"sequence_id","alias","species","description","type"
"100233","No alias","Selaginella moellendorffii ","splicing factor PWI domain-containing protein","protein_coding"
"107569","No alias","Selaginella moellendorffii ","Transducin family protein / WD-40 repeat family protein","protein_coding"
"110038","No alias","Selaginella moellendorffii ","DNA polymerase alpha 2","protein_coding"
"113277","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"113369","No alias","Selaginella moellendorffii ","SUMO activating enzyme 1B","protein_coding"
"118632","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"121384","No alias","Selaginella moellendorffii ","ADC synthase superfamily protein","protein_coding"
"121498","No alias","Selaginella moellendorffii ","magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases","protein_coding"
"126754","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"132845","No alias","Selaginella moellendorffii ","phospholipid/glycerol acyltransferase family protein","protein_coding"
"133091","No alias","Selaginella moellendorffii ","WD-40 repeat family protein / notchless protein, putative","protein_coding"
"134300","No alias","Selaginella moellendorffii ","phosphate deficiency response 2","protein_coding"
"140315","No alias","Selaginella moellendorffii ","Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)","protein_coding"
"140678","No alias","Selaginella moellendorffii ","seed imbibition 2","protein_coding"
"142036","No alias","Selaginella moellendorffii ","AAA-type ATPase family protein","protein_coding"
"143204","No alias","Selaginella moellendorffii ","tRNA synthetase beta subunit family protein","protein_coding"
"145760","No alias","Selaginella moellendorffii ","Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein","protein_coding"
"146742","No alias","Selaginella moellendorffii ","regulatory particle triple-A 1A","protein_coding"
"148115","No alias","Selaginella moellendorffii ","RNA binding;RNA binding","protein_coding"
"153030","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"158694","No alias","Selaginella moellendorffii ","TCP-1/cpn60 chaperonin family protein","protein_coding"
"158880","No alias","Selaginella moellendorffii ","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"164431","No alias","Selaginella moellendorffii ","plastid transcriptionally active 3","protein_coding"
"166436","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF3506)","protein_coding"
"166499","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"17035","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"175826","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF3506)","protein_coding"
"178526","No alias","Selaginella moellendorffii ","translocon at the outer envelope membrane of chloroplasts 34","protein_coding"
"180340","No alias","Selaginella moellendorffii ","ankyrin repeat-containing protein 2","protein_coding"
"232271","No alias","Selaginella moellendorffii ","O-acetylserine (thiol) lyase isoform C","protein_coding"
"233298","No alias","Selaginella moellendorffii ","adenine nucleotide transporter 1","protein_coding"
"233833","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"235127","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"23867","No alias","Selaginella moellendorffii ","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"266749","No alias","Selaginella moellendorffii ","zinc knuckle (CCHC-type) family protein","protein_coding"
"266988","No alias","Selaginella moellendorffii ","actin-related protein 4","protein_coding"
"267271","No alias","Selaginella moellendorffii ","multidrug resistance-associated protein 5","protein_coding"
"271276","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"31531","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF3414)","protein_coding"
"404377","No alias","Selaginella moellendorffii ","TOPLESS-related 1","protein_coding"
"412197","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"413898","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415294","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417213","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419387","No alias","Selaginella moellendorffii ","Serine carboxypeptidase S28 family protein","protein_coding"
"428663","No alias","Selaginella moellendorffii ","lysyl-tRNA synthetase 1","protein_coding"
"430101","No alias","Selaginella moellendorffii ","multiple chloroplast division site 1","protein_coding"
"437336","No alias","Selaginella moellendorffii ","HEAT/U-box domain-containing protein","protein_coding"
"437404","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"438493","No alias","Selaginella moellendorffii ","ARM repeat superfamily protein","protein_coding"
"438644","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"438774","No alias","Selaginella moellendorffii ","CD2-binding protein-related","protein_coding"
"438842","No alias","Selaginella moellendorffii ","Cytochrome c","protein_coding"
"440240","No alias","Selaginella moellendorffii ","Peptidase M1 family protein","protein_coding"
"440808","No alias","Selaginella moellendorffii ","Ankyrin repeat family protein","protein_coding"
"443692","No alias","Selaginella moellendorffii ","Alba DNA/RNA-binding protein","protein_coding"
"446868","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"447027","No alias","Selaginella moellendorffii ","Insulinase (Peptidase family M16) family protein","protein_coding"
"53336","No alias","Selaginella moellendorffii ","SLAC1 homologue 3","protein_coding"
"60327","No alias","Selaginella moellendorffii ","structural maintenance of chromosomes 6A","protein_coding"
"70033","No alias","Selaginella moellendorffii ","phospholipases;galactolipases","protein_coding"
"73834","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"74909","No alias","Selaginella moellendorffii ","Aldolase-type TIM barrel family protein","protein_coding"
"74913","No alias","Selaginella moellendorffii ","GTP-binding protein-related","protein_coding"
"77425","No alias","Selaginella moellendorffii ","polyribonucleotide nucleotidyltransferase, putative","protein_coding"
"79851","No alias","Selaginella moellendorffii ","Lysyl-tRNA synthetase, class II","protein_coding"
"80271","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"80442","No alias","Selaginella moellendorffii ","aspartate kinase-homoserine dehydrogenase ii","protein_coding"
"81276","No alias","Selaginella moellendorffii ","chloroplast signal recognition particle 54 kDa subunit","protein_coding"
"86090","No alias","Selaginella moellendorffii ","arginine methyltransferase 11","protein_coding"
"89705","No alias","Selaginella moellendorffii ","NAD(P)H dehydrogenase (quinone)s","protein_coding"
"90144","No alias","Selaginella moellendorffii ","poly(ADP-ribose) polymerase 2","protein_coding"
"91982","No alias","Selaginella moellendorffii ","RNAse E/G-like","protein_coding"
"92383","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"92995","No alias","Selaginella moellendorffii ","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"98506","No alias","Selaginella moellendorffii ","Translation initiation factor 2, small GTP-binding protein","protein_coding"
"99561","No alias","Selaginella moellendorffii ","embryo defective 3012","protein_coding"
"99680","No alias","Selaginella moellendorffii ","HSP70-interacting protein 1","protein_coding"
"A4A49_00922","No alias","Nicotiana attenuata","phenylalanine--trna ligase beta subunit, cytoplasmic","protein_coding"
"At1g01090","No alias","Arabidopsis thaliana","Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]","protein_coding"
"At1g01960","No alias","Arabidopsis thaliana","Brefeldin A-inhibited guanine nucleotide-exchange protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC5]","protein_coding"
"At1g11280","No alias","Arabidopsis thaliana","S-locus lectin protein kinase family protein [Source:TAIR;Acc:AT1G11280]","protein_coding"
"At1g11720","No alias","Arabidopsis thaliana","SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]","protein_coding"
"At1g24510","No alias","Arabidopsis thaliana","T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O04450]","protein_coding"
"At1g24706","No alias","Arabidopsis thaliana","THO complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IAT2]","protein_coding"
"At1g27950","No alias","Arabidopsis thaliana","Non-specific lipid transfer protein GPI-anchored 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F7]","protein_coding"
"At1g30440","No alias","Arabidopsis thaliana","BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]","protein_coding"
"At1g30610","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SA76]","protein_coding"
"At1g48310","No alias","Arabidopsis thaliana","chromatin remodeling factor18 [Source:TAIR;Acc:AT1G48310]","protein_coding"
"At1g55320","No alias","Arabidopsis thaliana","AAE18 [Source:UniProtKB/TrEMBL;Acc:A0A178WMT3]","protein_coding"
"At1g55930","No alias","Arabidopsis thaliana","DUF21 domain-containing protein At1g55930, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84R21]","protein_coding"
"At1g61240","No alias","Arabidopsis thaliana","At1g61240 [Source:UniProtKB/TrEMBL;Acc:Q8GYU5]","protein_coding"
"At1g63490","No alias","Arabidopsis thaliana","transcription factor jumonji (jmjC) domain-containing protein [Source:TAIR;Acc:AT1G63490]","protein_coding"
"At1g64790","No alias","Arabidopsis thaliana","Protein ILITYHIA [Source:UniProtKB/Swiss-Prot;Acc:F4I893]","protein_coding"
"At1g65950","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4ID59]","protein_coding"
"At1g66510","No alias","Arabidopsis thaliana","AAR2 protein family [Source:UniProtKB/TrEMBL;Acc:Q9C711]","protein_coding"
"At1g72320","No alias","Arabidopsis thaliana","Pumilio homolog 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C552]","protein_coding"
"At1g72550","No alias","Arabidopsis thaliana","Phenylalanine--tRNA ligase beta subunit, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9SGE9]","protein_coding"
"At1g74380","No alias","Arabidopsis thaliana","Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]","protein_coding"
"At1g77300","No alias","Arabidopsis thaliana","histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) [Source:TAIR;Acc:AT1G77300]","protein_coding"
"At1g80410","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-containing protein [Source:UniProtKB/TrEMBL;Acc:F4HS68]","protein_coding"
"At2g03270","No alias","Arabidopsis thaliana","DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:O81047]","protein_coding"
"At2g06990","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVW2]","protein_coding"
"At2g17820","No alias","Arabidopsis thaliana","Histidine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXL4]","protein_coding"
"At2g21150","No alias","Arabidopsis thaliana","Protein XAP5 CIRCADIAN TIMEKEEPER [Source:UniProtKB/Swiss-Prot;Acc:Q8H110]","protein_coding"
"At2g27040","No alias","Arabidopsis thaliana","Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]","protein_coding"
"At2g29080","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84WU8]","protein_coding"
"At2g38770","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L5Y4]","protein_coding"
"At2g45730","No alias","Arabidopsis thaliana","tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 [Source:UniProtKB/TrEMBL;Acc:O80846]","protein_coding"
"At3g02090","No alias","Arabidopsis thaliana","Insulinase (Peptidase family M16) protein [Source:TAIR;Acc:AT3G02090]","protein_coding"
"At3g07130","No alias","Arabidopsis thaliana","Purple acid phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLI7]","protein_coding"
"At3g10380","No alias","Arabidopsis thaliana","SEC8 [Source:UniProtKB/TrEMBL;Acc:A0A178VA38]","protein_coding"
"At3g12020","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8L2]","protein_coding"
"At3g13682","No alias","Arabidopsis thaliana","Lysine-specific histone demethylase 1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LID0]","protein_coding"
"At3g16010","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At3g16010 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW84]","protein_coding"
"At3g18790","No alias","Arabidopsis thaliana","AT3G18790 protein [Source:UniProtKB/TrEMBL;Acc:Q9LS97]","protein_coding"
