"sequence_id","alias","species","description","type" "Kfl00001_0640","kfl00001_0640_v1.1","Klebsormidium nitens","(at5g08470 : 373.0) an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.; peroxisome 1 (PEX1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress; LOCATED IN: peroxisome; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Aspartate decarboxylase-like fold (InterPro:IPR009010), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peroxisome biogenesis factor 1, N-terminal (InterPro:IPR015342); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 45022 Blast hits to 26157 proteins in 3042 species: Archae - 1897; Bacteria - 15808; Metazoa - 7500; Fungi - 5597; Plants - 4311; Viruses - 29; Other Eukaryotes - 9880 (source: NCBI BLink). & (p54774|cdc48_soybn : 196.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 746.0) & (original description: no original description)","protein_coding" "Kfl00004_0260","kfl00004_0260_v1.1","Klebsormidium nitens","(at2g46560 : 295.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), RAVE protein 1 C-terminal (InterPro:IPR022033), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 2273 Blast hits to 1588 proteins in 291 species: Archae - 0; Bacteria - 657; Metazoa - 469; Fungi - 690; Plants - 137; Viruses - 0; Other Eukaryotes - 320 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)","protein_coding" "Kfl00004_0290","kfl00004_0290_v1.1","Klebsormidium nitens","(at2g26780 : 682.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 448 Blast hits to 380 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 190; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 1364.0) & (original description: no original description)","protein_coding" "Kfl00004_0450","kfl00004_0450_v1.1","Klebsormidium nitens","(at4g36090 : 252.0) oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)","protein_coding" "Kfl00005_0110","kfl00005_0110_v1.1","Klebsormidium nitens","(at1g08190 : 867.0) Might be involved in protein sorting to the vacuole.; vacuolar protein sorting 41 (VPS41); FUNCTIONS IN: binding, nucleotide binding, zinc ion binding; INVOLVED IN: gravitropism, protein targeting to vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4; Bacteria - 340; Metazoa - 7814; Fungi - 1141; Plants - 584; Viruses - 346; Other Eukaryotes - 3059 (source: NCBI BLink). & (reliability: 1734.0) & (original description: no original description)","protein_coding" "Kfl00010_0530","kfl00010_0530_v1.1","Klebsormidium nitens","(at1g48420 : 461.0) Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.; D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)","protein_coding" "Kfl00013_0230","kfl00013_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00016_0440","kfl00016_0440_v1.1","Klebsormidium nitens","(at4g21710 : 1847.0) Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.; NRPB2; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C2 (TAIR:AT5G45140.1); Has 37546 Blast hits to 27868 proteins in 9192 species: Archae - 496; Bacteria - 17572; Metazoa - 623; Fungi - 7193; Plants - 3397; Viruses - 232; Other Eukaryotes - 8033 (source: NCBI BLink). & (q9mus5|rpob_mesvi : 174.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (reliability: 3694.0) & (original description: no original description)","protein_coding" "Kfl00017_0310","kfl00017_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00018_0450","kfl00018_0450_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00020_0330","kfl00020_0330_v1.1","Klebsormidium nitens","(at5g54440 : 445.0) Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis.; CLUB (CLUB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3758 (InterPro:IPR022233); Has 362 Blast hits to 266 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 118; Plants - 63; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 890.0) & (original description: no original description)","protein_coding" "Kfl00024_0030","kfl00024_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00031_0380","kfl00031_0380_v1.1","Klebsormidium nitens","(at2g43250 : 101.0) unknown protein; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)","protein_coding" "Kfl00035_0180","kfl00035_0180_v1.1","Klebsormidium nitens","(at1g56440 : 86.3) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1). & (reliability: 171.0) & (original description: no original description)","protein_coding" "Kfl00041_0270","kfl00041_0270_v1.1","Klebsormidium nitens","(at1g11950 : 252.0) Transcription factor jumonji (jmjC) domain-containing protein; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Transcription factor jumonji (InterPro:IPR013129); BEST Arabidopsis thaliana protein match is: transcription factor jumonji (jmjC) domain-containing protein (TAIR:AT1G62310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "Kfl00047_0010","kfl00047_0010_v1.1","Klebsormidium nitens","(at3g33530 : 594.0) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1). & (reliability: 1188.0) & (original description: no original description)","protein_coding" "Kfl00052_0360","kfl00052_0360_v1.1","Klebsormidium nitens","(at4g15180 : 131.0) SET domain protein 2 (SDG2); EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) & (original description: no original description)","protein_coding" "Kfl00055_0110","kfl00055_0110_v1.1","Klebsormidium nitens","(at4g02480 : 607.