"sequence_id","alias","species","description","type"
"100270","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"104800","No alias","Selaginella moellendorffii ","FMN-linked oxidoreductases superfamily protein","protein_coding"
"107884","No alias","Selaginella moellendorffii ","NAD(H) kinase 3","protein_coding"
"122255","No alias","Selaginella moellendorffii ","Histidyl-tRNA synthetase 1","protein_coding"
"132900","No alias","Selaginella moellendorffii ","putrescine-binding periplasmic protein-related","protein_coding"
"141141","No alias","Selaginella moellendorffii ","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"146341","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"149203","No alias","Selaginella moellendorffii ","AMP-dependent synthetase and ligase family protein","protein_coding"
"165253","No alias","Selaginella moellendorffii ","Proteasome component (PCI) domain protein","protein_coding"
"172681","No alias","Selaginella moellendorffii ","glutamate tRNA synthetase","protein_coding"
"233322","No alias","Selaginella moellendorffii ","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"31594","No alias","Selaginella moellendorffii ","Seven transmembrane MLO family protein","protein_coding"
"33344","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF616)","protein_coding"
"411166","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412471","No alias","Selaginella moellendorffii ","Transducin family protein / WD-40 repeat family protein","protein_coding"
"437796","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"439159","No alias","Selaginella moellendorffii ","Zincin-like metalloproteases family protein","protein_coding"
"52099","No alias","Selaginella moellendorffii ","cleavage and polyadenylation specificity factor 73 kDa subunit-II","protein_coding"
"61333","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"82855","No alias","Selaginella moellendorffii ","electron transport SCO1/SenC family protein","protein_coding"
"85440","No alias","Selaginella moellendorffii ","HSP20-like chaperones superfamily protein","protein_coding"
"A4A49_04264","No alias","Nicotiana attenuata","bifunctional 3-dehydroquinate dehydrataseshikimate dehydrogenase, chloroplastic","protein_coding"
"A4A49_18212","No alias","Nicotiana attenuata","bifunctional 3-dehydroquinate dehydrataseshikimate dehydrogenase, chloroplastic","protein_coding"
"A4A49_22445","No alias","Nicotiana attenuata","bifunctional 3-dehydroquinate dehydrataseshikimate dehydrogenase, chloroplastic","protein_coding"
"A4A49_27961","No alias","Nicotiana attenuata","bifunctional 3-dehydroquinate dehydrataseshikimate dehydrogenase, chloroplastic","protein_coding"
"AC196710.3_FG013","No alias","Zea mays","Function unknown","protein_coding"
"AC197013.3_FG008","No alias","Zea mays","Function unknown","protein_coding"
"AC200745.4_FG007","No alias","Zea mays","AAA-ATPase 1","protein_coding"
"At1g06130","No alias","Arabidopsis thaliana","GLX2-4 [Source:UniProtKB/TrEMBL;Acc:A0A178WGQ2]","protein_coding"
"At1g09340","No alias","Arabidopsis thaliana","chloroplast RNA binding [Source:TAIR;Acc:AT1G09340]","protein_coding"
"At1g22610","No alias","Arabidopsis thaliana","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]","protein_coding"
"At1g61170","No alias","Arabidopsis thaliana","At1g61170 [Source:UniProtKB/TrEMBL;Acc:O22729]","protein_coding"
"At1g62750","No alias","Arabidopsis thaliana","Elongation factor G, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI75]","protein_coding"
"At1g63750","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9CAE0]","protein_coding"
"At1g68010","No alias","Arabidopsis thaliana","hydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]","protein_coding"
"At1g74530","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q0WPJ3]","protein_coding"
"At2g01140","No alias","Arabidopsis thaliana","Fructose-bisphosphate aldolase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU52]","protein_coding"
"At2g17260","No alias","Arabidopsis thaliana","glutamate receptor 2 [Source:TAIR;Acc:AT2G17260]","protein_coding"
"At2g26080","No alias","Arabidopsis thaliana","Glycine dehydrogenase (decarboxylating) 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80988]","protein_coding"
"At2g34660","No alias","Arabidopsis thaliana","ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]","protein_coding"
"At2g34710","No alias","Arabidopsis thaliana","Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]","protein_coding"
"At2g47160","No alias","Arabidopsis thaliana","HCO3-transporter family [Source:UniProtKB/TrEMBL;Acc:A8MS82]","protein_coding"
"At3g06350","No alias","Arabidopsis thaliana","Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQT8]","protein_coding"
"At3g11630","No alias","Arabidopsis thaliana","2-Cys peroxiredoxin BAS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96291]","protein_coding"
"At3g16830","No alias","Arabidopsis thaliana","Topless-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ0]","protein_coding"
"At3g19450","No alias","Arabidopsis thaliana","Cinnamyl alcohol dehydrogenase 4 [Source:UniProtKB/Swiss-Prot;Acc:P48523]","protein_coding"
"At3g19480","No alias","Arabidopsis thaliana","D-3-phosphoglycerate dehydrogenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LT69]","protein_coding"
"At3g22810","No alias","Arabidopsis thaliana","Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]","protein_coding"
"At3g48420","No alias","Arabidopsis thaliana","CBBY-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94K71]","protein_coding"
"At3g55710","No alias","Arabidopsis thaliana","UDP-glycosyltransferase 76F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M051]","protein_coding"
"At3g55800","No alias","Arabidopsis thaliana","Sedoheptulose-1,7-bisphosphatase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46283]","protein_coding"
"At4g05090","No alias","Arabidopsis thaliana","3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]","protein_coding"
"At4g21990","No alias","Arabidopsis thaliana","5'-adenylylsulfate reductase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P92980]","protein_coding"
"At4g30790","No alias","Arabidopsis thaliana","Autophagy-related protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUG7]","protein_coding"
"At4g31390","No alias","Arabidopsis thaliana","AtACDO1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5V0]","protein_coding"
"At4g32710","No alias","Arabidopsis thaliana","PERK14 [Source:UniProtKB/TrEMBL;Acc:A0A178V367]","protein_coding"
"At4g33950","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]","protein_coding"
"At4g38970","No alias","Arabidopsis thaliana","Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178UW98]","protein_coding"
"At5g04140","No alias","Arabidopsis thaliana","glutamate synthase 1 [Source:TAIR;Acc:AT5G04140]","protein_coding"
"At5g09660","No alias","Arabidopsis thaliana","Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B3H560]","protein_coding"
"At5g17890","No alias","Arabidopsis thaliana","Protein DA1-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKN7]","protein_coding"
"At5g22510","No alias","Arabidopsis thaliana","Alkaline/neutral invertase E, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FK88]","protein_coding"
"At5g43130","No alias","Arabidopsis thaliana","Transcription initiation factor TFIID subunit 4b [Source:UniProtKB/Swiss-Prot;Acc:F4K4L7]","protein_coding"
"At5g44800","No alias","Arabidopsis thaliana","PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]","protein_coding"
"At5g46800","No alias","Arabidopsis thaliana","Mitochondrial carnitine/acylcarnitine carrier-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XM7]","protein_coding"
"At5g47820","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-4A [Source:UniProtKB/Swiss-Prot;Acc:Q8GS71]","protein_coding"
"At5g56860","No alias","Arabidopsis thaliana","GATA transcription factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ36]","protein_coding"
"At5g61410","No alias","Arabidopsis thaliana","RPE [Source:UniProtKB/TrEMBL;Acc:A0A178UPG9]","protein_coding"
"At5g63940","No alias","Arabidopsis thaliana","At5g63940 [Source:UniProtKB/TrEMBL;Acc:Q9LVN9]","protein_coding"
"At5g65010","No alias","Arabidopsis thaliana","asparagine synthetase 2 [Source:TAIR;Acc:AT5G65010]","protein_coding"
"At5g66730","No alias","Arabidopsis thaliana","IDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UMT2]","protein_coding"
"Bradi1g03800","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi1g09680","No alias","Brachypodium distachyon","endoplasmic reticulum oxidoreductins 1","protein_coding"
"Bradi1g15440","No alias","Brachypodium distachyon","dicer-like 2","protein_coding"
"Bradi1g16210","No alias","Brachypodium distachyon","SPFH/Band 7/PHB domain-containing membrane-associated protein family","protein_coding"
"Bradi1g16480","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g18800","No alias","Brachypodium distachyon","Glycosyl transferase family 4 protein","protein_coding"
"Bradi1g23000","No alias","Brachypodium distachyon","interferon-related developmental regulator family protein / IFRD protein family","protein_coding"
"Bradi1g26440","No alias","Brachypodium distachyon","Helicase protein with RING/U-box domain","protein_coding"
"Bradi1g28010","No alias","Brachypodium distachyon","Mannose-P-dolichol utilization defect 1 protein","protein_coding"
"Bradi1g28310","No alias","Brachypodium distachyon","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding"
"Bradi1g28627","No alias","Brachypodium distachyon","glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein","protein_coding"
"Bradi1g28770","No alias","Brachypodium distachyon","ATP synthase D chain, mitochondrial","protein_coding"
"Bradi1g29427","No alias","Brachypodium distachyon","Disease resistance protein (CC-NBS-LRR class) family","protein_coding"
"Bradi1g35742","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi1g36860","No alias","Brachypodium distachyon","SOUL heme-binding family protein","protein_coding"
"Bradi1g37582","No alias","Brachypodium distachyon","ATPase, V1 complex, subunit B protein","protein_coding"
"Bradi1g38700","No alias","Brachypodium distachyon","PHD finger protein-related","protein_coding"
"Bradi1g41740","No alias","Brachypodium distachyon","Tyrosine transaminase family protein","protein_coding"
"Bradi1g42660","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g44460","No alias","Brachypodium distachyon","Phosphofructokinase family protein","protein_coding"
"Bradi1g45150","No alias","Brachypodium distachyon","galactosyltransferase1","protein_coding"
"Bradi1g45370","No alias","Brachypodium distachyon","glutaredoxin-related","protein_coding"
"Bradi1g49230","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g50810","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g54050","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi1g55030","No alias","Brachypodium distachyon","FAD-linked oxidases family protein","protein_coding"
"Bradi1g61720","No alias","Brachypodium distachyon","DHHC-type zinc finger family protein","protein_coding"
"Bradi1g63020","No alias","Brachypodium distachyon","FUMARASE 2","protein_coding"
"Bradi1g63800","No alias","Brachypodium distachyon","translocase of the outer mitochondrial membrane 40","protein_coding"
"Bradi1g66440","No alias","Brachypodium distachyon","UDP-XYL synthase 6","protein_coding"
"Bradi1g67790","No alias","Brachypodium distachyon","chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative","protein_coding"
"Bradi1g70180","No alias","Brachypodium distachyon","Insulinase (Peptidase family M16) protein","protein_coding"
"Bradi1g70460","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi1g72120","No alias","Brachypodium distachyon","Modifier of rudimentary (Mod(r)) protein","protein_coding"
"Bradi1g77850","No alias","Brachypodium distachyon","DHFS-FPGS homolog B","protein_coding"
"Bradi2g01511","No alias","Brachypodium distachyon","alanine-tRNA ligases;nucleic acid binding;ligases, forming aminoacyl-tRNA and related compounds;nucleotide binding;ATP binding","protein_coding"
"Bradi2g03920","No alias","Brachypodium distachyon","receptor like protein 23","protein_coding"
"Bradi2g04610","No alias","Brachypodium distachyon","FAD/NAD(P)-binding oxidoreductase","protein_coding"
"Bradi2g06200","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi2g06650","No alias","Brachypodium distachyon","CTC-interacting domain 9","protein_coding"
"Bradi2g07890","No alias","Brachypodium distachyon","elongation defective 1 protein / ELD1 protein","protein_coding"
"Bradi2g08010","No alias","Brachypodium distachyon","Synaptobrevin family protein","protein_coding"
"Bradi2g10270","No alias","Brachypodium distachyon","E1 C-terminal related 1","protein_coding"
"Bradi2g10816","No alias","Brachypodium distachyon","Leucine-rich repeat (LRR) family protein","protein_coding"
"Bradi2g13170","No alias","Brachypodium distachyon","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Bradi2g17974","No alias","Brachypodium distachyon","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Bradi2g18550","No alias","Brachypodium distachyon","aldehyde dehydrogenase 12A1","protein_coding"
"Bradi2g19400","No alias","Brachypodium distachyon","hexokinase 1","protein_coding"
"Bradi2g19510","No alias","Brachypodium distachyon","staurosporin and temperature sensitive 3-like A","protein_coding"
"Bradi2g19572","No alias","Brachypodium distachyon","AAA-type ATPase family protein","protein_coding"
"Bradi2g21760","No alias","Brachypodium distachyon","Endoplasmic reticulum vesicle transporter protein","protein_coding"
"Bradi2g21860","No alias","Brachypodium distachyon","NADH:cytochrome B5 reductase 1","protein_coding"
"Bradi2g23500","No alias","Brachypodium distachyon","Cysteine/Histidine-rich C1 domain family protein","protein_coding"
"Bradi2g23690","No alias","Brachypodium distachyon","phosphate transporter 4;2","protein_coding"
"Bradi2g24790","No alias","Brachypodium distachyon","NAC domain containing protein 103","protein_coding"
"Bradi2g25580","No alias","Brachypodium distachyon","squamosa promoter binding protein-like 7","protein_coding"
"Bradi2g25920","No alias","Brachypodium distachyon","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Bradi2g34950","No alias","Brachypodium distachyon","DNAJ heat shock family protein","protein_coding"
"Bradi2g35187","No alias","Brachypodium distachyon","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding"
"Bradi2g40550","No alias","Brachypodium distachyon","protein kinase family protein / protein phosphatase 2C ( PP2C) family protein","protein_coding"
"Bradi2g43910","No alias","Brachypodium distachyon","calcium-dependent protein kinase 6","protein_coding"
"Bradi2g44140","No alias","Brachypodium distachyon","cytochrome P450, family 72, subfamily A, polypeptide 15","protein_coding"
"Bradi2g44180","No alias","Brachypodium distachyon","cytochrome P450, family 72, subfamily A, polypeptide 14","protein_coding"
"Bradi2g44450","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding"
"Bradi2g44460","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding"
"Bradi2g45140","No alias","Brachypodium distachyon","nucleotide transporter 1","protein_coding"
"Bradi2g45220","No alias","Brachypodium distachyon","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Bradi2g46970","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g47410","No alias","Brachypodium distachyon","ATP binding cassette subfamily B4","protein_coding"
"Bradi2g50500","No alias","Brachypodium distachyon","aspartate aminotransferase 3","protein_coding"
"Bradi2g56880","No alias","Brachypodium distachyon","plastid transcriptionally active 4","protein_coding"
"Bradi2g59037","No alias","Brachypodium distachyon","glucosidase 1","protein_coding"
"Bradi2g62730","No alias","Brachypodium distachyon","homolog of mamallian P58IPK","protein_coding"
"Bradi3g00857","No alias","Brachypodium distachyon","Dihydrolipoamide acetyltransferase, long form protein","protein_coding"
"Bradi3g01527","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi3g03290","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g05490","No alias","Brachypodium distachyon","aldehyde dehydrogenase 5F1","protein_coding"
"Bradi3g06930","No alias","Brachypodium distachyon","Citrate synthase family protein","protein_coding"
"Bradi3g07286","No alias","Brachypodium distachyon","ubiquitin family protein","protein_coding"
"Bradi3g08190","No alias","Brachypodium distachyon","Peptidase C13 family","protein_coding"
"Bradi3g09050","No alias","Brachypodium distachyon","aspartate aminotransferase 1","protein_coding"
"Bradi3g10000","No alias","Brachypodium distachyon","Protein of unknown function (DUF502)","protein_coding"
"Bradi3g11530","No alias","Brachypodium distachyon","translocation protein-related","protein_coding"
"Bradi3g12250","No alias","Brachypodium distachyon","Calcium-dependent lipid-binding (CaLB domain) family protein","protein_coding"
"Bradi3g17280","No alias","Brachypodium distachyon","Dihydrolipoamide acetyltransferase, long form protein","protein_coding"
"Bradi3g17680","No alias","Brachypodium distachyon","GTP binding","protein_coding"
"Bradi3g19490","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi3g21710","No alias","Brachypodium distachyon","golgi nucleotide sugar transporter 4","protein_coding"
"Bradi3g22030","No alias","Brachypodium distachyon","acclimation of photosynthesis to  environment","protein_coding"
"Bradi3g22420","No alias","Brachypodium distachyon","Enhancer of polycomb-like transcription factor protein","protein_coding"
"Bradi3g22430","No alias","Brachypodium distachyon","Co-chaperone GrpE family protein","protein_coding"
"Bradi3g24730","No alias","Brachypodium distachyon","gamma subunit of Mt ATP synthase","protein_coding"
"Bradi3g30790","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi3g35350","No alias","Brachypodium distachyon","aminopeptidase M1","protein_coding"
"Bradi3g40560","No alias","Brachypodium distachyon","DNA repair ATPase-related","protein_coding"
"Bradi3g41393","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi3g43090","No alias","Brachypodium distachyon","PREFOLDIN 1","protein_coding"
"Bradi3g43130","No alias","Brachypodium distachyon","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Bradi3g43900","No alias","Brachypodium distachyon","ubiquitin-associated (UBA)/TS-N domain-containing protein","protein_coding"
"Bradi3g44620","No alias","Brachypodium distachyon","acetyl-CoA synthetase","protein_coding"
"Bradi3g45870","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g48350","No alias","Brachypodium distachyon","LETM1-like protein","protein_coding"
"Bradi3g48760","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi3g49070","No alias","Brachypodium distachyon","ATP citrate lyase (ACL) family protein","protein_coding"
"Bradi3g49120","No alias","Brachypodium distachyon","glycolipid transfer protein 1","protein_coding"
"Bradi3g52980","No alias","Brachypodium distachyon","histidinol phosphate aminotransferase 1","protein_coding"
"Bradi3g53100","No alias","Brachypodium distachyon","heat shock protein 70 (Hsp 70) family protein","protein_coding"
"Bradi3g55340","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi3g56497","No alias","Brachypodium distachyon","RNA polymerase II, Rpb4, core protein","protein_coding"
"Bradi3g58740","No alias","Brachypodium distachyon","APR-like 4","protein_coding"
"Bradi4g05897","No alias","Brachypodium distachyon","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Bradi4g06950","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g07810","No alias","Brachypodium distachyon","thymidylate synthase 1","protein_coding"
"Bradi4g15047","No alias","Brachypodium distachyon","cysteine-rich RLK (RECEPTOR-like protein kinase) 8","protein_coding"
"Bradi4g20557","No alias","Brachypodium distachyon","diphthamide synthesis DPH2 family protein","protein_coding"
"Bradi4g22230","No alias","Brachypodium distachyon","Pyruvate kinase family protein","protein_coding"
"Bradi4g27550","No alias","Brachypodium distachyon","Glucose-6-phosphate/phosphate translocator-related","protein_coding"
"Bradi4g32280","No alias","Brachypodium distachyon","Sec23/Sec24 protein transport family protein","protein_coding"
"Bradi4g35440","No alias","Brachypodium distachyon","inositol 1,3,4-trisphosphate 5/6-kinase 4","protein_coding"
"Bradi4g42842","No alias","Brachypodium distachyon","FKBP-type peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Bradi4g43990","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g01574","No alias","Brachypodium distachyon","protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding","protein_coding"
"Bradi5g13800","No alias","Brachypodium distachyon","26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain","protein_coding"
"Bradi5g14180","No alias","Brachypodium distachyon","UDP-galactose transporter 6","protein_coding"
"Bradi5g14630","No alias","Brachypodium distachyon","cytochrome C oxidase 6B","protein_coding"
"Bradi5g16360","No alias","Brachypodium distachyon","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Bradi5g17370","No alias","Brachypodium distachyon","GATA transcription factor 26","protein_coding"
"Bradi5g19030","No alias","Brachypodium distachyon","ubiquitin fusion degradation 1","protein_coding"
"Bradi5g23320","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Brara.A00524.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00530.1","No alias","Brassica rapa","component *(Sec24) of Sec23/24 cargo adaptor subcomplex","protein_coding"
"Brara.A00675.1","No alias","Brassica rapa","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.A00771.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00873.1","No alias","Brassica rapa","regulatory component *(RPN1) of 26S proteasome","protein_coding"
"Brara.A00969.1","No alias","Brassica rapa","regulatory protein *(IPGA) of cortical microtubule organisation","protein_coding"
"Brara.A00978.1","No alias","Brassica rapa","LRR-VI-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A01263.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01388.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.A01690.1","No alias","Brassica rapa","Kinesin-14-type motor protein & microtubule-based motor protein *(Kinesin-14)","protein_coding"
"Brara.A01704.1","No alias","Brassica rapa","tRNA guanine-methyltransferase *(TRM5)","protein_coding"
"Brara.A02330.1","No alias","Brassica rapa","regulatory component B2 of PP2A phosphatase complexes","protein_coding"
"Brara.A02375.1","No alias","Brassica rapa","catalytic component of acetolactate synthase complex & catalytic component of acetolactate synthase complex & EC_2.2 transferase transferring aldehyde or ketonic group","protein_coding"
"Brara.A02586.1","No alias","Brassica rapa","component *(uL2m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.A02618.1","No alias","Brassica rapa","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Brara.A02620.1","No alias","Brassica rapa","regulatory protein (CIB) of blue light perception & bHLH-type transcription factor","protein_coding"
"Brara.A03387.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03406.1","No alias","Brassica rapa","ROP-activating protein *(RopGAP)","protein_coding"
"Brara.A03422.1","No alias","Brassica rapa","heavy chain of clathrin triskelion","protein_coding"
"Brara.A03534.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03658.1","No alias","Brassica rapa","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Brara.A03874.1","No alias","Brassica rapa","organellar tyrosine-tRNA ligase","protein_coding"
"Brara.B00070.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding"
"Brara.B00355.1","No alias","Brassica rapa","metabolite transporter *(DTX)","protein_coding"
"Brara.B00420.1","No alias","Brassica rapa","cytosolic NADP-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.B01381.1","No alias","Brassica rapa","component *(TRS130/CLUB) of TRAPP-II complex-specific components","protein_coding"
"Brara.B01540.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01606.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01655.1","No alias","Brassica rapa","gibberellin signal transducer *(DELLA) & transcription factor *(DELLA) & GRAS-type transcription factor","protein_coding"
"Brara.B02044.1","No alias","Brassica rapa","threonine synthase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.B02359.1","No alias","Brassica rapa","alpha-type-2 component *(PAB) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.B02381.1","No alias","Brassica rapa","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & hydrogen peroxide receptor kinase *(HPCA)","protein_coding"
"Brara.B02655.1","No alias","Brassica rapa","subunit gamma of peripheral CF1 subcomplex of ATP synthase complex","protein_coding"
"Brara.B02743.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03461.1","No alias","Brassica rapa","3-ketoacyl-CoA thiolase *(KAT1/2/5) & 3-ketoacyl-CoA thiolase *(KAT1/2/5) & EC_2.3 acyltransferase","protein_coding"
"Brara.B03593.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03890.1","No alias","Brassica rapa","dicarboxylate","protein_coding"
"Brara.C00071.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00098.1","No alias","Brassica rapa","Fasciclin-type arabinogalactan protein","protein_coding"
"Brara.C00129.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.C00131.1","No alias","Brassica rapa","xylogalacturonan xylosyltransferase","protein_coding"
"Brara.C00260.1","No alias","Brassica rapa","polysaccharide O-acetyltransferase *(TBR)","protein_coding"
"Brara.C00481.1","No alias","Brassica rapa","component *(NQO6/PSST) of NADH dehydrogenase electron output (module Q)","protein_coding"
"Brara.C00564.1","No alias","Brassica rapa","Rieske iron-sulphur component of cytochrome c reductase complex & EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"Brara.C00621.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00673.1","No alias","Brassica rapa","UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.C01368.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.C01501.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01848.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02510.1","No alias","Brassica rapa","LRR-VIII-1 protein kinase","protein_coding"
"Brara.C02542.1","No alias","Brassica rapa","adenylate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C02667.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02756.1","No alias","Brassica rapa","thioredoxin *(TRX-M)","protein_coding"
"Brara.C02952.1","No alias","Brassica rapa","voltage-gated anion channel *(VDAC)","protein_coding"
"Brara.C03106.1","No alias","Brassica rapa","component alpha of actin capping protein heterodimer","protein_coding"
"Brara.C03151.1","No alias","Brassica rapa","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Brara.C03433.1","No alias","Brassica rapa","phosphoglycerate kinase & phosphoglycerate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C03602.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03687.1","No alias","Brassica rapa","A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.C03792.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03951.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.C04232.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04253.1","No alias","Brassica rapa","phosphopentose epimerase & EC_5.1 racemase or epimerase","protein_coding"
"Brara.C04315.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding"
"Brara.D00026.1","No alias","Brassica rapa","endoribonuclease *(CSP41)","protein_coding"
"Brara.D00201.1","No alias","Brassica rapa","O-acetylserine sulfydrylase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.D00343.1","No alias","Brassica rapa","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.D00837.1","No alias","Brassica rapa","component *(NQO3/75kDa) of NADH dehydrogenase electron input (module N) & EC_1.6 oxidoreductase acting on NADH or NADPH","protein_coding"
"Brara.D00927.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01146.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01239.1","No alias","Brassica rapa","receptor component *(Tom20) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Brara.D01249.1","No alias","Brassica rapa","regulatory protein *(XCT) of light-dependent circadian clock","protein_coding"
"Brara.D01290.1","No alias","Brassica rapa","component *(24kDa/FAd) of ATP synthase membrane MF0 subcomplex","protein_coding"
"Brara.D01334.1","No alias","Brassica rapa","classical arabinogalactan protein","protein_coding"
"Brara.D01342.1","No alias","Brassica rapa","actin-binding protein *(NET2)","protein_coding"
"Brara.D01606.1","No alias","Brassica rapa","calcium sensor *(CML) & calcium sensor *(CaM)","protein_coding"
"Brara.D01889.1","No alias","Brassica rapa","component *(LHW) of TMO5-LHW cytokinin control complex & LHW/LHL-type transcription factor","protein_coding"
"Brara.D01896.1","No alias","Brassica rapa","class-III histone methyltransferase *(Trx)","protein_coding"
"Brara.D01986.1","No alias","Brassica rapa","cytochrome electron shuttle hemoprotein *(Cyt-b5) & electron shuttle component *(Cyt-b5) of CER1-CER3 alkane-forming complex","protein_coding"
"Brara.D02105.1","No alias","Brassica rapa","HD-ZIP III-type transcription factor","protein_coding"
"Brara.D02447.1","No alias","Brassica rapa","xylan O-acetyltransferase *(XOAT)","protein_coding"
"Brara.D02698.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D02827.1","No alias","Brassica rapa","subfamily ABCB transporter","protein_coding"
"Brara.E00669.1","No alias","Brassica rapa","CTP","protein_coding"
"Brara.E00899.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01000.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01557.1","No alias","Brassica rapa","CMP-keto-3-deoxymanno-octulosonic acid synthetase","protein_coding"
"Brara.E01818.1","No alias","Brassica rapa","protein disulfide isomerase *(PDI-B)","protein_coding"
"Brara.E01987.1","No alias","Brassica rapa","arabinogalactan protein *(Xylogen)","protein_coding"
"Brara.E02008.1","No alias","Brassica rapa","EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)","protein_coding"
"Brara.E02127.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02255.1","No alias","Brassica rapa","proton","protein_coding"
"Brara.E02460.1","No alias","Brassica rapa","dihydrolipoamide dehydrogenase component of 2-oxoglutarate dehydrogenase complex & dihydrolipoamide dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex & dihydrolipoyl dehydrogenase component *(L-protein) of glycine cleavage system & dihydrolipoamide dehydrogenase component of mitochondrial pyruvate dehydrogenase complex & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Brara.E02980.1","No alias","Brassica rapa","indole-3-acetic acid carboxyl methyltransferase *(MES17)","protein_coding"
"Brara.E03158.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03160.1","No alias","Brassica rapa","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.E03208.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03289.1","No alias","Brassica rapa","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Brara.E03313.1","No alias","Brassica rapa","type-2 peroxiredoxin *(PrxII)","protein_coding"
"Brara.F00031.1","No alias","Brassica rapa","Kinesin-14-type motor protein","protein_coding"
"Brara.F00234.1","No alias","Brassica rapa","SD-2 protein kinase & Thaumatin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F00380.1","No alias","Brassica rapa","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"Brara.F00425.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00457.1","No alias","Brassica rapa","dihydrolipoamide dehydrogenase component of 2-oxoglutarate dehydrogenase complex & dihydrolipoamide dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex & dihydrolipoyl dehydrogenase component *(L-protein) of glycine cleavage system & dihydrolipoamide dehydrogenase component of mitochondrial pyruvate dehydrogenase complex & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Brara.F00481.1","No alias","Brassica rapa","EC_1.11 oxidoreductase acting on peroxide as acceptor & cytosolic ascorbate peroxidase *(APX)","protein_coding"
"Brara.F00581.1","No alias","Brassica rapa","small GTPase *(Sar1)","protein_coding"
"Brara.F00655.1","No alias","Brassica rapa","sugar transporter *(SUT/SUC)","protein_coding"
"Brara.F00657.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00766.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F01107.1","No alias","Brassica rapa","cohesin cofactor *(PDS5)","protein_coding"
"Brara.F01138.1","No alias","Brassica rapa","component *(MED22) of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Brara.F01467.1","No alias","Brassica rapa","regulatory protein *(CYCB) of cell cycle","protein_coding"
"Brara.F01675.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02290.1","No alias","Brassica rapa","arabinogalactan protein *(Xylogen)","protein_coding"
"Brara.F02752.1","No alias","Brassica rapa","component *(DDR) of ISWI chromatin remodeling complex","protein_coding"
"Brara.F02952.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03020.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & small subunit *(APS) of ADP-glucose pyrophosphorylase","protein_coding"
"Brara.F03051.1","No alias","Brassica rapa","Kinesin-4-type motor protein & matrix polysaccharide-trafficking kinesin *(FRA)","protein_coding"
"Brara.F03112.1","No alias","Brassica rapa","zf-HD-type transcription factor","protein_coding"
"Brara.F03256.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.F03603.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03661.1","No alias","Brassica rapa","LRR-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F03711.1","No alias","Brassica rapa","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Brara.F03778.1","No alias","Brassica rapa","S-nitrosoglutathione reductase *(GSNOR) & glutathione-dependent formaldehyde dehydrogenase *(FALDH)","protein_coding"