"At3g24080","No alias","Arabidopsis thaliana","KRR1 family protein [Source:UniProtKB/TrEMBL;Acc:F4J5D3]","protein_coding"
"At3g26400","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 4B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIN5]","protein_coding"
"At3g43590","No alias","Arabidopsis thaliana","Zinc knuckle (CCHC-type) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FYD1]","protein_coding"
"At3g49650","No alias","Arabidopsis thaliana","Kinesin-like protein KIN-8B [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ4]","protein_coding"
"At3g50590","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]","protein_coding"
"At3g57290","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/TrEMBL;Acc:A0A178VL03]","protein_coding"
"At3g57570","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J3F3]","protein_coding"
"At4g00800","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4JHM9]","protein_coding"
"At4g02820","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SY07]","protein_coding"
"At4g14510","No alias","Arabidopsis thaliana","CRM-domain containing factor CFM3B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVH1]","protein_coding"
"At4g16310","No alias","Arabidopsis thaliana","Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]","protein_coding"
"At4g19710","No alias","Arabidopsis thaliana","Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81852]","protein_coding"
"At4g21060","No alias","Arabidopsis thaliana","Galactosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JIK9]","protein_coding"
"At4g29020","No alias","Arabidopsis thaliana","Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9SZD2]","protein_coding"
"At4g30160","No alias","Arabidopsis thaliana","villin 4 [Source:TAIR;Acc:AT4G30160]","protein_coding"
"At4g38200","No alias","Arabidopsis thaliana","Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]","protein_coding"
"At5g03260","No alias","Arabidopsis thaliana","Laccase-11 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZA1]","protein_coding"
"At5g08110","No alias","Arabidopsis thaliana","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases [Source:TAIR;Acc:AT5G08110]","protein_coding"
"At5g13870","No alias","Arabidopsis thaliana","Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]","protein_coding"
"At5g16300","No alias","Arabidopsis thaliana","Low density lipoprotein B-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FFF3]","protein_coding"
"At5g25100","No alias","Arabidopsis thaliana","Transmembrane 9 superfamily member [Source:UniProtKB/TrEMBL;Acc:F4KIM7]","protein_coding"
"At5g35180","No alias","Arabidopsis thaliana","Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]","protein_coding"
"At5g38880","No alias","Arabidopsis thaliana","AUGMIN subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMB4]","protein_coding"
"At5g40520","No alias","Arabidopsis thaliana","unknown protein; Has 3679 Blast hits to 2474 proteins in 390 species: Archae - 10; Bacteria - 571; Metazoa - 1012; Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes - 1270 (source: NCBI BLink). [Source:TAIR;Acc:AT5G40520]","protein_coding"
"At5g43900","No alias","Arabidopsis thaliana","Myosin 2 [Source:UniProtKB/TrEMBL;Acc:F4K7C5]","protein_coding"
"At5g45430","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H0X4]","protein_coding"
"At5g45560","No alias","Arabidopsis thaliana","Protein ENHANCED DISEASE RESISTANCE 2-like [Source:UniProtKB/Swiss-Prot;Acc:Q8VZF6]","protein_coding"
"At5g46070","No alias","Arabidopsis thaliana","Guanylate-binding family protein [Source:UniProtKB/TrEMBL;Acc:F4KG14]","protein_coding"
"At5g47880","No alias","Arabidopsis thaliana","ERF1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFY7]","protein_coding"
"At5g50340","No alias","Arabidopsis thaliana","ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases [Source:TAIR;Acc:AT5G50340]","protein_coding"
"At5g51200","No alias","Arabidopsis thaliana","Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT5G51200]","protein_coding"
"At5g65460","No alias","Arabidopsis thaliana","kinesin like protein for actin based chloroplast movement 2 [Source:TAIR;Acc:AT5G65460]","protein_coding"
"Bradi1g11110","No alias","Brachypodium distachyon","translocon at the outer membrane of chloroplasts 64-III","protein_coding"
"Bradi1g12920","No alias","Brachypodium distachyon","sec7 domain-containing protein","protein_coding"
"Bradi1g18790","No alias","Brachypodium distachyon","ubiquitin-specific protease 24","protein_coding"
"Bradi1g26700","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g43350","No alias","Brachypodium distachyon","D6 protein kinase like 2","protein_coding"
"Bradi1g48010","No alias","Brachypodium distachyon","regulatory particle triple-A ATPase 5A","protein_coding"
"Bradi1g51430","No alias","Brachypodium distachyon","Transcription factor GTE6","protein_coding"
"Bradi1g53920","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 3E","protein_coding"
"Bradi1g61380","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g62330","No alias","Brachypodium distachyon","GTP-binding family protein","protein_coding"
"Bradi1g62480","No alias","Brachypodium distachyon","Nucleoporin interacting component (Nup93/Nic96-like) family protein","protein_coding"
"Bradi1g71340","No alias","Brachypodium distachyon","Proteasome component (PCI) domain protein","protein_coding"
"Bradi1g75530","No alias","Brachypodium distachyon","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding"
"Bradi1g76407","No alias","Brachypodium distachyon","adenosine kinase","protein_coding"
"Bradi1g76520","No alias","Brachypodium distachyon","Ribophorin I","protein_coding"
"Bradi1g76860","No alias","Brachypodium distachyon","D111/G-patch domain-containing protein","protein_coding"
"Bradi2g05460","No alias","Brachypodium distachyon","glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative","protein_coding"
"Bradi2g08390","No alias","Brachypodium distachyon","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding"
"Bradi2g22097","No alias","Brachypodium distachyon","Cyclin family protein","protein_coding"
"Bradi2g45817","No alias","Brachypodium distachyon","Kinase-related protein of unknown function (DUF1296)","protein_coding"
"Bradi2g53530","No alias","Brachypodium distachyon","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Bradi2g61370","No alias","Brachypodium distachyon","MUTL-homologue 1","protein_coding"
"Bradi3g00290","No alias","Brachypodium distachyon","translation initiation factor 3 (IF-3) family protein","protein_coding"
"Bradi3g01370","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g02540","No alias","Brachypodium distachyon","RNA-binding KH domain-containing protein","protein_coding"
"Bradi3g03140","No alias","Brachypodium distachyon","DNA polymerase V family","protein_coding"
"Bradi3g12030","No alias","Brachypodium distachyon","Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding"
"Bradi3g12990","No alias","Brachypodium distachyon","sequence-specific DNA binding transcription factors;DNA binding;DNA binding","protein_coding"
"Bradi3g13000","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g19400","No alias","Brachypodium distachyon","SIN-like family protein","protein_coding"
"Bradi3g33600","No alias","Brachypodium distachyon","RNA-binding KH domain-containing protein","protein_coding"
"Bradi3g41550","No alias","Brachypodium distachyon","glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding"
"Bradi3g42750","No alias","Brachypodium distachyon","cyclophilin71","protein_coding"
"Bradi3g43050","No alias","Brachypodium distachyon","nuclear RNA polymerase C1","protein_coding"
"Bradi3g53420","No alias","Brachypodium distachyon","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Bradi3g54980","No alias","Brachypodium distachyon","Trimeric LpxA-like enzyme","protein_coding"
"Bradi3g56780","No alias","Brachypodium distachyon","general control non-repressible 3","protein_coding"
"Bradi3g57040","No alias","Brachypodium distachyon","Eukaryotic aspartyl protease family protein","protein_coding"
"Bradi3g57290","No alias","Brachypodium distachyon","replication protein A 1A","protein_coding"
"Bradi3g57868","No alias","Brachypodium distachyon","YbaK/aminoacyl-tRNA synthetase-associated domain","protein_coding"
"Bradi3g58130","No alias","Brachypodium distachyon","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding"
"Bradi3g59400","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g59542","No alias","Brachypodium distachyon","DegP protease 9","protein_coding"
"Bradi4g03114","No alias","Brachypodium distachyon","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"Bradi4g05570","No alias","Brachypodium distachyon","Nucleotidylyl transferase superfamily protein","protein_coding"
"Bradi4g06310","No alias","Brachypodium distachyon","tRNA synthetase beta subunit family protein","protein_coding"
"Bradi4g07760","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19100","No alias","Brachypodium distachyon","GPI transamidase component Gpi16 subunit family protein","protein_coding"
"Bradi4g28500","No alias","Brachypodium distachyon","SecY protein transport family protein","protein_coding"
"Bradi4g40790","No alias","Brachypodium distachyon","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Bradi4g43130","No alias","Brachypodium distachyon","2-isopropylmalate synthase 1","protein_coding"
"Bradi5g01317","No alias","Brachypodium distachyon","evolutionarily conserved C-terminal region 5","protein_coding"
"Bradi5g02340","No alias","Brachypodium distachyon","Proteasome component (PCI) domain protein","protein_coding"
"Bradi5g05060","No alias","Brachypodium distachyon","DnaJ / Sec63 Brl domains-containing protein","protein_coding"
"Bradi5g12820","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi5g14687","No alias","Brachypodium distachyon","MIF4G domain-containing protein / MA3 domain-containing protein","protein_coding"
"Bradi5g22117","No alias","Brachypodium distachyon","nucleolin like 2","protein_coding"
"Bradi5g24470","No alias","Brachypodium distachyon","COP9 signalosome 5A","protein_coding"
"Brara.A00018.1","No alias","Brassica rapa","tRNA dihydrouridine synthase","protein_coding"
"Brara.A00229.1","No alias","Brassica rapa","regulatory protein *(SBA) of mitochondrial nucleoid organization","protein_coding"
"Brara.A00416.1","No alias","Brassica rapa","night-time repressor *(COR27)","protein_coding"
"Brara.A00580.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01184.1","No alias","Brassica rapa","component *(APC4) of (APC/C)-dependent ubiquitination platform subcomplex","protein_coding"
"Brara.A02572.1","No alias","Brassica rapa","component *(mS76) of small mitoribosomal-subunit proteome & component *(mS78/mS79) of small mitoribosomal-subunit proteome","protein_coding"
"Brara.A02738.1","No alias","Brassica rapa","GABA pyruvate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Brara.A02935.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03628.1","No alias","Brassica rapa","regulatory GTPase (NUG1/NSN1) of LSU processome","protein_coding"
"Brara.B00312.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00620.1","No alias","Brassica rapa","SSU processome assembly factor *(IMP3)","protein_coding"
"Brara.B00686.1","No alias","Brassica rapa","regulatory protein *(SBA) of mitochondrial nucleoid organization","protein_coding"
"Brara.B00841.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.B00842.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00894.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01570.1","No alias","Brassica rapa","regulatory protein of poly(A) RNA polymerase activity","protein_coding"
"Brara.B01912.1","No alias","Brassica rapa","MAPKKK-kinase protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B02782.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.B03060.1","No alias","Brassica rapa","pre-rRNA cleavage factor involved in ITS1 rRNA removal *(SLX9/SAHY)","protein_coding"
"Brara.B03468.1","No alias","Brassica rapa","histone methylase *(PRMT4)","protein_coding"
"Brara.B03814.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03904.1","No alias","Brassica rapa","endoribonuclease *(MNU)","protein_coding"