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (q96372|cdc48_capan : 188.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1214.0) & (original description: no original description)","protein_coding" "Kfl00055_0280","kfl00055_0280_v1.1","Klebsormidium nitens","(at5g24740 : 506.0) EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). & (reliability: 1012.0) & (original description: no original description)","protein_coding" "Kfl00058_0070","kfl00058_0070_v1.1","Klebsormidium nitens","(at1g48950 : 195.0) C3HC zinc finger-like ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC-like (InterPro:IPR012935); BEST Arabidopsis thaliana protein match is: IAP-like protein 1 (TAIR:AT1G17210.1); Has 249 Blast hits to 238 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 80; Plants - 75; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description)","protein_coding" "Kfl00061_0100","kfl00061_0100_v1.1","Klebsormidium nitens","(at5g17270 : 343.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G37130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 686.0) & (original description: no original description)","protein_coding" "Kfl00067_0150","kfl00067_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00068_0290","kfl00068_0290_v1.1","Klebsormidium nitens","(at4g00060 : 184.0) maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)","protein_coding" "Kfl00069_0240","kfl00069_0240_v1.1","Klebsormidium nitens","(at3g02680 : 157.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and MRE11; nijmegen breakage syndrome 1 (NBS1); CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); Has 164 Blast hits to 161 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 112; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 314.0) & (original description: no original description)","protein_coding" "Kfl00081_0320","kfl00081_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00082_0190","kfl00082_0190_v1.1","Klebsormidium nitens","(at3g04740 : 266.0) encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.; STRUWWELPETER (SWP); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: positive regulation of transcription, positive regulation of cell proliferation; LOCATED IN: mediator complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med14 (InterPro:IPR013947); Has 940 Blast hits to 375 proteins in 163 species: Archae - 0; Bacteria - 61; Metazoa - 117; Fungi - 104; Plants - 74; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description)","protein_coding" "Kfl00085_0310","kfl00085_0310_v1.1","Klebsormidium nitens","(at5g51230 : 92.4) Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.; EMBRYONIC FLOWER 2 (EMF2); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 184.8) & (original description: no original description)","protein_coding" "Kfl00086_0350","kfl00086_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00088_g15","kfl00088_g15_v1.1","Klebsormidium nitens","(at3g04530 : 84.7) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.; phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)","protein_coding" "Kfl00093_0170","kfl00093_0170_v1.1","Klebsormidium nitens","(at1g15220 : 126.0) Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.; CCMH; CONTAINS InterPro DOMAIN/s: Cytochrome C biogenesis protein CcmH (InterPro:IPR005616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 252.0) & (original description: no original description)","protein_coding" "Kfl00097_0370","kfl00097_0370_v1.1","Klebsormidium nitens","(at5g07740 : 95.1) actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1). & (reliability: 190.2) & (original description: no original description)","protein_coding" "Kfl00102_0100","kfl00102_0100_v1.1","Klebsormidium nitens","(at1g20960 : 2806.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 5612.0) & (original description: no original description)","protein_coding" "Kfl00102_0230","kfl00102_0230_v1.1","Klebsormidium nitens","(at1g35530 : 555.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (reliability: 1110.0) & (original description: no original description)","protein_coding" "Kfl00123_0100","kfl00123_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00127_0150","kfl00127_0150_v1.1","Klebsormidium nitens","(at5g05560 : 589.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1178.0) & (original description: no original description)","protein_coding" "Kfl00133_0070","kfl00133_0070_v1.1","Klebsormidium nitens","(at2g48060 : 875.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 1750.0) & (original description: no original description)","protein_coding" "Kfl00146_0200","kfl00146_0200_v1.1","Klebsormidium nitens","(at5g18420 : 274.