  Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"PSME_00027317-RA","No alias","Pseudotsuga menziesii","(at2g34840 : 148.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: COPI vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT1G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"PSME_00027608-RA","No alias","Pseudotsuga menziesii","(q40665|tbb3_orysa : 266.0) Tubulin beta-3 chain (Beta-3 tubulin) - Oryza sativa (Rice) & (at1g75780 : 265.0) beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses; tubulin beta-1 chain (TUB1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to light stimulus, unidimensional cell growth; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-5 chain (TAIR:AT1G20010.1); Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 36; Bacteria - 42; Metazoa - 4470; Fungi - 14216; Plants - 1549; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00027615-RA","No alias","Pseudotsuga menziesii","(at2g29200 : 342.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 1 (PUM1); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 3 (TAIR:AT2G29140.1); Has 3905 Blast hits to 1986 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 808; Fungi - 1312; Plants - 896; Viruses - 0; Other Eukaryotes - 889 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"PSME_00027838-RA","No alias","Pseudotsuga menziesii","(p51106|dfra_horvu : 229.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Hordeum vulgare (Barley) & (at5g42800 : 222.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"PSME_00027900-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 293.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q40634|acco1_orysa : 145.0) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) - Oryza sativa (Rice) & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"PSME_00028016-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 280.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00028030-RA","No alias","Pseudotsuga menziesii","(at5g55250 : 429.0) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members  catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.; IAA carboxylmethyltransferase 1 (IAMT1); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 921 Blast hits to 905 proteins in 124 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 194.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00028261-RA","No alias","Pseudotsuga menziesii","(at4g29720 : 95.1) polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"PSME_00028694-RA","No alias","Pseudotsuga menziesii","(p93665|dcs1_goshi : 181.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (at4g16730 : 168.0) In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides  downstream of the start codon leading to a  frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present.; terpene synthase 02 (TPS02); INVOLVED IN: metabolic process; EXPRESSED IN: sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 03 (TAIR:AT4G16740.1); Has 1736 Blast hits to 1706 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1730; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00028821-RA","No alias","Pseudotsuga menziesii","(at5g08020 : 734.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 1424.0) &  (original description: no original description)","protein_coding"
"PSME_00029410-RA","No alias","Pseudotsuga menziesii","(at5g12950 : 958.0) FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1916.0) &  (original description: no original description)","protein_coding"
"PSME_00030490-RA","No alias","Pseudotsuga menziesii","(p51108|dfra_maize : 138.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (at5g19440 : 137.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00030783-RA","No alias","Pseudotsuga menziesii","(at3g53960 : 552.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 1020.0) &  (original description: no original description)","protein_coding"
"PSME_00031374-RA","No alias","Pseudotsuga menziesii","(p51063|capp_picab : 136.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Picea abies (Norway spruce) (Picea excelsa) & (at2g42600 : 133.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00031733-RA","No alias","Pseudotsuga menziesii","(at5g58490 : 318.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G02400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51104|dfra_diaca : 168.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"PSME_00033478-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 420.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00034013-RA","No alias","Pseudotsuga menziesii","(at3g10840 : 384.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"PSME_00034059-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035315-RA","No alias","Pseudotsuga menziesii","(at5g41040 : 228.0) Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.; HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2973 Blast hits to 2952 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2730; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (o24645|hcbt1_diaca : 136.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00035386-RA","No alias","Pseudotsuga menziesii","(at1g11530 : 124.0) Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.; C-terminal cysteine residue is changed to a serine 1 (CXXS1); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 1 (TAIR:AT3G51030.1); Has 9365 Blast hits to 9347 proteins in 2322 species: Archae - 165; Bacteria - 5071; Metazoa - 947; Fungi - 584; Plants - 1098; Viruses - 0; Other Eukaryotes - 1500 (source: NCBI BLink). & (p29449|trxh1_tobac : 88.6) Thioredoxin H-type 1 (TRX-H1) - Nicotiana tabacum (Common tobacco) & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"PSME_00036094-RA","No alias","Pseudotsuga menziesii","(at2g16910 : 252.0) Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters.; ABORTED MICROSPORES (AMS); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: tapetal layer development, regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, sepal, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G26744.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"PSME_00036402-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 373.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"PSME_00037097-RA","No alias","Pseudotsuga menziesii","(at1g63660 : 464.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 928.0) &  (original description: no original description)","protein_coding"