"Brara.F03809.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00548.1","No alias","Brassica rapa","AS2/LOB-type transcription factor","protein_coding"
"Brara.G00774.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01400.1","No alias","Brassica rapa","UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.G01411.1","No alias","Brassica rapa","alpha-class expansin","protein_coding"
"Brara.G01434.1","No alias","Brassica rapa","ubiquitin-proteasome shuttle factor *(RAD23)","protein_coding"
"Brara.G01567.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G01677.1","No alias","Brassica rapa","xylan O-acetyltransferase *(XOAT)","protein_coding"
"Brara.G02065.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02336.1","No alias","Brassica rapa","beta-galactosidase *(BGAL17) & EC_3.2 glycosylase","protein_coding"
"Brara.G02538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02702.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02732.1","No alias","Brassica rapa","3-ketoacyl-CoA reductase *(KCR) & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G03024.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03521.1","No alias","Brassica rapa","protein disulfide isomerase *(PDI-L) & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.G03649.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding"
"Brara.G03672.1","No alias","Brassica rapa","phosphoglycerate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H00666.1","No alias","Brassica rapa","peptidyl-prolyl cis-trans isomerase *(CYP28) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.H00786.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01049.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.H01116.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02387.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02457.1","No alias","Brassica rapa","regulatory component B of PP2A phosphatase complexes","protein_coding"
"Brara.H02660.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02688.1","No alias","Brassica rapa","EC_2.1 transferase transferring one-carbon group & aminomethyltransferase component *(T-protein) of glycine cleavage system","protein_coding"
"Brara.H02694.1","No alias","Brassica rapa","proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex","protein_coding"
"Brara.H02737.1","No alias","Brassica rapa","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H03130.1","No alias","Brassica rapa","class XI myosin microfilament-based motor protein","protein_coding"
"Brara.I01256.1","No alias","Brassica rapa","subunit beta of succinyl-CoA ligase heterodimer","protein_coding"
"Brara.I01322.1","No alias","Brassica rapa","UDP-D-glucose 4-epimerase & EC_5.1 racemase or epimerase","protein_coding"
"Brara.I01422.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01811.1","No alias","Brassica rapa","S-nitrosoglutathione reductase *(GSNOR) & glutathione-dependent formaldehyde dehydrogenase *(FALDH)","protein_coding"
"Brara.I02094.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02153.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02157.1","No alias","Brassica rapa","allene oxidase cyclase *(AOC)","protein_coding"
"Brara.I02193.1","No alias","Brassica rapa","EC_3.6 hydrolase acting on acid anhydride & regulatory ATPase *(NSF/SEC18)","protein_coding"
"Brara.I02242.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02267.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02601.1","No alias","Brassica rapa","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I02700.1","No alias","Brassica rapa","metabolite transporter *(DTX)","protein_coding"
"Brara.I02745.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04092.1","No alias","Brassica rapa","Rab GTPase-activating protein","protein_coding"
"Brara.I04269.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04547.1","No alias","Brassica rapa","lysine-rich arabinogalactan protein","protein_coding"
"Brara.I04728.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04901.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05068.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05391.1","No alias","Brassica rapa","carotenoid isomerase *(CrtISO)","protein_coding"
"Brara.I05530.1","No alias","Brassica rapa","thioredoxin *(TRX-M)","protein_coding"
"Brara.J00876.1","No alias","Brassica rapa","trifunctional methylthioribulose-1-phosphate dehydratase/enolase/phosphatase *(DEP) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.J01008.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01198.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01461.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01859.1","No alias","Brassica rapa","dehydroascorbate reductase *(DHAR)","protein_coding"
"Brara.J02015.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02188.1","No alias","Brassica rapa","cytokinin phosphoribohydrolase *(LOG)","protein_coding"
"Brara.J02202.1","No alias","Brassica rapa","component *(NQO6/PSST) of NADH dehydrogenase electron output (module Q)","protein_coding"
"Brara.J02341.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02800.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.K00015.1","No alias","Brassica rapa","UDP-D-glucuronic acid decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.K00287.1","No alias","Brassica rapa","component *(MLH3) of MutLy endonuclease heterodimer","protein_coding"
"Brara.K00383.1","No alias","Brassica rapa","aspartate aminotransferase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Brara.K01431.1","No alias","Brassica rapa","HD-ZIP IV-type transcription factor","protein_coding"
"Brara.K01484.1","No alias","Brassica rapa","pectate lyase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Cre01.g000850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g010848","No alias","Chlamydomonas reinhardtii","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding"
"Cre01.g010864","No alias","Chlamydomonas reinhardtii","high chlorophyll fluorescent 109","protein_coding"
"Cre01.g052100","No alias","Chlamydomonas reinhardtii","Ribosomal L18p/L5e family protein","protein_coding"
"Cre02.g081000","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Cre02.g082877","No alias","Chlamydomonas reinhardtii","Seryl-tRNA synthetase","protein_coding"
"Cre02.g083950","No alias","Chlamydomonas reinhardtii","Ribosomal protein PSRP-3/Ycf65","protein_coding"
"Cre02.g101800","No alias","Chlamydomonas reinhardtii","Class I peptide chain release factor","protein_coding"
"Cre02.g107550","No alias","Chlamydomonas reinhardtii","Vacuolar iron transporter (VIT) family protein","protein_coding"
"Cre02.g109550","No alias","Chlamydomonas reinhardtii","aspartate kinase-homoserine dehydrogenase ii","protein_coding"
"Cre02.g143450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g147900","No alias","Chlamydomonas reinhardtii","Pyruvate kinase family protein","protein_coding"
"Cre03.g145747","No alias","Chlamydomonas reinhardtii","chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative","protein_coding"
"Cre03.g161400","No alias","Chlamydomonas reinhardtii","tryptophan synthase beta-subunit 2","protein_coding"
"Cre03.g164700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g165000","No alias","Chlamydomonas reinhardtii","Small GTP-binding protein","protein_coding"
"Cre03.g171100","No alias","Chlamydomonas reinhardtii","Chloroplast J-like domain 1","protein_coding"
"Cre03.g171950","No alias","Chlamydomonas reinhardtii","phosphoenolpyruvate carboxylase 4","protein_coding"
"Cre03.g175200","No alias","Chlamydomonas reinhardtii","translocon at the outer envelope membrane of chloroplasts 75-III","protein_coding"
"Cre03.g195650","No alias","Chlamydomonas reinhardtii","Ribosomal protein S10p/S20e family protein","protein_coding"
"Cre03.g201050","No alias","Chlamydomonas reinhardtii","thylakoid lumenal P17.1 protein","protein_coding"
"Cre03.g201850","No alias","Chlamydomonas reinhardtii","homolog of RAD54","protein_coding"
"Cre04.g211850","No alias","Chlamydomonas reinhardtii","Chlorophyll A-B binding family protein","protein_coding"
"Cre05.g237000","No alias","Chlamydomonas reinhardtii","methionine aminopeptidase 1D","protein_coding"
"Cre05.g241639","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g249750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g258733","No alias","Chlamydomonas reinhardtii","methylthioalkylmalate synthase-like 4","protein_coding"
"Cre06.g262650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g265800","No alias","Chlamydomonas reinhardtii","Ribosomal L28 family","protein_coding"
"Cre06.g278129","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278169","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278249","No alias","Chlamydomonas reinhardtii","aspartate aminotransferase","protein_coding"
"Cre06.g284650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g284700","No alias","Chlamydomonas reinhardtii","alanine aminotransferase 2","protein_coding"
"Cre06.g288650","No alias","Chlamydomonas reinhardtii","fatty acid desaturase 6","protein_coding"
"Cre06.g300550","No alias","Chlamydomonas reinhardtii","Histone H3 K4-specific methyltransferase SET7/9 family protein","protein_coding"
"Cre06.g300650","No alias","Chlamydomonas reinhardtii","MAK10 homologue","protein_coding"
"Cre07.g314150","No alias","Chlamydomonas reinhardtii","zeta-carotene desaturase","protein_coding"
"Cre07.g326950","No alias","Chlamydomonas reinhardtii","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Cre07.g334600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g339700","No alias","Chlamydomonas reinhardtii","non-intrinsic ABC protein 7","protein_coding"
"Cre07.g344350","No alias","Chlamydomonas reinhardtii","plastidic type i signal peptidase 1","protein_coding"
"Cre07.g344500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g352350","No alias","Chlamydomonas reinhardtii","FTSH protease 1","protein_coding"
"Cre08.g372000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g375900","No alias","Chlamydomonas reinhardtii","Eukaryotic translation initiation factor eIF2A family protein","protein_coding"
"Cre08.g376850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g380201","No alias","Chlamydomonas reinhardtii","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Cre09.g386200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g387875","No alias","Chlamydomonas reinhardtii","pyrophosphorylase 4","protein_coding"
"Cre09.g389393","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g389430","No alias","Chlamydomonas reinhardtii","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding"
"Cre09.g393876","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g398289","No alias","Chlamydomonas reinhardtii","Phospholipid/glycerol acyltransferase family protein","protein_coding"
"Cre09.g402950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g410650","No alias","Chlamydomonas reinhardtii","ATP phosphoribosyl transferase 2","protein_coding"
"Cre10.g423650","No alias","Chlamydomonas reinhardtii","plastid ribosomal protein l11","protein_coding"
"Cre10.g430501","No alias","Chlamydomonas reinhardtii","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Cre10.g433000","No alias","Chlamydomonas reinhardtii","glycine-tRNA ligases","protein_coding"
"Cre10.g449100","No alias","Chlamydomonas reinhardtii","Mitochondrial substrate carrier family protein","protein_coding"
"Cre10.g449350","No alias","Chlamydomonas reinhardtii","Peptidyl-tRNA hydrolase II (PTH2) family protein","protein_coding"
"Cre10.g451900","No alias","Chlamydomonas reinhardtii","Pyridoxal-5\'-phosphate-dependent enzyme family protein","protein_coding"
"Cre10.g456650","No alias","Chlamydomonas reinhardtii","LSD1-like 1","protein_coding"
"Cre10.g458500","No alias","Chlamydomonas reinhardtii","aspartate kinase 1","protein_coding"
"Cre12.g509650","No alias","Chlamydomonas reinhardtii","phytoene desaturase 3","protein_coding"
"Cre12.g513950","No alias","Chlamydomonas reinhardtii","non-intrinsic ABC protein 6","protein_coding"
"Cre12.g515950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g516200","No alias","Chlamydomonas reinhardtii","Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding"
"Cre12.g522626","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g532100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g546050","No alias","Chlamydomonas reinhardtii","1-deoxy-D-xylulose 5-phosphate reductoisomerase","protein_coding"
"Cre12.g554103","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre13.g562750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g573900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g581650","No alias","Chlamydomonas reinhardtii","ribosomal protein L12-A","protein_coding"
"Cre13.g602350","No alias","Chlamydomonas reinhardtii","Aldolase-type TIM barrel family protein","protein_coding"
"Cre14.g619100","No alias","Chlamydomonas reinhardtii","CLP protease proteolytic subunit 1","protein_coding"
"Cre14.g629650","No alias","Chlamydomonas reinhardtii","high-affinity nickel-transport family protein","protein_coding"
"Cre15.g643600","No alias","Chlamydomonas reinhardtii","ATP binding cassette protein 1","protein_coding"
"Cre16.g659850","No alias","Chlamydomonas reinhardtii","shikimate kinase like 2","protein_coding"
"Cre16.g662150","No alias","Chlamydomonas reinhardtii","cofactor assembly of complex C","protein_coding"
"Cre16.g673729","No alias","Chlamydomonas reinhardtii","chaperonin 20","protein_coding"
"Cre16.g684300","No alias","Chlamydomonas reinhardtii","YGGT family protein","protein_coding"
"Cre16.g685350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g686400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g696000","No alias","Chlamydomonas reinhardtii","N-acetylglucosamine-1-phosphate uridylyltransferase 1","protein_coding"
"Cre17.g697900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g734200","No alias","Chlamydomonas reinhardtii","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Cre17.g734300","No alias","Chlamydomonas reinhardtii","translocon outer complex protein 120","protein_coding"
"Cre48.g761197","No alias","Chlamydomonas reinhardtii","Ribosomal protein L3 family protein","protein_coding"
"evm.model.contig_2020.34","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2024.1","No alias","Porphyridium purpureum","(at1g24610 : 94.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (q43088|rbcmt_pea : 91.3) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.2","No alias","Porphyridium purpureum","(at5g26830 : 734.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.38","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2032.32","No alias","Porphyridium purpureum","(at4g30100 : 303.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G19120.1); Has 5876 Blast hits to 5615 proteins in 1104 species: Archae - 176; Bacteria - 1754; Metazoa - 1255; Fungi - 973; Plants - 640; Viruses - 179; Other Eukaryotes - 899 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2046.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2048.1","No alias","Porphyridium purpureum","(at4g02930 : 543.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (q9mup0|eftu_mesvi : 493.0) Elongation factor Tu (EF-Tu) - Mesostigma viride & (reliability: 1086.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2051.33","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2054.2","No alias","Porphyridium purpureum","(at3g20390 : 118.0) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2059.20","No alias","Porphyridium purpureum","(at2g18940 : 188.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 70772 Blast hits to 15680 proteins in 317 species: Archae - 4; Bacteria - 89; Metazoa - 1190; Fungi - 1125; Plants - 65689; Viruses - 0; Other Eukaryotes - 2675 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2068.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2084.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2089.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.13","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2121.5","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 221.0) no description available & (at3g47450 : 102.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 94.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (gnl|cdd|37260 : 85.5) no description available & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2126.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2136.4","No alias","Porphyridium purpureum","(at5g64840 : 262.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p56344|cysa_chlvu : 83.2) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2150.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2154.1","No alias","Porphyridium purpureum","(at2g40190 : 289.0) Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11).  Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in  endoplasmic reticulum membrane.; LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2190.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2190.8","No alias","Porphyridium purpureum","(at1g07670 : 621.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6atv4|aca2_orysa : 285.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 1242.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2216.3","No alias","Porphyridium purpureum","(at2g40290 : 269.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2251.1","No alias","Porphyridium purpureum","(at5g55920 : 395.0) Encodes a homolog of the S. cerevisiae Nop2 that is involved in ribosome biogenesis and plays a role on organ size control by promoting cell proliferation and preventing compensation in normal leaf development.; OLIGOCELLULA 2 (OLI2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: cell proliferation, leaf morphogenesis, root morphogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26600.1); Has 62513 Blast hits to 30741 proteins in 2867 species: Archae - 614; Bacteria - 24553; Metazoa - 13287; Fungi - 6403; Plants - 2067; Viruses - 622; Other Eukaryotes - 14967 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2262.8","No alias","Porphyridium purpureum","(at2g37860 : 163.0) Encodes a protein of unknown function.  Mutants have pale leaves, lower cell density in the palisade parenchyma and increased sensitivity to ozone and virulent Pseudomonas syringae; LOWER CELL DENSITY 1 (LCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: leaf development; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: reticulata-related 1 (TAIR:AT5G22790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2286.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2288.12","No alias","Porphyridium purpureum","(at1g72550 : 520.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2293.20","No alias","Porphyridium purpureum","(at3g21300 : 313.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2299.2","No alias","Porphyridium purpureum","(q02073|ch10c_spiol : 112.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (at5g20720 : 110.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2353.1","No alias","Porphyridium purpureum","(at3g57290 : 410.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2361.1","No alias","Porphyridium purpureum","(at2g29940 : 539.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5w274|pdr3_tobac : 525.0) Pleiotropic drug resistance protein 3 (NtPDR3) - Nicotiana tabacum (Common tobacco) & (reliability: 1078.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2393.2","No alias","Porphyridium purpureum","(at1g74260 : 1230.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2460.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3385.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3404.17","No alias","Porphyridium purpureum","(at5g45160 : 115.0) Root hair defective 3 GTP-binding protein (RHD3); FUNCTIONS IN: GTP binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT3G13870.1); Has 535 Blast hits to 521 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 186; Plants - 129; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3426.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3435.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3435.18","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3443.11","No alias","Porphyridium purpureum","(at4g11120 : 101.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3456.2","No alias","Porphyridium purpureum","(at3g15610 : 270.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3457.1","No alias","Porphyridium purpureum","(at3g04820 : 173.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, TruD (InterPro:IPR001656), Pseudouridine synthase TruD, eukaryotic (InterPro:IPR017091), Pseudouridine synthase, TruD, insertion domain (InterPro:IPR011760); Has 2276 Blast hits to 2198 proteins in 933 species: Archae - 260; Bacteria - 1262; Metazoa - 203; Fungi - 153; Plants - 61; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3462.1","No alias","Porphyridium purpureum","(at5g16750 : 203.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (p93107|pf20_chlre : 97.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3542.2","No alias","Porphyridium purpureum","(at1g10130 : 842.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (q6atv4|aca2_orysa : 307.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 1684.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3558.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3587.7","No alias","Porphyridium purpureum","(at5g55220 : 119.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3625.1","No alias","Porphyridium purpureum","(at2g13540 : 107.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008).  To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4398.8","No alias","Porphyridium purpureum","(at5g23010 : 152.0) Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.; methylthioalkylmalate synthase 1 (MAM1); FUNCTIONS IN: 2-(2'-methylthio)ethylmalate synthase activity; INVOLVED IN: glucosinolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), Pyruvate carboxyltransferase (InterPro:IPR000891); BEST Arabidopsis thaliana protein match is: 2-isopropylmalate synthase 2 (TAIR:AT5G23020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39891|leu1_soybn : 145.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4415.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4429.8","No alias","Porphyridium purpureum","(at3g06350 : 256.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4439.4","No alias","Porphyridium purpureum","(at3g26410 : 186.0) methyltransferases;nucleic acid binding; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative RNA methylase (InterPro:IPR000241), tRNA guanosine-2'-O-methyltransferase, TRM11 (InterPro:IPR016691), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 597 Blast hits to 588 proteins in 280 species: Archae - 150; Bacteria - 5; Metazoa - 158; Fungi - 132; Plants - 50; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4439.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_444.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4464.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.2","No alias","Porphyridium purpureum","(at3g03960 : 522.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (p54411|tcpe2_avesa : 234.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1044.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4491.4","No alias","Porphyridium purpureum","(at3g45890 : 160.0) Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes.  The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.; ROOT UVB SENSITIVE 1 (RUS1); INVOLVED IN: response to UV-B, developmental process; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: lateral root, root apical meristem, callus, elongation zone, embryonic root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT1G13770.1); Has 458 Blast hits to 456 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 116; Fungi - 71; Plants - 198; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.7","No alias","Porphyridium purpureum","(at4g30860 : 169.0) Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects.; SET domain group 4 (SDG4); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Post-SET domain (InterPro:IPR003616), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ASHH3 (TAIR:AT2G44150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4506.6","No alias","Porphyridium purpureum","(at3g08740 : 202.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor P (InterPro:IPR011768), Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722), Elongation factor P, C-terminal (InterPro:IPR015365), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor P/YeiP (InterPro:IPR020599); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT4G26310.1); Has 10499 Blast hits to 10498 proteins in 2700 species: Archae - 4; Bacteria - 7892; Metazoa - 1; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2521 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4509.2","No alias","Porphyridium purpureum","(at3g01120 : 171.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4523.5","No alias","Porphyridium purpureum","(at1g72440 : 162.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue.  Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_460.7","No alias","Porphyridium purpureum","(at2g39140 : 87.8) Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.; SUPPRESSOR OF VARIEGATION 1 (SVR1); CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), RNA-binding S4 (InterPro:IPR002942), Pseudouridine synthase, RsuA and RluB/E/F, conserved site (InterPro:IPR018496); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G43340.1); Has 12713 Blast hits to 12709 proteins in 2415 species: Archae - 0; Bacteria - 10639; Metazoa - 2; Fungi - 2; Plants - 70; Viruses - 0; Other Eukaryotes - 2000 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_4601.5","No alias","Porphyridium purpureum","(at4g13930 : 594.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (p50433|glym_soltu : 529.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (reliability: 1092.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_490.4","No alias","Porphyridium purpureum","(at3g07630 : 205.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis.  Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 2 (ADT2); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Amino acid-binding ACT (InterPro:IPR002912), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 1 (TAIR:AT1G11790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_496.10","No alias","Porphyridium purpureum","(at5g27120 : 425.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G05060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|68872 : 83.9) no description available & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_497.4","No alias","Porphyridium purpureum","(at3g57150 : 559.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (reliability: 1118.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_542.10","No alias","Porphyridium purpureum","(at5g19820 : 684.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1368.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_618.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_628.4","No alias","Porphyridium purpureum","(at4g13780 : 149.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 135.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_669.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_836.1","No alias","Porphyridium purpureum","(at2g37020 : 114.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000037.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.43","No alias","Cyanophora paradoxa","(at1g27320 : 171.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (o49230|etr1_braol : 165.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000073.47","No alias","Cyanophora paradoxa","(at2g02810 : 115.0) Encodes a multitransmembrane  hydrophobic protein that functions as transporter of UDP-galactose and UDP-glucose into the Golgi. Localized in the ER. Involved in the unfolded protein response, a mechanism that controls proper protein folding in the ER.; UDP-galactose transporter 1 (UTR1); CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 3 (TAIR:AT1G14360.1); Has 1052 Blast hits to 1046 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 150; Plants - 232; Viruses - 0; Other Eukaryotes - 167 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000074.2","No alias","Cyanophora paradoxa","(at3g06530 : 90.5) ARM repeat superfamily protein; CONTAINS InterPro DOMAIN/s: U3 small nucleolar RNA-associated protein 10 (InterPro:IPR022125), BP28, C-terminal (InterPro:IPR012954), Armadillo-type fold (InterPro:IPR016024). & (reliability: 181.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.68","No alias","Cyanophora paradoxa","(at2g17640 : 136.0) Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation.; ATSERAT3;1; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 3;2 (TAIR:AT4G35640.1); Has 24316 Blast hits to 24306 proteins in 2619 species: Archae - 371; Bacteria - 18535; Metazoa - 5; Fungi - 223; Plants - 313; Viruses - 18; Other Eukaryotes - 4851 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.77","No alias","Cyanophora paradoxa","(at1g55900 : 105.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000246.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000310.40","No alias","Cyanophora paradoxa","(at3g06350 : 137.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.60","No alias","Cyanophora paradoxa","(at5g11010 : 82.0) Pre-mRNA cleavage complex II protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655); BEST Arabidopsis thaliana protein match is: CLP-similar protein 3 (TAIR:AT3G04680.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 164.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000455.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000488.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.22","No alias","Cyanophora paradoxa","(at1g18160 : 170.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11850.1); Has 123759 Blast hits to 122075 proteins in 4739 species: Archae - 100; Bacteria - 12949; Metazoa - 47184; Fungi - 11113; Plants - 33371; Viruses - 486; Other Eukaryotes - 18556 (source: NCBI BLink). & (q8lkz1|nork_pea : 85.1) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000658.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000711.35","No alias","Cyanophora paradoxa","(at4g01810 : 231.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT2G21630.1); Has 8290 Blast hits to 5679 proteins in 621 species: Archae - 16; Bacteria - 1021; Metazoa - 2159; Fungi - 1153; Plants - 2353; Viruses - 447; Other Eukaryotes - 1141 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000769.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000802.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.21","No alias","Cyanophora paradoxa","(p37822|arog_soltu : 338.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) - Solanum tuberosum (Potato) & (at4g39980 : 334.0) Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (DHS1); CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3797 Blast hits to 3784 proteins in 681 species: Archae - 0; Bacteria - 1224; Metazoa - 0; Fungi - 110; Plants - 172; Viruses - 0; Other Eukaryotes - 2291 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001030.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.13","No alias","Cyanophora paradoxa","(at5g19820 : 548.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1096.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001030.14","No alias","Cyanophora paradoxa","(at5g19820 : 140.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.15","No alias","Cyanophora paradoxa","(at5g50340 : 211.0) ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001208.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001265.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020544.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.209","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.210","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020560.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021094.26","No alias","Cyanophora paradoxa","(at2g35920 : 157.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021137.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021275.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.58","No alias","Cyanophora paradoxa","(at1g19780 : 96.3) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel  8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.9","No alias","Cyanophora paradoxa","(at2g13440 : 398.0) glucose-inhibited division family A protein; FUNCTIONS IN: FAD binding; INVOLVED IN: tRNA processing, tRNA wobble uridine modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-inhibited division protein A-related (InterPro:IPR002218), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-inhibited division protein A (InterPro:IPR004416), Glucose-inhibited division protein A-related, conserved site (InterPro:IPR020595); Has 12829 Blast hits to 12787 proteins in 2525 species: Archae - 2; Bacteria - 6632; Metazoa - 144; Fungi - 175; Plants - 52; Viruses - 0; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021571.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G059400","No alias","Glycine max","Rubisco methyltransferase family protein","protein_coding"
"Glyma.01G082200","No alias","Glycine max","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Glyma.01G114900","No alias","Glycine max","alpha 1,4-glycosyltransferase family protein","protein_coding"
"Glyma.01G118900","No alias","Glycine max","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"Glyma.01G123900","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.01G131100","No alias","Glycine max","aspartate aminotransferase 1","protein_coding"
"Glyma.01G183500","No alias","Glycine max","sucrose nonfermenting 1(SNF1)-related protein kinase 2.3","protein_coding"