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 548.0) & (original description: no original description)","protein_coding" "Kfl00156_0250","kfl00156_0250_v1.1","Klebsormidium nitens","(at3g05040 : 265.0) Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species.; HASTY (HST); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 520 Blast hits to 417 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 183; Plants - 102; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "Kfl00160_0100","kfl00160_0100_v1.1","Klebsormidium nitens","(at3g55160 : 416.0) unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 832.0) & (original description: no original description)","protein_coding" "Kfl00166_0050","kfl00166_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00177_0020","kfl00177_0020_v1.1","Klebsormidium nitens","(at3g52780 : 461.0) PAP20; FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 22 (TAIR:AT3G52820.1); Has 2133 Blast hits to 2115 proteins in 453 species: Archae - 1; Bacteria - 782; Metazoa - 195; Fungi - 75; Plants - 759; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (q09131|ppaf_soybn : 299.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 922.0) & (original description: no original description)","protein_coding" "Kfl00178_0020","kfl00178_0020_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00192_0160","kfl00192_0160_v1.1","Klebsormidium nitens","(at4g36080 : 4007.0) phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1). & (q5z987|atr_orysa : 83.6) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 8014.0) & (original description: no original description)","protein_coding" "Kfl00194_0100","kfl00194_0100_v1.1","Klebsormidium nitens","(at5g16210 : 619.0) HEAT repeat-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), LisH dimerisation motif (InterPro:IPR006594), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1238.0) & (original description: no original description)","protein_coding" "Kfl00197_0045","kfl00197_0045_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00204_0160","kfl00204_0160_v1.1","Klebsormidium nitens","(at1g50030 : 153.0) Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.; target of rapamycin (TOR); FUNCTIONS IN: protein binding, 1-phosphatidylinositol-3-kinase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding (InterPro:IPR009076), Armadillo-like helical (InterPro:IPR011989), Protein kinase-like domain (InterPro:IPR011009), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), Phosphatidylinositol 3/4-kinase, conserved site (InterPro:IPR018936), PIK-related kinase, FATC (InterPro:IPR003152); BEST Arabidopsis thaliana protein match is: Ataxia telangiectasia-mutated and RAD3-related (TAIR:AT5G40820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z987|atr_orysa : 118.0) Serine/threonine-protein kinase ATR (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 306.0) & (original description: no original description)","protein_coding" "Kfl00205_0140","kfl00205_0140_v1.1","Klebsormidium nitens","(at4g37470 : 209.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G03990.1); Has 8593 Blast hits to 8591 proteins in 1653 species: Archae - 86; Bacteria - 6869; Metazoa - 120; Fungi - 103; Plants - 302; Viruses - 19; Other Eukaryotes - 1094 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description)","protein_coding" "Kfl00209_0170","kfl00209_0170_v1.1","Klebsormidium nitens","(at1g55870 : 99.0) Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA.; ABA-HYPERSENSITIVE GERMINATION 2 (AHG2); FUNCTIONS IN: ribonuclease activity, nucleic acid binding; INVOLVED IN: response to abscisic acid stimulus, RNA modification, response to stress, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease CAF1 (InterPro:IPR006941), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G25430.1); Has 352 Blast hits to 351 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 63; Plants - 63; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)","protein_coding" "Kfl00211_0040","kfl00211_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00211_g6","kfl00211_g6_v1.1","Klebsormidium nitens","(at3g33530 : 95.5) Transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G26610.1). & (reliability: 191.0) & (original description: no original description)","protein_coding" "Kfl00221_0020","kfl00221_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00229_0050","kfl00229_0050_v1.1","Klebsormidium nitens","(at5g10470 : 403.0) Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA2. Demarcates the division site in plant cells.; kinesin like protein for actin based chloroplast movement 1 (KAC1); FUNCTIONS IN: microtubule binding, protein binding, microtubule motor activity; INVOLVED IN: preprophase band assembly, chloroplast avoidance movement, chloroplast accumulation movement, cytokinesis; LOCATED IN: cytosol, plasma membrane, membrane, cell plate, phragmoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin like protein for actin based chloroplast movement 2 (TAIR:AT5G65460.1); Has 13820 Blast hits to 12778 proteins in 615 species: Archae - 30; Bacteria - 578; Metazoa - 6060; Fungi - 1488; Plants - 1898; Viruses - 6; Other Eukaryotes - 3760 (source: NCBI BLink). & (o23826|k125_tobac : 174.