"Brara.C00338.1","No alias","Brassica rapa","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.C01254.1","No alias","Brassica rapa","pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C01869.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03437.1","No alias","Brassica rapa","scaffold component *(Nop56) of snoRNP rRNA methylation complex","protein_coding"
"Brara.C03640.1","No alias","Brassica rapa","S-adenosyl methionine synthetase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Brara.C04220.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00229.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00882.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01611.1","No alias","Brassica rapa","component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Brara.E00463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00477.1","No alias","Brassica rapa","translation elongation factor *(EF-G)","protein_coding"
"Brara.E01715.1","No alias","Brassica rapa","regulatory protein *(NCL) of rRNA transcription","protein_coding"
"Brara.E01856.1","No alias","Brassica rapa","DNA translocase component *(FANCM) of FANCM-MHF DNA remodeling complex","protein_coding"
"Brara.E02338.1","No alias","Brassica rapa","ssDNA-binding protein *(SSB)","protein_coding"
"Brara.E02396.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02790.1","No alias","Brassica rapa","pre-40S ribosomal-subunit proteome nuclear export factor *(Dim2)","protein_coding"
"Brara.E02860.1","No alias","Brassica rapa","ribosomal protein arginine N-methyltransferase *(PRMT3)","protein_coding"
"Brara.E03248.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03288.1","No alias","Brassica rapa","proton","protein_coding"
"Brara.F00386.1","No alias","Brassica rapa","regulatory protein *(NCL) of rRNA transcription","protein_coding"
"Brara.F01803.1","No alias","Brassica rapa","RING-H2-class BTL-subclass E3 ubiquitin ligase","protein_coding"
"Brara.F02050.1","No alias","Brassica rapa","membrane-anchored lectin chaperone *(CNX)","protein_coding"
"Brara.F02676.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03274.1","No alias","Brassica rapa","component *(TRM11) of TRM11-TRM112 tRNA guanosine-methyltransferase complex","protein_coding"
"Brara.F03751.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.F03753.1","No alias","Brassica rapa","component *(eIF3d) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Brara.F03762.1","No alias","Brassica rapa","C2H2 subclass IDD transcription factor","protein_coding"
"Brara.G00335.1","No alias","Brassica rapa","LRR-XIV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G02623.1","No alias","Brassica rapa","component *(CSL4) of exosome EXO9 core complex","protein_coding"
"Brara.G03718.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.H01148.1","No alias","Brassica rapa","regulatory component of isocitrate dehydrogenase heterodimer & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.H01373.1","No alias","Brassica rapa","arginine methyltransferase *(PRMT5/CAU1) & histone methylase *(CAU1/PRMT5)","protein_coding"
"Brara.H01473.1","No alias","Brassica rapa","arginine methyltransferase *(PRMT5/CAU1) & histone methylase *(CAU1/PRMT5)","protein_coding"
"Brara.H02022.1","No alias","Brassica rapa","BBX class-II transcription factor","protein_coding"
"Brara.I01840.1","No alias","Brassica rapa","beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.I02573.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03669.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.I04170.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00055.1","No alias","Brassica rapa","A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.J00614.1","No alias","Brassica rapa","assembly chaperone (CBP3/UQCC1) of cytochrome c reductase complex","protein_coding"
"Brara.J00650.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00971.1","No alias","Brassica rapa","nucleotide exchange factor *(MGE)","protein_coding"
"Brara.J01612.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.J01613.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.J01916.1","No alias","Brassica rapa","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"Brara.J02411.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.J02414.1","No alias","Brassica rapa","pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.J02725.1","No alias","Brassica rapa","pre-60S ribosomal subunit assembly factor *(NOP15)","protein_coding"
"Brara.K00114.1","No alias","Brassica rapa","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding"
"Brara.K00282.1","No alias","Brassica rapa","DNA bending architectural protein *(HMG-B)","protein_coding"
"Brara.K01439.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g000150","No alias","Chlamydomonas reinhardtii","zinc transporter 7 precursor","protein_coding"
"Cre01.g016150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g021050","No alias","Chlamydomonas reinhardtii","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein","protein_coding"
"Cre01.g029950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g030900","No alias","Chlamydomonas reinhardtii","acyl-activating enzyme 14","protein_coding"
"Cre01.g033400","No alias","Chlamydomonas reinhardtii","Tim10/DDP family zinc finger protein","protein_coding"
"Cre01.g039150","No alias","Chlamydomonas reinhardtii","Uncharacterised conserved protein ycf60","protein_coding"
"Cre02.g107550","No alias","Chlamydomonas reinhardtii","Vacuolar iron transporter (VIT) family protein","protein_coding"
"Cre02.g142352","No alias","Chlamydomonas reinhardtii","Class II aaRS and biotin synthetases superfamily protein","protein_coding"
"Cre02.g143450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g144667","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g145747","No alias","Chlamydomonas reinhardtii","chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative","protein_coding"
"Cre03.g159581","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g171950","No alias","Chlamydomonas reinhardtii","phosphoenolpyruvate carboxylase 4","protein_coding"
"Cre03.g175200","No alias","Chlamydomonas reinhardtii","translocon at the outer envelope membrane of chloroplasts 75-III","protein_coding"
"Cre03.g182500","No alias","Chlamydomonas reinhardtii","SRP72 RNA-binding domain","protein_coding"
"Cre03.g205300","No alias","Chlamydomonas reinhardtii","3\'-5\' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein","protein_coding"
"Cre04.g219300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g222850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g233800","No alias","Chlamydomonas reinhardtii","glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding"
"Cre05.g236150","No alias","Chlamydomonas reinhardtii","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Cre06.g252200","No alias","Chlamydomonas reinhardtii","translocon at the outer envelope membrane of chloroplasts 34","protein_coding"
"Cre06.g265900","No alias","Chlamydomonas reinhardtii","Metal-dependent phosphohydrolase","protein_coding"
"Cre06.g278154","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278167","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278225","No alias","Chlamydomonas reinhardtii","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Cre06.g284050","No alias","Chlamydomonas reinhardtii","YEATS family protein","protein_coding"
"Cre06.g284100","No alias","Chlamydomonas reinhardtii","ammonium transporter 1;3","protein_coding"
"Cre06.g290300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g299650","No alias","Chlamydomonas reinhardtii","CLP protease proteolytic subunit 6","protein_coding"
"Cre06.g300650","No alias","Chlamydomonas reinhardtii","MAK10 homologue","protein_coding"
"Cre07.g326950","No alias","Chlamydomonas reinhardtii","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Cre07.g331500","No alias","Chlamydomonas reinhardtii","ATP-dependent caseinolytic (Clp) protease/crotonase family protein","protein_coding"
"Cre07.g331850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g338250","No alias","Chlamydomonas reinhardtii","YbaK/aminoacyl-tRNA synthetase-associated domain","protein_coding"
"Cre09.g389430","No alias","Chlamydomonas reinhardtii","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding"
"Cre09.g393913","No alias","Chlamydomonas reinhardtii","GTP cyclohydrolase I","protein_coding"
"Cre09.g402950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g433650","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre10.g436050","No alias","Chlamydomonas reinhardtii","Fe superoxide dismutase 1","protein_coding"
"Cre10.g438550","No alias","Chlamydomonas reinhardtii","Bacterial sec-independent translocation protein mttA/Hcf106","protein_coding"
"Cre10.g438650","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre11.g467563","No alias","Chlamydomonas reinhardtii","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Cre12.g500200","No alias","Chlamydomonas reinhardtii","purple acid phosphatase 27","protein_coding"
"Cre12.g500950","No alias","Chlamydomonas reinhardtii","CLP protease P4","protein_coding"
"Cre12.g504150","No alias","Chlamydomonas reinhardtii","NFU domain protein 4","protein_coding"
"Cre12.g507800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g516200","No alias","Chlamydomonas reinhardtii","Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding"
"Cre12.g522626","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g549852","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Cre13.g582201","No alias","Chlamydomonas reinhardtii","nudix hydrolase homolog 24","protein_coding"
"Cre13.g603900","No alias","Chlamydomonas reinhardtii","tRNA synthetase beta subunit family protein","protein_coding"
"Cre14.g614800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g615450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g627850","No alias","Chlamydomonas reinhardtii","Dihydrodipicolinate reductase, bacterial/plant","protein_coding"
"Cre16.g651550","No alias","Chlamydomonas reinhardtii","Mitochondrial transcription termination factor family protein","protein_coding"
"Cre16.g678000","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF3411)","protein_coding"
"Cre16.g683550","No alias","Chlamydomonas reinhardtii","P450 reductase 1","protein_coding"
"Cre16.g683707","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g686400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g722800","No alias","Chlamydomonas reinhardtii","Insulinase (Peptidase family M16) protein","protein_coding"
"Cre17.g739550","No alias","Chlamydomonas reinhardtii","Domain of unknown function (DUF1995)","protein_coding"