"PSME_00037324-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00037600-RA","No alias","Pseudotsuga menziesii","(at4g02750 : 501.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 91.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"PSME_00038067-RA","No alias","Pseudotsuga menziesii","(at4g21960 : 500.0) Encodes AT4g21960 (AT4g21960/T8O5_170).; PRXR1; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT2G37130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p00434|perp7_brara : 188.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 1000.0) &  (original description: no original description)","protein_coding"
"PSME_00038451-RA","No alias","Pseudotsuga menziesii","(p10053|rbs_pinth : 290.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (at1g67090 : 225.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"PSME_00038723-RA","No alias","Pseudotsuga menziesii","(at3g55550 : 164.0) Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 119390 Blast hits to 117908 proteins in 4651 species: Archae - 98; Bacteria - 13453; Metazoa - 44108; Fungi - 10128; Plants - 34151; Viruses - 398; Other Eukaryotes - 17054 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00039013-RA","No alias","Pseudotsuga menziesii","(at5g51080 : 98.6) RNase H family protein; FUNCTIONS IN: ribonuclease H activity, nuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Ribonuclease H (InterPro:IPR002156); BEST Arabidopsis thaliana protein match is: RNase H family protein (TAIR:AT1G24090.1); Has 2888 Blast hits to 2881 proteins in 553 species: Archae - 74; Bacteria - 1122; Metazoa - 4; Fungi - 0; Plants - 1278; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"PSME_00039156-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 447.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"PSME_00039319-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 189.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00039582-RA","No alias","Pseudotsuga menziesii","(at3g29770 : 125.0) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.; methyl esterase 11 (MES11); FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 13 (TAIR:AT1G26360.1); Has 2947 Blast hits to 2945 proteins in 736 species: Archae - 12; Bacteria - 1724; Metazoa - 69; Fungi - 61; Plants - 638; Viruses - 1; Other Eukaryotes - 442 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00039853-RA","No alias","Pseudotsuga menziesii","(at4g02780 : 169.0) Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis; GA REQUIRING 1 (GA1); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1979 Blast hits to 1971 proteins in 256 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 61; Plants - 1817; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (o04408|ksa_pea : 160.0) Ent-kaurene synthase A, chloroplast precursor (EC 5.5.1.13) (Ent-copalyl diphosphate synthase) (KSA) - Pisum sativum (Garden pea) & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00039973-RA","No alias","Pseudotsuga menziesii",""(at3g26180 : 192.0) putative cytochrome P450; ""cytochrome P450, family 71, subfamily B, polypeptide 20"" (CYP71B20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 19 (TAIR:AT3G26170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o81973|c93a3_soybn : 167.0) Cytochrome P450 93A3 (EC 1.14.-.-) (P450 CP5) - Glycine max (Soybean) & (reliability: 384.0) &  (original description: no original description)"","protein_coding"
"PSME_00040266-RA","No alias","Pseudotsuga menziesii","(at2g27680 : 402.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"PSME_00040620-RA","No alias","Pseudotsuga menziesii","(at3g04520 : 111.0) Encodes a threonine aldolase, involved in threonine degradation to glycine. Expressed in vascular tissue through out the plant.; threonine aldolase 2 (THA2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aromatic amino acid beta-eliminating lyase/threonine aldolase (InterPro:IPR001597), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: threonine aldolase 1 (TAIR:AT1G08630.4). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00041673-RA","No alias","Pseudotsuga menziesii","(at1g10360 : 195.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink). & (q06398|gstu6_orysa : 189.0) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) - Oryza sativa (Rice) & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00042004-RA","No alias","Pseudotsuga menziesii","(at2g39980 : 95.9) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o24645|hcbt1_diaca : 95.1) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00042186-RA","No alias","Pseudotsuga menziesii","(at5g59440 : 140.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of  263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00042356-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 429.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 280.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00042840-RA","No alias","Pseudotsuga menziesii","(at5g56710 : 181.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT4G26230.1); Has 842 Blast hits to 842 proteins in 260 species: Archae - 2; Bacteria - 0; Metazoa - 430; Fungi - 129; Plants - 169; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (q9mav7|rl31_pangi : 177.0) 60S ribosomal protein L31 - Panax ginseng (Korean ginseng) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00043145-RA","No alias","Pseudotsuga menziesii","(at1g24240 : 155.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT4G11630.1); Has 7931 Blast hits to 7931 proteins in 2663 species: Archae - 0; Bacteria - 5364; Metazoa - 103; Fungi - 54; Plants - 151; Viruses - 0; Other Eukaryotes - 2259 (source: NCBI BLink). & (p82413|rk19_spiol : 95.5) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00043479-RA","No alias","Pseudotsuga menziesii","(p52421|pur2_vigun : 121.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (at1g09830 : 117.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"PSME_00043480-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 106.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 93.2) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00043643-RA","No alias","Pseudotsuga menziesii","(at1g48300 : 96.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"PSME_00043645-RA","No alias","Pseudotsuga menziesii","(p93400|plda1_tobac : 701.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Nicotiana tabacum (Common tobacco) & (at3g15730 : 691.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements.  PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 1382.0) &  (original description: no original description)","protein_coding"