"Glyma.01G187700","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.01G215900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G228300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G005400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G023900","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.02G027600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G034900","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.02G048200","No alias","Glycine max","endonuclease/exonuclease/phosphatase family protein","protein_coding"
"Glyma.02G168100","No alias","Glycine max","calmodulin-binding family protein","protein_coding"
"Glyma.02G245600","No alias","Glycine max","Gibberellin-regulated family protein","protein_coding"
"Glyma.02G270400","No alias","Glycine max","plastid transcriptionally active 18","protein_coding"
"Glyma.03G014000","No alias","Glycine max","K+ efflux antiporter 2","protein_coding"
"Glyma.03G044100","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding"
"Glyma.03G050400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G109000","No alias","Glycine max","Lysyl-tRNA synthetase, class II","protein_coding"
"Glyma.03G129700","No alias","Glycine max","cystathionine beta-lyase","protein_coding"
"Glyma.03G158400","No alias","Glycine max","Aldolase-type TIM barrel family protein","protein_coding"
"Glyma.03G202900","No alias","Glycine max","chloroplast RNA-binding protein 33","protein_coding"
"Glyma.03G242400","No alias","Glycine max","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Glyma.03G243800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.03G262800","No alias","Glycine max","regulatory particle triple-A 1A","protein_coding"
"Glyma.04G086900","No alias","Glycine max","phosphofructokinase 3","protein_coding"
"Glyma.04G096633","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G120600","No alias","Glycine max","PLAC8 family protein","protein_coding"
"Glyma.04G210500","No alias","Glycine max","Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding"
"Glyma.04G217500","No alias","Glycine max","26S proteasome regulatory subunit, putative (RPN5)","protein_coding"
"Glyma.05G025800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G035900","No alias","Glycine max","RNA-dependent RNA polymerase 2","protein_coding"
"Glyma.05G134400","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.05G155900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G161200","No alias","Glycine max","Plant protein of unknown function (DUF641)","protein_coding"
"Glyma.05G248800","No alias","Glycine max","homeodomain GLABROUS 11","protein_coding"
"Glyma.06G055400","No alias","Glycine max","mechanosensitive channel of small conductance-like 10","protein_coding"
"Glyma.06G073800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G088600","No alias","Glycine max","phosphofructokinase 3","protein_coding"
"Glyma.06G091700","No alias","Glycine max","indoleacetic acid-induced protein 8","protein_coding"
"Glyma.06G107200","No alias","Glycine max","electron carriers;protein disulfide oxidoreductases","protein_coding"
"Glyma.06G119800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G139900","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.06G155700","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.06G204800","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.06G264200","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.06G265500","No alias","Glycine max","GRAS family transcription factor","protein_coding"
"Glyma.07G006600","No alias","Glycine max","translocon at the inner envelope membrane of chloroplasts 20","protein_coding"
"Glyma.07G081000","No alias","Glycine max","ABC transporter family protein","protein_coding"
"Glyma.07G124000","No alias","Glycine max","glutamate tRNA synthetase","protein_coding"
"Glyma.07G190300","No alias","Glycine max","riboflavin kinase/FMN hydrolase","protein_coding"
"Glyma.07G218200","No alias","Glycine max","cytochrome P450, family 706, subfamily A, polypeptide 6","protein_coding"
"Glyma.08G012600","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.08G062900","No alias","Glycine max","BAK1-interacting receptor-like kinase 1","protein_coding"
"Glyma.08G105800","No alias","Glycine max","MAC/Perforin domain-containing protein","protein_coding"
"Glyma.08G130600","No alias","Glycine max","Cellulase (glycosyl hydrolase family 5) protein","protein_coding"
"Glyma.08G177502","No alias","Glycine max","pyrimidine 2","protein_coding"
"Glyma.08G184100","No alias","Glycine max","protein-protein interaction regulator family protein","protein_coding"
"Glyma.08G189500","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.08G197400","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Glyma.08G207300","No alias","Glycine max","Coatomer, beta\' subunit","protein_coding"
"Glyma.08G250800","No alias","Glycine max","AGAMOUS-like 8","protein_coding"
"Glyma.09G030900","No alias","Glycine max","ADP-ribosylation factor A1E","protein_coding"
"Glyma.09G056050","No alias","Glycine max","receptor serine/threonine kinase, putative","protein_coding"
"Glyma.09G236300","No alias","Glycine max","Thioesterase superfamily protein","protein_coding"
"Glyma.09G254200","No alias","Glycine max","jasmonic acid carboxyl methyltransferase","protein_coding"
"Glyma.09G285700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G029950","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G062900","No alias","Glycine max","Cytochrome P450 superfamily protein","protein_coding"
"Glyma.10G078500","No alias","Glycine max","Putative lysine decarboxylase family protein","protein_coding"
"Glyma.10G140700","No alias","Glycine max","Proteasome component (PCI) domain protein","protein_coding"
"Glyma.10G158300","No alias","Glycine max","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"Glyma.10G173100","No alias","Glycine max","early nodulin-like protein 8","protein_coding"
"Glyma.10G239000","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.10G239900","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.10G263200","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding"
"Glyma.11G068100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G076100","No alias","Glycine max","Plant protein of unknown function (DUF869)","protein_coding"
"Glyma.11G121600","No alias","Glycine max","plastid division2","protein_coding"
"Glyma.11G138502","No alias","Glycine max","SCARECROW-like 14","protein_coding"
"Glyma.11G139100","No alias","Glycine max","expansin A4","protein_coding"
"Glyma.11G154200","No alias","Glycine max","uridine 5\'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)","protein_coding"
"Glyma.11G167100","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.11G196300","No alias","Glycine max","BEL1-like homeodomain 8","protein_coding"
"Glyma.11G200300","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.11G252500","No alias","Glycine max","15-cis-zeta-carotene isomerase","protein_coding"
"Glyma.12G014100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G020700","No alias","Glycine max","tRNA synthetase class I (I, L, M and V) family protein","protein_coding"
"Glyma.12G027651","No alias","Glycine max","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding"
"Glyma.12G053400","No alias","Glycine max","calcium-dependent protein kinase 24","protein_coding"
"Glyma.12G062300","No alias","Glycine max","TRF-like 2","protein_coding"
"Glyma.12G077900","No alias","Glycine max","Protein of unknown function, DUF547","protein_coding"
"Glyma.12G106900","No alias","Glycine max","NAD(P)H dehydrogenase B3","protein_coding"
"Glyma.12G122266","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G133800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G146600","No alias","Glycine max","ubiquitin-specific protease 14","protein_coding"
"Glyma.12G153600","No alias","Glycine max","VQ motif-containing protein","protein_coding"
"Glyma.12G162945","No alias","Glycine max","UDP-D-apiose/UDP-D-xylose synthase 1","protein_coding"
"Glyma.12G223000","No alias","Glycine max","GTP-binding family protein","protein_coding"
"Glyma.12G242400","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"Glyma.13G010100","No alias","Glycine max","AMP-dependent synthetase and ligase family protein","protein_coding"
"Glyma.13G042100","No alias","Glycine max","Protein phosphatase 2C family protein","protein_coding"
"Glyma.13G059300","No alias","Glycine max","Saccharopine dehydrogenase","protein_coding"
"Glyma.13G063500","No alias","Glycine max","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"Glyma.13G068100","No alias","Glycine max","golgi alpha-mannosidase II","protein_coding"
"Glyma.13G075100","No alias","Glycine max","serine carboxypeptidase-like 11","protein_coding"
"Glyma.13G116000","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"Glyma.13G128200","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G141800","No alias","Glycine max","5\'-AMP-activated protein kinase-related","protein_coding"
"Glyma.13G152134","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G156200","No alias","Glycine max","DROUGHT SENSITIVE 1","protein_coding"
"Glyma.13G164300","No alias","Glycine max","serine-rich protein-related","protein_coding"
"Glyma.13G208500","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.13G221200","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.13G275100","No alias","Glycine max","phytosylfokine-alpha receptor 2","protein_coding"
"Glyma.13G345000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.13G349100","No alias","Glycine max","glyoxylate reductase 2","protein_coding"
"Glyma.14G001400","No alias","Glycine max","exocyst complex component sec15B","protein_coding"
"Glyma.14G025600","No alias","Glycine max","chloroplastic lipocalin","protein_coding"
"Glyma.14G070100","No alias","Glycine max","GTP1/OBG family protein","protein_coding"
"Glyma.14G124900","No alias","Glycine max","FTSH protease 11","protein_coding"
"Glyma.14G142100","No alias","Glycine max","signal peptide peptidase","protein_coding"
"Glyma.14G183400","No alias","Glycine max","Rhamnogalacturonate lyase family protein","protein_coding"
"Glyma.14G183800","No alias","Glycine max","AGAMOUS-like 16","protein_coding"
"Glyma.15G009000","No alias","Glycine max","RHOMBOID-like protein 5","protein_coding"
"Glyma.15G010600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G076800","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Glyma.15G101300","No alias","Glycine max","BSD domain-containing protein","protein_coding"
"Glyma.15G111100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G151000","No alias","Glycine max","sucrose synthase 2","protein_coding"
"Glyma.15G204933","No alias","Glycine max","XH/XS domain-containing protein","protein_coding"
"Glyma.15G210800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G230600","No alias","Glycine max","Protein of unknown function (DUF810)","protein_coding"
"Glyma.15G233400","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Glyma.15G242800","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.16G066300","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.16G078800","No alias","Glycine max","Protein kinase family protein with leucine-rich repeat domain","protein_coding"
"Glyma.16G154900","No alias","Glycine max","Expressed protein","protein_coding"
"Glyma.16G158000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G161000","No alias","Glycine max","Plant protein of unknown function (DUF247)","protein_coding"
"Glyma.16G165400","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.16G166600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G169000","No alias","Glycine max","receptor like protein 32","protein_coding"
"Glyma.16G201800","No alias","Glycine max","HXXXD-type acyl-transferase family protein","protein_coding"
"Glyma.17G000400","No alias","Glycine max","Transcription initiation Spt4-like protein","protein_coding"
"Glyma.17G002800","No alias","Glycine max","NAC domain containing protein 35","protein_coding"
"Glyma.17G034600","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.17G053900","No alias","Glycine max","recA DNA recombination family protein","protein_coding"
"Glyma.17G088000","No alias","Glycine max","cysteine-rich RLK (RECEPTOR-like protein kinase) 42","protein_coding"
"Glyma.17G093302","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.17G099100","No alias","Glycine max","TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14","protein_coding"
"Glyma.17G224000","No alias","Glycine max","Major facilitator superfamily protein","protein_coding"
"Glyma.18G045800","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.18G282900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G300700","No alias","Glycine max","SIGNAL PEPTIDE PEPTIDASE-LIKE 3","protein_coding"
"Glyma.19G061400","No alias","Glycine max","NFU domain protein 4","protein_coding"
"Glyma.19G074150","No alias","Glycine max","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.19G120100","No alias","Glycine max","Co-chaperone GrpE family protein","protein_coding"
"Glyma.19G216400","No alias","Glycine max","Prolyl oligopeptidase family protein","protein_coding"
"Glyma.19G226800","No alias","Glycine max","NIM1-interacting 1","protein_coding"
"Glyma.19G239800","No alias","Glycine max","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Glyma.19G256500","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.19G259200","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.20G030900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G045600","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.20G056400","No alias","Glycine max","haloacid dehalogenase (HAD) superfamily protein","protein_coding"
"Glyma.20G095432","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.20G117700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G153700","No alias","Glycine max","K-box region and MADS-box transcription factor family protein","protein_coding"
"Glyma.20G200133","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.20G213400","No alias","Glycine max","ATP-dependent Clp protease","protein_coding"
"Glyma.20G228200","No alias","Glycine max","Cytidine/deoxycytidylate deaminase family protein","protein_coding"
"Glyma.20G230300","No alias","Glycine max","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Glyma.20G234400","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.20G244100","No alias","Glycine max","peptidase M1 family protein","protein_coding"
"Glyma.20G244200","No alias","Glycine max","tonneau 1b (TON1b)","protein_coding"
"Glyma.U032305","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"GRMZM2G014376","No alias","Zea mays","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"GRMZM2G024005","No alias","Zea mays","Predicted AT-hook DNA-binding family protein","protein_coding"
"GRMZM2G025105","No alias","Zea mays","polygalacturonase inhibiting protein 1","protein_coding"
"GRMZM2G026958","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G027130","No alias","Zea mays","Chalcone and stilbene synthase family protein","protein_coding"
"GRMZM2G039934","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G041181","No alias","Zea mays","secretory carrier 3","protein_coding"
"GRMZM2G041732","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G044237","No alias","Zea mays","arginine biosynthesis protein ArgJ family","protein_coding"
"GRMZM2G046676","No alias","Zea mays","SNF7 family protein","protein_coding"
"GRMZM2G051270","No alias","Zea mays","Pseudouridine synthase/archaeosine transglycosylase-like family protein","protein_coding"
"GRMZM2G052483","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G055158","No alias","Zea mays","myb domain protein 20","protein_coding"
"GRMZM2G056088","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G057268","No alias","Zea mays","Ribosomal protein S4 (RPS4A) family protein","protein_coding"
"GRMZM2G058032","No alias","Zea mays","Heavy metal transport/detoxification superfamily protein","protein_coding"
"GRMZM2G075563","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G076636","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"GRMZM2G077034","No alias","Zea mays","Gibberellin-regulated family protein","protein_coding"
"GRMZM2G079468","No alias","Zea mays","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"GRMZM2G088361","No alias","Zea mays","calcium-dependent protein kinase 13","protein_coding"
"GRMZM2G100864","No alias","Zea mays","Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein","protein_coding"
"GRMZM2G101916","No alias","Zea mays","early nodulin-like protein 9","protein_coding"
"GRMZM2G104401","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G115635","No alias","Zea mays","Xanthine/uracil permease family protein","protein_coding"
"GRMZM2G126795","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G128608","No alias","Zea mays","RING/FYVE/PHD-type zinc finger family protein","protein_coding"
"GRMZM2G132504","No alias","Zea mays","PHD finger family protein","protein_coding"
"GRMZM2G133213","No alias","Zea mays","NADH:cytochrome B5 reductase 1","protein_coding"
"GRMZM2G135444","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding"
"GRMZM2G137421","No alias","Zea mays","nitrate transporter 1:2","protein_coding"
"GRMZM2G145201","No alias","Zea mays","RNA-dependent RNA polymerase 6","protein_coding"
"GRMZM2G154752","No alias","Zea mays","cytochrome P450, family 76, subfamily C, polypeptide 2","protein_coding"
"GRMZM2G158177","No alias","Zea mays","Protein kinase family protein","protein_coding"
"GRMZM2G164074","No alias","Zea mays","cytochrome P450, family 94, subfamily B, polypeptide 3","protein_coding"
"GRMZM2G164562","No alias","Zea mays","chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative","protein_coding"
"GRMZM2G171408","No alias","Zea mays","ARM repeat superfamily protein","protein_coding"
"GRMZM2G172019","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G173630","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G175423","No alias","Zea mays","GroES-like zinc-binding alcohol dehydrogenase family protein","protein_coding"
"GRMZM2G177617","No alias","Zea mays","Acid phosphatase/vanadium-dependent haloperoxidase-related protein","protein_coding"
"GRMZM2G303374","No alias","Zea mays","sulfurtransferase 18","protein_coding"
"GRMZM2G314652","No alias","Zea mays","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"GRMZM2G317285","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G379237","No alias","Zea mays","Class I glutamine amidotransferase-like superfamily protein","protein_coding"
"GRMZM2G402309","No alias","Zea mays","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding"
"GRMZM2G404078","No alias","Zea mays","mitogen-activated protein kinase kinase kinase 15","protein_coding"
"GRMZM2G411032","No alias","Zea mays","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"GRMZM2G478238","No alias","Zea mays","HEAT SHOCK PROTEIN 89.1","protein_coding"
"GRMZM2G700118","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G804881","No alias","Zea mays","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"GRMZM5G819384","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G826714","No alias","Zea mays","COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family","protein_coding"
"GRMZM5G838367","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G840435","No alias","Zea mays","folate transporter 1","protein_coding"
"GRMZM5G873681","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G873964","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G889760","No alias","Zea mays","myosin heavy chain-related","protein_coding"
"GRMZM5G897067","No alias","Zea mays","Cystathionine beta-synthase (CBS) family protein","protein_coding"
"HORVU0Hr1G000370.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G006520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G016820.2","No alias","Hordeum vulgare","DYRK protein kinase & protein kinase *(YAK1) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU0Hr1G035760.1","No alias","Hordeum vulgare","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"HORVU0Hr1G039150.3","No alias","Hordeum vulgare","SBP-type transcription factor","protein_coding"
"HORVU1Hr1G002740.1","No alias","Hordeum vulgare","regulatory protein *(RLD) of gravity sensing","protein_coding"
"HORVU1Hr1G016540.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G021130.2","No alias","Hordeum vulgare","asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"HORVU1Hr1G022810.1","No alias","Hordeum vulgare","protein disulfide isomerase *(PDI-S) & protein disulfide isomerase *(PDI-A)","protein_coding"
"HORVU1Hr1G022990.1","No alias","Hordeum vulgare","co-chaperone component *(ERdj3b) of ERdj3B-BiP-SDF2 chaperone complex","protein_coding"
"HORVU1Hr1G032060.4","No alias","Hordeum vulgare","component *(eS1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU1Hr1G034400.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G043090.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G048480.10","No alias","Hordeum vulgare","membrane insertase (Oxa1) of cytochrome c oxidase assembly & insertase component *(Oxa1) of inner mitochondrion membrane presequence-dependent insertion system","protein_coding"
"HORVU1Hr1G062930.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G080460.7","No alias","Hordeum vulgare","type-I inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"HORVU2Hr1G005650.6","No alias","Hordeum vulgare","adaptor protein exchange factor *(CAND1)","protein_coding"
"HORVU2Hr1G011100.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G012860.1","No alias","Hordeum vulgare","translation termination factor *(eRF3)","protein_coding"
"HORVU2Hr1G037820.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G060240.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G067390.3","No alias","Hordeum vulgare","component *(U11-48K) of U11 snRNP complex","protein_coding"
"HORVU2Hr1G078350.3","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(FKBP43/53)","protein_coding"
"HORVU2Hr1G086930.1","No alias","Hordeum vulgare","B-G-class Rab-GDF protein","protein_coding"
"HORVU2Hr1G119920.8","No alias","Hordeum vulgare","regulatory protein (PARC6) of plastid division FtsZ assembly","protein_coding"
"HORVU2Hr1G124740.1","No alias","Hordeum vulgare","solute transporter *(UmamiT)","protein_coding"
"HORVU3Hr1G012410.6","No alias","Hordeum vulgare","EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase","protein_coding"
"HORVU3Hr1G017090.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G024170.3","No alias","Hordeum vulgare","EC_1.6 oxidoreductase acting on NADH or NADPH","protein_coding"
"HORVU3Hr1G045480.6","No alias","Hordeum vulgare","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"HORVU3Hr1G063060.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G097820.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G104290.2","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU3Hr1G108500.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G002170.5","No alias","Hordeum vulgare","component *(NOT3) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"HORVU4Hr1G023430.1","No alias","Hordeum vulgare","obtusifoliol 14-alpha demethylase & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU4Hr1G032770.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G044790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G046720.2","No alias","Hordeum vulgare","pre-60S ribosomal subunit assembly factor *(SSF1)","protein_coding"
"HORVU4Hr1G067520.2","No alias","Hordeum vulgare","subunit alpha of class-II glucosidase II complex & EC_3.2 glycosylase","protein_coding"
"HORVU4Hr1G068420.12","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding"
"HORVU4Hr1G071270.5","No alias","Hordeum vulgare","tRNA cytidine acetyltransferase","protein_coding"
"HORVU4Hr1G073380.1","No alias","Hordeum vulgare","actin-binding protein *(NET1)","protein_coding"
"HORVU4Hr1G090490.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G007340.2","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G009650.20","No alias","Hordeum vulgare","ARF-type transcription factor","protein_coding"
"HORVU5Hr1G011170.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G026170.7","No alias","Hordeum vulgare","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"HORVU5Hr1G033560.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G053310.3","No alias","Hordeum vulgare","component *(TOP6B) of somatic DNA topoisomerase VI complex","protein_coding"
"HORVU5Hr1G062160.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G063540.6","No alias","Hordeum vulgare","ligand-gated cation channel *(GLR)","protein_coding"
"HORVU5Hr1G064220.7","No alias","Hordeum vulgare","component *(AUG8) of Augmin gamma-TuRC recruiting complex","protein_coding"
"HORVU5Hr1G068490.1","No alias","Hordeum vulgare","calcium sensor *(CML)","protein_coding"
"HORVU5Hr1G074490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G091160.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G094290.9","No alias","Hordeum vulgare","calcium sensor *(CML)","protein_coding"
"HORVU5Hr1G097860.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G104390.2","No alias","Hordeum vulgare","methylation reader *(ECT)","protein_coding"
"HORVU5Hr1G109550.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G117720.3","No alias","Hordeum vulgare","protease *(SPF)","protein_coding"
"HORVU5Hr1G118690.6","No alias","Hordeum vulgare","hydroxylase *(COQ6)","protein_coding"
"HORVU5Hr1G125630.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G003470.2","No alias","Hordeum vulgare","EC_2.6 transferase transferring nitrogenous group & aspartate aminotransferase","protein_coding"
"HORVU6Hr1G016970.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G044850.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G049950.1","No alias","Hordeum vulgare","cryptochrome photoreceptor *(CRY)","protein_coding"
"HORVU6Hr1G052500.5","No alias","Hordeum vulgare","NEK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G056180.4","No alias","Hordeum vulgare","component *(mS77) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU6Hr1G057570.8","No alias","Hordeum vulgare","phosphorolytic exoribonuclease *(PNP) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G058830.1","No alias","Hordeum vulgare","phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase","protein_coding"
"HORVU6Hr1G060990.1","No alias","Hordeum vulgare","programmed cell death cysteine proteinase *(VPE) & C13-class (Legumain) asparaginyl endopeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU6Hr1G062930.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(HUB)","protein_coding"
"HORVU6Hr1G070900.1","No alias","Hordeum vulgare","microtubule-associated protein *(MAP65-2)","protein_coding"
"HORVU6Hr1G071910.3","No alias","Hordeum vulgare","scaffold component *(VCS) of mRNA decapping complex","protein_coding"
"HORVU6Hr1G072030.1","No alias","Hordeum vulgare","rRNA methyltransferase *(NOP2)","protein_coding"
"HORVU6Hr1G080790.1","No alias","Hordeum vulgare","alpha amylase","protein_coding"
"HORVU6Hr1G094580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G029770.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G051570.2","No alias","Hordeum vulgare","EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"HORVU7Hr1G063770.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G072680.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G079830.12","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G082450.1","No alias","Hordeum vulgare","tyrosine aminotransferase *(TAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"HORVU7Hr1G084140.8","No alias","Hordeum vulgare","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G085050.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G087210.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G095060.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G113830.3","No alias","Hordeum vulgare","WRKY-type transcription factor","protein_coding"
"HORVU7Hr1G118380.1","No alias","Hordeum vulgare","component *(SPCs3) of SPC endoplasmic signal peptidase complex","protein_coding"
"Kfl00004_0160","kfl00004_0160_v1.1","Klebsormidium nitens","(at3g54650 : 149.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0390","kfl00005_0390_v1.1","Klebsormidium nitens","(at1g74850 : 553.0) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.; plastid transcriptionally active 2 (PTAC2); INVOLVED IN: positive regulation of transcription, DNA-dependent, transcription from plastid promoter; LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 58866 Blast hits to 15377 proteins in 307 species: Archae - 6; Bacteria - 74; Metazoa - 884; Fungi - 1027; Plants - 54432; Viruses - 0; Other Eukaryotes - 2443 (source: NCBI BLink). & (q76c99|rf1_orysa : 189.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"Kfl00014_0530","kfl00014_0530_v1.1","Klebsormidium nitens","(at2g34357 : 506.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), Domain of unknown function, NUC173 (InterPro:IPR012978); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G23540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"Kfl00019_0230","kfl00019_0230_v1.1","Klebsormidium nitens","(at5g03415 : 226.0) Encodes a homolog of the animal DP protein.  DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.; DPB; CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Transcription factor DP, C-terminal (InterPro:IPR014889), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor DP (InterPro:IPR015648), Transcription factor DP, subgroup (InterPro:IPR016556); BEST Arabidopsis thaliana protein match is: Transcription factor DP (TAIR:AT5G02470.3). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0450","kfl00024_0450_v1.1","Klebsormidium nitens","(at5g40480 : 839.0) embryo defective 3012 (EMB3012); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964), Bacterial Ig-like, group 2 (InterPro:IPR003343); Has 264 Blast hits to 238 proteins in 89 species: Archae - 0; Bacteria - 31; Metazoa - 150; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 1678.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0500","kfl00024_0500_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00025_0370","kfl00025_0370_v1.1","Klebsormidium nitens","(at2g06210 : 769.0) Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit.  Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin.  Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.; EARLY FLOWERING 8 (ELF8); FUNCTIONS IN: binding; INVOLVED IN: positive regulation of transcription, DNA-dependent, histone methylation, negative regulation of flower development; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 39956 Blast hits to 25035 proteins in 1980 species: Archae - 1189; Bacteria - 13149; Metazoa - 9789; Fungi - 2497; Plants - 1315; Viruses - 192; Other Eukaryotes - 11825 (source: NCBI BLink). & (reliability: 1538.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0050","kfl00026_0050_v1.1","Klebsormidium nitens","(at5g45140 : 1509.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C2 (NRPC2); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase Rpb2, domain 4 (InterPro:IPR007646), RNA polymerase Rpb2, domain 5 (InterPro:IPR007647), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1); Has 31946 Blast hits to 25220 proteins in 8516 species: Archae - 496; Bacteria - 14545; Metazoa - 599; Fungi - 7189; Plants - 2320; Viruses - 240; Other Eukaryotes - 6557 (source: NCBI BLink). & (p60283|rpob_phypa : 163.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Physcomitrella patens (Moss) & (reliability: 3018.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0540","kfl00026_0540_v1.1","Klebsormidium nitens","(at5g40360 : 115.0) putative transcription factor (MYB115); myb domain protein 115 (MYB115); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93417|gam1_orysa : 95.9) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0420","kfl00028_0420_v1.1","Klebsormidium nitens","(at3g15550 : 153.0) unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0270","kfl00029_0270_v1.1","Klebsormidium nitens","(at5g44635 : 779.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 281.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0270","kfl00030_0270_v1.1","Klebsormidium nitens","(at5g66750 : 640.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 439.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0500","kfl00031_0500_v1.1","Klebsormidium nitens","(at5g41790 : 99.4) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"Kfl00040_0420","kfl00040_0420_v1.1","Klebsormidium nitens","(at1g48360 : 150.0) zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HIP116, Rad5p N-terminal (InterPro:IPR014905); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"Kfl00041_0010","kfl00041_0010_v1.1","Klebsormidium nitens","(at1g65900 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"Kfl00041_g2","kfl00041_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00043_0150","kfl00043_0150_v1.1","Klebsormidium nitens","(at4g34570 : 494.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 2 (THY-2); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 13567 Blast hits to 13544 proteins in 2627 species: Archae - 73; Bacteria - 8801; Metazoa - 517; Fungi - 428; Plants - 92; Viruses - 256; Other Eukaryotes - 3400 (source: NCBI BLink). & (o81395|drts_maize : 493.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Zea mays (Maize) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0380","kfl00045_0380_v1.1","Klebsormidium nitens","(at5g63420 : 749.0) embryo defective 2746 (emb2746); FUNCTIONS IN: hydrolase activity, DNA binding, catalytic activity; INVOLVED IN: metabolic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1498.0) &  (original description: no original description)","protein_coding"