"evm.model.contig_2015.10","No alias","Porphyridium purpureum","(at1g56050 : 425.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2019.9","No alias","Porphyridium purpureum","(at1g63660 : 473.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 946.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2020.20","No alias","Porphyridium purpureum","(at1g34120 : 156.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2.; inositol polyphosphate 5-phosphatase I (IP5PI); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2022.13","No alias","Porphyridium purpureum","(at1g10490 : 763.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1726 (InterPro:IPR013562), Domain  of unknown function DUF699, exodeoxyribonuclease V alpha chain (InterPro:IPR007807); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) (TAIR:AT3G57940.1); Has 1351 Blast hits to 1310 proteins in 616 species: Archae - 139; Bacteria - 698; Metazoa - 170; Fungi - 143; Plants - 51; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 1526.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2024.1","No alias","Porphyridium purpureum","(at1g24610 : 94.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (q43088|rbcmt_pea : 91.3) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.2","No alias","Porphyridium purpureum","(at5g26830 : 734.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.28","No alias","Porphyridium purpureum","(at4g39280 : 503.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.6","No alias","Porphyridium purpureum","(at5g42770 : 128.0) Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2033.1","No alias","Porphyridium purpureum","(at3g20000 : 206.0) Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.; translocase of the outer mitochondrial membrane 40 (TOM40); FUNCTIONS IN: voltage-gated anion channel activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plasma membrane, mitochondrial outer membrane translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: Eukaryotic porin family protein (TAIR:AT1G50400.1); Has 530 Blast hits to 530 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2034.16","No alias","Porphyridium purpureum","(at1g69020 : 150.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2039.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2046.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2048.1","No alias","Porphyridium purpureum","(at4g02930 : 543.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (q9mup0|eftu_mesvi : 493.0) Elongation factor Tu (EF-Tu) - Mesostigma viride & (reliability: 1086.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2051.33","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2052.7","No alias","Porphyridium purpureum","(at4g18905 : 218.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G18900.1). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2054.2","No alias","Porphyridium purpureum","(at3g20390 : 118.0) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2056.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.9","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2075.1","No alias","Porphyridium purpureum","(at5g52820 : 508.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93340|gblp_nicpl : 111.0) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2083.4","No alias","Porphyridium purpureum","(at3g21300 : 137.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2084.16","No alias","Porphyridium purpureum","(at2g42810 : 468.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p48490|pp1_phavu : 186.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2085.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2088.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2089.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.13","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2092.4","No alias","Porphyridium purpureum","(at5g03630 : 104.0) ATMDAR2; FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42711|mdars_cucsa : 95.9) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2095.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2097.3","No alias","Porphyridium purpureum","(at1g09620 : 922.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (reliability: 1844.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2106.3","No alias","Porphyridium purpureum","(at5g63630 : 366.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (p46942|db10_nicsy : 164.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2106.4","No alias","Porphyridium purpureum","(at5g05560 : 181.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2110.1","No alias","Porphyridium purpureum","(at5g27470 : 511.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o81983|sys_helan : 497.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2112.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2122.20","No alias","Porphyridium purpureum","(at3g12290 : 350.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2136.4","No alias","Porphyridium purpureum","(at5g64840 : 262.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p56344|cysa_chlvu : 83.2) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2143.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2146.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2149.11","No alias","Porphyridium purpureum","(at2g17440 : 88.2) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2179.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2181.2","No alias","Porphyridium purpureum","(at2g46290 : 281.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2211.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2216.3","No alias","Porphyridium purpureum","(at2g40290 : 269.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2251.1","No alias","Porphyridium purpureum","(at5g55920 : 395.0) Encodes a homolog of the S. cerevisiae Nop2 that is involved in ribosome biogenesis and plays a role on organ size control by promoting cell proliferation and preventing compensation in normal leaf development.; OLIGOCELLULA 2 (OLI2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding; INVOLVED IN: cell proliferation, leaf morphogenesis, root morphogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314), Nop2p (InterPro:IPR011023); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26600.1); Has 62513 Blast hits to 30741 proteins in 2867 species: Archae - 614; Bacteria - 24553; Metazoa - 13287; Fungi - 6403; Plants - 2067; Viruses - 622; Other Eukaryotes - 14967 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2273.2","No alias","Porphyridium purpureum","(at1g27880 : 217.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2273.29","No alias","Porphyridium purpureum","(at3g50530 : 150.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (p53681|crk_dauca : 144.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2276.12","No alias","Porphyridium purpureum","(at3g26570 : 121.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2285.2","No alias","Porphyridium purpureum","(at2g28305 : 84.0) LONELY GUY 1 (LOG1); CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00730 (InterPro:IPR005269); BEST Arabidopsis thaliana protein match is: lysine decarboxylase family protein (TAIR:AT2G37210.1); Has 5303 Blast hits to 5301 proteins in 1556 species: Archae - 26; Bacteria - 3660; Metazoa - 10; Fungi - 132; Plants - 396; Viruses - 0; Other Eukaryotes - 1079 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2288.12","No alias","Porphyridium purpureum","(at1g72550 : 520.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2293.20","No alias","Porphyridium purpureum","(at3g21300 : 313.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2298.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2299.2","No alias","Porphyridium purpureum","(q02073|ch10c_spiol : 112.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (at5g20720 : 110.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2332.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2345.17","No alias","Porphyridium purpureum","(at4g33090 : 100.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2345.2","No alias","Porphyridium purpureum","(at2g35680 : 113.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2345.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2347.9","No alias","Porphyridium purpureum","(at5g63290 : 308.0) Radical SAM superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron-sulfur cluster binding, coproporphyrinogen oxidase activity, catalytic activity; INVOLVED IN: oxidation reduction, porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Putative oxygen-independent coproporphyrinogen III oxidase (InterPro:IPR004559), HemN, C-terminal (InterPro:IPR010723), Radical SAM (InterPro:IPR007197); Has 10146 Blast hits to 10146 proteins in 2456 species: Archae - 113; Bacteria - 8401; Metazoa - 78; Fungi - 4; Plants - 37; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2353.1","No alias","Porphyridium purpureum","(at3g57290 : 410.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2393.2","No alias","Porphyridium purpureum","(at1g74260 : 1230.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2460.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2421.10","No alias","Porphyridium purpureum","(at5g26710 : 526.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (p52780|syq_luplu : 275.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.20","No alias","Porphyridium purpureum","(at1g04170 : 486.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2673.3","No alias","Porphyridium purpureum","(at2g18900 : 111.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT3G26480.1); Has 4620 Blast hits to 3140 proteins in 363 species: Archae - 18; Bacteria - 1955; Metazoa - 712; Fungi - 1091; Plants - 306; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3383.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3390.5","No alias","Porphyridium purpureum","(at3g51800 : 276.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3395.3","No alias","Porphyridium purpureum","(at5g13120 : 202.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (q41651|cypb_vicfa : 187.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3404.10","No alias","Porphyridium purpureum","(at5g10330 : 337.0) Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.; histidinol phosphate aminotransferase 1 (HPA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: HISTIDINE BIOSYNTHESIS 6B (TAIR:AT1G71920.2); Has 35141 Blast hits to 35141 proteins in 2910 species: Archae - 1034; Bacteria - 25652; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (q9few2|his8_nicpl : 333.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3404.17","No alias","Porphyridium purpureum","(at5g45160 : 115.0) Root hair defective 3 GTP-binding protein (RHD3); FUNCTIONS IN: GTP binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT3G13870.1); Has 535 Blast hits to 521 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 186; Plants - 129; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3405.12","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3413.2","No alias","Porphyridium purpureum","(at4g37680 : 119.0) heptahelical transmembrane protein HHP4; heptahelical protein 4 (HHP4); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: stem, fruit, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 5 (TAIR:AT4G38320.1). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3435.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3435.18","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3436.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3442.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3444.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3456.2","No alias","Porphyridium purpureum","(at3g15610 : 270.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3457.1","No alias","Porphyridium purpureum","(at3g04820 : 173.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, TruD (InterPro:IPR001656), Pseudouridine synthase TruD, eukaryotic (InterPro:IPR017091), Pseudouridine synthase, TruD, insertion domain (InterPro:IPR011760); Has 2276 Blast hits to 2198 proteins in 933 species: Archae - 260; Bacteria - 1262; Metazoa - 203; Fungi - 153; Plants - 61; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3462.1","No alias","Porphyridium purpureum","(at5g16750 : 203.0) Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.; TORMOZEMBRYO DEFECTIVE (TOZ); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Small-subunit processome, Utp13 (InterPro:IPR013934), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 153281 Blast hits to 38108 proteins in 953 species: Archae - 96; Bacteria - 13855; Metazoa - 64321; Fungi - 32637; Plants - 21715; Viruses - 0; Other Eukaryotes - 20657 (source: NCBI BLink). & (p93107|pf20_chlre : 97.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3464.1","No alias","Porphyridium purpureum","(at3g03060 : 297.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3468.1","No alias","Porphyridium purpureum","(at5g11500 : 174.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3478.5","No alias","Porphyridium purpureum","(at1g51160 : 100.0) SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: cis-Golgi network; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sybindin-like protein (InterPro:IPR007233), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G02280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3482.3","No alias","Porphyridium purpureum","(at1g09150 : 159.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3487.4","No alias","Porphyridium purpureum","(at1g48490 : 315.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 21758 Blast hits to 20335 proteins in 1211 species: Archae - 24; Bacteria - 4178; Metazoa - 5436; Fungi - 2024; Plants - 6604; Viruses - 27; Other Eukaryotes - 3465 (source: NCBI BLink). & (p15792|kpk1_phavu : 152.