"PSME_00043761-RA","No alias","Pseudotsuga menziesii","(at1g60060 : 281.0) Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00044035-RA","No alias","Pseudotsuga menziesii","(at3g14250 : 157.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00044337-RA","No alias","Pseudotsuga menziesii","(at1g63660 : 461.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"PSME_00044891-RA","No alias","Pseudotsuga menziesii","(at1g77670 : 158.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.3); Has 49407 Blast hits to 49405 proteins in 3078 species: Archae - 1141; Bacteria - 34862; Metazoa - 771; Fungi - 871; Plants - 1354; Viruses - 0; Other Eukaryotes - 10408 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"PSME_00045136-RA","No alias","Pseudotsuga menziesii","(q43077|amo_pea : 198.0) Amine oxidase [copper-containing] precursor (EC 1.4.3.6) - Pisum sativum (Garden pea) & (at1g31690 : 195.0) Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 390.0) &  (original description: no original description)","protein_coding"
"PSME_00045693-RA","No alias","Pseudotsuga menziesii","(at5g14700 : 264.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 4116 Blast hits to 4108 proteins in 752 species: Archae - 4; Bacteria - 797; Metazoa - 69; Fungi - 490; Plants - 1968; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (p51110|dfra_vitvi : 111.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"PSME_00046089-RA","No alias","Pseudotsuga menziesii","(at2g15490 : 237.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (p56725|zox_phavu : 134.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"PSME_00046228-RA","No alias","Pseudotsuga menziesii","(at1g73220 : 459.0) organic cation/carnitine transporter1 (1-Oct); FUNCTIONS IN: carnitine transporter activity, carbohydrate transmembrane transporter activity, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 16805 Blast hits to 16754 proteins in 1584 species: Archae - 351; Bacteria - 7847; Metazoa - 4511; Fungi - 2312; Plants - 1172; Viruses - 0; Other Eukaryotes - 612 (source: NCBI BLink). & (reliability: 918.0) &  (original description: no original description)","protein_coding"
"PSME_00046693-RA","No alias","Pseudotsuga menziesii","(at5g42800 : 287.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51106|dfra_horvu : 286.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Hordeum vulgare (Barley) & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00047947-RA","No alias","Pseudotsuga menziesii","(at1g27480 : 273.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"PSME_00047985-RA","No alias","Pseudotsuga menziesii","(at1g66910 : 310.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66930.1); Has 113951 Blast hits to 112305 proteins in 4393 species: Archae - 178; Bacteria - 12361; Metazoa - 42729; Fungi - 9627; Plants - 32494; Viruses - 324; Other Eukaryotes - 16238 (source: NCBI BLink). & (p17801|kpro_maize : 186.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00048072-RA","No alias","Pseudotsuga menziesii","(at1g09830 : 462.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (p52421|pur2_vigun : 278.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"PSME_00048215-RA","No alias","Pseudotsuga menziesii","(at1g49820 : 329.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00048963-RA","No alias","Pseudotsuga menziesii","(at2g15490 : 216.0) UDP-glycosyltransferase 73B4 (UGT73B4); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B5 (TAIR:AT2G15480.1). & (q43716|ufog_pethy : 163.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00050535-RA","No alias","Pseudotsuga menziesii","(at3g50790 : 190.0) esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00050719-RA","No alias","Pseudotsuga menziesii","(at4g19380 : 511.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 4189 Blast hits to 4124 proteins in 819 species: Archae - 35; Bacteria - 2697; Metazoa - 100; Fungi - 264; Plants - 164; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (reliability: 932.0) &  (original description: no original description)","protein_coding"
"PSME_00051211-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 110.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00051235-RA","No alias","Pseudotsuga menziesii","(p23525|in37_spiol : 400.0) 37 kDa inner envelope membrane protein, chloroplast precursor (E37) - Spinacia oleracea (Spinach) & (at3g63410 : 399.0) Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane.  Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.; ALBINO OR PALE GREEN MUTANT 1 (APG1); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity; INVOLVED IN: plastoquinone biosynthetic process, vitamin E biosynthetic process; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 7919 Blast hits to 7917 proteins in 1885 species: Archae - 394; Bacteria - 5939; Metazoa - 115; Fungi - 139; Plants - 226; Viruses - 0; Other Eukaryotes - 1106 (source: NCBI BLink). & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"PSME_00053729-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 347.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"PSME_00053852-RA","No alias","Pseudotsuga menziesii","(p48489|pp1_orysa : 367.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (at2g39840 : 360.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00054054-RA","No alias","Pseudotsuga menziesii","(at5g17540 : 333.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 171.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00054761-RA","No alias","Pseudotsuga menziesii","(at4g34135 : 234.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p56725|zox_phavu : 153.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00055051-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 281.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 84.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00055242-RA","No alias","Pseudotsuga menziesii","(p52421|pur2_vigun : 229.0) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (Fragment) - Vigna unguiculata (Cowpea) & (at1g09830 : 226.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00055319-RA","No alias","Pseudotsuga menziesii","(at5g17540 : 344.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase (TAIR:AT3G03480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24645|hcbt1_diaca : 172.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 688.0) &  (original description: no original description)","protein_coding"