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 806.0) & (original description: no original description)","protein_coding" "Kfl00229_0110","kfl00229_0110_v1.1","Klebsormidium nitens","(q43793|g6pdc_tobac : 609.0) Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD) - Nicotiana tabacum (Common tobacco) & (at5g35790 : 601.0) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.; glucose-6-phosphate dehydrogenase 1 (G6PD1); FUNCTIONS IN: glucose-6-phosphate dehydrogenase activity, protein binding; INVOLVED IN: pentose-phosphate shunt, oxidative branch, glucose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1202.0) & (original description: no original description)","protein_coding" "Kfl00230_0120","kfl00230_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00236_0100","kfl00236_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00238_0170","kfl00238_0170_v1.1","Klebsormidium nitens","(at1g02890 : 595.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), SMAD/FHA domain (InterPro:IPR008984); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G02480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q96372|cdc48_capan : 184.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 1190.0) & (original description: no original description)","protein_coding" "Kfl00243_0080","kfl00243_0080_v1.1","Klebsormidium nitens","(at5g60040 : 1445.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (p60288|rpoc1_phypa : 134.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Physcomitrella patens (Moss) & (reliability: 2890.0) & (original description: no original description)","protein_coding" "Kfl00244_0100","kfl00244_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00249_0120","kfl00249_0120_v1.1","Klebsormidium nitens","(at5g11040 : 605.0) TRS120; CONTAINS InterPro DOMAIN/s: Transport protein Trs120 (InterPro:IPR013935); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1210.0) & (original description: no original description)","protein_coding" "Kfl00258_0120","kfl00258_0120_v1.1","Klebsormidium nitens","(at4g39420 : 400.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 800.0) & (original description: no original description)","protein_coding" "Kfl00265_0120","kfl00265_0120_v1.1","Klebsormidium nitens","(at5g49030 : 1204.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (reliability: 2408.0) & (original description: no original description)","protein_coding" "Kfl00273_0160","kfl00273_0160_v1.1","Klebsormidium nitens","(at2g31170 : 581.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (reliability: 1162.0) & (original description: no original description)","protein_coding" "Kfl00274_0130","kfl00274_0130_v1.1","Klebsormidium nitens","(at2g30630 : 199.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cell killing; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, flower, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zeta toxin (InterPro:IPR010488); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) & (original description: no original description)","protein_coding" "Kfl00281_0020","kfl00281_0020_v1.1","Klebsormidium nitens","(at3g02460 : 136.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: plant adhesion molecule 1 (TAIR:AT5G15930.1); Has 4815 Blast hits to 4807 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 2496; Fungi - 964; Plants - 519; Viruses - 0; Other Eukaryotes - 836 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "Kfl00307_0050","kfl00307_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00313_0020","kfl00313_0020_v1.1","Klebsormidium nitens","(p46869|fla10_chlre : 190.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (at5g60930 : 177.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)","protein_coding" "Kfl00315_0080","kfl00315_0080_v1.1","Klebsormidium nitens","(at2g44710 : 182.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "Kfl00316_0150","kfl00316_0150_v1.1","Klebsormidium nitens","(at5g13010 : 1240.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2480.0) & (original description: no original description)","protein_coding" "Kfl00321_0070","kfl00321_0070_v1.1","Klebsormidium nitens","(at1g78920 : 1139.0) Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.; vacuolar H+-pyrophosphatase 2 (VP2); FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p21616|avp_phaau : 423.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 2278.0) & (original description: no original description)","protein_coding" "Kfl00329_0030","kfl00329_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00338_0040","kfl00338_0040_v1.1","Klebsormidium nitens","(at5g02310 : 216.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description)","protein_coding" "Kfl00338_0050","kfl00338_0050_v1.1","Klebsormidium nitens","(at5g02310 : 149.