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3492.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3494.9","No alias","Porphyridium purpureum","(at2g18220 : 99.0) Noc2p family; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0120 (InterPro:IPR005343); BEST Arabidopsis thaliana protein match is: Noc2p family (TAIR:AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species: Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source: NCBI BLink). & (q8lnu5|noc2l_orysa : 83.2) Nucleolar complex protein 2 homolog (Protein NOC2 homolog) - Oryza sativa (Rice) & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3514.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3524.8","No alias","Porphyridium purpureum","(at2g47990 : 220.0) Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.; SLOW WALKER1 (SWA1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), U3 small nucleolar RNA-associated protein 15, C-terminal (InterPro:IPR018983), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 33528 Blast hits to 20320 proteins in 654 species: Archae - 34; Bacteria - 4945; Metazoa - 12077; Fungi - 7782; Plants - 4404; Viruses - 6; Other Eukaryotes - 4280 (source: NCBI BLink). & (p93340|gblp_nicpl : 81.3) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3542.2","No alias","Porphyridium purpureum","(at1g10130 : 842.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (q6atv4|aca2_orysa : 307.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 1684.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3558.3","No alias","Porphyridium purpureum","(at1g29880 : 539.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (reliability: 1078.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3573.8","No alias","Porphyridium purpureum","(at4g11720 : 107.0) Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain.  HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization.  Predominantly localized to sperm endoplasmic reticulum membranes.  May also reside in other endomembranes, including the plasma membrane.; HAPLESS 2 (HAP2); CONTAINS InterPro DOMAIN/s: Generative cell specific-1, HAP2-GCS1 (InterPro:IPR018928); Has 2122 Blast hits to 1565 proteins in 270 species: Archae - 6; Bacteria - 421; Metazoa - 806; Fungi - 82; Plants - 227; Viruses - 5; Other Eukaryotes - 575 (source: NCBI BLink). & (gnl|cdd|68872 : 92.0) no description available & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3583.2","No alias","Porphyridium purpureum","(at1g11870 : 475.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o81983|sys_helan : 229.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 950.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3583.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3587.7","No alias","Porphyridium purpureum","(at5g55220 : 119.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3592.4","No alias","Porphyridium purpureum","(at1g16340 : 281.0) Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500).; ATKDSA2; FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity; INVOLVED IN: metabolic process, rhamnogalacturonan II biosynthetic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218), Aldolase-type TIM barrel (InterPro:IPR013785), 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79500.4). & (o50044|kdsa_pea : 270.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3601.1","No alias","Porphyridium purpureum","(at4g16310 : 160.0) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (o64411|pao_maize : 83.6) Polyamine oxidase precursor (EC 1.5.3.11) - Zea mays (Maize) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3631.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3631.2","No alias","Porphyridium purpureum","(at5g40770 : 308.0) prohibitin 3; prohibitin 3 (PHB3); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 4 (TAIR:AT3G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3640.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3656.2","No alias","Porphyridium purpureum","(at2g29690 : 465.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3807.1","No alias","Porphyridium purpureum","(at5g24940 : 152.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_431.1","No alias","Porphyridium purpureum","(at5g02250 : 187.0) Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.; EMBRYO DEFECTIVE 2730 (EMB2730); FUNCTIONS IN: ribonuclease activity, 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: chloroplast organization, rRNA processing, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 7586 Blast hits to 7556 proteins in 2301 species: Archae - 41; Bacteria - 5322; Metazoa - 356; Fungi - 403; Plants - 125; Viruses - 2; Other Eukaryotes - 1337 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_437.8","No alias","Porphyridium purpureum","(at5g20160 : 183.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: RNA binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT4G22380.1); Has 572 Blast hits to 572 proteins in 228 species: Archae - 12; Bacteria - 0; Metazoa - 202; Fungi - 143; Plants - 95; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4422.10","No alias","Porphyridium purpureum","(at5g51940 : 110.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4422.9","No alias","Porphyridium purpureum","(at4g26900 : 513.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1026.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4429.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4429.8","No alias","Porphyridium purpureum","(at3g06350 : 256.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4439.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_444.32","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_444.33","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4443.25","No alias","Porphyridium purpureum","(at1g54350 : 331.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4445.4","No alias","Porphyridium purpureum","(at5g43430 : 270.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis.  Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness.  Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4453.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4456.23","No alias","Porphyridium purpureum","(at5g11480 : 104.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis,  YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4464.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4464.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.2","No alias","Porphyridium purpureum","(at3g03960 : 522.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (p54411|tcpe2_avesa : 234.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1044.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4491.14","No alias","Porphyridium purpureum","(p26259|dapa_maize : 119.0) Dihydrodipicolinate synthase, chloroplast precursor (EC 4.2.1.52) (DHDPS) - Zea mays (Maize) & (at2g45440 : 114.0) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.; dihydrodipicolinate synthase (DHDPS2); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase 1 (TAIR:AT3G60880.2); Has 13334 Blast hits to 13334 proteins in 2656 species: Archae - 353; Bacteria - 9459; Metazoa - 101; Fungi - 305; Plants - 96; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4491.4","No alias","Porphyridium purpureum","(at3g45890 : 160.0) Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes.  The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.; ROOT UVB SENSITIVE 1 (RUS1); INVOLVED IN: response to UV-B, developmental process; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: lateral root, root apical meristem, callus, elongation zone, embryonic root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT1G13770.1); Has 458 Blast hits to 456 proteins in 133 species: Archae - 0; Bacteria - 2; Metazoa - 116; Fungi - 71; Plants - 198; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4509.2","No alias","Porphyridium purpureum","(at3g01120 : 171.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_454.15","No alias","Porphyridium purpureum","(at2g37990 : 92.4) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_4594.2","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 150.0) no description available & (at5g17930 : 122.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_464.9","No alias","Porphyridium purpureum","(q2n2k4|phyk_maize : 158.0) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-) - Zea mays (Maize) & (at5g58560 : 155.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_468.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_477.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_479.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_490.4","No alias","Porphyridium purpureum","(at3g07630 : 205.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis.  Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 2 (ADT2); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Amino acid-binding ACT (InterPro:IPR002912), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 1 (TAIR:AT1G11790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_490.5","No alias","Porphyridium purpureum","(at3g08943 : 518.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1770 Blast hits to 1697 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 669; Fungi - 578; Plants - 273; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (reliability: 1036.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_497.4","No alias","Porphyridium purpureum","(at3g57150 : 559.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (reliability: 1118.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.6","No alias","Porphyridium purpureum","(at4g16360 : 132.0) 5'-AMP-activated protein kinase beta-2 subunit protein; FUNCTIONS IN: AMP-activated protein kinase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.1). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_519.1","No alias","Porphyridium purpureum","(at3g58140 : 127.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_531.13","No alias","Porphyridium purpureum","(at2g30350 : 100.0) Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_542.10","No alias","Porphyridium purpureum","(at5g19820 : 684.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1368.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_567.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_595.1","No alias","Porphyridium purpureum","(at5g52470 : 361.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 1 (FIB1); FUNCTIONS IN: snoRNA binding; INVOLVED IN: RNA methylation, rRNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 2 (TAIR:AT4G25630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 722.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_610.2","No alias","Porphyridium purpureum","(at4g20980 : 304.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (gnl|cdd|68872 : 86.2) no description available & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_611.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_611.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_611.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_626.1","No alias","Porphyridium purpureum","(at5g53850 : 199.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_628.4","No alias","Porphyridium purpureum","(at4g13780 : 149.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (q9zts1|sym_orysa : 135.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_630.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_647.2","No alias","Porphyridium purpureum","(at3g03710 : 164.0) Encodes a chloroplast polynucleotide phosphorylase (PNPase).  Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.; resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_682.2","No alias","Porphyridium purpureum","(at1g49540 : 134.0) elongator protein 2 (ELP2); FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_750.2","No alias","Porphyridium purpureum","(at4g10620 : 197.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6ypg5|nos_orysa : 155.