"PSME_00055490-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00055951-RA","No alias","Pseudotsuga menziesii","(at1g02260 : 461.0) Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink). & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"PSME_00056214-RA","No alias","Pseudotsuga menziesii","(at3g52500 : 210.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 2297 Blast hits to 2281 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 122; Plants - 1871; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00056558-RA","No alias","Pseudotsuga menziesii","(at1g12775 : 297.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 249.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"Seita.1G008600.1","No alias","Setaria italica ","plastidic signal peptidase *(PLSP/TPP)","protein_coding"
"Seita.1G097900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G136500.1","No alias","Setaria italica ","tyrosine aminotransferase *(TAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Seita.1G139100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G230200.1","No alias","Setaria italica ","nucleotide exchange factor *(CGE)","protein_coding"
"Seita.1G288900.1","No alias","Setaria italica ","ornithine carbamoyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Seita.1G308000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G336500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G158100.1","No alias","Setaria italica ","splicing factor *(CRR16)","protein_coding"
"Seita.2G223900.1","No alias","Setaria italica ","10-formyl-THF synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.2G227200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G250400.1","No alias","Setaria italica ","ATP phosphoribosyl transferase & EC_2.4 glycosyltransferase","protein_coding"
"Seita.2G357100.1","No alias","Setaria italica ","LRR-I protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G374500.1","No alias","Setaria italica ","stability factor *(PPR10)","protein_coding"
"Seita.2G390500.1","No alias","Setaria italica ","LL-diaminopimelate aminotransferase","protein_coding"
"Seita.3G007700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G034700.1","No alias","Setaria italica ","EC_3.1 hydrolase acting on ester bond","protein_coding"
"Seita.3G042700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G105400.1","No alias","Setaria italica ","initiation factor *(MFP1)","protein_coding"
"Seita.3G126200.1","No alias","Setaria italica ","cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)","protein_coding"
"Seita.3G143300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G249800.1","No alias","Setaria italica ","phosphoribosyl-formimino-AICAR-phosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Seita.3G250000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G253600.1","No alias","Setaria italica ","plastidial ribosome biogenesis factor *(PAC)","protein_coding"
"Seita.3G286400.1","No alias","Setaria italica ","EC_2.1 transferase transferring one-carbon group & tRNA guanine-methyltransferase *(TRM1)","protein_coding"
"Seita.3G286500.1","No alias","Setaria italica ","manganese superoxide dismutase *(MSD)","protein_coding"
"Seita.3G302400.1","No alias","Setaria italica ","beta-galactosidase *(BGAL9) & EC_3.2 glycosylase","protein_coding"
"Seita.3G370100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G026900.1","No alias","Setaria italica ","16S-rRNA maturation factor *(RBF1)","protein_coding"
"Seita.4G083100.1","No alias","Setaria italica ","EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Seita.4G101200.1","No alias","Setaria italica ","fructose kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G104400.1","No alias","Setaria italica ","regulatory protein *(Emb506) of embryogenesis","protein_coding"
"Seita.4G136300.1","No alias","Setaria italica ","nascent polypeptide chaperone *(TIG)","protein_coding"
"Seita.4G196700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G054400.1","No alias","Setaria italica ","histidinol-phosphate phosphatase","protein_coding"
"Seita.5G148400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G228200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G229000.1","No alias","Setaria italica ","mRNA helicase *(RH31)","protein_coding"
"Seita.5G269000.1","No alias","Setaria italica ","assembly factor CRR41 involved in NDH complex assembly","protein_coding"
"Seita.5G324000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G350300.1","No alias","Setaria italica ","AP-endonuclease *(ARP) & EC_4.2 carbon-oxygen lyase","protein_coding"
"Seita.5G367000.1","No alias","Setaria italica ","regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity","protein_coding"
"Seita.5G406900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G416700.1","No alias","Setaria italica ","recombinase *(RecA)","protein_coding"
"Seita.5G465700.1","No alias","Setaria italica ","component *(Sm-D2) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Seita.6G024600.1","No alias","Setaria italica ","methionyl aminopeptidase *(MAP1) & methionyl aminopeptidase *(MAP1) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.6G077900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G101000.1","No alias","Setaria italica ","regulatory co-factor *(RRP47) of RRP6L exoribonuclease activity","protein_coding"