"Kfl00049_0150","kfl00049_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00050_0330","kfl00050_0330_v1.1","Klebsormidium nitens","(at4g14570 : 607.0) acylaminoacyl-peptidase-related; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G36210.1); Has 9037 Blast hits to 9017 proteins in 1444 species: Archae - 238; Bacteria - 5246; Metazoa - 1023; Fungi - 365; Plants - 298; Viruses - 0; Other Eukaryotes - 1867 (source: NCBI BLink). & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"Kfl00051_0100","kfl00051_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00054_0230","kfl00054_0230_v1.1","Klebsormidium nitens","(at5g42480 : 82.4) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts.  Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00054_0235","kfl00054_0235_v1.1","Klebsormidium nitens","(at5g42480 : 110.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts.  Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"Kfl00056_0050","kfl00056_0050_v1.1","Klebsormidium nitens","(q43715|toc75_pea : 322.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (at3g46740 : 307.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"Kfl00059_0100","kfl00059_0100_v1.1","Klebsormidium nitens","(at3g03710 : 796.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase).  Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 1592.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0350","kfl00060_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00061_0280","kfl00061_0280_v1.1","Klebsormidium nitens","(at1g08260 : 1660.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 3320.0) &  (original description: no original description)","protein_coding"
"Kfl00067_0060","kfl00067_0060_v1.1","Klebsormidium nitens","(at2g01120 : 291.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00068_0320","kfl00068_0320_v1.1","Klebsormidium nitens","(at1g29880 : 731.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0130","kfl00069_0130_v1.1","Klebsormidium nitens","(at5g22010 : 421.0) replication factor C1 (RFC1); FUNCTIONS IN: DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex, intracellular; CONTAINS InterPro DOMAIN/s: DNA replication factor RFC1, C-terminal (InterPro:IPR013725), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA replication factor C, large subunit (InterPro:IPR012178), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G04730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"Kfl00076_0270","kfl00076_0270_v1.1","Klebsormidium nitens","(at2g32240 : 110.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"Kfl00101_0070","kfl00101_0070_v1.1","Klebsormidium nitens","(at5g50920 : 1253.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 1246.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 2506.0) &  (original description: no original description)","protein_coding"
"Kfl00103_0150","kfl00103_0150_v1.1","Klebsormidium nitens","(at1g73980 : 630.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 4488 Blast hits to 4465 proteins in 1702 species: Archae - 37; Bacteria - 3307; Metazoa - 347; Fungi - 118; Plants - 328; Viruses - 2; Other Eukaryotes - 349 (source: NCBI BLink). & (reliability: 1260.0) &  (original description: no original description)","protein_coding"
"Kfl00106_0070","kfl00106_0070_v1.1","Klebsormidium nitens","(at5g16715 : 1236.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (reliability: 2472.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0070","kfl00121_0070_v1.1","Klebsormidium nitens","(at4g33760 : 739.0) tRNA synthetase class II (D, K and N) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type (InterPro:IPR004524), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal (InterPro:IPR018153), GAD domain (InterPro:IPR004115); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 1478.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0170","kfl00121_0170_v1.1","Klebsormidium nitens","(at5g54260 : 676.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00125_0130","kfl00125_0130_v1.1","Klebsormidium nitens","(at1g63660 : 770.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1540.0) &  (original description: no original description)","protein_coding"
"Kfl00128_0270","kfl00128_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00130_0230","kfl00130_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00135_0100","kfl00135_0100_v1.1","Klebsormidium nitens","(at5g41880 : 457.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"Kfl00139_0190","kfl00139_0190_v1.1","Klebsormidium nitens","(at4g15900 : 578.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear  WD40 protein that is imported into the nucleus.  Essential for plant innate immunity.  Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (p93107|pf20_chlre : 118.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0340","kfl00144_0340_v1.1","Klebsormidium nitens","(at5g20990 : 432.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"Kfl00145_0210","kfl00145_0210_v1.1","Klebsormidium nitens","(o04235|ssrp1_vicfa : 554.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (at3g28730 : 540.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"Kfl00153_0160","kfl00153_0160_v1.1","Klebsormidium nitens","(at4g02070 : 834.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.; MUTS homolog 6 (MSH6); FUNCTIONS IN: damaged DNA binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein Msh6 (InterPro:IPR017261), DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), Tudor domain (InterPro:IPR002999); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1). & (q9xgc9|msh2_maize : 175.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1668.0) &  (original description: no original description)","protein_coding"
"Kfl00160_0100","kfl00160_0100_v1.1","Klebsormidium nitens","(at3g55160 : 416.0) unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"Kfl00165_0140","kfl00165_0140_v1.1","Klebsormidium nitens","(at4g29910 : 184.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00166_0230","kfl00166_0230_v1.1","Klebsormidium nitens","(q43011|asns_orysa : 813.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) - Oryza sativa (Rice) & (at5g10240 : 810.0) Encodes asparagine synthetase (ASN3).; asparagine synthetase 3 (ASN3); FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity; INVOLVED IN: asparagine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 2 (TAIR:AT5G65010.1); Has 13137 Blast hits to 12731 proteins in 2385 species: Archae - 388; Bacteria - 8359; Metazoa - 215; Fungi - 297; Plants - 415; Viruses - 9; Other Eukaryotes - 3454 (source: NCBI BLink). & (reliability: 1620.0) &  (original description: no original description)","protein_coding"
"Kfl00168_0120","kfl00168_0120_v1.1","Klebsormidium nitens","(at3g48000 : 408.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (o24174|badh_orysa : 327.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 816.0) &  (original description: no original description)","protein_coding"
"Kfl00175_0130","kfl00175_0130_v1.1","Klebsormidium nitens","(at5g03690 : 550.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT2G36460.1); Has 5010 Blast hits to 5004 proteins in 974 species: Archae - 0; Bacteria - 706; Metazoa - 1412; Fungi - 8; Plants - 478; Viruses - 0; Other Eukaryotes - 2406 (source: NCBI BLink). & (p17784|alf_orysa : 546.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"Kfl00178_0050","kfl00178_0050_v1.1","Klebsormidium nitens","(at5g19690 : 554.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"Kfl00180_0210","kfl00180_0210_v1.1","Klebsormidium nitens","(at4g29540 : 345.0) bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"Kfl00201_0060","kfl00201_0060_v1.1","Klebsormidium nitens","(p50218|idhc_tobac : 687.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (at1g65930 : 684.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (reliability: 1368.0) &  (original description: no original description)","protein_coding"
"Kfl00204_0110","kfl00204_0110_v1.1","Klebsormidium nitens","(at4g30920 : 486.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, protein metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30910.1); Has 9817 Blast hits to 9813 proteins in 2024 species: Archae - 18; Bacteria - 5432; Metazoa - 663; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3545 (source: NCBI BLink). & (q6k669|ampl2_orysa : 481.0) Leucine aminopeptidase 2, chloroplast precursor (EC 3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase 2) - Oryza sativa (Rice) & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00212_0060","kfl00212_0060_v1.1","Klebsormidium nitens","(at4g23940 : 379.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 278.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"Kfl00217_0140","kfl00217_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00250_0090","kfl00250_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00257_0140","kfl00257_0140_v1.1","Klebsormidium nitens","(at3g06350 : 423.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"Kfl00264_0240","kfl00264_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00268_0050","kfl00268_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00289_0160","kfl00289_0160_v1.1","Klebsormidium nitens","(q41651|cypb_vicfa : 197.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (at3g62030 : 192.0) nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; rotamase CYP 4 (ROC4); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"Kfl00291_0110","kfl00291_0110_v1.1","Klebsormidium nitens","(at4g21530 : 313.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 2387 Blast hits to 1893 proteins in 265 species: Archae - 2; Bacteria - 820; Metazoa - 693; Fungi - 413; Plants - 211; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00305_0070","kfl00305_0070_v1.1","Klebsormidium nitens","(at1g74030 : 598.0) Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.; enolase 1 (ENO1); FUNCTIONS IN: phosphopyruvate hydratase activity; INVOLVED IN: trichome morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13710 Blast hits to 13689 proteins in 3755 species: Archae - 283; Bacteria - 5826; Metazoa - 2303; Fungi - 284; Plants - 460; Viruses - 0; Other Eukaryotes - 4554 (source: NCBI BLink). & (q43130|eno_mescr : 542.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"Kfl00306_0020","kfl00306_0020_v1.1","Klebsormidium nitens","(at3g48500 : 155.0) PIGMENT DEFECTIVE 312 (PDE312); LOCATED IN: plastid chromosome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 95 Blast hits to 93 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 14; Plants - 42; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"Kfl00307_0080","kfl00307_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00336_0090","kfl00336_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00340_0020","kfl00340_0020_v1.1","Klebsormidium nitens","(at4g33680 : 587.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"Kfl00357_0110","kfl00357_0110_v1.1","Klebsormidium nitens","(at5g52560 : 723.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1446.0) &  (original description: no original description)","protein_coding"
"Kfl00360_0090","kfl00360_0090_v1.1","Klebsormidium nitens","(at4g04350 : 1214.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (reliability: 2428.0) &  (original description: no original description)","protein_coding"
"Kfl00376_0100","kfl00376_0100_v1.1","Klebsormidium nitens","(q6es10|hat1_orysa : 137.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (at5g56740 : 130.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of  lysine 12 of histone H4 reduces radioactive acetylation by  HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00404_0120","kfl00404_0120_v1.1","Klebsormidium nitens","(at3g16810 : 260.0) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0040","kfl00425_0040_v1.1","Klebsormidium nitens","(at1g80560 : 526.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 521.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"Kfl00431_0060","kfl00431_0060_v1.1","Klebsormidium nitens","(at3g25660 : 580.0) Amidase family protein; FUNCTIONS IN: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: translation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120), Glutamyl-tRNA(Gln) amidotransferase A subunit (InterPro:IPR004412); BEST Arabidopsis thaliana protein match is: fatty acid amide hydrolase (TAIR:AT5G64440.1); Has 20819 Blast hits to 20789 proteins in 2485 species: Archae - 270; Bacteria - 10912; Metazoa - 560; Fungi - 1426; Plants - 399; Viruses - 0; Other Eukaryotes - 7252 (source: NCBI BLink). & (reliability: 1160.0) &  (original description: no original description)","protein_coding"
"Kfl00442_0050","kfl00442_0050_v1.1","Klebsormidium nitens","(at5g19820 : 1219.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2438.0) &  (original description: no original description)","protein_coding"
"Kfl00451_0100","kfl00451_0100_v1.1","Klebsormidium nitens","(at5g22640 : 93.2) EMB1211 is a MORN (multiple membrane  occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.; embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"Kfl00469_0060","kfl00469_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00472_0060","kfl00472_0060_v1.1","Klebsormidium nitens","(at3g11070 : 291.0) Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: outer membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT5G05520.1); Has 1600 Blast hits to 1598 proteins in 558 species: Archae - 0; Bacteria - 789; Metazoa - 142; Fungi - 132; Plants - 78; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00479_0080","kfl00479_0080_v1.1","Klebsormidium nitens","(at1g12000 : 703.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (q41141|pfpb_ricco : 697.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (reliability: 1406.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0090","kfl00481_0090_v1.1","Klebsormidium nitens","(at4g02060 : 837.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 242.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1674.0) &  (original description: no original description)","protein_coding"
"Kfl00483_0070","kfl00483_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00501_0070","kfl00501_0070_v1.1","Klebsormidium nitens","(q9xfg3|tbg_phypa : 859.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at3g61650 : 827.0) Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin (TUBG1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, microtubule, plasma membrane, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin  complex protein 2 (TAIR:AT5G05620.1); Has 22646 Blast hits to 22602 proteins in 4766 species: Archae - 19; Bacteria - 43; Metazoa - 4166; Fungi - 13770; Plants - 1412; Viruses - 0; Other Eukaryotes - 3236 (source: NCBI BLink). & (reliability: 1654.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0020","kfl00502_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00523_0070","kfl00523_0070_v1.1","Klebsormidium nitens","(at5g58230 : 676.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00577_0060","kfl00577_0060_v1.1","Klebsormidium nitens","(at3g54670 : 1011.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (reliability: 2022.0) &  (original description: no original description)","protein_coding"
"Kfl00593_0080","kfl00593_0080_v1.1","Klebsormidium nitens","(at1g08540 : 226.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00608_0090","kfl00608_0090_v1.1","Klebsormidium nitens","(at5g61460 : 571.0) Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex.  SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; hypersensitive to MMS, irradiation and MMC (MIM); FUNCTIONS IN: ATP binding; INVOLVED IN: double-strand break repair, sister chromatid cohesion, chromosome segregation, response to X-ray, double-strand break repair via homologous recombination; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 6A (TAIR:AT5G07660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1142.0) &  (original description: no original description)","protein_coding"
"Kfl00609_0010","kfl00609_0010_v1.1","Klebsormidium nitens","(p49310|grp1_sinal : 126.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 124.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript.  Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway.   There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00614_0020","kfl00614_0020_v1.1","Klebsormidium nitens","(at3g13870 : 803.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1606.0) &  (original description: no original description)","protein_coding"
"Kfl00635_0050","kfl00635_0050_v1.1","Klebsormidium nitens","(at1g63680 : 628.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis.  Localized to plastids.  AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"Kfl00638_0060","kfl00638_0060_v1.1","Klebsormidium nitens","(at4g38130 : 681.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7.  Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 667.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 1362.0) &  (original description: no original description)","protein_coding"
"Kfl00639_0030","kfl00639_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00647_0030","kfl00647_0030_v1.1","Klebsormidium nitens","(at2g37210 : 233.0) Encodes a protein of unknown function.  It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.; lysine decarboxylase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: Putative lysine decarboxylase family protein (TAIR:AT3G53450.1). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00647_0040","kfl00647_0040_v1.1","Klebsormidium nitens","(at3g48110 : 1020.0) glycine-tRNA ligase; EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS IN: glycine-tRNA ligase activity; INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal (InterPro:IPR002311), Glycyl-tRNA synthetase, class II, heterodimeric (InterPro:IPR006194), Glycyl-tRNA synthetase, class IIc, beta subunit (InterPro:IPR015944), Glycyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR002310); Has 11308 Blast hits to 11293 proteins in 1754 species: Archae - 4; Bacteria - 6864; Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 4395 (source: NCBI BLink). & (reliability: 2040.0) &  (original description: no original description)","protein_coding"
"Kfl00682_0080","kfl00682_0080_v1.1","Klebsormidium nitens","(at3g08640 : 99.4) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"Kfl00733_0020","kfl00733_0020_v1.1","Klebsormidium nitens","(at2g31650 : 263.0) Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of  phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.; homologue of trithorax (ATX1); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), FY-rich, C-terminal (InterPro:IPR003889), Post-SET domain (InterPro:IPR003616), FY-rich, N-terminal (InterPro:IPR003888), Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Lamin-B receptor of TUDOR domain (InterPro:IPR019023), FY-rich, C-terminal subgroup (InterPro:IPR018516), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), PWWP (InterPro:IPR000313), FY-rich, N-terminal subgroup (InterPro:IPR018518), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: trithorax-like protein 2 (TAIR:AT1G05830.2); Has 7192 Blast hits to 6948 proteins in 474 species: Archae - 2; Bacteria - 393; Metazoa - 3480; Fungi - 840; Plants - 1251; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI BLink). & (q8s4p6|ez1_maize : 92.4) Polycomb protein EZ1 (Enhancer of zeste protein 1) - Zea mays (Maize) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"Kfl00788_0010","kfl00788_0010_v1.1","Klebsormidium nitens","(at5g46280 : 794.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 643.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1588.0) &  (original description: no original description)","protein_coding"
"Kfl00862_0010","kfl00862_0010_v1.1","Klebsormidium nitens","(at1g09430 : 619.0) Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL).  In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes).  The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.; ATP-citrate lyase A-3 (ACLA-3); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 5303 Blast hits to 5302 proteins in 1635 species: Archae - 133; Bacteria - 3235; Metazoa - 230; Fungi - 139; Plants - 96; Viruses - 0; Other Eukaryotes - 1470 (source: NCBI BLink). & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"Kfl01048_0010","kfl01048_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01061_0010","kfl01061_0010_v1.1","Klebsormidium nitens","(p93394|upp_tobac : 298.0) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) - Nicotiana tabacum (Common tobacco) & (at3g53900 : 295.0) Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage.  Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.; uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"Kfl01071_0010","kfl01071_0010_v1.1","Klebsormidium nitens","(at3g46970 : 1044.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (q9lkj3|phsh_wheat : 1042.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Triticum aestivum (Wheat) & (reliability: 2088.0) &  (original description: no original description)","protein_coding"
"Kfl01085_0010","kfl01085_0010_v1.1","Klebsormidium nitens","(at5g48120 : 205.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 594 Blast hits to 356 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 233; Plants - 48; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g01400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g02560","No alias","Oryza sativa","Ser/Thr receptor-like kinase, putative, expressed","protein_coding"
"LOC_Os01g03980","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g04030","No alias","Oryza sativa","signal peptidase complex subunit 3, putative, expressed","protein_coding"
"LOC_Os01g10930","No alias","Oryza sativa","peptide-N4-asparagine amidase A, putative, expressed","protein_coding"
"LOC_Os01g11020","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g16080","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g27750","No alias","Oryza sativa","bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os01g27770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g33230","No alias","Oryza sativa","UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed","protein_coding"
"LOC_Os01g33440","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os01g33990","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os01g36590","No alias","Oryza sativa","nodulin, putative, expressed","protein_coding"
"LOC_Os01g40930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g52500","No alias","Oryza sativa","NADP-dependent malic enzyme, putative, expressed","protein_coding"
"LOC_Os01g56090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g05920","No alias","Oryza sativa","phytosulfokine receptor precursor, putative, expressed","protein_coding"
"LOC_Os02g12170","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g15290","No alias","Oryza sativa","VQ domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g17090","No alias","Oryza sativa","OsSub17 - Putative Subtilisin homologue, expressed","protein_coding"
"LOC_Os02g20934","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g21650","No alias","Oryza sativa","prefoldin, putative, expressed","protein_coding"
"LOC_Os02g40830","No alias","Oryza sativa","succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os02g42780","No alias","Oryza sativa","lectin receptor-type protein kinase, putative, expressed","protein_coding"
"LOC_Os02g49820","No alias","Oryza sativa","RNA recognition motif family protein, expressed","protein_coding"
"LOC_Os02g52350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g08720","No alias","Oryza sativa","transferase family protein, putative, expressed","protein_coding"
"LOC_Os03g13720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g15420","No alias","Oryza sativa","dynamin family protein, putative, expressed","protein_coding"
"LOC_Os03g19070","No alias","Oryza sativa","long cell-linked locus protein, putative, expressed","protein_coding"
"LOC_Os03g21660","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os03g30910","No alias","Oryza sativa","disease resistance protein RPM1, putative, expressed","protein_coding"
"LOC_Os03g48580","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g53690","No alias","Oryza sativa","oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed","protein_coding"
"LOC_Os04g01510","No alias","Oryza sativa","DUF1295 domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g08460","No alias","Oryza sativa","OsFBX115 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os04g11230","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g11790","No alias","Oryza sativa","OsFBX120 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os04g28800","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os04g33230","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os04g34910","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g37430","No alias","Oryza sativa","lipoxygenase protein, putative, expressed","protein_coding"
"LOC_Os04g39489","No alias","Oryza sativa","amino acid transporter, putative, expressed","protein_coding"
"LOC_Os04g42760","No alias","Oryza sativa","sialyltransferase family domain containing protein, expressed","protein_coding"
"LOC_Os04g47160","No alias","Oryza sativa","OsSub44 - Putative Subtilisin homologue, expressed","protein_coding"
"LOC_Os04g49970","No alias","Oryza sativa","U-box, putative, expressed","protein_coding"
"LOC_Os04g53710","No alias","Oryza sativa","plastocyanin-like domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g54420","No alias","Oryza sativa","protein of unknown function, DUF618 domain containing protein, expressed","protein_coding"
"LOC_Os04g57490","No alias","Oryza sativa","cysteine protease, putative, expressed","protein_coding"
"LOC_Os05g02870","No alias","Oryza sativa","white-brown complex homolog protein, putative, expressed","protein_coding"
"LOC_Os05g07830","No alias","Oryza sativa","tRNA methyltransferase complex GCD14 subunit, putative, expressed","protein_coding"
"LOC_Os05g08920","No alias","Oryza sativa","late embryogenesis abundant protein, putative, expressed","protein_coding"
"LOC_Os05g14430","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os05g15670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g18950","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os05g23800","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os05g36950","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g37790","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g38320","No alias","Oryza sativa","avr9/Cf-9 rapidly elicited protein, putative, expressed","protein_coding"
"LOC_Os05g39180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g46380","No alias","Oryza sativa","OsFBX174 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os05g49980","No alias","Oryza sativa","OsFBL26 - F-box domain and LRR containing protein, expressed","protein_coding"
"LOC_Os06g02210","No alias","Oryza sativa","bark storage protein A precursor, putative, expressed","protein_coding"
"LOC_Os06g07100","No alias","Oryza sativa","RING-H2 finger protein, putative, expressed","protein_coding"
"LOC_Os06g15550","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding"
"LOC_Os06g16340","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g18140","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed","protein_coding"
"LOC_Os06g33660","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os07g04060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g06810","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g07930","No alias","Oryza sativa","LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os07g08160","No alias","Oryza sativa","early light-induced protein, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os07g08380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08610","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g12650","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os07g15820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g29820","No alias","Oryza sativa","NBS-LRR disease resistance protein, putative, expressed","protein_coding"
"LOC_Os07g30790","No alias","Oryza sativa","ubiquinol-cytochrome C chaperone family protein, putative, expressed","protein_coding"
"LOC_Os07g31430","No alias","Oryza sativa","phosphate-induced protein 1 conserved region domain containing protein, expressed","protein_coding"
"LOC_Os07g34670","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding"
"LOC_Os07g39330","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os07g41310","No alias","Oryza sativa","COBRA, putative, expressed","protein_coding"
"LOC_Os07g44299","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os07g44730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g47070","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g47280","No alias","Oryza sativa","DNA polymerase zeta catalytic subunit, putative, expressed","protein_coding"
"LOC_Os08g03320","No alias","Oryza sativa","OsFBDUF41 - F-box and DUF domain containing protein, expressed","protein_coding"
"LOC_Os08g32650","No alias","Oryza sativa","cation efflux family protein, putative, expressed","protein_coding"
"LOC_Os08g34500","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g36760","No alias","Oryza sativa","remorin C-terminal domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g38190","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g40830","No alias","Oryza sativa","pumilio domain-containing protein PPD1, putative, expressed","protein_coding"
"LOC_Os08g40850","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os08g41030","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os09g20500","No alias","Oryza sativa","transporter, putative, expressed","protein_coding"
"LOC_Os09g20990","No alias","Oryza sativa","trehalose-6-phosphate synthase, putative, expressed","protein_coding"
"LOC_Os09g24390","No alias","Oryza sativa","zinc knuckle family protein, expressed","protein_coding"
"LOC_Os09g29150","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g36580","No alias","Oryza sativa","thaumatin, putative, expressed","protein_coding"
"LOC_Os09g37976","No alias","Oryza sativa","cupin domain containing protein, expressed","protein_coding"
"LOC_Os10g06720","No alias","Oryza sativa","aldose 1-epimerase, putative, expressed","protein_coding"
"LOC_Os10g08650","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os10g10560","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding"
"LOC_Os10g38440","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os10g40260","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g04180","No alias","Oryza sativa","dual specificity protein phosphatase, putative, expressed","protein_coding"
"LOC_Os11g12610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g14500","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g25890","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os11g37790","No alias","Oryza sativa","mla, putative, expressed","protein_coding"
"LOC_Os11g41890","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os12g09900","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os12g18910","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os12g24550","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g29830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g34874","No alias","Oryza sativa","bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g37830","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os12g40730","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os12g40900","No alias","Oryza sativa","OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed","protein_coding"
"LOC_Os12g41210","No alias","Oryza sativa","tesmin/TSO1-like CXC domain containing protein, expressed","protein_coding"
"LOC_Os12g43300","No alias","Oryza sativa","expressed protein","protein_coding"
"MA_10034634g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10177821g0020","No alias","Picea abies","(at3g58800 : 331.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"MA_102653g0020","No alias","Picea abies","(at4g24220 : 433.0) encodes a novel protein containing mammalian death domain involved in programmed cell death. Gene is expressed in vascular system and mutants carrying dominant mutation in the gene have defective vascular patterning. Gene expression is induced specifically by wounding.; VEIN PATTERNING 1 (VEP1); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: xylem and phloem pattern formation, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G58750.1); Has 711 Blast hits to 707 proteins in 202 species: Archae - 0; Bacteria - 240; Metazoa - 0; Fungi - 168; Plants - 221; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 866.0) &  (original description: no original description)","protein_coding"
"MA_10426430g0010","No alias","Picea abies","(at3g09560 : 212.0) Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"MA_10426467g0010","No alias","Picea abies","(at5g03760 : 471.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"MA_10426748g0010","No alias","Picea abies","(at5g61580 : 218.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"MA_10426786g0010","No alias","Picea abies","(at4g27270 : 325.0) Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: flavodoxin-like quinone reductase 1 (TAIR:AT5G54500.1); Has 3487 Blast hits to 3484 proteins in 1099 species: Archae - 83; Bacteria - 2629; Metazoa - 2; Fungi - 274; Plants - 205; Viruses - 1; Other Eukaryotes - 293 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"MA_10427606g0010","No alias","Picea abies","(p93263|mete_mescr : 828.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) - Mesembryanthemum crystallinum (Common ice pl & (at5g17920 : 823.0) Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to zinc ion, response to salt stress, methionine biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: methionine synthase 2 (TAIR:AT3G03780.3); Has 4442 Blast hits to 4434 proteins in 1682 species: Archae - 183; Bacteria - 3246; Metazoa - 14; Fungi - 206; Plants - 251; Viruses - 2; Other Eukaryotes - 540 (source: NCBI BLink). & (reliability: 1646.0) &  (original description: no original description)","protein_coding"