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_760.1","No alias","Porphyridium purpureum","(at4g24830 : 345.0) arginosuccinate synthase family; FUNCTIONS IN: argininosuccinate synthase activity, ATP binding; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Argininosuccinate synthase, conserved site (InterPro:IPR018223), Argininosuccinate synthase (InterPro:IPR001518); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_780.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_836.1","No alias","Porphyridium purpureum","(at2g37020 : 114.0) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_856.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.157","No alias","Cyanophora paradoxa","(at5g52820 : 149.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93107|pf20_chlre : 131.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.162","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.56","No alias","Cyanophora paradoxa","(at1g45332 : 306.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, translation elongation factor activity, ATP binding; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 85600 Blast hits to 73226 proteins in 9903 species: Archae - 926; Bacteria - 48433; Metazoa - 8034; Fungi - 6838; Plants - 1636; Viruses - 3; Other Eukaryotes - 19730 (source: NCBI BLink). & (q9fe64|efgm_orysa : 303.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.82","No alias","Cyanophora paradoxa","(at3g12050 : 166.0) Aha1 domain-containing protein; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: response to stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro:IPR013538); Has 501 Blast hits to 499 proteins in 203 species: Archae - 0; Bacteria - 24; Metazoa - 214; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.46","No alias","Cyanophora paradoxa","(at2g31170 : 266.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.47","No alias","Cyanophora paradoxa","(at1g32850 : 411.0) ubiquitin-specific protease 11 (UBP11); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase,  DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1); Has 11311 Blast hits to 7509 proteins in 254 species: Archae - 0; Bacteria - 6; Metazoa - 5825; Fungi - 2000; Plants - 1417; Viruses - 8; Other Eukaryotes - 2055 (source: NCBI BLink). & (reliability: 822.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000215.56","No alias","Cyanophora paradoxa","(at2g27680 : 288.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 12729 Blast hits to 12722 proteins in 1987 species: Archae - 303; Bacteria - 10047; Metazoa - 110; Fungi - 525; Plants - 450; Viruses - 0; Other Eukaryotes - 1294 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000217.39","No alias","Cyanophora paradoxa","(o22567|dxs_orysa : 830.0) Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) - Oryza sativa (Rice) & (at4g15560 : 812.0) Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis; CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink). & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.33","No alias","Cyanophora paradoxa","(q03685|bip5_tobac : 925.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (at5g28540 : 919.0) Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family.  BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.; BIP1; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, ER-associated protein catabolic process, response to heat, polar nucleus fusion; LOCATED IN: cell wall, plasma membrane, chloroplast, vacuole, endoplasmic reticulum lumen; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G42020.1); Has 36391 Blast hits to 35786 proteins in 4820 species: Archae - 162; Bacteria - 17493; Metazoa - 3988; Fungi - 1814; Plants - 1283; Viruses - 341; Other Eukaryotes - 11310 (source: NCBI BLink). & (reliability: 1838.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000317.8","No alias","Cyanophora paradoxa","(at1g17745 : 166.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (q9zri8|fdh_horvu : 115.0) Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) - Hordeum vulgare (Barley) & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000367.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000382.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000382.40","No alias","Cyanophora paradoxa","(at1g79920 : 398.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (q42434|bip_spiol : 214.0) Luminal-binding protein precursor (BiP) (78 kDa glucose-regulated protein homolog) (GRP 78) - Spinacia oleracea (Spinach) & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.25","No alias","Cyanophora paradoxa","(at1g80410 : 567.0) EMBRYO DEFECTIVE 2753 (EMB2753); FUNCTIONS IN: binding; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), N-terminal acetyltransferase A, auxiliary subunit (InterPro:IPR021183), Tetratricopeptide repeat (InterPro:IPR019734). & (reliability: 1134.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000402.37","No alias","Cyanophora paradoxa","(at5g16715 : 948.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (reliability: 1896.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000600.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.49","No alias","Cyanophora paradoxa","(at1g01910 : 353.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000630.10","No alias","Cyanophora paradoxa","(at5g49030 : 987.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (reliability: 1974.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000733.15","No alias","Cyanophora paradoxa","(at1g08600 : 95.9) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 191.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.57","No alias","Cyanophora paradoxa","(at2g22250 : 122.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52894|ala2_horvu : 100.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000852.50","No alias","Cyanophora paradoxa","(p49353|fpps_maize : 352.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Zea mays (Maize) & (at5g47770 : 344.0) Encodes a protein with farnesyl diphosphate synthase activity.; farnesyl diphosphate synthase 1 (FPS1); FUNCTIONS IN: dimethylallyltranstransferase activity, geranyltranstransferase activity; INVOLVED IN: farnesyl diphosphate biosynthetic process, isoprenoid biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 2 (TAIR:AT4G17190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 688.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000863.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001000.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001003.39","No alias","Cyanophora paradoxa","(at1g56590 : 136.0) Involved in vesicle trafficking  between the trans -Golgi network and vacuoles.; ZIG SUPPRESSOR 4 (ZIP4); INVOLVED IN: intracellular protein transport, gravitropism, protein targeting to vacuole; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 1984 Blast hits to 1954 proteins in 323 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 482; Plants - 226; Viruses - 0; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001003.40","No alias","Cyanophora paradoxa","(at1g56590 : 193.0) Involved in vesicle trafficking  between the trans -Golgi network and vacuoles.; ZIG SUPPRESSOR 4 (ZIP4); INVOLVED IN: intracellular protein transport, gravitropism, protein targeting to vacuole; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 1984 Blast hits to 1954 proteins in 323 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 482; Plants - 226; Viruses - 0; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001052.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.8","No alias","Cyanophora paradoxa","(q42836|hem2_horvu : 356.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) - Hordeum vulgare (Barley) & (at1g69740 : 348.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001206.12","No alias","Cyanophora paradoxa","(at5g18070 : 397.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 370.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001264.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001304.8","No alias","Cyanophora paradoxa","(at3g59400 : 81.6) GUN, genomes uncoupled, is necessary for coupling the expression of some  nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and  promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein  that enhances the activity of Mg-chelatase. Although required  for chlorophyll accumulation under normal  growth conditions, GUN4 is not essential  for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001384.1","No alias","Cyanophora paradoxa","(at2g40490 : 334.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (q42967|dcup_tobac : 331.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001388.6","No alias","Cyanophora paradoxa","(o81372|ndk1_mescr : 207.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Mesembryanthemum crystallinum (Common ice plant) & (at4g23895 : 206.0) Pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: UTP biosynthetic process, GTP biosynthetic process, CTP biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Nucleoside diphosphate kinase, core (InterPro:IPR001564), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001600.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020516.18","No alias","Cyanophora paradoxa","(at5g13510 : 86.7) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o80362|rk10_tobac : 85.5) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (reliability: 173.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020564.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.34","No alias","Cyanophora paradoxa","(at1g74770 : 172.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding;zinc ion binding (TAIR:AT1G18910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.4","No alias","Cyanophora paradoxa","(at4g25080 : 236.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020941.47","No alias","Cyanophora paradoxa","(at4g20760 : 103.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020964.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021314.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.48","No alias","Cyanophora paradoxa","(q42967|dcup_tobac : 414.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 407.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021432.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.35","No alias","Cyanophora paradoxa","(at1g72550 : 507.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1014.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.46","No alias","Cyanophora paradoxa","(at3g18290 : 417.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.55","No alias","Cyanophora paradoxa","(at5g03940 : 420.0) mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit; chloroplast signal recognition particle 54 kDa subunit (CPSRP54); FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding, signal sequence binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; LOCATED IN: chloroplast stroma, chloroplast, signal recognition particle, chloroplast targeting, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP (InterPro:IPR004780), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p49969|sr542_horvu : 199.0) Signal recognition particle 54 kDa protein 2 (SRP54) - Hordeum vulgare (Barley) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021612.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.58","No alias","Cyanophora paradoxa","(at4g16660 : 289.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p09189|hsp7c_pethy : 213.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G140200","No alias","Glycine max","arginase","protein_coding"
"Glyma.01G144200","No alias","Glycine max","SEC7-like guanine nucleotide exchange family protein","protein_coding"
"Glyma.01G208100","No alias","Glycine max","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding"
"Glyma.01G215800","No alias","Glycine max","Pleckstrin homology (PH) domain superfamily protein","protein_coding"
"Glyma.01G235200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.02G017400","No alias","Glycine max","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding"
"Glyma.02G020200","No alias","Glycine max","Cystathionine beta-synthase (CBS) protein","protein_coding"
"Glyma.02G029800","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.02G047300","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.02G087700","No alias","Glycine max","Fe superoxide dismutase 2","protein_coding"