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "Kfl00343_0170","kfl00343_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00382_0030","kfl00382_0030_v1.1","Klebsormidium nitens","(at4g27640 : 938.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (reliability: 1876.0) & (original description: no original description)","protein_coding" "Kfl00387_0100","kfl00387_0100_v1.1","Klebsormidium nitens","(at2g22400 : 427.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1); Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298; Bacteria - 6215; Metazoa - 583; Fungi - 307; Plants - 251; Viruses - 0; Other Eukaryotes - 1322 (source: NCBI BLink). & (reliability: 854.0) & (original description: no original description)","protein_coding" "Kfl00390_0040","kfl00390_0040_v1.1","Klebsormidium nitens","(at4g29380 : 422.0) protein kinase family protein / WD-40 repeat family protein; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), WD40 repeat 2 (InterPro:IPR019782), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), HEAT, type 2 (InterPro:IPR021133), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G33770.1); Has 29441 Blast hits to 28057 proteins in 1177 species: Archae - 18; Bacteria - 2884; Metazoa - 11045; Fungi - 5111; Plants - 4360; Viruses - 46; Other Eukaryotes - 5977 (source: NCBI BLink). & (reliability: 844.0) & (original description: no original description)","protein_coding" "Kfl00429_0040","kfl00429_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00476_0060","kfl00476_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00483_0020","kfl00483_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00490_0080","kfl00490_0080_v1.1","Klebsormidium nitens","(at3g54460 : 639.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 1278.0) & (original description: no original description)","protein_coding" "Kfl00493_0030","kfl00493_0030_v1.1","Klebsormidium nitens","(at2g34660 : 286.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 103.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 572.0) & (original description: no original description)","protein_coding" "Kfl00497_0010","kfl00497_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00507_0060","kfl00507_0060_v1.1","Klebsormidium nitens","(at3g12300 : 296.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 592.0) & (original description: no original description)","protein_coding" "Kfl00509_0060","kfl00509_0060_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00535_0080","kfl00535_0080_v1.1","Klebsormidium nitens","(at5g06600 : 117.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)","protein_coding" "Kfl00565_0080","kfl00565_0080_v1.1","Klebsormidium nitens","(at5g49770 : 223.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 179.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 432.0) & (original description: no original description)","protein_coding" "Kfl00597_0010","kfl00597_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00607_0030","kfl00607_0030_v1.1","Klebsormidium nitens","(at3g05970 : 847.0) encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes; long-chain acyl-CoA synthetase 6 (LACS6); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: long-chain fatty acid metabolic process; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 7 (TAIR:AT5G27600.1); Has 54528 Blast hits to 52136 proteins in 3333 species: Archae - 925; Bacteria - 35165; Metazoa - 2570; Fungi - 2253; Plants - 2087; Viruses - 1; Other Eukaryotes - 11527 (source: NCBI BLink). & (p14912|4cl1_petcr : 135.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1694.0) & (original description: no original description)","protein_coding" "Kfl00651_0080","kfl00651_0080_v1.1","Klebsormidium nitens","(at3g14270 : 475.0) Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.; FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases (TAIR:AT4G33240.2); Has 8765 Blast hits to 8134 proteins in 458 species: Archae - 587; Bacteria - 13; Metazoa - 3836; Fungi - 1744; Plants - 978; Viruses - 3; Other Eukaryotes - 1604 (source: NCBI BLink). & (reliability: 950.0) & (original description: no original description)","protein_coding" "Kfl00671_0020","kfl00671_0020_v1.1","Klebsormidium nitens","(at2g25660 : 1067.0) embryo defective 2410 (emb2410); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF490 (InterPro:IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 2134.0) & (original description: no original description)","protein_coding" "Kfl00704_0030","kfl00704_0030_v1.1","Klebsormidium nitens","(at2g04270 : 213.0) Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.; RNAse E/G-like (RNEE/G); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Carbohydrate-binding-like fold (InterPro:IPR013784), Ribonuclease E/G (InterPro:IPR004659), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Immunoglobulin-like fold (InterPro:IPR013783), RNA-binding protein AU-1/Ribonuclease