"MA_10427618g0010","No alias","Picea abies","(at2g26060 : 301.0) embryo defective 1345 (emb1345); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G32990.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"MA_10427685g0010","No alias","Picea abies","(at1g56560 : 435.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 870.0) &  (original description: no original description)","protein_coding"
"MA_10428070g0010","No alias","Picea abies","(q7xlc6|hak11_orysa : 412.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (at1g31120 : 406.0) potassium transporter; K+ uptake permease 10 (KUP10); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 11 (TAIR:AT2G35060.1); Has 3472 Blast hits to 3422 proteins in 1051 species: Archae - 13; Bacteria - 2438; Metazoa - 1; Fungi - 105; Plants - 791; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 812.0) &  (original description: no original description)","protein_coding"
"MA_10429339g0020","No alias","Picea abies","(at5g05170 : 204.0) Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis.  As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, defense response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"MA_10429894g0010","No alias","Picea abies","(at1g52910 : 197.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT3G15480.1); Has 528 Blast hits to 528 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 528; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"MA_10430155g0010","No alias","Picea abies","(at5g61210 : 285.0) membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation; soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 570.0) &  (original description: no original description)","protein_coding"
"MA_10430359g0040","No alias","Picea abies","(at3g57410 : 985.0) Encodes a protein with high homology to animal villin. VLN3 is a Ca2+-regulated villin involved in actin filament bundling.; villin 3 (VLN3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 2 (TAIR:AT2G41740.1); Has 7542 Blast hits to 2948 proteins in 413 species: Archae - 0; Bacteria - 496; Metazoa - 2427; Fungi - 350; Plants - 307; Viruses - 25; Other Eukaryotes - 3937 (source: NCBI BLink). & (reliability: 1970.0) &  (original description: no original description)","protein_coding"
"MA_10430683g0010","No alias","Picea abies","(at3g05290 : 313.0) encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.; peroxisomal adenine nucleotide carrier 1 (PNC1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: peroxisomal adenine nucleotide carrier 2 (TAIR:AT5G27520.1); Has 7303 Blast hits to 6606 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 2896; Fungi - 2326; Plants - 1372; Viruses - 0; Other Eukaryotes - 709 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"MA_10430805g0060","No alias","Picea abies","(at3g05420 : 85.9) Acyl-CoA binding protein with high affinity for   oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"MA_10430906g0010","No alias","Picea abies","(at1g03000 : 795.0) Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis.  May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.; peroxin 6 (PEX6); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 36036 Blast hits to 31766 proteins in 3165 species: Archae - 1626; Bacteria - 13920; Metazoa - 5344; Fungi - 4031; Plants - 3389; Viruses - 33; Other Eukaryotes - 7693 (source: NCBI BLink). & (p54774|cdc48_soybn : 269.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1590.0) &  (original description: no original description)","protein_coding"
"MA_10431205g0010","No alias","Picea abies","(at4g01660 : 301.0) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant; ABC transporter 1 (ABC1); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2); Has 8616 Blast hits to 8614 proteins in 1786 species: Archae - 122; Bacteria - 4355; Metazoa - 377; Fungi - 416; Plants - 667; Viruses - 9; Other Eukaryotes - 2670 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"MA_10431349g0010","No alias","Picea abies","(at2g17890 : 483.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). & (p53681|crk_dauca : 339.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"MA_10431985g0010","No alias","Picea abies","(at1g80950 : 254.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: calcineurin B subunit-related (TAIR:AT2G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"MA_10432099g0010","No alias","Picea abies","(q8w013|comt1_catro : 381.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 367.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay.  AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"MA_10432136g0010","No alias","Picea abies","(p51104|dfra_diaca : 246.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (at5g42800 : 240.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"MA_10432240g0020","No alias","Picea abies","(at4g33700 : 106.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 13295 Blast hits to 13266 proteins in 2597 species: Archae - 106; Bacteria - 10306; Metazoa - 262; Fungi - 156; Plants - 233; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"MA_10433019g0010","No alias","Picea abies","(at5g12960 : 197.0) FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12950.1); Has 1236 Blast hits to 1216 proteins in 340 species: Archae - 6; Bacteria - 1067; Metazoa - 2; Fungi - 28; Plants - 90; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"MA_10433254g0010","No alias","Picea abies","(at4g21120 : 284.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"MA_10433300g0010","No alias","Picea abies","(at2g19170 : 842.0) Encodes a novel subtilisin-like serine protease.; subtilisin-like serine protease 3 (SLP3); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: middle lamella-containing extracellular matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: PA-domain containing subtilase family protein (TAIR:AT4G30020.1); Has 7824 Blast hits to 6803 proteins in 1147 species: Archae - 185; Bacteria - 4676; Metazoa - 73; Fungi - 358; Plants - 1850; Viruses - 0; Other Eukaryotes - 682 (source: NCBI BLink). & (gnl|cdd|68872 : 99.0) no description available & (reliability: 1684.0) &  (original description: no original description)","protein_coding"
"MA_10433308g0010","No alias","Picea abies","(at3g25070 : 110.0) Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved  by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the  plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.; RPM1 interacting protein 4 (RIN4); FUNCTIONS IN: protein binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: defense protein-related (TAIR:AT5G48657.2); Has 373 Blast hits to 371 proteins in 56 species: Archae - 0; Bacteria - 8; Metazoa - 13; Fungi - 2; Plants - 331; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"MA_10434290g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10434917g0010","No alias","Picea abies","(at4g24830 : 305.0) arginosuccinate synthase family; FUNCTIONS IN: argininosuccinate synthase activity, ATP binding; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Argininosuccinate synthase, conserved site (InterPro:IPR018223), Argininosuccinate synthase (InterPro:IPR001518); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"MA_10435166g0010","No alias","Picea abies","(at1g19170 : 577.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1); Has 4384 Blast hits to 4371 proteins in 509 species: Archae - 6; Bacteria - 1552; Metazoa - 14; Fungi - 1224; Plants - 1428; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (p48978|pglr_maldo : 100.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"MA_10435169g0010","No alias","Picea abies","(at2g40090 : 206.0) member of ATH subfamily; ABC2 homolog 9 (ATH9); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65950.1); Has 9031 Blast hits to 8998 proteins in 1777 species: Archae - 124; Bacteria - 4320; Metazoa - 397; Fungi - 498; Plants - 701; Viruses - 9; Other Eukaryotes - 2982 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"MA_10435197g0020","No alias","Picea abies","(at2g14740 : 597.0) Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.; vaculolar sorting receptor 3 (VSR3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor 4 (TAIR:AT2G14720.2); Has 14459 Blast hits to 6347 proteins in 253 species: Archae - 2; Bacteria - 131; Metazoa - 13188; Fungi - 10; Plants - 479; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (p93484|vsr1_pea : 574.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (reliability: 1194.0) &  (original description: no original description)","protein_coding"
"MA_10435581g0010","No alias","Picea abies","(at1g78530 : 352.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 119357 Blast hits to 118005 proteins in 4373 species: Archae - 119; Bacteria - 14010; Metazoa - 43545; Fungi - 10336; Plants - 33459; Viruses - 443; Other Eukaryotes - 17445 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 212.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"MA_10435887g0040","No alias","Picea abies","(q40345|idhp_medsa : 774.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (at1g65930 : 734.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"MA_10435974g0010","No alias","Picea abies","(at3g10370 : 573.0) mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.; SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"MA_10436001g0020","No alias","Picea abies","(p27608|arof_tobac : 465.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 455.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"MA_10436078g0010","No alias","Picea abies","(at2g44970 : 446.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908); Has 178 Blast hits to 178 proteins in 61 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 4; Plants - 92; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 892.0) &  (original description: no original description)","protein_coding"
"MA_10436080g0010","No alias","Picea abies","(at3g06350 : 560.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 1120.0) &  (original description: no original description)","protein_coding"
"MA_10436507g0010","No alias","Picea abies","(at1g35180 : 207.0) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35170.1); Has 191 Blast hits to 191 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 8; Plants - 76; Viruses - 3; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"MA_10436515g0030","No alias","Picea abies","(at2g44480 : 311.0) beta glucosidase 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: stem, hypocotyl, sepal, male gametophyte, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 15 (TAIR:AT2G44450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00326|myro_brana : 224.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"MA_10436915g0010","No alias","Picea abies","(at1g01630 : 241.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G14820.3); Has 3015 Blast hits to 3010 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 666; Plants - 866; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"MA_10437168g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_107600g0010","No alias","Picea abies","(at5g66120 : 153.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"MA_116385g0010","No alias","Picea abies","(at4g34860 : 701.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1402.0) &  (original description: no original description)","protein_coding"
"MA_120662g0010","No alias","Picea abies","(at4g27430 : 284.0) Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.; COP1-interacting protein 7 (CIP7); FUNCTIONS IN: transcription activator activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, anthocyanin biosynthetic process; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR class), putative (TAIR:AT1G61100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"MA_123211g0010","No alias","Picea abies","(at1g18690 : 214.0) Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"MA_128791g0010","No alias","Picea abies","(at1g74320 : 442.0) encodes a choline kinase, whose expression is induced by high salt and mannitol.; Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1486 Blast hits to 1432 proteins in 373 species: Archae - 0; Bacteria - 346; Metazoa - 438; Fungi - 245; Plants - 167; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink). & (reliability: 884.0) &  (original description: no original description)","protein_coding"
"MA_13281g0010","No alias","Picea abies","(at5g53400 : 265.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"MA_1341909g0010","No alias","Picea abies","(at5g03240 : 131.0) encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.; polyubiquitin 3 (UBQ3); INVOLVED IN: protein modification process, response to UV-B, response to light stimulus, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 26684 Blast hits to 7218 proteins in 726 species: Archae - 0; Bacteria - 80; Metazoa - 12490; Fungi - 3021; Plants - 5505; Viruses - 651; Other Eukaryotes - 4937 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"MA_13853g0020","No alias","Picea abies","(at5g48020 : 421.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"MA_13901g0010","No alias","Picea abies","(at3g54250 : 305.0) GHMP kinase family protein; FUNCTIONS IN: diphosphomevalonate decarboxylase activity, kinase activity, ATP binding; INVOLVED IN: isoprenoid biosynthetic process, phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: mevalonate diphosphate decarboxylase 1 (TAIR:AT2G38700.1); Has 1522 Blast hits to 1521 proteins in 681 species: Archae - 55; Bacteria - 885; Metazoa - 122; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"MA_139719g0010","No alias","Picea abies","(at2g01690 : 103.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"MA_14060g0010","No alias","Picea abies","(at1g22650 : 172.0) Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 703 Blast hits to 700 proteins in 102 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"MA_149859g0010","No alias","Picea abies","(p52578|ifrh_soltu : 209.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at4g39230 : 198.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"MA_15508g0010","No alias","Picea abies","(p51119|glna2_vitvi : 607.0) Glutamine synthetase cytosolic isozyme 2 (EC 6.3.1.2) (Glutamate--ammonia ligase) - Vitis vinifera (Grape) & (at5g37600 : 591.0) encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium; glutamine synthase clone R1 (GSR 1); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to light stimulus, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1182.0) &  (original description: no original description)","protein_coding"
"MA_17721g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_17938g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_18127g0010","No alias","Picea abies","(at2g21620 : 202.0) Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment.; RD2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to desiccation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 1098 Blast hits to 1097 proteins in 198 species: Archae - 70; Bacteria - 241; Metazoa - 121; Fungi - 60; Plants - 588; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"MA_183086g0010","No alias","Picea abies","(at5g65020 : 333.0) Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane.  They may be involved in the Golgi-mediated secretion of polysaccharides.; annexin 2 (ANNAT2); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: polysaccharide transport, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cytosol, nucleus, cell surface; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 4555 Blast hits to 2244 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 3503; Fungi - 207; Plants - 559; Viruses - 0; Other Eukaryotes - 286 (source: NCBI BLink). & (p51074|anx4_fraan : 327.0) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"MA_183913g0010","No alias","Picea abies","(at1g08200 : 628.0) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.; UDP-D-apiose/UDP-D-xylose synthase 2 (AXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity; INVOLVED IN: nucleotide-sugar biosynthetic process; LOCATED IN: apoplast, cytoplasm; EXPRESSED IN: fruit, guard cell, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-D-apiose/UDP-D-xylose synthase 1 (TAIR:AT2G27860.1); Has 18414 Blast hits to 18403 proteins in 2616 species: Archae - 518; Bacteria - 11662; Metazoa - 253; Fungi - 80; Plants - 1043; Viruses - 12; Other Eukaryotes - 4846 (source: NCBI BLink). & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"MA_19536g0010","No alias","Picea abies","(at2g42380 : 170.0) Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.; BZIP34; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: male gametophyte, flower, carpel; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT3G58120.1); Has 10078 Blast hits to 4770 proteins in 174 species: Archae - 9; Bacteria - 38; Metazoa - 108; Fungi - 291; Plants - 1254; Viruses - 11; Other Eukaryotes - 8367 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"MA_20205g0020","No alias","Picea abies","(at5g46570 : 734.0) Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710).  Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.; BR-signaling kinase 2 (BSK2); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24585|cri4_maize : 135.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"MA_22713g0010","No alias","Picea abies","(at3g46980 : 484.0) Encodes an inorganic phosphate transporter (PHT4;3).; phosphate transporter 4;3 (PHT4;3); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;2 (TAIR:AT2G38060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 968.0) &  (original description: no original description)","protein_coding"
"MA_23160g0010","No alias","Picea abies","(at5g02230 : 308.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"MA_28209g0010","No alias","Picea abies","(at1g30620 : 651.0) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.; MURUS 4 (MUR4); FUNCTIONS IN: UDP-arabinose 4-epimerase activity, catalytic activity; INVOLVED IN: plant-type cell wall biogenesis, arabinose biosynthetic process, nucleotide-sugar metabolic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G20460.1); Has 42706 Blast hits to 42698 proteins in 2964 species: Archae - 775; Bacteria - 25859; Metazoa - 727; Fungi - 574; Plants - 1159; Viruses - 34; Other Eukaryotes - 13578 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 640.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (reliability: 1302.0) &  (original description: no original description)","protein_coding"
"MA_29364g0010","No alias","Picea abies","(at1g20970 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: proton pump interactor 1 (TAIR:AT4G27500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"MA_318388g0010","No alias","Picea abies","(at1g31120 : 346.0) potassium transporter; K+ uptake permease 10 (KUP10); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 11 (TAIR:AT2G35060.1); Has 3472 Blast hits to 3422 proteins in 1051 species: Archae - 13; Bacteria - 2438; Metazoa - 1; Fungi - 105; Plants - 791; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q7xlc6|hak11_orysa : 337.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"MA_339590g0010","No alias","Picea abies","(at1g11790 : 393.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis.  Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 1 (ADT1); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 2 (TAIR:AT3G07630.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 786.0) &  (original description: no original description)","protein_coding"
"MA_3484g0010","No alias","Picea abies","(at2g23620 : 191.0) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.; methyl esterase 1 (MES1); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: acetone-cyanohydrin lyase (TAIR:AT2G23600.1); Has 1884 Blast hits to 1883 proteins in 431 species: Archae - 2; Bacteria - 1054; Metazoa - 5; Fungi - 43; Plants - 631; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink). & (p52704|hnl_hevbr : 160.0) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) - Hevea brasiliensis (Para rubber tree) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"MA_362678g0010","No alias","Picea abies","(q8h9b6|camt_soltu : 411.0) Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) - Solanum tuberosum (Potato) & (at4g34050 : 403.0) caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"MA_422175g0010","No alias","Picea abies","(q96558|ugdh_soybn : 791.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at3g29360 : 777.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1554.0) &  (original description: no original description)","protein_coding"
"MA_465816g0010","No alias","Picea abies","(at4g29950 : 432.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"MA_47390g0010","No alias","Picea abies","(at1g04200 : 290.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"MA_4950g0010","No alias","Picea abies","(o24361|psb5_spiol : 112.0) Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) - Spinacia oleracea (Spinach) & (at3g26340 : 111.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: proteolysis involved in cellular protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit E1 (TAIR:AT1G13060.1); Has 6541 Blast hits to 6534 proteins in 612 species: Archae - 835; Bacteria - 512; Metazoa - 2083; Fungi - 1372; Plants - 865; Viruses - 0; Other Eukaryotes - 874 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"MA_54284g0010","No alias","Picea abies","(at4g39700 : 209.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"MA_56129g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_6198g0010","No alias","Picea abies","(at1g27680 : 343.0) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q00081|glgl1_soltu : 341.0) Glucose-1-phosphate adenylyltransferase large subunit 1 (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Solanum tuberosum (Potato) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"MA_631179g0010","No alias","Picea abies","(at5g27490 : 330.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G05280.1); Has 530 Blast hits to 529 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 113; Plants - 90; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"MA_65716g0010","No alias","Picea abies","(at1g58030 : 210.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.; cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"MA_67464g0010","No alias","Picea abies","(at1g22040 : 521.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G55270.1); Has 10813 Blast hits to 5578 proteins in 328 species: Archae - 18; Bacteria - 659; Metazoa - 8206; Fungi - 35; Plants - 1449; Viruses - 72; Other Eukaryotes - 374 (source: NCBI BLink). & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"MA_70893g0010","No alias","Picea abies","(at1g67300 : 264.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G79820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) &  (original description: no original description)","protein_coding"
"MA_72352g0010","No alias","Picea abies","(at3g16300 : 113.0) Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G79780.1); Has 429 Blast hits to 429 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"MA_7494g0020","No alias","Picea abies","(at3g55740 : 306.0) Encodes a proline transporter with affinity for gly betaine, proline, and GABA.  Protein is expressed most highly in the roots.; proline transporter 2 (PROT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 1 (TAIR:AT2G39890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"MA_77810g0010","No alias","Picea abies","(at2g27020 : 347.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (o24362|psa3_spiol : 347.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"MA_7924g0020","No alias","Picea abies","(at5g20650 : 126.0) encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast; copper transporter 5 (COPT5); FUNCTIONS IN: copper ion transmembrane transporter activity, high affinity copper ion transmembrane transporter activity; INVOLVED IN: copper ion transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ctr copper transporter (InterPro:IPR007274); BEST Arabidopsis thaliana protein match is: Ctr copper transporter family (TAIR:AT2G26975.1); Has 497 Blast hits to 497 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 69; Plants - 156; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"MA_7933g0010","No alias","Picea abies","(at1g55360 : 580.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"MA_80920g0010","No alias","Picea abies","(at5g26667 : 290.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (p43188|kadc_maize : 104.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"MA_81112g0010","No alias","Picea abies","(q9se94|mthr1_maize : 950.0) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20) (ZmMTHFR1) - Zea mays (Maize) & (at2g44160 : 924.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (reliability: 1848.0) &  (original description: no original description)","protein_coding"
"MA_811551g0010","No alias","Picea abies","(at5g66210 : 172.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"MA_82642g0010","No alias","Picea abies","(at1g32860 : 354.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase_putative (TAIR:AT5G42100.1); Has 2148 Blast hits to 2131 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 2133; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (p52409|e13b_wheat : 240.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 708.0) &  (original description: no original description)","protein_coding"
"MA_8435709g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_85596g0010","No alias","Picea abies","(at4g30780 : 270.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"MA_85917g0010","No alias","Picea abies","(at4g35880 : 338.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G17760.1); Has 2412 Blast hits to 2405 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 331; Fungi - 271; Plants - 1693; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"MA_9153293g0010","No alias","Picea abies","(at5g43940 : 434.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (p80572|adhx_pea : 434.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Pisum sativum (Garden pe & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"MA_917709g0010","No alias","Picea abies","(at3g06350 : 262.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"MA_92200g0020","No alias","Picea abies","(at3g51680 : 242.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 224.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 484.0) &  (original description: no original description)","protein_coding"
"MA_934g0020","No alias","Picea abies","(at3g62830 : 284.0) encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate  several cell wall biosynthetic enzymes.; UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, dTDP-glucose 4,6-dehydratase activity, catalytic activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: plasma membrane, Golgi membrane, membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-xylose synthase 4 (TAIR:AT2G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"MA_93670g0010","No alias","Picea abies","(at2g39970 : 384.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (p29518|bt1_maize : 80.1) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"MA_9368311g0010","No alias","Picea abies","(at2g01650 : 103.0) encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.; plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"MA_9446650g0010","No alias","Picea abies","(at1g15950 : 463.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51104|dfra_diaca : 216.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"MA_94703g0010","No alias","Picea abies","(q96558|ugdh_soybn : 309.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (at5g39320 : 300.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13476 Blast hits to 13452 proteins in 2147 species: Archae - 313; Bacteria - 7039; Metazoa - 213; Fungi - 97; Plants - 213; Viruses - 14; Other Eukaryotes - 5587 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"MA_9582908g0010","No alias","Picea abies","(at1g06050 : 363.0) Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G10750.1); Has 364 Blast hits to 356 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 307; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 726.0) &  (original description: no original description)","protein_coding"
"MA_960698g0010","No alias","Picea abies","(at4g34580 : 240.0) Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.; CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"MA_99538g0010","No alias","Picea abies","(at3g26380 : 309.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Melibiase family protein (TAIR:AT3G56310.1); Has 1323 Blast hits to 1316 proteins in 313 species: Archae - 2; Bacteria - 513; Metazoa - 306; Fungi - 224; Plants - 205; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"Mp1g01470.1","No alias","Marchantia polymorpha","IMB4 nucleocytoplasmic import karyopherin","protein_coding"
"Mp1g02380.1","No alias","Marchantia polymorpha","Regulatory protein NPR3 OS=Arabidopsis thaliana (sp|q8l746|npr3_arath : 302.0)","protein_coding"
"Mp1g04820.1","No alias","Marchantia polymorpha","RNA chaperone (LA). rRNA chaperone (IRP2)","protein_coding"
"Mp1g04910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g07840.1","No alias","Marchantia polymorpha","component ARRS1 of ARPF2-ARRS1 complex","protein_coding"
"Mp1g14620.1","No alias","Marchantia polymorpha","WD repeat-containing protein GTS1 OS=Arabidopsis thaliana (sp|q944s2|gts1_arath : 276.0)","protein_coding"
"Mp1g15040.1","No alias","Marchantia polymorpha","Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana (sp|q9sgn7|ccr12_arath : 261.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 104.9)","protein_coding"
"Mp1g16150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g16550.1","No alias","Marchantia polymorpha","brassinosteroid receptor kinase regulator protein (MSBP)","protein_coding"
"Mp1g18460.1","No alias","Marchantia polymorpha","Probable calcium-binding protein CML17 OS=Arabidopsis thaliana (sp|q9lqn4|cml17_arath : 171.0)","protein_coding"
"Mp1g19390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g23970.1","No alias","Marchantia polymorpha","protein factor PRPF4 of U4/U6 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp1g24770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g25580.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidopsis thaliana (sp|q9fzd1|ppr58_arath : 317.0)","protein_coding"
"Mp2g05050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g06950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16460.1","No alias","Marchantia polymorpha","NUG2 LSU processome regulatory GTPase","protein_coding"
"Mp3g04270.1","No alias","Marchantia polymorpha","protein kinase (NAK)","protein_coding"
"Mp3g05640.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g10710.1","No alias","Marchantia polymorpha","phospholipase D (PLD-alpha). phospholipase D (PLD-epsilon)","protein_coding"
"Mp3g12300.2","No alias","Marchantia polymorpha","alpha-class expansin","protein_coding"
"Mp3g18310.1","No alias","Marchantia polymorpha","pre-60S ribosomal subunit assembly factor (EBP2)","protein_coding"
"Mp3g22620.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g01500.1","No alias","Marchantia polymorpha","component ARPF2 of ARPF2-ARRS1 complex","protein_coding"
"Mp4g06750.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g10980.1","No alias","Marchantia polymorpha","PLANTKAP nucleocytoplasmic transport karyopherin","protein_coding"
"Mp4g13890.1","No alias","Marchantia polymorpha","Putative F-box protein PP2-B12 OS=Arabidopsis thaliana (sp|q9flu7|p2b12_arath : 95.1)","protein_coding"
"Mp4g17130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g19530.1","No alias","Marchantia polymorpha","Pathogen-related protein OS=Hordeum vulgare (sp|p16273|prpx_horvu : 198.0)","protein_coding"
"Mp4g19900.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding"
"Mp4g20270.1","No alias","Marchantia polymorpha","arginine methyltransferase (PRMT5). histone methylase (CAU1)","protein_coding"
"Mp4g22590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g23720.1","No alias","Marchantia polymorpha","inner centromere protein (WYRD)","protein_coding"
"Mp4g23960.1","No alias","Marchantia polymorpha","dihydroorotate dehydrogenase","protein_coding"
"Mp5g00110.1","No alias","Marchantia polymorpha","C3H zinc finger transcription factor","protein_coding"
"Mp5g10240.1","No alias","Marchantia polymorpha","histone deacetylase (HDT/HD2)","protein_coding"
"Mp5g14270.1","No alias","Marchantia polymorpha","component CAP-G of condensin I complex","protein_coding"
"Mp5g23020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g24020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05320.1","No alias","Marchantia polymorpha","component eIF3c of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Mp6g08750.1","No alias","Marchantia polymorpha","component CRN/MAC10 of non-snRNP MOS4-associated complex","protein_coding"
"Mp6g14360.1","No alias","Marchantia polymorpha","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Mp7g01710.1","No alias","Marchantia polymorpha","APUM24 rRNA processing factor involved in ITS2 rRNA removal","protein_coding"
"Mp7g02710.1","No alias","Marchantia polymorpha","ELYS scaffold nucleoporin of nuclear pore complex","protein_coding"
"Mp7g04570.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana (sp|q8vyr5|pp351_arath : 298.0)","protein_coding"
"Mp7g09900.1","No alias","Marchantia polymorpha","pre-40S ribosomal subunit assembly factor (RID3)","protein_coding"
"Mp7g14500.1","No alias","Marchantia polymorpha","microtubule-associated protein (MOR1)","protein_coding"
"Mp7g17710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g04770.1","No alias","Marchantia polymorpha","protein kinase (NAK)","protein_coding"
"Mp8g10290.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana (sp|q9fft9|rh32_arath : 623.0)","protein_coding"