"Seita.6G156600.1","No alias","Setaria italica ","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Seita.6G204600.1","No alias","Setaria italica ","TrmL-type tRNA methyltransferase","protein_coding"
"Seita.6G252600.1","No alias","Setaria italica ","broad substrate-specificity aminopeptidase *(MPA1)","protein_coding"
"Seita.7G128500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G150000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G293800.1","No alias","Setaria italica ","RNA editing factor *(REME2/PGL1)","protein_coding"
"Seita.8G049100.1","No alias","Setaria italica ","long-chain acyl-CoA synthetase *(LACS9) & EC_6.2 ligase forming carbon-sulfur bond","protein_coding"
"Seita.8G084700.1","No alias","Setaria italica ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.9G026500.1","No alias","Setaria italica ","mTERF-type transcription factor","protein_coding"
"Seita.9G060500.1","No alias","Setaria italica ","plastidial protease *(EGY)","protein_coding"
"Seita.9G123900.1","No alias","Setaria italica ","iron superoxide dismutase *(FSD)","protein_coding"
"Seita.9G172700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G193800.1","No alias","Setaria italica ","splicing factor *(CFM4)","protein_coding"
"Seita.9G221400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G344400.1","No alias","Setaria italica ","protein involved in PS-II assembly *(PAM68)","protein_coding"
"Seita.9G376100.1","No alias","Setaria italica ","alpha-helical heme oxygenase *(HO)","protein_coding"
"Seita.9G536900.1","No alias","Setaria italica ","plastidial rRNA pseudouridine synthase *(SVR1)","protein_coding"
"Sobic.001G079900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G092200.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G107200.1","No alias","Sorghum bicolor ","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Sobic.001G110300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G114400.1","No alias","Sorghum bicolor ","formylglycinamidine RN synthase *(PUR4) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G120500.1","No alias","Sorghum bicolor ","component *(Toc64-III) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G126600.1","No alias","Sorghum bicolor ","component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex","protein_coding"
"Sobic.001G196700.1","No alias","Sorghum bicolor ","S28-class carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.001G211500.1","No alias","Sorghum bicolor ","DNA ligase *(LIG1) & DNA replication DNA ligase *(LIG1) & EC_6.5 ligase forming phosphoric ester bond","protein_coding"
"Sobic.001G267800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G282200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G352900.1","No alias","Sorghum bicolor ","component *(MAC7)  of MAC spliceosome-associated complex","protein_coding"
"Sobic.001G373000.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP93)","protein_coding"
"Sobic.001G396300.1","No alias","Sorghum bicolor ","regulatory protein *(CP12) of GAPDH activity","protein_coding"
"Sobic.001G409500.1","No alias","Sorghum bicolor ","substrate adaptor *(ABD1)","protein_coding"
"Sobic.001G433100.3","No alias","Sorghum bicolor ","chaperone of protochlorophyllide oxidoreductase *(DAY) & chaperone of protochlorophyllide oxidoreductase *(CPP1)","protein_coding"
"Sobic.001G449300.1","No alias","Sorghum bicolor ","LysM receptor kinase *(NFR5/NFP) & LysM protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G485600.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.001G486600.1","No alias","Sorghum bicolor ","component *(RFC4) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.001G486700.1","No alias","Sorghum bicolor ","adenylosuccinate synthetase *(PUR11) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G502600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G005000.1","No alias","Sorghum bicolor ","SSU processome assembly factor *(UTP6)","protein_coding"
"Sobic.002G007100.1","No alias","Sorghum bicolor ","poly-P/G elongation factor *(eEF5/eIF5A))","protein_coding"
"Sobic.002G046400.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.002G051600.1","No alias","Sorghum bicolor ","assembly factor MMS19 of cytosolic CIA system transfer phase","protein_coding"
"Sobic.002G066800.1","No alias","Sorghum bicolor ","multifunctional tRNA ligase *(RLG1)","protein_coding"
"Sobic.002G276000.1","No alias","Sorghum bicolor ","histone *(H2A)","protein_coding"
"Sobic.002G290100.1","No alias","Sorghum bicolor ","component *(MLH3) of MutLy endonuclease heterodimer","protein_coding"
"Sobic.002G312700.1","No alias","Sorghum bicolor ","recruiting factor *(VETH) of Exocyst complex","protein_coding"
"Sobic.002G315800.3","No alias","Sorghum bicolor ","C1-class subclass CTB cysteine protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.002G317200.1","No alias","Sorghum bicolor ","tRNA wybutosine biosynthesis enzyme *(TYW2/TYW3)","protein_coding"
"Sobic.002G331000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G337700.1","No alias","Sorghum bicolor ","ABC1 atypical protein kinase","protein_coding"
"Sobic.002G339300.1","No alias","Sorghum bicolor ","class VIII myosin microfilament-based motor protein","protein_coding"
"Sobic.002G363500.2","No alias","Sorghum bicolor ","TrmH-type tRNA methyltransferase","protein_coding"
"Sobic.002G378900.4","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"Sobic.002G386900.7","No alias","Sorghum bicolor ","TruD-type tRNA pseudouridine synthase","protein_coding"
"Sobic.003G001400.1","No alias","Sorghum bicolor ","component *(NSE5) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.003G028600.2","No alias","Sorghum bicolor ","aminoimidazole RN carboxylase *(PUR6)","protein_coding"
"Sobic.003G051500.2","No alias","Sorghum bicolor ","group-II intron mitochondrial splicing factor *(MISF26)","protein_coding"
"Sobic.003G126400.2","No alias","Sorghum bicolor ","Holliday junction resolvase *(MOC1)","protein_coding"
"Sobic.003G129400.1","No alias","Sorghum bicolor ","xylosyltransferase *(IRX9) & EC_2.4 glycosyltransferase","protein_coding"