E/G (InterPro:IPR019307). & (reliability: 426.0) & (original description: no original description)","protein_coding" "Kfl00704_g4","kfl00704_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00737_0030","kfl00737_0030_v1.1","Klebsormidium nitens","(at1g68890 : 321.0) Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.; magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases; FUNCTIONS IN: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity, hydro-lyase activity, magnesium ion binding, thiamin pyrophosphate binding, catalytic activity; INVOLVED IN: phylloquinone biosynthetic process, photosystem I stabilization; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf whorl; CONTAINS InterPro DOMAIN/s: Menaquinone biosynthesis protein MenD (InterPro:IPR004433), Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Mandelate racemase/muconate lactonizing enzyme, C-terminal (InterPro:IPR013342), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea (InterPro:IPR010196), Mandelate racemase/muconate lactonizing enzyme, conserved site (InterPro:IPR018110); BEST Arabidopsis thaliana protein match is: isochorismate synthase 2 (TAIR:AT1G18870.2); Has 22452 Blast hits to 22188 proteins in 2448 species: Archae - 403; Bacteria - 16894; Metazoa - 237; Fungi - 200; Plants - 484; Viruses - 7; Other Eukaryotes - 4227 (source: NCBI BLink). & (q9zpc0|ics_catro : 253.0) Isochorismate synthase, chloroplast precursor (EC 5.4.4.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 642.0) & (original description: no original description)","protein_coding" "Kfl00741_0030","kfl00741_0030_v1.1","Klebsormidium nitens","(at5g05570 : 200.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: methyltransferase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: vesicle-mediated transport, methylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), WD40 repeat, subgroup (InterPro:IPR019781), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35560.2). & (reliability: 400.0) & (original description: no original description)","protein_coding" "Kfl00751_0010","kfl00751_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00758_0030","kfl00758_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00780_0030","kfl00780_0030_v1.1","Klebsormidium nitens","(at1g55860 : 726.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 1452.0) & (original description: no original description)","protein_coding" "Kfl00804_0030","kfl00804_0030_v1.1","Klebsormidium nitens","(at1g23230 : 641.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). & (reliability: 1282.0) & (original description: no original description)","protein_coding" "Kfl00991_0020","kfl00991_0020_v1.1","Klebsormidium nitens","(at3g13530 : 479.0) MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.; mitogen-activated protein kinase kinase kinase 7 (MAPKKK7); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: ovule developmental stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 6 (TAIR:AT3G07980.1); Has 137235 Blast hits to 134768 proteins in 5401 species: Archae - 190; Bacteria - 15422; Metazoa - 52001; Fungi - 13364; Plants - 33616; Viruses - 670; Other Eukaryotes - 21972 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 132.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 958.0) & (original description: no original description)","protein_coding" "Mp1g00210.1","No alias","Marchantia polymorpha","G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana (sp|q9flv4|y5248_arath : 249.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 105.4)","protein_coding" "Mp1g05510.1","No alias","Marchantia polymorpha","RNA helicase component SKI2 of SUPERKILLER (SKI) regulation complex","protein_coding" "Mp1g06420.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g11040.1","No alias","Marchantia polymorpha","SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana (sp|f4k493|clsy2_arath : 365.0)","protein_coding" "Mp1g11110.1","No alias","Marchantia polymorpha","component TAF2 of TFIId basal transcription regulation complex","protein_coding" "Mp1g11120.1","No alias","Marchantia polymorpha","component TAF2 of TFIId basal transcription regulation complex","protein_coding" "Mp1g19790.1","No alias","Marchantia polymorpha","component FtsH7|9 of FtsH plastidial protease complexes","protein_coding" "Mp1g24750.1","No alias","Marchantia polymorpha","monomeric E3 ubiquitin ligase (HECT)","protein_coding" "Mp2g00270.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g00380.1","No alias","Marchantia polymorpha","pheophorbide a oxygenase (PAO)","protein_coding" "Mp2g11230.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g12910.1","No alias","Marchantia polymorpha","component FBX of SCF E3 ubiquitin ligase complex","protein_coding" "Mp2g24120.1","No alias","Marchantia polymorpha","Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica (sp|q0djs1|tor_orysj : 150.0)","protein_coding" "Mp2g24900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g17350.