"Mp8g10620.1","No alias","Marchantia polymorpha","kinetochore assembly protein (CENP-C)","protein_coding"
"Mp8g11870.1","No alias","Marchantia polymorpha","transcription factor (MYB)","protein_coding"
"Mp8g14830.1","No alias","Marchantia polymorpha","N-myristoyltransferase","protein_coding"
"Potri.005G043400","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.008G196100","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.010G019000","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.010G020600","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.013G029800","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.013G029900","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.014G135500","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Potri.T107000","No alias","Populus trichocarpa","dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative","protein_coding"
"Pp1s104_212V6","No alias","Physcomitrella patens","transmembrane bax inhibitor motif-containing protein 4","protein_coding"
"Pp1s108_189V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s109_267V6","No alias","Physcomitrella patens","alpha-glucosidase ii","protein_coding"
"Pp1s109_93V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s10_28V6","No alias","Physcomitrella patens","uridylate kinase","protein_coding"
"Pp1s114_48V6","No alias","Physcomitrella patens","sec61 transport protein","protein_coding"
"Pp1s115_153V6","No alias","Physcomitrella patens","acid phosphatase 1","protein_coding"
"Pp1s124_121V6","No alias","Physcomitrella patens","sweetie binding","protein_coding"
"Pp1s125_16V6","No alias","Physcomitrella patens","chloroplast lumenal protein","protein_coding"
"Pp1s12_40V6","No alias","Physcomitrella patens","3-isopropylmalate dehydrogenase","protein_coding"
"Pp1s12_51V6","No alias","Physcomitrella patens","protein phosphatase","protein_coding"
"Pp1s131_72V6","No alias","Physcomitrella patens","serine carboxypeptidase 1 precursor-like protein","protein_coding"
"Pp1s134_54V6","No alias","Physcomitrella patens","at4g20130-like protein","protein_coding"
"Pp1s137_148V6","No alias","Physcomitrella patens","f-box family protein","protein_coding"
"Pp1s138_49V6","No alias","Physcomitrella patens","endoplasmic reticulum metallopeptidase 1","protein_coding"
"Pp1s141_73V6","No alias","Physcomitrella patens","leucine-rich repeat transmembrane protein","protein_coding"
"Pp1s143_112V6","No alias","Physcomitrella patens","galactose oxidase","protein_coding"
"Pp1s145_30V6","No alias","Physcomitrella patens","lung seven transmembrane","protein_coding"
"Pp1s15_298V6","No alias","Physcomitrella patens","coatomer protein gamma-subunit","protein_coding"
"Pp1s160_44V6","No alias","Physcomitrella patens","acetyl- cytosolic 1","protein_coding"
"Pp1s162_9V6","No alias","Physcomitrella patens","cytosolic delta subunit","protein_coding"
"Pp1s164_16V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s16_261V6","No alias","Physcomitrella patens","serine carboxypeptidase ii","protein_coding"
"Pp1s177_34V6","No alias","Physcomitrella patens","gdp-mannose -dehydratase","protein_coding"
"Pp1s17_17V6","No alias","Physcomitrella patens","xyloglucan 6-","protein_coding"
"Pp1s17_371V6","No alias","Physcomitrella patens","F5H14.25; mannitol transporter, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s180_30V6","No alias","Physcomitrella patens","protein phosphatase 2 (formerly 2a) regulatory subunit b gamma","protein_coding"
"Pp1s205_43V6","No alias","Physcomitrella patens","F22F7.4; phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s215_6V6","No alias","Physcomitrella patens","translocon-associated protein alpha subunit precursor","protein_coding"
"Pp1s219_102V6","No alias","Physcomitrella patens","vesicle-associated membrane","protein_coding"
"Pp1s21_361V6","No alias","Physcomitrella patens","T1K7.17; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s222_108V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s223_31V6","No alias","Physcomitrella patens","aspartate aminotransferase","protein_coding"
"Pp1s227_112V6","No alias","Physcomitrella patens","proliferating cell nuclear antigen","protein_coding"
"Pp1s235_40V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s237_14V6","No alias","Physcomitrella patens","gdp-mannose 3 -epimerase","protein_coding"
"Pp1s23_281V6","No alias","Physcomitrella patens","dihydrodipicolinate synthase","protein_coding"
"Pp1s241_103V6","No alias","Physcomitrella patens","T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) [Arabidopsis thaliana]","protein_coding"
"Pp1s241_40V6","No alias","Physcomitrella patens","uridylate kinase","protein_coding"
"Pp1s246_119V6","No alias","Physcomitrella patens","rna binding protein rp120","protein_coding"
"Pp1s263_30V6","No alias","Physcomitrella patens","rna binding","protein_coding"
"Pp1s276_103V6","No alias","Physcomitrella patens","bifunctional fucokinase l-fucose-1-p-guanylyltransferase","protein_coding"
"Pp1s276_2V6","No alias","Physcomitrella patens","receptor of activated protein kinase c component of 40s small ribosomal subunit","protein_coding"
"Pp1s29_54V6","No alias","Physcomitrella patens","chaperonin containingsubunit 7","protein_coding"
"Pp1s317_51V6","No alias","Physcomitrella patens","sorting and assembly machinery","protein_coding"
"Pp1s33_340V6","No alias","Physcomitrella patens","iron -zinc purple acid phosphatase","protein_coding"
"Pp1s35_271V6","No alias","Physcomitrella patens","inhibitor of kappa light polypeptide gene enhancer in b- kinase complex-associated protein","protein_coding"
"Pp1s372_60V6","No alias","Physcomitrella patens","phosphoribosylaminoimidazolecarboxamide formyltransferase imp cyclohydrolase","protein_coding"
"Pp1s392_18V6","No alias","Physcomitrella patens","pyruvate kinase","protein_coding"
"Pp1s414_22V6","No alias","Physcomitrella patens","26s proteasome regulatory subunit s2","protein_coding"
"Pp1s416_17V6","No alias","Physcomitrella patens","beta-ketoacyl-coa synthase family protein","protein_coding"
"Pp1s41_19V6","No alias","Physcomitrella patens","nuclear cap-binding protein","protein_coding"
"Pp1s42_185V6","No alias","Physcomitrella patens","F15H11.2; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s432_7V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s43_170V6","No alias","Physcomitrella patens","T18B16.90; early-responsive to dehydration stress protein (ERD3) [Arabidopsis thaliana]","protein_coding"
"Pp1s43_32V6","No alias","Physcomitrella patens","carbamoyl-phosphate large glutamine-dependent","protein_coding"
"Pp1s44_141V6","No alias","Physcomitrella patens","coatomer delta subunit (delta-coat protein) (delta-cop)","protein_coding"
"Pp1s45_277V6","No alias","Physcomitrella patens","two pore calcium channel","protein_coding"
"Pp1s465_29V6","No alias","Physcomitrella patens","LOC481975; similar to dJ894D12.3 (delta-like 1 (mouse) homolog) [Canis familiaris]","protein_coding"
"Pp1s47_119V6","No alias","Physcomitrella patens","group ii plp","protein_coding"
"Pp1s47_18V6","No alias","Physcomitrella patens","dehydroquinate dehydratase shikimate dehydrogenase","protein_coding"
"Pp1s4_346V6","No alias","Physcomitrella patens","exocyst componenet","protein_coding"
"Pp1s519_8V6","No alias","Physcomitrella patens","F3C22.10; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s53_101V6","No alias","Physcomitrella patens","T12P18.17; nucleolar RNA-associated family protein / Nrap family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s59_4V6","No alias","Physcomitrella patens","T14P1.19; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s64_23V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s6_208V6","No alias","Physcomitrella patens","F25E4.40; eukaryotic translation initiation factor 3 subunit 10 / eIF-3 theta / eIF3a (TIF3A1) [KO:K03254] [Arabidopsis thaliana]","protein_coding"
"Pp1s73_48V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s77_89V6","No alias","Physcomitrella patens","F16M14.21; AMP deaminase, putative / myoadenylate deaminase, putative [EC:3.5.4.6] [KO:K01490] [Arabidopsis thaliana]","protein_coding"
"Pp1s79_171V6","No alias","Physcomitrella patens","26s protease regulatory subunit 6b","protein_coding"
"Pp1s7_175V6","No alias","Physcomitrella patens","bifunctional aminoacyl-trna synthetase","protein_coding"
"Pp1s7_322V6","No alias","Physcomitrella patens","atpase type 13a1","protein_coding"
"Pp1s81_54V6","No alias","Physcomitrella patens","mitochondrial processing peptidase","protein_coding"
"Pp1s84_125V6","No alias","Physcomitrella patens","valyl trna synthetase","protein_coding"
"Pp1s8_66V6","No alias","Physcomitrella patens","gdp-mannose pyrophosphorylase","protein_coding"
"Pp1s94_157V6","No alias","Physcomitrella patens","F7D19.23; peroxisomal membrane 22 kDa family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s99_139V6","No alias","Physcomitrella patens","transitional endoplasmic reticulum","protein_coding"
"Pp1s9_356V6","No alias","Physcomitrella patens","aspartate aminotransferase","protein_coding"
"Pp1s9_66V6","No alias","Physcomitrella patens","solute carrier family 40 (iron-regulated transporter) member 1","protein_coding"
"PSME_00000125-RA","No alias","Pseudotsuga menziesii","(at4g12420 : 684.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5  similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 436.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (reliability: 1290.0) &  (original description: no original description)","protein_coding"
"PSME_00000131-RA","No alias","Pseudotsuga menziesii","(at5g50920 : 1361.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 1356.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 2722.0) &  (original description: no original description)","protein_coding"
"PSME_00000209-RA","No alias","Pseudotsuga menziesii","(at3g06650 : 1084.0) One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase; ATP-citrate lyase B-1 (ACLB-1); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: citrate lyase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP citrate lyase subunit B 2 (TAIR:AT5G49460.1); Has 8069 Blast hits to 8065 proteins in 2074 species: Archae - 271; Bacteria - 4029; Metazoa - 557; Fungi - 289; Plants - 162; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink). & (q6zl94|suca_orysa : 114.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (reliability: 2168.0) &  (original description: no original description)","protein_coding"
"PSME_00000256-RA","No alias","Pseudotsuga menziesii","(at2g40460 : 710.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 7555 Blast hits to 7238 proteins in 1401 species: Archae - 0; Bacteria - 3710; Metazoa - 634; Fungi - 431; Plants - 2228; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink). & (reliability: 1420.0) &  (original description: no original description)","protein_coding"
"PSME_00000526-RA","No alias","Pseudotsuga menziesii","(at3g02645 : 114.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00000629-RA","No alias","Pseudotsuga menziesii","(at1g48850 : 457.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"PSME_00001608-RA","No alias","Pseudotsuga menziesii","(at5g04620 : 255.0) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.; biotin F (BIOF); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"PSME_00002051-RA","No alias","Pseudotsuga menziesii","(at5g45775 : 331.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (p46287|rl11_medsa : 330.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00002055-RA","No alias","Pseudotsuga menziesii","(at5g50850 : 587.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (p52904|odpb_pea : 578.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"PSME_00003120-RA","No alias","Pseudotsuga menziesii","(at1g32900 : 654.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (q43092|ssg1_pea : 653.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Pisum sativum (Garden pea) & (reliability: 1308.0) &  (original description: no original description)","protein_coding"
"PSME_00003121-RA","No alias","Pseudotsuga menziesii","(at1g32900 : 675.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (q43092|ssg1_pea : 665.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Pisum sativum (Garden pea) & (reliability: 1350.0) &  (original description: no original description)","protein_coding"
"PSME_00003231-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 244.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 237.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00003232-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 379.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 378.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00003425-RA","No alias","Pseudotsuga menziesii","(q07353|fl3h_pethy : 508.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (at3g51240 : 494.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00003915-RA","No alias","Pseudotsuga menziesii","(p80030|fabi_brana : 499.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 493.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex.  A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (reliability: 986.0) &  (original description: no original description)","protein_coding"
"PSME_00004180-RA","No alias","Pseudotsuga menziesii","(q06364|psmd3_dauca : 558.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Daucus carota (Carrot) & (at1g20200 : 546.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 1092.0) &  (original description: no original description)","protein_coding"
"PSME_00004319-RA","No alias","Pseudotsuga menziesii","(at1g72550 : 854.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1708.0) &  (original description: no original description)","protein_coding"
"PSME_00004546-RA","No alias","Pseudotsuga menziesii","(at1g75290 : 279.0) encodes a protein whose sequence is similar to an isoflavone reductase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink). & (p52579|ifrh_tobac : 278.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00004917-RA","No alias","Pseudotsuga menziesii","(at1g55320 : 559.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (reliability: 1118.0) &  (original description: no original description)","protein_coding"
"PSME_00004950-RA","No alias","Pseudotsuga menziesii","(at5g03300 : 545.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (o49923|adk_phypa : 499.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00005274-RA","No alias","Pseudotsuga menziesii","(at4g10610 : 306.0) RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).; RNA-BINDING PROTEIN 37 (RBP37); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 11 (TAIR:AT1G32790.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00005636-RA","No alias","Pseudotsuga menziesii","(q41141|pfpb_ricco : 832.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (at1g12000 : 811.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (reliability: 1622.0) &  (original description: no original description)","protein_coding"
"PSME_00005832-RA","No alias","Pseudotsuga menziesii","(p51615|maox_vitvi : 925.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Vitis vinifera (Grape) & (at1g79750 : 920.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.; NADP-malic enzyme 4 (NADP-ME4); CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 9573 Blast hits to 9553 proteins in 2441 species: Archae - 143; Bacteria - 6332; Metazoa - 610; Fungi - 220; Plants - 473; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (reliability: 1840.0) &  (original description: no original description)","protein_coding"
"PSME_00006186-RA","No alias","Pseudotsuga menziesii","(p83372|cisy_fraan : 231.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Fragaria ananassa (Strawberry) & (at2g44350 : 228.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"PSME_00006653-RA","No alias","Pseudotsuga menziesii","(at2g33150 : 503.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase  4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"PSME_00007509-RA","No alias","Pseudotsuga menziesii","(at1g58280 : 168.0) Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT5G64460.8). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00007695-RA","No alias","Pseudotsuga menziesii","(p21357|arof_soltu : 773.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Solanum tuberosum (Potato) & (at4g33510 : 745.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (reliability: 1490.0) &  (original description: no original description)","protein_coding"
"PSME_00008680-RA","No alias","Pseudotsuga menziesii","(at4g09460 : 211.0) Encodes myb6 DNA-binding protein.; myb domain protein 6 (MYB6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: high response to osmotic stress 10 (TAIR:AT1G35515.1); Has 9066 Blast hits to 8378 proteins in 471 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 460; Plants - 6053; Viruses - 3; Other Eukaryotes - 1770 (source: NCBI BLink). & (p20026|myb1_horvu : 207.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00008789-RA","No alias","Pseudotsuga menziesii","(at3g52990 : 773.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (p22200|kpyc_soltu : 345.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Solanum tuberosum (Potato) & (reliability: 1546.0) &  (original description: no original description)","protein_coding"
"PSME_00008843-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 224.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00008844-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 114.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00009560-RA","No alias","Pseudotsuga menziesii","(at1g66430 : 453.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT5G51830.1); Has 20370 Blast hits to 20366 proteins in 2496 species: Archae - 409; Bacteria - 15079; Metazoa - 242; Fungi - 159; Plants - 598; Viruses - 0; Other Eukaryotes - 3883 (source: NCBI BLink). & (q944f5|scrk2_orysa : 379.0) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII) - Oryza sativa (Rice) & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"PSME_00009635-RA","No alias","Pseudotsuga menziesii","(at2g30860 : 205.0) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase PHI 9 (GSTF9); FUNCTIONS IN: glutathione transferase activity, glutathione peroxidase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to zinc ion, defense response to bacterium, toxin catabolic process, defense response; LOCATED IN: thylakoid, apoplast, chloroplast, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 10 (TAIR:AT2G30870.1); Has 9998 Blast hits to 9981 proteins in 1215 species: Archae - 0; Bacteria - 5032; Metazoa - 1549; Fungi - 611; Plants - 924; Viruses - 0; Other Eukaryotes - 1882 (source: NCBI BLink). & (p04907|gstf3_maize : 189.0) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST class-phi) - Zea mays (Maize) & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"PSME_00009653-RA","No alias","Pseudotsuga menziesii","(at1g36160 : 1861.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (q2qmg2|mcca_orysa : 140.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 3722.0) &  (original description: no original description)","protein_coding"
"PSME_00009945-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 422.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 415.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00010024-RA","No alias","Pseudotsuga menziesii","(at1g52920 : 207.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with  the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00010234-RA","No alias","Pseudotsuga menziesii","(o80433|cisy_dauca : 439.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at2g44350 : 429.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00010733-RA","No alias","Pseudotsuga menziesii","(p48522|tcmo_catro : 734.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g30490 : 720.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (reliability: 1440.0) &  (original description: no original description)","protein_coding"
"PSME_00011516-RA","No alias","Pseudotsuga menziesii","(at5g22020 : 536.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase-like 3 (TAIR:AT1G08470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p18417|stsy_catro : 168.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 1072.0) &  (original description: no original description)","protein_coding"
"PSME_00012474-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 241.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 227.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"PSME_00012476-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 361.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 346.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"PSME_00012477-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 438.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 419.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"PSME_00012769-RA","No alias","Pseudotsuga menziesii","(at5g16990 : 367.0) molecular function has not been defined, was shown involved in oxidative stress tolerance.; Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"PSME_00013602-RA","No alias","Pseudotsuga menziesii","(at5g05270 : 221.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: intramolecular lyase activity, chalcone isomerase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 361 Blast hits to 360 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00013760-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 759.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 640.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00013763-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 763.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 644.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"PSME_00013764-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 762.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 645.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1290.0) &  (original description: no original description)","protein_coding"
"PSME_00014005-RA","No alias","Pseudotsuga menziesii","(at1g76940 : 138.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleotide binding;nucleic acid binding (TAIR:AT1G21320.1). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"PSME_00014395-RA","No alias","Pseudotsuga menziesii","(q7xpy2|pma1_orysa : 842.0) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) - Oryza sativa (Rice) & (at3g42640 : 837.0) H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink). & (reliability: 1674.0) &  (original description: no original description)","protein_coding"
"PSME_00015545-RA","No alias","Pseudotsuga menziesii","(at4g02930 : 659.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (p56292|eftu_chlvu : 490.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 1318.0) &  (original description: no original description)","protein_coding"
"PSME_00015776-RA","No alias","Pseudotsuga menziesii",""(at2g45570 : 395.0) member of CYP76C; ""cytochrome P450, family 76, subfamily C, polypeptide 2"" (CYP76C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 34313 Blast hits to 34043 proteins in 1718 species: Archae - 48; Bacteria - 4021; Metazoa - 12101; Fungi - 7308; Plants - 9587; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (p48418|c75a1_pethy : 379.0) Flavonoid 3',5'-hydroxylase 1 (EC 1.14.13.88) (F3'5'H) (Cytochrome P450 75A1) (CYPLXXVA1) - Petunia hybrida (Petunia) & (reliability: 788.0) &  (original description: no original description)"","protein_coding"
"PSME_00015945-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 523.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 345.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1046.0) &  (original description: no original description)","protein_coding"
"PSME_00016009-RA","No alias","Pseudotsuga menziesii","(at4g35630 : 126.0) Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway.; phosphoserine aminotransferase (PSAT); FUNCTIONS IN: O-phospho-L-serine:2-oxoglutarate aminotransferase activity; INVOLVED IN: L-serine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Phosphoserine aminotransferase, subgroup (InterPro:IPR003248), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Phosphoserine aminotransferase (InterPro:IPR022278); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT2G17630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52877|serc_spiol : 122.0) Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) - Spinacia oleracea (Spinach) & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"PSME_00016123-RA","No alias","Pseudotsuga menziesii","(at5g56660 : 317.0) encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested.; IAA-leucine resistant (ILR)-like 2 (ILL2); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity, IAA-Ala conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 1 (TAIR:AT5G56650.1); Has 12923 Blast hits to 12915 proteins in 1981 species: Archae - 133; Bacteria - 9506; Metazoa - 56; Fungi - 252; Plants - 310; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00016801-RA","No alias","Pseudotsuga menziesii","(at5g19760 : 471.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00016911-RA","No alias","Pseudotsuga menziesii","(q40345|idhp_medsa : 770.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (at1g65930 : 739.0) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (reliability: 1478.0) &  (original description: no original description)","protein_coding"
"PSME_00017125-RA","No alias","Pseudotsuga menziesii","(p11043|aroa_pethy : 487.0) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) - Petunia hybrida (Petunia) & (at2g45300 : 478.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (reliability: 956.0) &  (original description: no original description)","protein_coding"
"PSME_00017224-RA","No alias","Pseudotsuga menziesii","(at3g24090 : 853.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (reliability: 1706.0) &  (original description: no original description)","protein_coding"
"PSME_00017269-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 508.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 499.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"PSME_00017606-RA","No alias","Pseudotsuga menziesii","(at4g31750 : 215.0) Encodes HopW1-1-Interacting protein 2 (WIN2).  Interacts with the P. syringae effector HopW1-1.  WIN2 has protein phosphatase activity.  Modulates plant defenses against bacteria.  Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 2 (WIN2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, defense response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G24940.1); Has 8917 Blast hits to 8860 proteins in 1196 species: Archae - 18; Bacteria - 2164; Metazoa - 1691; Fungi - 821; Plants - 2764; Viruses - 9; Other Eukaryotes - 1450 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"PSME_00017718-RA","No alias","Pseudotsuga menziesii","(at3g56620 : 199.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 3973 Blast hits to 3961 proteins in 822 species: Archae - 18; Bacteria - 2149; Metazoa - 8; Fungi - 0; Plants - 1241; Viruses - 0; Other Eukaryotes - 557 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00017936-RA","No alias","Pseudotsuga menziesii","(at3g13930 : 583.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, copper ion binding; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 21425 Blast hits to 19790 proteins in 2331 species: Archae - 106; Bacteria - 12026; Metazoa - 730; Fungi - 474; Plants - 369; Viruses - 0; Other Eukaryotes - 7720 (source: NCBI BLink). & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"PSME_00019358-RA","No alias","Pseudotsuga menziesii","(at1g13280 : 211.0) Encodes allene oxide cyclase.  One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway.; allene oxide cyclase 4 (AOC4); FUNCTIONS IN: allene-oxide cyclase activity; INVOLVED IN: jasmonic acid biosynthetic process; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Allene oxide cyclase (InterPro:IPR009410); BEST Arabidopsis thaliana protein match is: allene oxide cyclase 3 (TAIR:AT3G25780.1); Has 204 Blast hits to 204 proteins in 33 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"PSME_00019437-RA","No alias","Pseudotsuga menziesii","(at3g52990 : 811.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, magnesium ion binding, potassium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: membrane; EXPRESSED IN: guard cell, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT2G36580.1); Has 9560 Blast hits to 9533 proteins in 2700 species: Archae - 164; Bacteria - 5966; Metazoa - 522; Fungi - 215; Plants - 538; Viruses - 0; Other Eukaryotes - 2155 (source: NCBI BLink). & (p22200|kpyc_soltu : 360.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Solanum tuberosum (Potato) & (reliability: 1622.0) &  (original description: no original description)","protein_coding"
"PSME_00019509-RA","No alias","Pseudotsuga menziesii","(at3g46980 : 451.0) Encodes an inorganic phosphate transporter (PHT4;3).; phosphate transporter 4;3 (PHT4;3); FUNCTIONS IN: organic anion transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;2 (TAIR:AT2G38060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00019515-RA","No alias","Pseudotsuga menziesii","(at2g24210 : 147.0) terpene synthase 10 (TPS10); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25820.1); Has 1742 Blast hits to 1707 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1738; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (p93665|dcs1_goshi : 127.0) (+)-delta-cadinene synthase (EC 4.2.3.13) (D-cadinene synthase) - Gossypium hirsutum (Upland cotton) & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00019910-RA","No alias","Pseudotsuga menziesii","(at3g12270 : 511.0) protein arginine methyltransferase 3 (PRMT3); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, zinc ion binding; INVOLVED IN: protein amino acid methylation; LOCATED IN: intracellular, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3110 Blast hits to 3077 proteins in 726 species: Archae - 48; Bacteria - 800; Metazoa - 1243; Fungi - 266; Plants - 328; Viruses - 0; Other Eukaryotes - 425 (source: NCBI BLink). & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"PSME_00020035-RA","No alias","Pseudotsuga menziesii","(p50156|tip11_orysa : 154.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (at3g26520 : 152.0) gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.; tonoplast intrinsic protein 2 (TIP2); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport, defense response to bacterium, hydrogen peroxide transmembrane transport, water homeostasis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10870 Blast hits to 10853 proteins in 2179 species: Archae - 81; Bacteria - 5139; Metazoa - 1484; Fungi - 429; Plants - 2489; Viruses - 0; Other Eukaryotes - 1248 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00020498-RA","No alias","Pseudotsuga menziesii","(p27608|arof_tobac : 769.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at1g22410 : 746.0) Class-II DAHP synthetase family protein; FUNCTIONS IN: 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 (TAIR:AT4G39980.1); Has 3811 Blast hits to 3796 proteins in 685 species: Archae - 0; Bacteria - 1237; Metazoa - 0; Fungi - 110; Plants - 171; Viruses - 0; Other Eukaryotes - 2293 (source: NCBI BLink). & (reliability: 1492.0) &  (original description: no original description)","protein_coding"
"PSME_00020743-RA","No alias","Pseudotsuga menziesii","(p11043|aroa_pethy : 585.0) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) - Petunia hybrida (Petunia) & (at2g45300 : 574.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (reliability: 1148.0) &  (original description: no original description)","protein_coding"
"PSME_00021018-RA","No alias","Pseudotsuga menziesii","(at4g00820 : 115.0) IQ-domain 17 (iqd17); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 18 (TAIR:AT1G01110.2); Has 1332 Blast hits to 1131 proteins in 120 species: Archae - 0; Bacteria - 14; Metazoa - 172; Fungi - 58; Plants - 857; Viruses - 43; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00021033-RA","No alias","Pseudotsuga menziesii","(at1g79650 : 386.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (q40742|rad23_orysa : 369.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"PSME_00021228-RA","No alias","Pseudotsuga menziesii","(at1g61720 : 224.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (p51110|dfra_vitvi : 204.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00021615-RA","No alias","Pseudotsuga menziesii","(at5g14760 : 489.0) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction  L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2; L-aspartate oxidase (AO); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, L-aspartate oxidase activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112), L-aspartate oxidase (InterPro:IPR005288); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-1 (TAIR:AT5G66760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 159.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"PSME_00021859-RA","No alias","Pseudotsuga menziesii","(at1g60780 : 375.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"PSME_00022126-RA","No alias","Pseudotsuga menziesii","(at4g15093 : 346.0) catalytic LigB subunit of aromatic ring-opening dioxygenase family; FUNCTIONS IN: oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Extradiol aromatic ring-opening dioxygenase, DODA type (InterPro:IPR014436), Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (InterPro:IPR004183); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"PSME_00022177-RA","No alias","Pseudotsuga menziesii","(o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco) & (at1g65060 : 693.0) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica.  mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and  bolting stems of mature plants.  The catalytic efficiency was in the following (descending) order:  p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.; 4-coumarate:CoA ligase 3 (4CL3); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 78268 Blast hits to 71395 proteins in 3651 species: Archae - 1111; Bacteria - 51774; Metazoa - 3299; Fungi - 4373; Plants - 2538; Viruses - 1; Other Eukaryotes - 15172 (source: NCBI BLink). & (reliability: 1386.0) &  (original description: no original description)","protein_coding"