"Sobic.003G206800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G286300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G304500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G306900.2","No alias","Sorghum bicolor ","dCMP deaminase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Sobic.003G325900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G330900.1","No alias","Sorghum bicolor ","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.003G361400.1","No alias","Sorghum bicolor ","nucleoporin of nuclear pore complex *(NUP62)","protein_coding"
"Sobic.003G420000.1","No alias","Sorghum bicolor ","RNA editing factor *(MEF11)","protein_coding"
"Sobic.003G442200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G038100.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Sobic.004G067500.3","No alias","Sorghum bicolor ","component *(NSE6/SNI1) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.004G087500.1","No alias","Sorghum bicolor ","ATP","protein_coding"
"Sobic.004G184900.1","No alias","Sorghum bicolor ","splicing factor *(WSL4)","protein_coding"
"Sobic.004G213100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G260100.2","No alias","Sorghum bicolor ","regulatory protein *(FRIENDLY) of mitochondrion division","protein_coding"
"Sobic.004G265900.1","No alias","Sorghum bicolor ","small subunit *(CarA) of carbamoyl phosphate synthetase heterodimer & small subunit of carbamoyl phosphate synthetase heterodimer & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.004G321800.2","No alias","Sorghum bicolor ","bifunctional lysine ketoglutarate reductase and saccharopine dehydrogenase & EC_1.5 oxidoreductase acting on CH-NH group of donor","protein_coding"
"Sobic.005G012800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G026900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G059200.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G090900.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.006G010400.1","No alias","Sorghum bicolor ","tRNA dihydrouridine synthase","protein_coding"
"Sobic.006G024500.1","No alias","Sorghum bicolor ","regulatory protein *(LEJ1/2) of thiol-based redox regulation","protein_coding"
"Sobic.006G025000.2","No alias","Sorghum bicolor ","TCP-type transcription factor","protein_coding"
"Sobic.006G047900.1","No alias","Sorghum bicolor ","dynamin-like protein *(DRP3)","protein_coding"
"Sobic.006G058800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & glycine-tRNA ligase","protein_coding"
"Sobic.006G083300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G083400.1","No alias","Sorghum bicolor ","protein disulfide isomerase *(PDI-B)","protein_coding"
"Sobic.006G097600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G106200.1","No alias","Sorghum bicolor ","histone chaperone *(NRP)","protein_coding"
"Sobic.006G146900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G170200.3","No alias","Sorghum bicolor ","N-acetylglutamate kinase","protein_coding"
"Sobic.006G180600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G204100.1","No alias","Sorghum bicolor ","RNA editing factor *(MORF)","protein_coding"
"Sobic.006G212000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G228700.1","No alias","Sorghum bicolor ","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G231800.2","No alias","Sorghum bicolor ","component *(MRE11) of MRE11-RAD50-NBS1 (MRN) complex & component *(MRE11) of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Sobic.006G233800.1","No alias","Sorghum bicolor ","EC_2.3 acyltransferase","protein_coding"
"Sobic.006G259401.1","No alias","Sorghum bicolor ","immunity suppressor (SOBER/TIPSY) of effector-triggered immunity (ETI) network & protein deacetylasen *(TIPSY)","protein_coding"
"Sobic.006G266700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G068100.1","No alias","Sorghum bicolor ","aconitase *(ACO) & aconitase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Sobic.007G091400.1","No alias","Sorghum bicolor ","diacylglycerol kinase","protein_coding"
"Sobic.007G097400.4","No alias","Sorghum bicolor ","small subunit *(NRPC15) of TFIIIf transcription factor module","protein_coding"
"Sobic.007G134800.1","No alias","Sorghum bicolor ","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Sobic.007G145100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G171200.1","No alias","Sorghum bicolor ","hydroxy-tetrahydrodihydrodipicolinate reductase","protein_coding"
"Sobic.007G179900.2","No alias","Sorghum bicolor ","6-phosphogluconolactonase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.007G195100.1","No alias","Sorghum bicolor ","beta-type-6 component *(PBF) of 26S proteasome","protein_coding"
"Sobic.007G200900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G202800.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.007G208000.1","No alias","Sorghum bicolor ","subunit beta of RAB-GTPase geranylgeranyltransferase (RGT) complex","protein_coding"
"Sobic.008G012800.2","No alias","Sorghum bicolor ","GRAS-type transcription factor","protein_coding"
"Sobic.008G016700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G017200.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(ALADIN)","protein_coding"
"Sobic.008G037800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G051200.1","No alias","Sorghum bicolor ","co-chaperone (GFA2) involved in gametogenesis & co-chaperone *(Hsp40)","protein_coding"
"Sobic.008G056900.1","No alias","Sorghum bicolor ","component *(RFC4) of PCNA sliding clamp loader complex","protein_coding"
"Sobic.008G062200.1","No alias","Sorghum bicolor ","subunit alpha of E1 subcomplex of 2-oxoisovalerate dehydrogenase complex & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.008G069500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G070350.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.008G171700.1","No alias","Sorghum bicolor ","component *(ORC3) of origin recognition complex","protein_coding"
"Sobic.008G172200.1","No alias","Sorghum bicolor ","TCP-type transcription factor","protein_coding"
"Sobic.008G187300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G010300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G020200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G036300.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.009G043500.1","No alias","Sorghum bicolor ","sulfite oxidase & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Sobic.009G070400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G072000.1","No alias","Sorghum bicolor ","aminoimidazole RN synthetase *(PUR5)","protein_coding"