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding" "Mp4g14050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g06650.1","No alias","Marchantia polymorpha","component Pex1 of Pex1-Pex6 subcomplex","protein_coding" "Mp6g14650.1","No alias","Marchantia polymorpha","protein kinase (PIKK). phosphatidylinositol kinase component TOR of TORC complex","protein_coding" "Mp7g04160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g08540.1","No alias","Marchantia polymorpha","Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 103.0)","protein_coding" "Mp7g09450.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana (sp|q0wnn7|pp176_arath : 320.0)","protein_coding" "Mp8g00190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g08460.1","No alias","Marchantia polymorpha","CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana (sp|q84wq5|cbsx5_arath : 136.0)","protein_coding" "Mp8g12510.1","No alias","Marchantia polymorpha","C2H2 zinc finger transcription factor","protein_coding" "Pp1s121_85V6","No alias","Physcomitrella patens","F7F1.3; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s122_142V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s124_23V6","No alias","Physcomitrella patens","bhlh transcription factor","protein_coding" "Pp1s126_60V6","No alias","Physcomitrella patens","F22I13.1; protein kinase family protein [Arabidopsis thaliana]","protein_coding" "Pp1s12_414V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s132_58V6","No alias","Physcomitrella patens","protein kinase (ame2 afc1)","protein_coding" "Pp1s136_142V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s154_81V6","No alias","Physcomitrella patens","lipase precursor","protein_coding" "Pp1s16_333V6","No alias","Physcomitrella patens","protein kinase","protein_coding" "Pp1s174_93V6","No alias","Physcomitrella patens","set domain protein","protein_coding" "Pp1s181_107V6","No alias","Physcomitrella patens","amino acid selective channel protein","protein_coding" "Pp1s226_43V6","No alias","Physcomitrella patens","triacylglycerol lipase","protein_coding" "Pp1s230_66V6","No alias","Physcomitrella patens","F17I23.270; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s233_16V6","No alias","Physcomitrella patens","pft1 (phytochrome and flowering time 1) transcription coactivator","protein_coding" "Pp1s235_117V6","No alias","Physcomitrella patens","F18A8.10; leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana]","protein_coding" "Pp1s24_249V6","No alias","Physcomitrella patens","at1g19710","protein_coding" "Pp1s24_7V6","No alias","Physcomitrella patens","isochorismate synthase","protein_coding" "Pp1s25_346V6","No alias","Physcomitrella patens","Probable potassium transporter 2 (OsHAK2) [no tax name]","protein_coding" "Pp1s264_33V6","No alias","Physcomitrella patens","K18C1.7; cyclin family [Arabidopsis thaliana]","protein_coding" "Pp1s273_51V6","No alias","Physcomitrella patens","mikc* mads-box transcription factor","protein_coding" "Pp1s330_35V6","No alias","Physcomitrella patens","tkl family protein kinase","protein_coding" "Pp1s33_245V6","No alias","Physcomitrella patens","sulfonate biosynthesis","protein_coding" "Pp1s33_7V6","No alias","Physcomitrella patens","sigma 54 modulation protein ribosomal protein s30ea","protein_coding" "Pp1s351_40V6","No alias","Physcomitrella patens","ha-tagged protein kinase domain ofmitogen-activated protein kinase kinase kinase","protein_coding" "Pp1s353_7V6","No alias","Physcomitrella patens","abc transporter family protein","protein_coding" "Pp1s35_131V6","No alias","Physcomitrella patens","chaperone protein","protein_coding" "Pp1s381_35V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s387_57V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s39_105V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s3_519V6","No alias","Physcomitrella patens","F6E21.1; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s401_28V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s403_21V6","No alias","Physcomitrella patens","MCA23.20; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s42_193V6","No alias","Physcomitrella patens","phosphoribosyl pyrophosphate synthetase","protein_coding" "Pp1s47_44V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding" "Pp1s62_62V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s6_10V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding" "Pp1s77_252V6","No alias","Physcomitrella patens","anthranilate synthase component","protein_coding" "Pp1s78_226V6","No alias","Physcomitrella patens","dna-dependent protein kinase catalytic subunit","protein_coding" "Pp1s84_276V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding" "Pp1s91_100V6","No alias","Physcomitrella patens","iq motif containing with aaa domain","protein_coding" "Pp1s93_123V6","No alias","Physcomitrella patens","chromodomain-helicase-dna-binding protein","protein_coding" "Pp1s99_12V6","No alias","Physcomitrella patens","cell division control protein 15","protein_coding"