"PSME_00022272-RA","No alias","Pseudotsuga menziesii","(at5g46290 : 738.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 728.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1476.0) &  (original description: no original description)","protein_coding"
"PSME_00023382-RA","No alias","Pseudotsuga menziesii","(at5g65280 : 430.0) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.; GCR2-like 1 (GCL1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 792.0) &  (original description: no original description)","protein_coding"
"PSME_00024109-RA","No alias","Pseudotsuga menziesii","(at4g28390 : 544.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (p25083|adt1_soltu : 542.0) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Solanum tuberosum (Potato) & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"PSME_00024205-RA","No alias","Pseudotsuga menziesii","(p55233|glgl1_betvu : 702.0) Glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) - Beta vulgaris (Sugar beet) & (at1g27680 : 686.0) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.; ADPGLC-PPase large subunit (APL2); CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 11860 Blast hits to 11712 proteins in 2161 species: Archae - 516; Bacteria - 8154; Metazoa - 62; Fungi - 36; Plants - 1704; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"PSME_00025180-RA","No alias","Pseudotsuga menziesii","(at4g38510 : 715.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 710.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"PSME_00025575-RA","No alias","Pseudotsuga menziesii","(p51092|ldox_pethy : 338.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) - Petunia hybrida (Petunia) & (at4g22880 : 317.0) encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.; leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00025820-RA","No alias","Pseudotsuga menziesii","(at4g39350 : 1634.0) Encodes a cellulose synthase isomer, related to CESA6.  As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.; cellulose synthase A2 (CESA2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A9 (TAIR:AT2G21770.1); Has 3166 Blast hits to 2799 proteins in 618 species: Archae - 10; Bacteria - 1096; Metazoa - 3; Fungi - 18; Plants - 1940; Viruses - 5; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 3268.0) &  (original description: no original description)","protein_coding"
"PSME_00026039-RA","No alias","Pseudotsuga menziesii","(at1g10670 : 695.0) One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase.  Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.; ATP-citrate lyase A-1 (ACLA-1); CONTAINS InterPro DOMAIN/s: ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-2 (TAIR:AT1G60810.1). & (reliability: 1390.0) &  (original description: no original description)","protein_coding"
"PSME_00026667-RA","No alias","Pseudotsuga menziesii","(at1g60160 : 540.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q69ri8|hak14_orysa : 464.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"PSME_00026992-RA","No alias","Pseudotsuga menziesii","(at5g20190 : 84.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G80130.1); Has 458 Blast hits to 304 proteins in 39 species: Archae - 0; Bacteria - 85; Metazoa - 7; Fungi - 10; Plants - 317; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"PSME_00027090-RA","No alias","Pseudotsuga menziesii","(at4g26910 : 226.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT5G55070.1); Has 24826 Blast hits to 20752 proteins in 2368 species: Archae - 154; Bacteria - 14691; Metazoa - 760; Fungi - 487; Plants - 406; Viruses - 4; Other Eukaryotes - 8324 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00027487-RA","No alias","Pseudotsuga menziesii","(at3g20920 : 387.0) translocation protein-related; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocation protein Sec62 (InterPro:IPR004728); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00028700-RA","No alias","Pseudotsuga menziesii","(at4g24380 : 226.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00029051-RA","No alias","Pseudotsuga menziesii","(at2g26800 : 287.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"PSME_00029052-RA","No alias","Pseudotsuga menziesii","(at2g26800 : 187.0) Aldolase superfamily protein; FUNCTIONS IN: hydroxymethylglutaryl-CoA lyase activity, catalytic activity; INVOLVED IN: leucine metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Pyruvate carboxyltransferase (InterPro:IPR000891); Has 2834 Blast hits to 2828 proteins in 876 species: Archae - 8; Bacteria - 1833; Metazoa - 220; Fungi - 120; Plants - 70; Viruses - 0; Other Eukaryotes - 583 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00029510-RA","No alias","Pseudotsuga menziesii","(at1g22540 : 522.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (reliability: 1044.0) &  (original description: no original description)","protein_coding"
"PSME_00029904-RA","No alias","Pseudotsuga menziesii","(at2g22250 : 390.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"PSME_00029905-RA","No alias","Pseudotsuga menziesii","(at2g22250 : 181.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00030002-RA","No alias","Pseudotsuga menziesii","(p27608|arof_tobac : 816.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Nicotiana tabacum (Common tob & (at4g33510 : 808.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"PSME_00030732-RA","No alias","Pseudotsuga menziesii","(at5g39740 : 409.0) Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.; ribosomal protein L5 B (RPL5B); FUNCTIONS IN: structural constituent of ribosome, 5S rRNA binding; INVOLVED IN: cell proliferation, translation, ribosome biogenesis, leaf morphogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 (TAIR:AT3G25520.1). & (q6unt2|rl5_cucsa : 409.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00030760-RA","No alias","Pseudotsuga menziesii","(at5g65400 : 183.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"PSME_00031000-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 777.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 644.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"PSME_00031234-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 360.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00031690-RA","No alias","Pseudotsuga menziesii","(at1g73230 : 171.0) Nascent polypeptide-associated complex NAC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: basic transcription factor 3 (TAIR:AT1G17880.1); Has 832 Blast hits to 832 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 423; Fungi - 174; Plants - 145; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00031787-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 572.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 1144.0) &  (original description: no original description)","protein_coding"
"PSME_00031826-RA","No alias","Pseudotsuga menziesii","(at1g47530 : 563.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, ripening, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: root hair specific 2 (TAIR:AT1G12950.1); Has 9964 Blast hits to 9893 proteins in 2013 species: Archae - 182; Bacteria - 7111; Metazoa - 140; Fungi - 326; Plants - 1355; Viruses - 0; Other Eukaryotes - 850 (source: NCBI BLink). & (reliability: 1126.0) &  (original description: no original description)","protein_coding"
"PSME_00032765-RA","No alias","Pseudotsuga menziesii","(at2g37110 : 233.0) PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT2G40935.1); Has 380 Blast hits to 379 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 19; Plants - 350; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00032967-RA","No alias","Pseudotsuga menziesii","(at1g75280 : 258.0) isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink). & (p52579|ifrh_tobac : 253.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00033245-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 328.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 305.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"PSME_00033708-RA","No alias","Pseudotsuga menziesii","(at5g46050 : 234.0) Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.; peptide transporter 3 (PTR3); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: in 12 processes; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G46040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"PSME_00034169-RA","No alias","Pseudotsuga menziesii","(at2g21940 : 244.0) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00034982-RA","No alias","Pseudotsuga menziesii","(at2g30740 : 343.0) Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G06700.2); Has 113668 Blast hits to 112534 proteins in 4506 species: Archae - 103; Bacteria - 13481; Metazoa - 42069; Fungi - 9253; Plants - 32237; Viruses - 339; Other Eukaryotes - 16186 (source: NCBI BLink). & (o24585|cri4_maize : 146.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"PSME_00035043-RA","No alias","Pseudotsuga menziesii","(at5g10160 : 282.0) Thioesterase superfamily protein; FUNCTIONS IN: hydro-lyase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: cell wall, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ (InterPro:IPR013114), Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (InterPro:IPR010084); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT2G22230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00035333-RA","No alias","Pseudotsuga menziesii","(at5g17770 : 387.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p16081|nia1_orysa : 171.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00035539-RA","No alias","Pseudotsuga menziesii","(at1g26820 : 266.0) Encodes ribonuclease RNS3.; ribonuclease 3 (RNS3); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2544 Blast hits to 2543 proteins in 498 species: Archae - 0; Bacteria - 415; Metazoa - 284; Fungi - 227; Plants - 1506; Viruses - 7; Other Eukaryotes - 105 (source: NCBI BLink). & (p83618|rn28_pangi : 110.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"PSME_00035922-RA","No alias","Pseudotsuga menziesii","(at1g30825 : 405.0) Involved in trichome maturation. mutant displays enlarged trichomes; DISTORTED TRICHOMES 2 (DIS2); CONTAINS InterPro DOMAIN/s: Arp2/3 complex, 34kDa subunit p34-Arc (InterPro:IPR007188); BEST Arabidopsis thaliana protein match is: actin-related protein C2B (TAIR:AT2G33385.2); Has 407 Blast hits to 407 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 133; Plants - 82; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00036161-RA","No alias","Pseudotsuga menziesii","(at2g28100 : 592.0) Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides.  was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 590.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 1184.0) &  (original description: no original description)","protein_coding"
"PSME_00036176-RA","No alias","Pseudotsuga menziesii","(at1g02270 : 376.0) Calcium-binding endonuclease/exonuclease/phosphatase family; FUNCTIONS IN: catalytic activity, calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Calcium-binding endonuclease/exonuclease/phosphatase family (TAIR:AT5G54130.2); Has 514 Blast hits to 514 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 59; Plants - 214; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"PSME_00036591-RA","No alias","Pseudotsuga menziesii","(at1g22170 : 431.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"PSME_00037003-RA","No alias","Pseudotsuga menziesii","(p51092|ldox_pethy : 374.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) - Petunia hybrida (Petunia) & (at4g22880 : 358.0) encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.; leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"PSME_00037004-RA","No alias","Pseudotsuga menziesii","(p51092|ldox_pethy : 444.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) - Petunia hybrida (Petunia) & (at4g22880 : 438.0) encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.; leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"PSME_00037338-RA","No alias","Pseudotsuga menziesii","(at5g41040 : 291.0) Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.; HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2973 Blast hits to 2952 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2730; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (o24645|hcbt1_diaca : 201.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00037696-RA","No alias","Pseudotsuga menziesii","(at3g52200 : 85.1) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00037697-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00038080-RA","No alias","Pseudotsuga menziesii","(q42857|ssg1_ipoba : 308.0) Granule-bound starch synthase 1, chloroplast precursor (EC 2.4.1.242) (Granule-bound starch synthase I) (GBSS-I) - Ipomoea batatas (Sweet potato) (Batate) & (at1g32900 : 300.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: protein binding, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, glucan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 13950 Blast hits to 13932 proteins in 3602 species: Archae - 351; Bacteria - 6813; Metazoa - 7; Fungi - 173; Plants - 5477; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00038417-RA","No alias","Pseudotsuga menziesii","(q9ayp4|rs10_orysa : 148.0) 40S ribosomal protein S10 - Oryza sativa (Rice) & (at5g52650 : 146.0) RNA binding Plectin/S10 domain-containing protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal (InterPro:IPR005326); BEST Arabidopsis thaliana protein match is: RNA binding Plectin/S10 domain-containing protein (TAIR:AT4G25740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00038947-RA","No alias","Pseudotsuga menziesii","(p51117|cfi_vitvi : 256.0) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone isomerase) - Vitis vinifera (Grape) & (at3g55120 : 235.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00039262-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 652.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 556.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"PSME_00039810-RA","No alias","Pseudotsuga menziesii","(at1g14020 : 608.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1216.0) &  (original description: no original description)","protein_coding"
"PSME_00040075-RA","No alias","Pseudotsuga menziesii","(at3g17860 : 101.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment  induces their proteasome-mediated degradation. Furthermore, JAI3 negatively  regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00040445-RA","No alias","Pseudotsuga menziesii","(at5g46190 : 102.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G18375.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00041113-RA","No alias","Pseudotsuga menziesii","(at1g76990 : 546.0) ACT domain repeat 3 (ACR3); FUNCTIONS IN: amino acid binding; INVOLVED IN: nitrogen compound metabolic process, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-PII uridylyltransferase (InterPro:IPR010043), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1092.0) &  (original description: no original description)","protein_coding"
"PSME_00041980-RA","No alias","Pseudotsuga menziesii","(at3g18040 : 333.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 323.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00042652-RA","No alias","Pseudotsuga menziesii","(at1g47510 : 178.0) Encodes a phosphatidylinositol  polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA.; inositol polyphosphate 5-phosphatase 11 (5PTASE11); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: Endonuclease/exonuclease/phosphatase family protein (TAIR:AT1G65580.1). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"PSME_00043607-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 202.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 144.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"PSME_00044121-RA","No alias","Pseudotsuga menziesii","(at3g19000 : 299.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xhg2|fls_maldo : 137.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"PSME_00045392-RA","No alias","Pseudotsuga menziesii",""(at1g69500 : 338.0) Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers.  Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis.; ""cytochrome P450, family 704, subfamily B, polypeptide 1"" (CYP704B1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 24652 Blast hits to 24553 proteins in 1381 species: Archae - 44; Bacteria - 2338; Metazoa - 9085; Fungi - 5048; Plants - 7257; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). & (q43078|c97b1_pea : 97.8) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 676.0) &  (original description: no original description)"","protein_coding"
"PSME_00045745-RA","No alias","Pseudotsuga menziesii","(at1g53050 : 341.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G09600.1); Has 124596 Blast hits to 123234 proteins in 4130 species: Archae - 92; Bacteria - 13981; Metazoa - 46101; Fungi - 12764; Plants - 31065; Viruses - 453; Other Eukaryotes - 20140 (source: NCBI BLink). & (p23111|cdc2_maize : 156.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00045974-RA","No alias","Pseudotsuga menziesii","(p35684|rl3_orysj : 681.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g43170 : 669.0) Encodes a cytoplasmic ribosomal protein.; ribosomal protein 1 (RP1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: R-protein L3 B (TAIR:AT1G61580.1). & (reliability: 1338.0) &  (original description: no original description)","protein_coding"
"PSME_00046128-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 294.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at1g61720 : 290.0) Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.; BANYULS (BAN); FUNCTIONS IN: oxidoreductase activity, anthocyanidin reductase activity; INVOLVED IN: negative regulation of flavonoid biosynthetic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: C globular stage, seed development stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: dihydroflavonol 4-reductase (TAIR:AT5G42800.1); Has 9654 Blast hits to 9641 proteins in 1549 species: Archae - 92; Bacteria - 3374; Metazoa - 271; Fungi - 951; Plants - 2463; Viruses - 15; Other Eukaryotes - 2488 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"PSME_00046745-RA","No alias","Pseudotsuga menziesii","(at1g53240 : 364.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT3G15020.1); Has 17502 Blast hits to 17499 proteins in 5422 species: Archae - 240; Bacteria - 12205; Metazoa - 1281; Fungi - 536; Plants - 649; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (p83373|mdhm_fraan : 363.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"PSME_00047141-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 759.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 644.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"PSME_00047142-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 765.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 646.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1292.0) &  (original description: no original description)","protein_coding"
"PSME_00049234-RA","No alias","Pseudotsuga menziesii","(at2g25620 : 401.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity.  DBP1 is involved in plant-potyvirus interactions.  Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (reliability: 802.0) &  (original description: no original description)","protein_coding"
"PSME_00050089-RA","No alias","Pseudotsuga menziesii","(p48522|tcmo_catro : 785.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g30490 : 748.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (reliability: 1496.0) &  (original description: no original description)","protein_coding"
"PSME_00050271-RA","No alias","Pseudotsuga menziesii","(q42806|kpyc_soybn : 882.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 870.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (reliability: 1740.0) &  (original description: no original description)","protein_coding"
"PSME_00050431-RA","No alias","Pseudotsuga menziesii","(p51091|ldox_maldo : 434.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (at4g22880 : 431.0) encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.; leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"PSME_00050642-RA","No alias","Pseudotsuga menziesii","(q7xp59|glr31_orysa : 567.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (at2g32390 : 557.0) Encodes a ionotropic glutamate receptor ortholog, a member of a putative ligand-gated ion channel subunit family; glutamate receptor  3.5 (GLR3.5); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2). & (reliability: 1114.0) &  (original description: no original description)","protein_coding"
"PSME_00052834-RA","No alias","Pseudotsuga menziesii","(at3g47520 : 545.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (q42972|mdhg_orysa : 409.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Oryza sativa (Rice) & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00053452-RA","No alias","Pseudotsuga menziesii","(q42806|kpyc_soybn : 240.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g56350 : 239.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00054500-RA","No alias","Pseudotsuga menziesii","(at1g55320 : 209.0) Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.; acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 26488 Blast hits to 26111 proteins in 2320 species: Archae - 743; Bacteria - 16022; Metazoa - 855; Fungi - 842; Plants - 335; Viruses - 0; Other Eukaryotes - 7691 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00054970-RA","No alias","Pseudotsuga menziesii","(at5g54660 : 106.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19243|hsp11_pea : 96.3) 18.1 kDa class I heat shock protein (HSP 18.1) - Pisum sativum (Garden pea) & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00054975-RA","No alias","Pseudotsuga menziesii","(at1g08250 : 564.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (reliability: 1128.0) &  (original description: no original description)","protein_coding"
"PSME_00055054-RA","No alias","Pseudotsuga menziesii","(at3g02645 : 111.0) Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT3G50150.1). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00055369-RA","No alias","Pseudotsuga menziesii","(at1g57680 : 247.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"PSME_00055516-RA","No alias","Pseudotsuga menziesii","(q9sbq9|f3ph_pethy : 553.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 538.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"PSME_00056062-RA","No alias","Pseudotsuga menziesii","(at1g78570 : 1136.0) Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha.  The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in <i>E. coli</i>.; rhamnose biosynthesis 1 (RHM1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 54880 Blast hits to 54585 proteins in 3085 species: Archae - 917; Bacteria - 31981; Metazoa - 1168; Fungi - 566; Plants - 1527; Viruses - 106; Other Eukaryotes - 18615 (source: NCBI BLink). & (q8h0b2|arae3_orysa : 109.0) Probable UDP-arabinose 4-epimerase 3 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) - Oryza sativa (Rice) & (reliability: 2272.0) &  (original description: no original description)","protein_coding"
"PSME_00056615-RA","No alias","Pseudotsuga menziesii","(at1g08250 : 541.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.; arogenate dehydratase 6 (ADT6); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: prephenate dehydratase 1 (TAIR:AT2G27820.1); Has 7065 Blast hits to 7063 proteins in 2215 species: Archae - 179; Bacteria - 3948; Metazoa - 2; Fungi - 121; Plants - 264; Viruses - 0; Other Eukaryotes - 2551 (source: NCBI BLink). & (reliability: 1082.0) &  (original description: no original description)","protein_coding"
"Seita.1G009200.1","No alias","Setaria italica ","ER-tubule curvature-inducing protein *(Reticulon)","protein_coding"
"Seita.1G016000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G048900.1","No alias","Setaria italica ","ketoacyl-ACP synthase *(mtKAS))","protein_coding"
"Seita.1G095300.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & MAP-kinase protein kinase","protein_coding"
"Seita.1G097200.1","No alias","Setaria italica ","component *(BTE1) of DREAM cell cycle regulatory complex","protein_coding"
"Seita.1G182200.1","No alias","Setaria italica ","mitochondrial fission factor *(NETWORK/ELM1)","protein_coding"
"Seita.1G211100.1","No alias","Setaria italica ","multifunctional protein *(PHYLLO) involved in phylloquinone biosynthesis","protein_coding"
"Seita.1G241000.1","No alias","Setaria italica ","type-Ia DNA topoisomerase","protein_coding"
"Seita.1G246500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G264000.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding"
"Seita.1G301200.1","No alias","Setaria italica ","component *(NRPD4) of RNA polymerase IV complex & component *(NRPE4) of RNA polymerase V complex","protein_coding"
"Seita.1G329100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G330100.1","No alias","Setaria italica ","1,2-alpha-fucosyltransferase *(FUT)","protein_coding"
"Seita.1G368200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G027000.1","No alias","Setaria italica ","LRR-XIV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G042900.1","No alias","Setaria italica ","abscisic aldehyde oxidase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Seita.2G088500.1","No alias","Setaria italica ","RLCK-V receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G097400.1","No alias","Setaria italica ","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G098700.1","No alias","Setaria italica ","indole-3-acetic acid amidohydrolase *(ILR)","protein_coding"
"Seita.2G102900.1","No alias","Setaria italica ","component *(CAF1a/FAS1) of CAF1 histone chaperone complex","protein_coding"
"Seita.2G109100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G109200.1","No alias","Setaria italica ","aspartate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G142500.1","No alias","Setaria italica ","regulatory protein *(CYCLASE) of Programmed Cell Death","protein_coding"
"Seita.2G157900.1","No alias","Setaria italica ","alpha-1,6 mannosyltransferase *(ALG12)","protein_coding"
"Seita.2G192000.1","No alias","Setaria italica ","component *(CTC1) of telomere integrity maintenance complex","protein_coding"
"Seita.2G239800.1","No alias","Setaria italica ","PEPRK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G265800.1","No alias","Setaria italica ","uridine/cytidine kinase & EC_2.4 glycosyltransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G286700.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & pantothenate kinase","protein_coding"
"Seita.2G357200.1","No alias","Setaria italica ","component *(SANT) of histone deacetylation complex","protein_coding"
"Seita.3G019300.1","No alias","Setaria italica ","component *(Pex22) of receptor monoubiquitination system","protein_coding"
"Seita.3G038800.1","No alias","Setaria italica ","proton","protein_coding"
"Seita.3G069200.1","No alias","Setaria italica ","actin filament protein","protein_coding"
"Seita.3G071900.1","No alias","Setaria italica ","CORVET-specific component *(VPS3) of HOPS/CORVET membrane tethering complexes","protein_coding"
"Seita.3G078800.1","No alias","Setaria italica ","PERK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.3G080000.1","No alias","Setaria italica ","DNA chromomethylase *(CMT)","protein_coding"
"Seita.3G082900.1","No alias","Setaria italica ","regulatory protein *(TAM) involved in metaphase to anaphase transition & regulatory protein *(CYCA) of cell cycle","protein_coding"
"Seita.3G083800.1","No alias","Setaria italica ","myosin-SUN-WIP adaptor *(WIT)","protein_coding"
"Seita.3G112300.1","No alias","Setaria italica ","acyl-CoA","protein_coding"
"Seita.3G117900.1","No alias","Setaria italica ","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"Seita.3G165100.1","No alias","Setaria italica ","delta-1-pyrroline-5-carboxylate dehydrogenase","protein_coding"
"Seita.3G172400.1","No alias","Setaria italica ","subunit alpha *(QCR2) of cytochrome c reductase subcomplex & subunit alpha of MPP mitochondrial signal peptidase heterodimer & ATP-dependent phosphofructokinase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.3G202200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G231000.1","No alias","Setaria italica ","prephenate aminotransferase *(PPA-AT)","protein_coding"
"Seita.3G269800.1","No alias","Setaria italica ","thiamine diphosphokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.3G280100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G346200.1","No alias","Setaria italica ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Seita.3G346300.1","No alias","Setaria italica ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Seita.3G395100.1","No alias","Setaria italica ","RsmC-type rRNA methyltransferase","protein_coding"
"Seita.3G402400.1","No alias","Setaria italica ","D-xylulose kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G027000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G042900.1","No alias","Setaria italica ","regulatory protein *(DUO3) of male germ cell division","protein_coding"
"Seita.4G060400.1","No alias","Setaria italica ","RLCK-XV receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G061800.1","No alias","Setaria italica ","prolyl aminopeptidase *(PAP2)","protein_coding"
"Seita.4G238400.1","No alias","Setaria italica ","acyl-CoA","protein_coding"
"Seita.5G083100.1","No alias","Setaria italica ","subfamily ABCG transporter","protein_coding"
"Seita.5G110400.1","No alias","Setaria italica ","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G131200.1","No alias","Setaria italica ","polynucleotide kinase involved in ITS2 rRNA removal *(GRC3)","protein_coding"
"Seita.5G162800.1","No alias","Setaria italica ","clathrin uncoating protein *(AUL)","protein_coding"
"Seita.5G172300.1","No alias","Setaria italica ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Seita.5G222800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G243600.1","No alias","Setaria italica ","ATP","protein_coding"
"Seita.5G285800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G347200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G370700.1","No alias","Setaria italica ","histone *(H2A)","protein_coding"
"Seita.5G390600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G431100.1","No alias","Setaria italica ","class-I glucosidase I & EC_3.2 glycosylase","protein_coding"
"Seita.5G460100.1","No alias","Setaria italica ","component *(MLH1) of MLH1-PMS1 heterodimer & component *(MLH1) of MutLy endonuclease heterodimer","protein_coding"
"Seita.6G013900.1","No alias","Setaria italica ","component *(AUG1) of Augmin gamma-TuRC recruiting complex","protein_coding"
"Seita.6G014800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G073700.1","No alias","Setaria italica ","component *(MED21) of middle module of MEDIATOR transcription co-activator complex","protein_coding"
"Seita.6G112600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G128700.1","No alias","Setaria italica ","alpha-amylase-binding scaffold protein *(LSF1)","protein_coding"
"Seita.6G149200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G211200.1","No alias","Setaria italica ","component *(ISA1) of ISA1-ISA2 isoamylase heterodimer","protein_coding"
"Seita.6G255800.1","No alias","Setaria italica ","ketoacyl-ACP reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.7G048300.1","No alias","Setaria italica ","subfamily ABCG transporter","protein_coding"
"Seita.7G078500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G088900.1","No alias","Setaria italica ","deacetylase component *(HDA9) of HDA9-PWR deacetylation complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & histone deacetylase *(HDA8)","protein_coding"
"Seita.7G102100.1","No alias","Setaria italica ","Kinesin-7-type motor protein","protein_coding"
"Seita.7G144200.1","No alias","Setaria italica ","Trihelix-type transcription factor","protein_coding"
"Seita.7G206200.1","No alias","Setaria italica ","copper chaperone *(CCS)","protein_coding"
"Seita.7G212900.1","No alias","Setaria italica ","transcription factor *(REVEILLE)","protein_coding"
"Seita.7G258700.1","No alias","Setaria italica ","auxin efflux transporter *(ABCB19) & subfamily ABCB transporter","protein_coding"
"Seita.7G295600.1","No alias","Setaria italica ","LHW/LHL-type transcription factor & component *(LHW) of TMO5-LHW cytokinin control complex","protein_coding"
"Seita.8G106200.1","No alias","Setaria italica ","glutathione peroxidase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"Seita.8G144200.1","No alias","Setaria italica ","nucleocytoplasmic transport karyopherin *(TNPO3)","protein_coding"
"Seita.9G087400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G091000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G100500.1","No alias","Setaria italica ","regulatory component *(CYCH) of CAK kinase module & regulatory protein *(CYCH) of cell cycle & regulatory subunit *(CYCH) of CAK kinase module","protein_coding"
"Seita.9G114400.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G132100.1","No alias","Setaria italica ","hydroxyproline-O-galactosyltransferase *(GALT) & hydroxyproline O-galactosyltransferase *(GALT)","protein_coding"
"Seita.9G215000.1","No alias","Setaria italica ","component *(PRL1/MAC2) of MAC spliceosome-associated complex","protein_coding"
"Seita.9G216300.1","No alias","Setaria italica ","proton-translocating pyrophosphatase *(VHP2)","protein_coding"