"Sobic.009G083800.1","No alias","Sorghum bicolor ","R1R2R3-MYB transcription factor & mobile transcription factor *(MYB3R1)","protein_coding"
"Sobic.009G105400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G141400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G167100.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.009G183500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G205000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G214200.1","No alias","Sorghum bicolor ","glycinamide RN synthetase *(GARS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.009G233800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G235000.1","No alias","Sorghum bicolor ","pre-40S ribosomal subunit assembly factor *(RID3)","protein_coding"
"Sobic.009G238100.2","No alias","Sorghum bicolor ","plastidial RNA basal splicing factor *(WTF1)","protein_coding"
"Sobic.009G241200.3","No alias","Sorghum bicolor ","RNA editing factor *(ECB2/VAC1)","protein_coding"
"Sobic.009G253400.1","No alias","Sorghum bicolor ","regulatory protein *(RGG) of mRNA quality control","protein_coding"
"Sobic.010G024500.1","No alias","Sorghum bicolor ","LRR-IV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G053600.3","No alias","Sorghum bicolor ","protein factor *(PRPF8/SUS2) of MAC spliceosome-associated complex","protein_coding"
"Sobic.010G075600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G080900.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.010G082500.1","No alias","Sorghum bicolor ","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Sobic.010G084900.1","No alias","Sorghum bicolor ","LysM protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G097500.1","No alias","Sorghum bicolor ","DNA polymerase lambda *(POLL)","protein_coding"
"Sobic.010G114900.1","No alias","Sorghum bicolor ","nucleocytoplasmic import karyopherin *(IMB5)","protein_coding"
"Sobic.010G206300.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & isoleucine-tRNA ligase","protein_coding"
"Sobic.010G224700.1","No alias","Sorghum bicolor ","DNA primase and helicase *(TWINKLE)","protein_coding"
"Sobic.010G241600.3","No alias","Sorghum bicolor ","subunit A of ribonuclease H2 complex","protein_coding"
"Sobic.010G268200.1","No alias","Sorghum bicolor ","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"Solyc01g006450","No alias","Solanum lycopersicum","Enoyl reductase (AHRD V3.3 *** P93062_BRANA)","protein_coding"
"Solyc01g058190","No alias","Solanum lycopersicum","30S ribosomal protein S6 (AHRD V3.3 *** W9RJT9_9ROSA)","protein_coding"
"Solyc01g080300","No alias","Solanum lycopersicum","cobalt ion transmembrane transporter (AHRD V3.3 *** AT3G21580.1)","protein_coding"
"Solyc01g081150","No alias","Solanum lycopersicum","DNA-directed RNA polymerases I, II, and III subunit rpabc3 (AHRD V3.3 *** W9RLU0_9ROSA)","protein_coding"
"Solyc01g081300","No alias","Solanum lycopersicum","Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (AHRD V3.3 *** PUR7_ARATH)","protein_coding"
"Solyc01g081520","No alias","Solanum lycopersicum","30S ribosomal S2 (AHRD V3.3 *** A0A0B0MLM4_GOSAR)","protein_coding"
"Solyc01g096480","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g103440","No alias","Solanum lycopersicum","Phosphoribosylamine-glycine ligase (AHRD V3.3 *** G7K3Z1_MEDTR)","protein_coding"
"Solyc01g107330","No alias","Solanum lycopersicum","SWIB_MDM2 domain protein","protein_coding"
"Solyc02g023970","No alias","Solanum lycopersicum","Obg-like ATPase 1 (AHRD V3.3 *** K4B546_SOLLC)","protein_coding"
"Solyc02g032960","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g032970","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0B0PX39_GOSAR)","protein_coding"
"Solyc02g049070","No alias","Solanum lycopersicum","4-coumarate:CoA ligase (AHRD V3.3 --* O81139_POPTM)","protein_coding"
"Solyc02g062350","No alias","Solanum lycopersicum","DnaJ, mitochondrial (AHRD V3.3 *** A0A0B0PT99_GOSAR)","protein_coding"
"Solyc02g065370","No alias","Solanum lycopersicum","UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (AHRD V3.3 *** A0A0B0MSS3_GOSAR)","protein_coding"
"Solyc02g070390","No alias","Solanum lycopersicum","plastid transcriptionally active 12 (AHRD V3.3 *** AT2G34640.1)","protein_coding"
"Solyc02g085520","No alias","Solanum lycopersicum","Adenylosuccinate synthetase, chloroplastic (AHRD V3.3 *** PURA_SOLBU)","protein_coding"
"Solyc02g091970","No alias","Solanum lycopersicum","SlBCAT3","protein_coding"
"Solyc03g031560","No alias","Solanum lycopersicum","Trimeric LpxA-like enzymes superfamily protein, putative isoform 3 (AHRD V3.3 *** A0A061GGP4_THECC)","protein_coding"
"Solyc03g095180","No alias","Solanum lycopersicum","Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC)","protein_coding"
"Solyc03g095760","No alias","Solanum lycopersicum","Rhodanese-like domain-containing protein (AHRD V3.3 *** A0A124SGQ2_CYNCS)","protein_coding"
"Solyc03g111050","No alias","Solanum lycopersicum","CONSTANS interacting protein 5","protein_coding"
"Solyc03g112070","No alias","Solanum lycopersicum","P1B-type ATPase 4 (AHRD V3.3 --* Q2I7E8_ARAHA)","protein_coding"
"Solyc03g118680","No alias","Solanum lycopersicum","Zinc finger protein (AHRD V3.3 *** W9RJ16_9ROSA)","protein_coding"
"Solyc03g118690","No alias","Solanum lycopersicum","Translocon at the outer membrane of chloroplasts 64 (AHRD V3.3 *** TOC64_PEA)","protein_coding"
"Solyc03g120230","No alias","Solanum lycopersicum","MAR-binding filament-like protein 1 (AHRD V3.3 *** MFP1_SOLLC)","protein_coding"
"Solyc03g120850","No alias","Solanum lycopersicum","Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)","protein_coding"
"Solyc04g005630","No alias","Solanum lycopersicum","Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G02990.2)","protein_coding"
"Solyc04g011700","No alias","Solanum lycopersicum","Mitochondrial transcription termination factor family protein, putative (AHRD V3.3 *** A0A061DIZ3_THECC)","protein_coding"