"Glyma.02G097600","No alias","Glycine max","protein phosphatase 2A  subunit A2","protein_coding"
"Glyma.02G162000","No alias","Glycine max","WW domain-containing protein","protein_coding"
"Glyma.02G229700","No alias","Glycine max","ubiquitin activating enzyme 2","protein_coding"
"Glyma.02G295800","No alias","Glycine max","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"Glyma.02G304700","No alias","Glycine max","phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)","protein_coding"
"Glyma.03G020900","No alias","Glycine max","HAL3-like protein A","protein_coding"
"Glyma.03G157900","No alias","Glycine max","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Glyma.03G160000","No alias","Glycine max","RNA-binding KH domain-containing protein","protein_coding"
"Glyma.03G166300","No alias","Glycine max","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"Glyma.03G190500","No alias","Glycine max","Enolase","protein_coding"
"Glyma.03G238300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G066800","No alias","Glycine max","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"Glyma.04G182000","No alias","Glycine max","Protein of unknown function (DUF3506)","protein_coding"
"Glyma.04G255700","No alias","Glycine max","U2 snRNP auxilliary factor, large subunit, splicing factor","protein_coding"
"Glyma.05G016400","No alias","Glycine max","tRNA synthetase beta subunit family protein","protein_coding"
"Glyma.05G151100","No alias","Glycine max","aspartate kinase-homoserine dehydrogenase ii","protein_coding"
"Glyma.05G200600","No alias","Glycine max","signal recognition particle-related / SRP-related","protein_coding"
"Glyma.05G225000","No alias","Glycine max","Insulinase (Peptidase family M16) protein","protein_coding"
"Glyma.05G240000","No alias","Glycine max","GLU-ADT subunit B","protein_coding"
"Glyma.05G245100","No alias","Glycine max","eukaryotic translation initiation factor 3C","protein_coding"
"Glyma.05G245900","No alias","Glycine max","WUSCHEL related homeobox 1","protein_coding"
"Glyma.06G001900","No alias","Glycine max","UDP-GLUCOSE PYROPHOSPHORYLASE 1","protein_coding"
"Glyma.06G015400","No alias","Glycine max","Ribophorin I","protein_coding"
"Glyma.06G018800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.06G045000","No alias","Glycine max","ankyrin repeat family protein","protein_coding"
"Glyma.06G066300","No alias","Glycine max","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding"
"Glyma.06G082500","No alias","Glycine max","RNA polymerase I-associated factor PAF67","protein_coding"
"Glyma.06G111000","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.06G133600","No alias","Glycine max","Ubiquitin supergroup;Ribosomal protein L40e","protein_coding"
"Glyma.06G137700","No alias","Glycine max","nascent polypeptide-associated complex subunit alpha-like protein 2","protein_coding"
"Glyma.06G161200","No alias","Glycine max","calcium-dependent protein kinase 4","protein_coding"
"Glyma.07G090800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G102600","No alias","Glycine max","homolog of nucleolar protein NOP56","protein_coding"
"Glyma.08G045500","No alias","Glycine max","ubiquitin fusion degradation 1","protein_coding"
"Glyma.08G156200","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.08G213500","No alias","Glycine max","Mediator complex, subunit Med7","protein_coding"
"Glyma.08G237500","No alias","Glycine max","FTSH protease 12","protein_coding"
"Glyma.08G283100","No alias","Glycine max","anthranilate phosphoribosyltransferase, putative","protein_coding"
"Glyma.08G286200","No alias","Glycine max","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein","protein_coding"
"Glyma.09G120200","No alias","Glycine max","DNA GYRASE A","protein_coding"
"Glyma.10G021800","No alias","Glycine max","DEGP protease 2","protein_coding"
"Glyma.10G031600","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.10G140900","No alias","Glycine max","DEAD box RNA helicase (RH3)","protein_coding"
"Glyma.10G168600","No alias","Glycine max","plastid transcriptionally active 3","protein_coding"
"Glyma.10G178200","No alias","Glycine max","TRICHOME BIREFRINGENCE-LIKE 18","protein_coding"
"Glyma.10G194700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G215300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.10G227800","No alias","Glycine max","plastidic pyruvate kinase beta subunit 1","protein_coding"
"Glyma.10G279300","No alias","Glycine max","ACT domain-containing protein","protein_coding"
"Glyma.11G090900","No alias","Glycine max","RNAse l inhibitor protein 2","protein_coding"
"Glyma.11G102200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G111200","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.11G133600","No alias","Glycine max","Nucleolar GTP-binding protein","protein_coding"
"Glyma.11G186600","No alias","Glycine max","myb-like HTH transcriptional regulator family protein","protein_coding"
"Glyma.11G212300","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding"
"Glyma.12G018400","No alias","Glycine max","methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative","protein_coding"
"Glyma.12G020700","No alias","Glycine max","tRNA synthetase class I (I, L, M and V) family protein","protein_coding"
"Glyma.12G087100","No alias","Glycine max","MAR binding filament-like protein 1","protein_coding"
"Glyma.12G095400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.12G147900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G168800","No alias","Glycine max","DnaJ domain ;Myb-like DNA-binding domain","protein_coding"
"Glyma.13G028400","No alias","Glycine max","Cobalamin-independent synthase family protein","protein_coding"
"Glyma.13G104300","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G109300","No alias","Glycine max","TATA-binding related factor (TRF) of subunit 20 of Mediator complex","protein_coding"
"Glyma.13G155000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G207900","No alias","Glycine max","dehydratase family","protein_coding"
"Glyma.13G359000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G367800","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.14G018700","No alias","Glycine max","trigger factor type chaperone family protein","protein_coding"
"Glyma.14G137100","No alias","Glycine max","DNA topoisomerase, type IA, core","protein_coding"
"Glyma.15G013600","No alias","Glycine max","NUP50 (Nucleoporin 50 kDa) protein","protein_coding"
"Glyma.15G130800","No alias","Glycine max","GTP binding","protein_coding"
"Glyma.15G156500","No alias","Glycine max","plastid transcriptionally active 14","protein_coding"
"Glyma.15G181400","No alias","Glycine max","protein kinase family protein / C-type lectin domain-containing protein","protein_coding"
"Glyma.15G269500","No alias","Glycine max","RNA polymerase Rpb8","protein_coding"
"Glyma.16G029600","No alias","Glycine max","POZ/BTB containin G-protein 1","protein_coding"
"Glyma.16G094900","No alias","Glycine max","x-ray induced transcript 1","protein_coding"
"Glyma.16G134900","No alias","Glycine max","RNA binding;GTP binding","protein_coding"
"Glyma.17G083700","No alias","Glycine max","tRNA synthetase beta subunit family protein","protein_coding"
"Glyma.17G095633","No alias","Glycine max","DDT domain superfamily","protein_coding"
"Glyma.17G112100","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.17G176100","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.18G024800","No alias","Glycine max","Eukaryotic translation initiation factor 2 subunit 1","protein_coding"
"Glyma.18G203800","No alias","Glycine max","metallopeptidase M24 family protein","protein_coding"
"Glyma.18G233700","No alias","Glycine max","SKP1-like 21","protein_coding"
"Glyma.18G240100","No alias","Glycine max","Alpha-1,4-glucan-protein synthase family protein","protein_coding"
"Glyma.19G075600","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding"
"Glyma.19G110800","No alias","Glycine max","evolutionarily conserved C-terminal region 2","protein_coding"
"Glyma.19G146400","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.19G248200","No alias","Glycine max","Chloroplast J-like domain 1","protein_coding"
"Glyma.20G062300","No alias","Glycine max","homolog of yeast ADA2 2B","protein_coding"
"Glyma.20G130800","No alias","Glycine max","Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain","protein_coding"
"Glyma.20G179900","No alias","Glycine max","phosphoglucosamine mutase family protein","protein_coding"
"Glyma.20G181600","No alias","Glycine max","pumilio 4","protein_coding"
"GRMZM2G013283","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G032936","No alias","Zea mays","ABC transporter of the mitochondrion 3","protein_coding"
"GRMZM2G033724","No alias","Zea mays","Trypsin family protein","protein_coding"
"GRMZM2G103113","No alias","Zea mays","proline-rich family protein","protein_coding"
"GRMZM2G107571","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G109009","No alias","Zea mays","nuclear poly(a) polymerase","protein_coding"
"GRMZM2G124096","No alias","Zea mays","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G152319","No alias","Zea mays","TSL-kinase interacting protein 1","protein_coding"
"GRMZM2G161913","No alias","Zea mays","binding","protein_coding"
"GRMZM2G166330","No alias","Zea mays","SGNH hydrolase-type esterase superfamily protein","protein_coding"
"GRMZM2G168096","No alias","Zea mays","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"GRMZM2G334584","No alias","Zea mays","NB-ARC domain-containing disease resistance protein","protein_coding"
"GRMZM2G401062","No alias","Zea mays","SET domain-containing protein","protein_coding"
"GRMZM2G432850","No alias","Zea mays","genomes uncoupled 1","protein_coding"
"GRMZM2G451443","No alias","Zea mays","ARM repeat superfamily protein","protein_coding"
"GRMZM2G455816","No alias","Zea mays","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"GRMZM2G700926","No alias","Zea mays","tRNA synthetase beta subunit family protein","protein_coding"
"GRMZM2G703050","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G810649","No alias","Zea mays","Function unknown","protein_coding"
"HORVU0Hr1G006640.1","No alias","Hordeum vulgare","component *(SMU1) of SMU splicing factor complex","protein_coding"
"HORVU0Hr1G021850.2","No alias","Hordeum vulgare","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"HORVU0Hr1G038620.1","No alias","Hordeum vulgare","component *(KU80) of Ku70-Ku80 helicase complex","protein_coding"
"HORVU1Hr1G009900.2","No alias","Hordeum vulgare","scaffold nucleoporin of nuclear pore complex *(NUP107)","protein_coding"
"HORVU1Hr1G015270.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G023480.6","No alias","Hordeum vulgare","E3 ubiquitin ligase *(UPL6)","protein_coding"
"HORVU1Hr1G047690.1","No alias","Hordeum vulgare","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding"
"HORVU1Hr1G050920.8","No alias","Hordeum vulgare","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"HORVU1Hr1G055370.1","No alias","Hordeum vulgare","3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU1Hr1G059960.2","No alias","Hordeum vulgare","pre-60S ribosomal-subunit proteome export factor *(ARX1)","protein_coding"
"HORVU1Hr1G062740.3","No alias","Hordeum vulgare","plastidial ribosome biogenesis factor *(PAC)","protein_coding"
"HORVU1Hr1G075000.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G075680.2","No alias","Hordeum vulgare","hexokinase","protein_coding"
"HORVU1Hr1G078030.47","No alias","Hordeum vulgare","TruD-type tRNA pseudouridine synthase","protein_coding"
"HORVU1Hr1G079900.2","No alias","Hordeum vulgare","flap structure-specific endonuclease *(FEN1) & flap structure-specific endonuclease *(FEN1)","protein_coding"
"HORVU1Hr1G080070.1","No alias","Hordeum vulgare","formylglycinamidine RN synthase *(PUR4) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"HORVU1Hr1G083960.3","No alias","Hordeum vulgare","scaffold component *(Nop56) of snoRNP rRNA methylation complex","protein_coding"
"HORVU1Hr1G091730.19","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G000590.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G019570.1","No alias","Hordeum vulgare","tRNA cytidine acetyltransferase adaptor protein","protein_coding"