"Seita.9G234400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G282300.1","No alias","Setaria italica ","microtubule assembly factor *(TCS1)","protein_coding"
"Seita.9G283200.1","No alias","Setaria italica ","rbcL-mRNA stability factor *(MRL1)","protein_coding"
"Seita.9G313300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G397900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G398200.1","No alias","Setaria italica ","glutathione peroxidase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"Seita.9G436700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G450400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G467800.1","No alias","Setaria italica ","RLCK-XI receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G556900.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding"
"Sobic.001G014900.1","No alias","Sorghum bicolor ","medium-chain acyl-ACP synthetase","protein_coding"
"Sobic.001G051200.1","No alias","Sorghum bicolor ","R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex & R-type VAMP7-group component of SNARE longin membrane fusion complex","protein_coding"
"Sobic.001G058300.1","No alias","Sorghum bicolor ","LRR-domain extensin","protein_coding"
"Sobic.001G087600.1","No alias","Sorghum bicolor ","component *(EMF2/VRN2/FIS2) of PRC2 histone methylation complex","protein_coding"
"Sobic.001G097100.3","No alias","Sorghum bicolor ","serine hydroxymethyltransferase *(SHM) & serine hydroxymethyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.001G108500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G151600.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.001G191600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G208000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G311100.1","No alias","Sorghum bicolor ","ubiquitin-proteasome shuttle factor *(DSK2)","protein_coding"
"Sobic.001G320700.1","No alias","Sorghum bicolor ","arogenate dehydratase *(ADT)","protein_coding"
"Sobic.001G344000.1","No alias","Sorghum bicolor ","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"Sobic.001G414500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G462500.1","No alias","Sorghum bicolor ","metal cation transporter *(NRAMP) & metal cation transporter *(NRAMP)","protein_coding"
"Sobic.001G475200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G034750.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G132300.1","No alias","Sorghum bicolor ","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Sobic.002G157100.1","No alias","Sorghum bicolor ","nucleotide exchange factor *(MGE)","protein_coding"
"Sobic.002G177700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G265300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G332750.1","No alias","Sorghum bicolor ","subunit H of V-type ATPase peripheral V1 subcomplex & bHLH-type transcription factor & transcriptional regulator *(DYT1/AMS)","protein_coding"
"Sobic.002G374300.2","No alias","Sorghum bicolor ","FRS/FRF-type transcription factor","protein_coding"
"Sobic.002G397900.1","No alias","Sorghum bicolor ","component *(mL46) of large mitoribosomal-subunit proteome","protein_coding"
"Sobic.002G412300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G033000.1","No alias","Sorghum bicolor ","component *(ALY) of DREAM cell cycle regulatory complex & MYB-RELATED transcription factor *(ALY)","protein_coding"
"Sobic.003G088400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G099300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G124100.1","No alias","Sorghum bicolor ","PLP-independent amino acid racemase","protein_coding"
"Sobic.003G149300.1","No alias","Sorghum bicolor ","metal-citrate complex transporter *(FRD)","protein_coding"
"Sobic.003G169900.1","No alias","Sorghum bicolor ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Sobic.003G179600.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & callose synthase","protein_coding"
"Sobic.003G189700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G192000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G205900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G308200.1","No alias","Sorghum bicolor ","nuclear lamina lamin-like protein *(CRWN)","protein_coding"
"Sobic.003G341700.2","No alias","Sorghum bicolor ","component *(EXO70) of Exocyst complex","protein_coding"
"Sobic.003G442500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G443300.1","No alias","Sorghum bicolor ","electron shuttle component *(Cyt-b5) of CER1-CER3 alkane-forming complex & cytochrome electron shuttle hemoprotein *(Cyt-b5)","protein_coding"
"Sobic.004G030501.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G040200.2","No alias","Sorghum bicolor ","MAP-kinase protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G042100.1","No alias","Sorghum bicolor ","RING-H2-class CTL-subclass E3 ubiquitin ligase","protein_coding"
"Sobic.004G093600.1","No alias","Sorghum bicolor ","EC_2.3 acyltransferase & E2 component of mitochondrial pyruvate dehydrogenase complex","protein_coding"
"Sobic.004G118000.2","No alias","Sorghum bicolor ","ligand-gated cation channel *(GLR)","protein_coding"
"Sobic.004G143900.1","No alias","Sorghum bicolor ","indole-3-glycerol phosphate synthase","protein_coding"
"Sobic.004G144700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G289400.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.004G321900.1","No alias","Sorghum bicolor ","regulatory component *(RPT1) of 26S proteasome","protein_coding"
"Sobic.004G345900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G348400.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.004G354400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G017200.1","No alias","Sorghum bicolor ","CTP","protein_coding"
"Sobic.005G059100.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G092900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G128800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G130400.1","No alias","Sorghum bicolor ","EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase","protein_coding"
"Sobic.005G215900.1","No alias","Sorghum bicolor ","Bowman-Birk protease inhibitor","protein_coding"
"Sobic.006G014000.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor & non-peroxisomal hydroxypyruvate reductase *(HPR)","protein_coding"
"Sobic.006G046600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G054500.1","No alias","Sorghum bicolor ","MUB ubiquitin-fold protein","protein_coding"
"Sobic.006G122400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G128900.1","No alias","Sorghum bicolor ","CDKG protein kinase & catalytic component *(CDKG) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G146200.1","No alias","Sorghum bicolor ","coniferin beta-glucosidase & EC_3.2 glycosylase","protein_coding"
"Sobic.006G182000.1","No alias","Sorghum bicolor ","component *(LHW) of TMO5-LHW cytokinin control complex & LHW/LHL-type transcription factor","protein_coding"
"Sobic.006G233800.1","No alias","Sorghum bicolor ","EC_2.3 acyltransferase","protein_coding"
"Sobic.007G037900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G051700.1","No alias","Sorghum bicolor ","auxin signalling transcriptional co-repressor *(TPL/TPR) & transcriptional co-repressor *(TPL/TPR)","protein_coding"
"Sobic.007G075100.2","No alias","Sorghum bicolor ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Sobic.007G096000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G151100.1","No alias","Sorghum bicolor ","EC_1.3 oxidoreductase acting on CH-CH group of donor & oxophytodienoate reductase *(OPR3)","protein_coding"
"Sobic.007G180600.1","No alias","Sorghum bicolor ","cargo receptor protein *(PUX7/8/9/13)","protein_coding"
"Sobic.007G219900.1","No alias","Sorghum bicolor ","galactinol-sucrose galactosyltransferase","protein_coding"
"Sobic.008G107200.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.008G116000.4","No alias","Sorghum bicolor ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Sobic.008G116100.1","No alias","Sorghum bicolor ","3-dehydroquinate dehydratase and shikimate dehydrogenase","protein_coding"
"Sobic.008G124400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G124600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G190100.1","No alias","Sorghum bicolor ","acetyl-CoA C-acyltransferase & EC_2.3 acyltransferase","protein_coding"
"Sobic.009G019200.2","No alias","Sorghum bicolor ","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.009G040900.2","No alias","Sorghum bicolor ","sucrose-phosphate phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.009G050500.1","No alias","Sorghum bicolor ","scaffold protein NFU4/5 of mitochondrial ISC system transfer phase","protein_coding"
"Sobic.009G163600.1","No alias","Sorghum bicolor ","component *(RRP41) of exosome EXO9 core complex","protein_coding"
"Sobic.009G221701.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G007400.1","No alias","Sorghum bicolor ","beta-type-2 component *(PBB) of 26S proteasome","protein_coding"
"Sobic.010G016400.1","No alias","Sorghum bicolor ","peroxisomal fission factor *(PEX11)","protein_coding"
"Sobic.010G072000.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.010G075600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G110500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G152200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G175100.1","No alias","Sorghum bicolor ","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G278500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g005030","No alias","Solanum lycopersicum","MAP kinase kinase kinase 1","protein_coding"
"Solyc01g006350","No alias","Solanum lycopersicum","Callose synthase-like protein (AHRD V3.3 *-* A0A072VRY1_MEDTR)","protein_coding"
"Solyc01g006360","No alias","Solanum lycopersicum","glucan synthase-like 10 (AHRD V3.3 *** AT3G07160.3)","protein_coding"
"Solyc01g008020","No alias","Solanum lycopersicum","Equilibrative nucleoside transporter (AHRD V3.3 *** A0A103YAP6_CYNCS)","protein_coding"
"Solyc01g008180","No alias","Solanum lycopersicum","Remorin family protein (AHRD V3.3 *** B9HVM6_POPTR)","protein_coding"
"Solyc01g021670","No alias","Solanum lycopersicum","transmembrane protein, putative (Protein of unknown function, DUF538) (AHRD V3.3 *-* AT5G19860.1)","protein_coding"
"Solyc01g066440","No alias","Solanum lycopersicum","Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 --* AT1G18335.3)","protein_coding"
"Solyc01g067000","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT3G16510.1)","protein_coding"
"Solyc01g067750","No alias","Solanum lycopersicum","dehydroquinate dehydratase/shikimate:NADP oxidoreductase","protein_coding"
"Solyc01g068100","No alias","Solanum lycopersicum","Squamosa promoter binding protein12a","protein_coding"
"Solyc01g068610","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g087530","No alias","Solanum lycopersicum","Zinc transporter (AHRD V3.3 *** A0A0K9NP89_ZOSMR)","protein_coding"
"Solyc01g094830","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *-* K4AZM3_SOLLC)","protein_coding"
"Solyc01g098090","No alias","Solanum lycopersicum","meloidogyne-induced giant cell protein DB214","protein_coding"
"Solyc01g098610","No alias","Solanum lycopersicum","glutathione synthetase 2","protein_coding"
"Solyc01g100110","No alias","Solanum lycopersicum","Phosphatase 2C family protein (AHRD V3.3 *** A0A061F3G7_THECC)","protein_coding"
"Solyc01g100520","No alias","Solanum lycopersicum","Clp protease 2 proteolytic subunit","protein_coding"
"Solyc01g104410","No alias","Solanum lycopersicum","Sterol glucosyltransferase-like protein (AHRD V3.3 *** A0A072V719_MEDTR)","protein_coding"
"Solyc01g108390","No alias","Solanum lycopersicum","Proteinase inhibitor (AHRD V3.3 *** A0A0R4WFE3_TOBAC)","protein_coding"
"Solyc01g108430","No alias","Solanum lycopersicum","Nucleic acid binding protein, putative (AHRD V3.3 *** B9S791_RICCO)","protein_coding"
"Solyc01g110540","No alias","Solanum lycopersicum","protein Aucsia-2","protein_coding"
"Solyc01g111520","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5)","protein_coding"
"Solyc01g111600","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** AT4G35060.1)","protein_coding"
"Solyc02g022930","No alias","Solanum lycopersicum","3-hydroxyisobutyrate dehydrogenase (AHRD V3.3 *** K4B541_SOLLC)","protein_coding"
"Solyc02g066920","No alias","Solanum lycopersicum","chlororespiratory reduction 7 (AHRD V3.3 *** AT5G39210.1)","protein_coding"
"Solyc02g067370","No alias","Solanum lycopersicum","Nucleosome assembly protein family (AHRD V3.3 *** A9RDJ7_PHYPA)","protein_coding"
"Solyc02g068080","No alias","Solanum lycopersicum","Chloride channel protein (AHRD V3.3 *** M1A9T9_SOLTU)","protein_coding"
"Solyc02g069100","No alias","Solanum lycopersicum","Cathepsin B-like cysteine protease (AHRD V3.3 *** B7FJ05_MEDTR)","protein_coding"
"Solyc02g069240","No alias","Solanum lycopersicum","LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT3G05320.3)","protein_coding"
"Solyc02g077850","No alias","Solanum lycopersicum","Leucine-rich repeat receptor-like protein kinase (AHRD V3.3 *** A0A0K9NYE0_ZOSMR)","protein_coding"
"Solyc02g077980","No alias","Solanum lycopersicum","Late embryogenesis abundant protein (LEA) family protein (AHRD V3.3 --* AT4G13230.1)","protein_coding"
"Solyc02g078500","No alias","Solanum lycopersicum","Stem-specific protein TSJT1, putative (AHRD V3.3 *** B9RZ68_RICCO)","protein_coding"
"Solyc02g078550","No alias","Solanum lycopersicum","RNA polymerase II C-terminal domain phosphatase-like protein (AHRD V3.3 *** A0A0K9PYY1_ZOSMR)","protein_coding"
"Solyc02g081160","No alias","Solanum lycopersicum","Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (AHRD V3.3 *** PFPB_SOLTU)","protein_coding"
"Solyc02g081430","No alias","Solanum lycopersicum","microsomal glutathione s-transferase (AHRD V3.3 *** AT1G65820.1)","protein_coding"
"Solyc02g081880","No alias","Solanum lycopersicum","Molybdenum cofactor sulfurase family protein (AHRD V3.3 *** AT1G30910.1)","protein_coding"
"Solyc02g082840","No alias","Solanum lycopersicum","Protein GRIP (AHRD V3.3 *** A0A0B2S9J7_GLYSO)","protein_coding"
"Solyc02g082900","No alias","Solanum lycopersicum","Adipocyte plasma membrane-associated protein (AHRD V3.3 *** W9T0J8_9ROSA)","protein_coding"
"Solyc02g084550","No alias","Solanum lycopersicum","altered inheritance of mitochondria protein (AHRD V3.3 *** AT3G51100.1)","protein_coding"
"Solyc02g085220","No alias","Solanum lycopersicum","Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)","protein_coding"
"Solyc02g086130","No alias","Solanum lycopersicum","DnaA initiator-associating diaA (AHRD V3.3 *** A0A0B0PTA6_GOSAR)","protein_coding"
"Solyc02g093110","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme (AHRD V3.3 *** B3TLZ3_ELAGV)","protein_coding"
"Solyc02g093470","No alias","Solanum lycopersicum","lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** AT1G67850.7)","protein_coding"
"Solyc02g093940","No alias","Solanum lycopersicum","Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT4G14605.2)","protein_coding"
"Solyc03g006080","No alias","Solanum lycopersicum","LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR)","protein_coding"
"Solyc03g007480","No alias","Solanum lycopersicum","myosin heavy chain-like protein (AHRD V3.3 *** AT5G53310.1)","protein_coding"
"Solyc03g007610","No alias","Solanum lycopersicum","DnaJ domain-containing protein (AHRD V3.3 *** A0A124SIC1_CYNCS)","protein_coding"
"Solyc03g007990","No alias","Solanum lycopersicum","Conserved peptide upstream open reading frame 14 (AHRD V3.3 *** B3H629_ARATH)","protein_coding"
"Solyc03g013160","No alias","Solanum lycopersicum","Amino acid transporter, putative (AHRD V3.3 *** B9T0U1_RICCO)","protein_coding"
"Solyc03g019770","No alias","Solanum lycopersicum","Testis-expressed sequence 2 protein (AHRD V3.3 *** A0A0B2Q462_GLYSO)","protein_coding"
"Solyc03g019890","No alias","Solanum lycopersicum","beta-galactosidase 7","protein_coding"
"Solyc03g031840","No alias","Solanum lycopersicum","expansin precursor 3","protein_coding"
"Solyc03g045070","No alias","Solanum lycopersicum","ammonium transporter AF118858","protein_coding"
"Solyc03g059070","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** U5FGJ0_POPTR)","protein_coding"
"Solyc03g063280","No alias","Solanum lycopersicum","Emsy N terminus domain-containing family protein (AHRD V3.3 *** B9HPS6_POPTR)","protein_coding"
"Solyc03g065250","No alias","Solanum lycopersicum","Fatty acid hydroxylase superfamily protein (AHRD V3.3 *** A0A072TKE8_MEDTR)","protein_coding"
"Solyc03g080090","No alias","Solanum lycopersicum","Nam-like protein 1","protein_coding"
"Solyc03g083400","No alias","Solanum lycopersicum","CCT motif family protein (AHRD V3.3 *** A0A061G1S7_THECC)","protein_coding"
"Solyc03g083610","No alias","Solanum lycopersicum","UMP-CMP kinase (AHRD V3.3 *** A0A162A1U3_DAUCA)","protein_coding"
"Solyc03g093610","No alias","Solanum lycopersicum","ethylene response factor A.2","protein_coding"
"Solyc03g093880","No alias","Solanum lycopersicum","U6 snRNA phosphodiesterase (AHRD V3.3 *** K4BIR4_SOLLC)","protein_coding"
"Solyc03g097270","No alias","Solanum lycopersicum","cystatin 9","protein_coding"
"Solyc03g111330","No alias","Solanum lycopersicum","UPF0235 protein At5g63440 (AHRD V3.3 *** Y6344_ARATH)","protein_coding"
"Solyc03g111710","No alias","Solanum lycopersicum","BTB/POZ and TAZ domain protein (AHRD V3.3 *** G7JMM8_MEDTR)","protein_coding"
"Solyc03g111830","No alias","Solanum lycopersicum","Protein-L-isoaspartate O-methyltransferase (AHRD V3.3 *** K4BK44_SOLLC)","protein_coding"
"Solyc03g112240","No alias","Solanum lycopersicum","LOW QUALITY:pyrroline-5-carboxylate reductase (AHRD V3.3 *-* AT4G03600.1)","protein_coding"
"Solyc03g115500","No alias","Solanum lycopersicum","Heparanase 1-like protein (AHRD V3.3 *** T2D261_TOBAC)","protein_coding"
"Solyc03g117550","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9GVL5_POPTR)","protein_coding"
"Solyc03g118280","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RA74_RICCO)","protein_coding"
"Solyc03g118650","No alias","Solanum lycopersicum","Aldose 1-epimerase (AHRD V3.3 *** K4BM14_SOLLC)","protein_coding"
"Solyc03g119080","No alias","Solanum lycopersicum","beta-mannosidase enzyme","protein_coding"
"Solyc03g119970","No alias","Solanum lycopersicum","ATP/ADP transporter (AHRD V3.3 *** A0A0X9Q301_MENSP)","protein_coding"
"Solyc03g121360","No alias","Solanum lycopersicum","Charged multivesicular body 1 (AHRD V3.3 *** A0A0B0N0L1_GOSAR)","protein_coding"
"Solyc03g121560","No alias","Solanum lycopersicum","AT1G17665-like protein (AHRD V3.3 *** A0A0G4AP21_9ROSI)","protein_coding"
"Solyc03g123630","No alias","Solanum lycopersicum","pectin methylesterase","protein_coding"
"Solyc04g007070","No alias","Solanum lycopersicum","Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *** AT5G38350.1)","protein_coding"
"Solyc04g008050","No alias","Solanum lycopersicum","Two-component response regulator (AHRD V3.3 *** W9QMB4_9ROSA)","protein_coding"
"Solyc04g011580","No alias","Solanum lycopersicum","Pumilio, putative (AHRD V3.3 *** B9SDY2_RICCO)","protein_coding"
"Solyc04g024520","No alias","Solanum lycopersicum","Protein TSSC4 (AHRD V3.3 *** A0A0B0PXY2_GOSAR)","protein_coding"
"Solyc04g025260","No alias","Solanum lycopersicum","Endoplasmic reticulum metallopeptidase 1 (AHRD V3.3 *** A0A151SE95_CAJCA)","protein_coding"
"Solyc04g026360","No alias","Solanum lycopersicum","AP-1 complex subunit mu-1 (AHRD V3.3 *** AP1M1_ARATH)","protein_coding"
"Solyc04g049080","No alias","Solanum lycopersicum","Tetraspanin family protein (AHRD V3.3 *** I3SAK4_MEDTR)","protein_coding"
"Solyc04g050040","No alias","Solanum lycopersicum","mitochondrial substrate carrier family protein (AHRD V3.3 *** AT2G35800.1)","protein_coding"
"Solyc04g050810","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g050820","No alias","Solanum lycopersicum","myo-inositol-1-phosphate synthase 1 (AHRD V3.3 *** AT4G39800.1)","protein_coding"
"Solyc04g054400","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A061DJT5_THECC)","protein_coding"
"Solyc04g057890","No alias","Solanum lycopersicum","ganglioside-induced differentiation-associated protein 1","protein_coding"
"Solyc04g071550","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g078290","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** A0A103XWR5_CYNCS)","protein_coding"
"Solyc04g078740","No alias","Solanum lycopersicum","Subtilisin-like protease (AHRD V3.3 *** W9SHY0_9ROSA)","protein_coding"
"Solyc04g080310","No alias","Solanum lycopersicum","DNA repair metallo-beta-lactamase family protein (AHRD V3.3 --* AT3G26680.4)","protein_coding"
"Solyc04g080870","No alias","Solanum lycopersicum","ATP-dependent protease La (LON) domain protein (AHRD V3.3 *-* AT1G75460.1)","protein_coding"
"Solyc04g081480","No alias","Solanum lycopersicum","Dihydroxy-acid dehydratase 1 (AHRD V3.3 *** A0A0B0NRA9_GOSAR)","protein_coding"
"Solyc04g082440","No alias","Solanum lycopersicum","U-box domain-containing 15-like protein (AHRD V3.3 *** A0A0B0PZ68_GOSAR)","protein_coding"
"Solyc05g006050","No alias","Solanum lycopersicum","cyclinD1_1","protein_coding"
"Solyc05g006910","No alias","Solanum lycopersicum","AMP deaminase (AHRD V3.3 *** A0A061ED95_THECC)","protein_coding"
"Solyc05g007140","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** Q2HTW4_MEDTR)","protein_coding"
"Solyc05g014970","No alias","Solanum lycopersicum","Urease (AHRD V3.3 *** K4BYL5_SOLLC)","protein_coding"
"Solyc05g024430","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT4G13500.1)","protein_coding"
"Solyc05g053300","No alias","Solanum lycopersicum","dihydrolipoamide dehydrogenase precursor","protein_coding"
"Solyc05g054240","No alias","Solanum lycopersicum","Protein arginine n-methyltransferase, putative (AHRD V3.3 *** B9RT51_RICCO)","protein_coding"
"Solyc05g055450","No alias","Solanum lycopersicum","RNA-binding Nova-1 (AHRD V3.3 *** A0A0B0MMT7_GOSAR)","protein_coding"
"Solyc05g055910","No alias","Solanum lycopersicum","vacuolar sorting-associated protein (DUF946) (AHRD V3.3 *** AT3G04350.1)","protein_coding"
"Solyc06g007170","No alias","Solanum lycopersicum","Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)","protein_coding"
"Solyc06g009060","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G02840.1)","protein_coding"
"Solyc06g035870","No alias","Solanum lycopersicum","Membrane steroid-binding protein (AHRD V3.3 *** G5DXK7_SILLA)","protein_coding"
"Solyc06g054020","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G05460.2)","protein_coding"
"Solyc06g059810","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** A0A061G9Q6_THECC)","protein_coding"
"Solyc06g059960","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase ASHH2 (AHRD V3.3 *-* W9QJR6_9ROSA)","protein_coding"
"Solyc06g061230","No alias","Solanum lycopersicum","Metallocarboxypeptidase inhibitor (AHRD V3.3 -** M1D4V9_SOLTU)","protein_coding"
"Solyc06g065460","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc06g067970","No alias","Solanum lycopersicum","DUF1644 family protein (AHRD V3.3 *** G7LIM9_MEDTR)","protein_coding"
"Solyc06g068090","No alias","Solanum lycopersicum","phospholipase PLDa1","protein_coding"
"Solyc06g073560","No alias","Solanum lycopersicum","Acyl-CoA dehydrogenase, putative (AHRD V3.3 *** B9SK49_RICCO)","protein_coding"
"Solyc06g084010","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc06g084460","No alias","Solanum lycopersicum","Shikimate dehydrogenase, 3-dehydroquinate dehydratase (AHRD V3.3 *** A0A0K9PLS3_ZOSMR)","protein_coding"
"Solyc07g006890","No alias","Solanum lycopersicum","Cytochrome P450, putative (AHRD V3.3 *** B9S4U5_RICCO)","protein_coding"
"Solyc07g007050","No alias","Solanum lycopersicum","Zinc finger, SWIM-type (AHRD V3.3 *** A0A118JSI3_CYNCS)","protein_coding"
"Solyc07g047670","No alias","Solanum lycopersicum","Pescadillo homolog (AHRD V3.3 *** K4CEX3_SOLLC)","protein_coding"
"Solyc07g052390","No alias","Solanum lycopersicum","glutamate receptor-like 3.1","protein_coding"
"Solyc07g052730","No alias","Solanum lycopersicum","formin I2I isoform","protein_coding"
"Solyc07g062270","No alias","Solanum lycopersicum","Gamma-glutamyl hydrolase, putative (AHRD V3.3 *** B9SEV4_RICCO)","protein_coding"
"Solyc07g063750","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** M1CC72_SOLTU)","protein_coding"
"Solyc07g064760","No alias","Solanum lycopersicum","Eukaryotic release factor 1 (eRF1) family protein (AHRD V3.3 --* AT4G27650.3)","protein_coding"
"Solyc07g065820","No alias","Solanum lycopersicum","Calcineurin B (AHRD V3.3 *** Q8L7F6_PEA)","protein_coding"
"Solyc07g066320","No alias","Solanum lycopersicum","DNA repair protein recA (AHRD V3.3 *** U5GXJ6_POPTR)","protein_coding"
"Solyc08g006960","No alias","Solanum lycopersicum","AP-2 complex subunit mu (AHRD V3.3 *** AP2M_ARATH)","protein_coding"
"Solyc08g015860","No alias","Solanum lycopersicum","Rab GDP dissociation inhibitor (AHRD V3.3 *** C0LSK7_NICBE)","protein_coding"
"Solyc08g041710","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT2G25270.1)","protein_coding"
"Solyc08g045850","No alias","Solanum lycopersicum","pentatricopeptide repeat-containing protein","protein_coding"
"Solyc08g061140","No alias","Solanum lycopersicum","overexpressor of cationic peroxidase 3 (AHRD V3.3 *** AT5G11270.1)","protein_coding"
"Solyc08g065970","No alias","Solanum lycopersicum","Sigma factor (AHRD V3.3 *** A0A0G2STQ0_9ROSI)","protein_coding"
"Solyc08g066610","No alias","Solanum lycopersicum","EPIDERMAL PATTERNING FACTOR-like protein 9 (AHRD V3.3 *** A0A0B2PPB1_GLYSO)","protein_coding"
"Solyc08g066810","No alias","Solanum lycopersicum","Glycosyl hydrolase family 5 protein (AHRD V3.3 *** D7KPG3_ARALL)","protein_coding"
"Solyc08g074490","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 --* M5XW04_PRUPE)","protein_coding"
"Solyc08g077790","No alias","Solanum lycopersicum","peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** AT4G17070.1)","protein_coding"
"Solyc08g077920","No alias","Solanum lycopersicum","Isocitrate dehydrogenase [NAD] subunit, mitochondrial (AHRD V3.3 *** K4CNF1_SOLLC)","protein_coding"
"Solyc08g078820","No alias","Solanum lycopersicum","Autophagy-related protein (AHRD V3.3 *** K4CNP1_SOLLC)","protein_coding"
"Solyc08g079240","No alias","Solanum lycopersicum","(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (AHRD V3.3 *** A0A0B0NEC9_GOSAR)","protein_coding"
"Solyc08g082430","No alias","Solanum lycopersicum","Nucleoside diphosphate kinase (AHRD V3.3 *** K4CPN9_SOLLC)","protein_coding"
"Solyc09g006000","No alias","Solanum lycopersicum","zinc/iron-chelating domain protein (AHRD V3.3 *** AT5G02710.3)","protein_coding"
"Solyc09g007310","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A072VW29_MEDTR)","protein_coding"
"Solyc09g009170","No alias","Solanum lycopersicum","ACI14","protein_coding"
"Solyc09g010450","No alias","Solanum lycopersicum","Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G53700.1)","protein_coding"
"Solyc09g031970","No alias","Solanum lycopersicum","Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** K4CSQ2_SOLLC)","protein_coding"
"Solyc09g047930","No alias","Solanum lycopersicum","maternal effect embryo arrest protein (AHRD V3.3 *** AT3G07510.3)","protein_coding"
"Solyc09g059600","No alias","Solanum lycopersicum","GPI transamidase component PIG-S (AHRD V3.3 *** A0A0B2PTJ3_GLYSO)","protein_coding"
"Solyc09g065760","No alias","Solanum lycopersicum","DUF506 family protein (AHRD V3.3 *** G7ICN8_MEDTR)","protein_coding"
"Solyc09g065810","No alias","Solanum lycopersicum","Guanylate-binding family protein (AHRD V3.3 *** AT2G38840.1)","protein_coding"
"Solyc09g076030","No alias","Solanum lycopersicum","Photosystem II protein (AHRD V3.3 *-* A0A1D1ZBF0_9ARAE)","protein_coding"
"Solyc09g090070","No alias","Solanum lycopersicum","phosphate transporter 1","protein_coding"
"Solyc09g091700","No alias","Solanum lycopersicum","NADP-dependent alkenal double bond reductase (AHRD V3.3 *** I3SE71_MEDTR)","protein_coding"
"Solyc10g005880","No alias","Solanum lycopersicum","Uridine kinase (AHRD V3.3 *** A0A022QIW2_ERYGU)","protein_coding"
"Solyc10g006530","No alias","Solanum lycopersicum","Photosynthetic NDH subcomplex L 3 (AHRD V3.3 *** A0A0F7CYJ0_9ROSI)","protein_coding"
"Solyc10g006540","No alias","Solanum lycopersicum","Formin-like protein (AHRD V3.3 *** K4CXI5_SOLLC)","protein_coding"
"Solyc10g009240","No alias","Solanum lycopersicum","3-ketoacyl-CoA synthase (AHRD V3.3 *** B9GRP8_POPTR)","protein_coding"
"Solyc10g018540","No alias","Solanum lycopersicum","DNA mismatch repair protein MutS (AHRD V3.3 *-* G7K3K2_MEDTR)","protein_coding"
"Solyc10g038080","No alias","Solanum lycopersicum","Shikimate dehydrogenase, 3-dehydroquinate dehydratase (AHRD V3.3 *** A0A0K9PLS3_ZOSMR)","protein_coding"
"Solyc10g047960","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT5G65810.1)","protein_coding"
"Solyc10g049360","No alias","Solanum lycopersicum","cyclin A3_6","protein_coding"
"Solyc10g052880","No alias","Solanum lycopersicum","LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** A0A061DFG6_THECC)","protein_coding"
"Solyc10g054320","No alias","Solanum lycopersicum","Coiled-coil domain-containing 90B, mitochondrial (AHRD V3.3 *** A0A0B0NYS6_GOSAR)","protein_coding"
"Solyc10g075020","No alias","Solanum lycopersicum","Elongation factor P family protein (AHRD V3.3 *** A0A061EHF6_THECC)","protein_coding"
"Solyc10g079050","No alias","Solanum lycopersicum","BHLH transcription factor o95","protein_coding"
"Solyc10g079110","No alias","Solanum lycopersicum","1-acyl-sn-glycerol-3-phosphate acyltransferase (AHRD V3.3 *** Q2Z1Y8_PRUMU)","protein_coding"
"Solyc10g081100","No alias","Solanum lycopersicum","Splicing factor 3B subunit 1 (AHRD V3.3 *** A0A1D1YF64_9ARAE)","protein_coding"
"Solyc10g081650","No alias","Solanum lycopersicum","carotenoid isomerase","protein_coding"
"Solyc10g083720","No alias","Solanum lycopersicum","Pyruvate kinase family protein (AHRD V3.3 *** AT3G52990.1)","protein_coding"
"Solyc10g084180","No alias","Solanum lycopersicum","Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI)","protein_coding"
"Solyc10g085600","No alias","Solanum lycopersicum","BTB/POZ domain-containing protein FBL11 (AHRD V3.3 *** A0A0B2QG81_GLYSO)","protein_coding"
"Solyc10g085720","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9MYL8_POPTR)","protein_coding"
"Solyc11g006320","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)","protein_coding"
"Solyc11g010370","No alias","Solanum lycopersicum","ENTH/ANTH/VHS superfamily protein, putative (AHRD V3.3 *** A0A061DPV2_THECC)","protein_coding"
"Solyc11g010700","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7MTZ0_ARALL)","protein_coding"
"Solyc11g066400","No alias","Solanum lycopersicum","Zinc finger family protein (AHRD V3.3 *** B9HQP7_POPTR)","protein_coding"
"Solyc11g072950","No alias","Solanum lycopersicum","E3 UFM1-protein ligase 1 (AHRD V3.3 *** A0A103XPK8_CYNCS)","protein_coding"
"Solyc12g005010","No alias","Solanum lycopersicum","actin cytoskeleton-regulatory complex pan-like protein (AHRD V3.3 *** AT1G50660.1)","protein_coding"
"Solyc12g007060","No alias","Solanum lycopersicum","LOW QUALITY:serine-rich protein-like protein (AHRD V3.3 --* AT5G55980.1)","protein_coding"
"Solyc12g007140","No alias","Solanum lycopersicum","Actin-binding LIM 3 (AHRD V3.3 *** A0A0B0MT11_GOSAR)","protein_coding"
"Solyc12g008640","No alias","Solanum lycopersicum","Gamma-glutamyltranspeptidase 1 (AHRD V3.3 *** A0A0B0NB37_GOSAR)","protein_coding"
"Solyc12g009180","No alias","Solanum lycopersicum","RmlC-like jelly roll fold protein (AHRD V3.3 *** AT1G19130.1)","protein_coding"
"Solyc12g010860","No alias","Solanum lycopersicum","tft8","protein_coding"
"Solyc12g013800","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)","protein_coding"
"Solyc12g014290","No alias","Solanum lycopersicum","multiprotein bridging factor 1c","protein_coding"
"Solyc12g014380","No alias","Solanum lycopersicum","glucose-6-phosphate isomerase DQ451687","protein_coding"
"Solyc12g015640","No alias","Solanum lycopersicum","Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT5G55580.1)","protein_coding"
"Solyc12g019540","No alias","Solanum lycopersicum","membrane steroid binding protein 1 (AHRD V3.3 --* AT5G52240.2)","protein_coding"
"Solyc12g019890","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SHH6_RICCO)","protein_coding"
"Solyc12g044740","No alias","Solanum lycopersicum","ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** AT3G21280.1)","protein_coding"
"Solyc12g049560","No alias","Solanum lycopersicum","Ethylene-responsive transcription factor (AHRD V3.3 *** I6MBV0_JATCU)","protein_coding"
"Solyc12g055980","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g056030","No alias","Solanum lycopersicum","ribosome biogenesis protein (AHRD V3.3 *** AT2G01640.2),Pfam:PF15341","protein_coding"
"Solyc12g088310","No alias","Solanum lycopersicum","FAD/NAD(P)-binding oxidoreductase (AHRD V3.3 --* AT1G15140.3)","protein_coding"
"Solyc12g089000","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT4G34370.1)","protein_coding"
"Solyc12g089110","No alias","Solanum lycopersicum","dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit (AHRD V3.3 --* AT3G09455.2)","protein_coding"
"Solyc12g095850","No alias","Solanum lycopersicum","Tryptophan-tRNA ligase (AHRD V3.3 *** A0A072V216_MEDTR)","protein_coding"
"Solyc12g096090","No alias","Solanum lycopersicum","Cadmium induced protein AS8 (AHRD V3.3 *** A9PH05_POPTR)","protein_coding"
"Solyc12g098380","No alias","Solanum lycopersicum","zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 *-* AT4G13630.2)","protein_coding"
"Solyc12g100140","No alias","Solanum lycopersicum","Basic helix-loop-helix (BHLH) DNA-binding superfamily (AHRD V3.3 *-* A0A0K9PC85_ZOSMR)","protein_coding"
"Sopen01g029700","No alias","Solanum pennellii","Type I 3-dehydroquinase","protein_coding"
"Sopen06g035850","No alias","Solanum pennellii","Type I 3-dehydroquinase","protein_coding"
"Sopen10g025960","No alias","Solanum pennellii","Type I 3-dehydroquinase","protein_coding"