"Solyc04g026200","No alias","Solanum lycopersicum","Ubiquitin-like-specific protease 1D (AHRD V3.3 *-* ULP1D_ARATH)","protein_coding"
"Solyc04g026270","No alias","Solanum lycopersicum","S3 self-incompatibility locus-linked pollen 3.15 protein (AHRD V3.3 *-* Q7XAE6_PETIN)","protein_coding"
"Solyc04g050540","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9S7Q8_RICCO)","protein_coding"
"Solyc04g054460","No alias","Solanum lycopersicum","Glycine-rich family protein (AHRD V3.3 *** B9MTF6_POPTR)","protein_coding"
"Solyc04g063360","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH (AHRD V3.3 *** W9S040_9ROSA)","protein_coding"
"Solyc04g074630","No alias","Solanum lycopersicum","Seryl-tRNA synthetase (AHRD V3.3 *** AT1G11870.2)","protein_coding"
"Solyc04g080900","No alias","Solanum lycopersicum","GTPase obg (AHRD V3.3 *** A0A0B0PU27_GOSAR)","protein_coding"
"Solyc04g082310","No alias","Solanum lycopersicum","TSA: Wollemia nobilis Ref_Wollemi_Transcript_29242_1275 transcribed RNA sequence (AHRD V3.3 *** A0A0C9S3G2_9SPER)","protein_coding"
"Solyc05g006110","No alias","Solanum lycopersicum","Serine/Threonine-kinase (AHRD V3.3 *** AT1G10522.2)","protein_coding"
"Solyc05g006130","No alias","Solanum lycopersicum","RNA helicase DEAD17","protein_coding"
"Solyc05g006170","No alias","Solanum lycopersicum","Lycopersicon esculentum Chloroplast Envelope Protein 1","protein_coding"
"Solyc05g012270","No alias","Solanum lycopersicum","Argininosuccinate synthase (AHRD V3.3 *** K4BXV0_SOLLC)","protein_coding"
"Solyc05g055350","No alias","Solanum lycopersicum","Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR)","protein_coding"
"Solyc06g008220","No alias","Solanum lycopersicum","DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR)","protein_coding"
"Solyc06g060260","No alias","Solanum lycopersicum","stromal ascorbate peroxidase 7","protein_coding"
"Solyc07g005870","No alias","Solanum lycopersicum","FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** AT4G30720.1)","protein_coding"
"Solyc07g006530","No alias","Solanum lycopersicum","Adenylosuccinate lyase (AHRD V3.3 *** K4CBC4_SOLLC)","protein_coding"
"Solyc07g008350","No alias","Solanum lycopersicum","voltage-dependent anion channel protein","protein_coding"
"Solyc07g018350","No alias","Solanum lycopersicum","Mismatch repair protein (AHRD V3.3 *** D6QY21_SOLLC)","protein_coding"
"Solyc07g049230","No alias","Solanum lycopersicum","RmlC-like cupins superfamily protein (AHRD V3.3 *** AT2G32650.2)","protein_coding"
"Solyc07g053470","No alias","Solanum lycopersicum","elongation factor family protein (AHRD V3.3 *** AT2G31060.2)","protein_coding"
"Solyc07g062930","No alias","Solanum lycopersicum","protein methyltransferase PrmA-like","protein_coding"
"Solyc07g064280","No alias","Solanum lycopersicum","Tryptophan synthase (AHRD V3.3 *** K4CHA9_SOLLC)","protein_coding"
"Solyc07g065610","No alias","Solanum lycopersicum","Clade XIV lectin receptor kinase (AHRD V3.3 *** K4CHN9_SOLLC)","protein_coding"
"Solyc08g008350","No alias","Solanum lycopersicum","ribosome maturation factor (AHRD V3.3 *** AT4G10970.7),Pfam:PF07078","protein_coding"
"Solyc08g014020","No alias","Solanum lycopersicum","ER protein carbohydrate-binding protein (AHRD V3.3 --* AT1G24485.1)","protein_coding"
"Solyc08g075160","No alias","Solanum lycopersicum","Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A0B2PXS6_GLYSO)","protein_coding"
"Solyc08g078490","No alias","Solanum lycopersicum","formyltetrahydrofolate deformylase (AHRD V3.3 *** AT5G47435.2)","protein_coding"
"Solyc08g080240","No alias","Solanum lycopersicum","NADH dehydrogenase 1 alpha subcomplex subunit 8 (AHRD V3.3 *** A0A0K9PKB1_ZOSMR)","protein_coding"
"Solyc08g081080","No alias","Solanum lycopersicum","structural maintenance of chromosomes-like protein, putative (DUF3531) (AHRD V3.3 *** AT5G08400.2)","protein_coding"
"Solyc08g081890","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR)","protein_coding"
"Solyc09g064790","No alias","Solanum lycopersicum","pale cress protein (PAC) (AHRD V3.3 *** AT2G48120.1)","protein_coding"
"Solyc09g075000","No alias","Solanum lycopersicum","Transducin/WD40 repeat protein (AHRD V3.3 *** G7LCS5_MEDTR)","protein_coding"
"Solyc10g008600","No alias","Solanum lycopersicum","embryo defective 1923 (AHRD V3.3 *** AT4G28210.1)","protein_coding"
"Solyc10g079250","No alias","Solanum lycopersicum","DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC)","protein_coding"
"Solyc10g079290","No alias","Solanum lycopersicum","Outer envelope protein 80, chloroplastic (AHRD V3.3 *** OEP80_ARATH)","protein_coding"
"Solyc10g080040","No alias","Solanum lycopersicum","Ribonuclease III family protein (AHRD V3.3 *-* AT4G37510.1)","protein_coding"
"Solyc10g081240","No alias","Solanum lycopersicum","GrpE protein homolog (AHRD V3.3 *** K4D311_SOLLC)","protein_coding"
"Solyc10g081420","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR)","protein_coding"
"Solyc11g008940","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118K217_CYNCS)","protein_coding"
"Solyc11g013440","No alias","Solanum lycopersicum","Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4D6E8_SOLLC)","protein_coding"
"Solyc11g018720","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g019930","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT1G35625.1)","protein_coding"
"Solyc11g020300","No alias","Solanum lycopersicum","Protein TIC 40, chloroplastic (AHRD V3.3 *** TIC40_PEA)","protein_coding"
"Solyc11g040390","No alias","Solanum lycopersicum","Aspartokinase-homoserine dehydrogenase (AHRD V3.3 *** O65027_SOYBN)","protein_coding"
"Solyc11g042880","No alias","Solanum lycopersicum","Late embryogenesis abundant protein (AHRD V3.3 *** A0A072UNH6_MEDTR)","protein_coding"
"Solyc11g067300","No alias","Solanum lycopersicum","ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)","protein_coding"
"Solyc12g011270","No alias","Solanum lycopersicum","ethylene-responsive elongation factor EF-Ts precursor","protein_coding"
"Solyc12g098990","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RZZ6_RICCO)","protein_coding"
"Sopen01g045790","No alias","Solanum pennellii","Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain","protein_coding"