"HORVU2Hr1G024780.11","No alias","Hordeum vulgare","scaffold component *(MO25) of RAM signalling pathway","protein_coding"
"HORVU2Hr1G030930.2","No alias","Hordeum vulgare","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU2Hr1G034720.4","No alias","Hordeum vulgare","A1-class (Pepsin) protease","protein_coding"
"HORVU2Hr1G040310.1","No alias","Hordeum vulgare","component *(ELP1) of ELONGATOR transcription elongation complex","protein_coding"
"HORVU2Hr1G046660.6","No alias","Hordeum vulgare","CDPK protein kinase & calcium sensor and kinase *(CPK) & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"HORVU2Hr1G050280.2","No alias","Hordeum vulgare","solute transporter *(NAT)","protein_coding"
"HORVU2Hr1G066740.2","No alias","Hordeum vulgare","component *(TRM61) of TRM61-TRM6 tRNA adenosine-methyltransferase complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"HORVU2Hr1G075470.2","No alias","Hordeum vulgare","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G083780.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G093400.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G100720.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G100750.3","No alias","Hordeum vulgare","class-I alpha-mannosidase I & EC_3.2 glycosylase","protein_coding"
"HORVU2Hr1G106380.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G106820.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G012410.6","No alias","Hordeum vulgare","EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase","protein_coding"
"HORVU3Hr1G023970.2","No alias","Hordeum vulgare","glutaredoxin maturation factor (GRXS15) of iron-sulfur cluster assembly machinery","protein_coding"
"HORVU3Hr1G026470.1","No alias","Hordeum vulgare","PP5 phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"HORVU3Hr1G045270.2","No alias","Hordeum vulgare","calcium-permeable channel *(OSCA)","protein_coding"
"HORVU3Hr1G066410.2","No alias","Hordeum vulgare","transcriptional co-activator *(KIWI/KELP) involved in intine formation","protein_coding"
"HORVU3Hr1G066930.1","No alias","Hordeum vulgare","component *(CAF1c/MSI) of CAF1 histone chaperone complex & flowering time factor *(FVE)","protein_coding"
"HORVU3Hr1G093290.1","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(FKBP15-1/2)","protein_coding"
"HORVU3Hr1G110590.2","No alias","Hordeum vulgare","extramitochondrial phosphatidylserine decarboxylase","protein_coding"
"HORVU3Hr1G112690.2","No alias","Hordeum vulgare","regulatory protein *(RLD) of gravity sensing","protein_coding"
"HORVU4Hr1G002980.2","No alias","Hordeum vulgare","F-class RAB GTPase & vesicle tethering small GTPase *(RAB5)","protein_coding"
"HORVU4Hr1G015770.3","No alias","Hordeum vulgare","DLSV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G015880.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G020660.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G027040.2","No alias","Hordeum vulgare","synthase component of pyridoxal 5-phosphate synthase complex","protein_coding"
"HORVU4Hr1G027150.1","No alias","Hordeum vulgare","mitochondrial uncoupling protein *(PUMP) & solute transporter *(MTCC)","protein_coding"
"HORVU4Hr1G028610.1","No alias","Hordeum vulgare","nucleocytoplasmic transport karyopherin *(PLANTKAP)","protein_coding"
"HORVU4Hr1G041810.13","No alias","Hordeum vulgare","scaffold component *(Nop58) of snoRNP rRNA methylation complex","protein_coding"
"HORVU4Hr1G048510.1","No alias","Hordeum vulgare","CDK9 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G050280.1","No alias","Hordeum vulgare","lytic vacuole protein sorting receptor *(VSR)","protein_coding"
"HORVU4Hr1G051720.1","No alias","Hordeum vulgare","channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system","protein_coding"
"HORVU4Hr1G059150.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G061650.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G067650.2","No alias","Hordeum vulgare","EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase","protein_coding"
"HORVU4Hr1G070980.1","No alias","Hordeum vulgare","component *(CSN4) of COP9 signalosome complex","protein_coding"
"HORVU4Hr1G078750.2","No alias","Hordeum vulgare","cysteine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"HORVU4Hr1G078920.13","No alias","Hordeum vulgare","meiotic crossover accessory protein *(FLIP)","protein_coding"
"HORVU4Hr1G082690.4","No alias","Hordeum vulgare","exoribonuclease *(RRP44a)","protein_coding"
"HORVU4Hr1G087200.11","No alias","Hordeum vulgare","meiotic double strand break initiation accessory protein *(PRD3/PAIR1)","protein_coding"
"HORVU4Hr1G089820.7","No alias","Hordeum vulgare","component *(THOC1/HPR1) of mRNP trafficking THO subcomplex","protein_coding"
"HORVU5Hr1G000150.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G000700.6","No alias","Hordeum vulgare","beta-1,6-glucuronosyltransferase *(GlcAT14)","protein_coding"
"HORVU5Hr1G019030.9","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group & pyrophosphate-dependent phosphofructokinase","protein_coding"
"HORVU5Hr1G022530.2","No alias","Hordeum vulgare","preprotein processing peptidase *(ICP55) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU5Hr1G024500.6","No alias","Hordeum vulgare","phosphodiesterase *(PIG-O)","protein_coding"
"HORVU5Hr1G027730.2","No alias","Hordeum vulgare","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"HORVU5Hr1G031470.8","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G043190.2","No alias","Hordeum vulgare","2-isopropylmalate synthase *(IPMS) & EC_2.3 acyltransferase","protein_coding"
"HORVU5Hr1G056950.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G058870.2","No alias","Hordeum vulgare","NAK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G060920.5","No alias","Hordeum vulgare","ubiquitin-proteasome shuttle factor *(RAD23)","protein_coding"
"HORVU5Hr1G061970.11","No alias","Hordeum vulgare","subunit alpha of phenylalanine-tRNA ligase complex & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"HORVU5Hr1G073330.1","No alias","Hordeum vulgare","histone demethylase *(PKDM12)","protein_coding"
"HORVU5Hr1G074920.10","No alias","Hordeum vulgare","component *(bS16m) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU5Hr1G092180.1","No alias","Hordeum vulgare","nucleoporin of nuclear pore complex *(GP210)","protein_coding"
"HORVU5Hr1G104390.2","No alias","Hordeum vulgare","methylation reader *(ECT)","protein_coding"
"HORVU5Hr1G117610.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G123080.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G001680.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G013230.3","No alias","Hordeum vulgare","component *(uL4m) of large mitoribosomal-subunit proteome","protein_coding"
"HORVU6Hr1G020420.1","No alias","Hordeum vulgare","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"HORVU6Hr1G027570.6","No alias","Hordeum vulgare","component *(RRP45) of exosome EXO9 core complex","protein_coding"
"HORVU6Hr1G029880.18","No alias","Hordeum vulgare","component *(NRPC2) of RNA polymerase III complex","protein_coding"
"HORVU6Hr1G036640.14","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G051930.3","No alias","Hordeum vulgare","histone chaperone *(NRP)","protein_coding"
"HORVU6Hr1G053890.9","No alias","Hordeum vulgare","component *(NOC1) of ribosomal-subunit proteome nuclear export complex","protein_coding"
"HORVU6Hr1G055520.3","No alias","Hordeum vulgare","beta-L-arabinopyranosidase *(APSE)","protein_coding"
"HORVU6Hr1G071790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G072910.3","No alias","Hordeum vulgare","A1-class (Pepsin) protease & aspartyl protease (APCB) of BAG6-dependent plant immunity","protein_coding"
"HORVU6Hr1G075720.4","No alias","Hordeum vulgare","scaffold component *(CUL3) of CUL3-BTB E3 ligase complexes","protein_coding"
"HORVU6Hr1G080480.1","No alias","Hordeum vulgare","solute transporter *(MTCC)","protein_coding"
"HORVU6Hr1G085560.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G087300.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G090260.1","No alias","Hordeum vulgare","glutathione-dependent formaldehyde dehydrogenase *(FALDH) & S-nitrosoglutathione reductase *(GSNOR)","protein_coding"
"HORVU6Hr1G093510.1","No alias","Hordeum vulgare","component *(SF3B2) of splicing factor 3B complex","protein_coding"
"HORVU7Hr1G008880.2","No alias","Hordeum vulgare","RNA editing factor *(MORF)","protein_coding"
"HORVU7Hr1G017730.1","No alias","Hordeum vulgare","Kinesin-U-type motor protein","protein_coding"
"HORVU7Hr1G026860.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G035870.4","No alias","Hordeum vulgare","assembly factor involved in RuBisCo assembly *(RbcX)","protein_coding"
"HORVU7Hr1G039760.2","No alias","Hordeum vulgare","U-Box-group-II E3 ubiquitin ligase","protein_coding"
"HORVU7Hr1G045770.7","No alias","Hordeum vulgare","microtubule-associated protein *(MAP65-2)","protein_coding"
"HORVU7Hr1G054380.1","No alias","Hordeum vulgare","EC_5.4 intramolecular transferase & glutamate-1-semialdehyde-2,1-aminomutase *(GSA)","protein_coding"
"HORVU7Hr1G054920.1","No alias","Hordeum vulgare","component *(Tim8) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"HORVU7Hr1G059460.4","No alias","Hordeum vulgare","dihydroxy-acid dehydratase & dihydroxy-acid dehydratase & EC_4.2 carbon-oxygen lyase","protein_coding"
"HORVU7Hr1G063030.9","No alias","Hordeum vulgare","endoribonuclease *(RNase E)","protein_coding"
"HORVU7Hr1G065990.6","No alias","Hordeum vulgare","regulatory protein *(GluTRBP) of glutamyl-tRNA reductase activity","protein_coding"
"HORVU7Hr1G071470.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G083070.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G088250.1","No alias","Hordeum vulgare","proton","protein_coding"
"HORVU7Hr1G118230.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00001_0300","kfl00001_0300_v1.1","Klebsormidium nitens","(at2g34660 : 1442.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 132.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2884.0) &  (original description: no original description)","protein_coding"
"Kfl00001_0840","kfl00001_0840_v1.1","Klebsormidium nitens","(at4g16130 : 993.0) Similar to galactokinase.; arabinose kinase (ARA1); FUNCTIONS IN: L-arabinokinase activity, ATP binding, galactokinase activity; INVOLVED IN: arabinose metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Galactokinase, glycosyltransferase (InterPro:IPR012369), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Mevalonate/galactokinase family protein (TAIR:AT3G42850.1); Has 3503 Blast hits to 3497 proteins in 1405 species: Archae - 74; Bacteria - 2553; Metazoa - 183; Fungi - 124; Plants - 132; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink). & (reliability: 1986.0) &  (original description: no original description)","protein_coding"
"Kfl00003_0300","kfl00003_0300_v1.1","Klebsormidium nitens","(at3g57050 : 540.0) Encodes second enzyme in the methionine biosynthetic pathway; cystathionine beta-lyase (CBL); FUNCTIONS IN: cystathionine beta-lyase activity; INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Cystathionine beta-lyase, eukaryotic (InterPro:IPR006238), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G01120.1); Has 20092 Blast hits to 20089 proteins in 2449 species: Archae - 218; Bacteria - 12272; Metazoa - 204; Fungi - 782; Plants - 267; Viruses - 1; Other Eukaryotes - 6348 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"Kfl00006_0870","kfl00006_0870_v1.1","Klebsormidium nitens","(at4g03200 : 879.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF255 (InterPro:IPR004879), Six-hairpin glycosidase-like (InterPro:IPR008928), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1758.0) &  (original description: no original description)","protein_coding"
"Kfl00014_0520","kfl00014_0520_v1.1","Klebsormidium nitens","(at1g73240 : 139.0) CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00016_0280","kfl00016_0280_v1.1","Klebsormidium nitens","(at5g06120 : 1458.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1). & (reliability: 2916.0) &  (original description: no original description)","protein_coding"
"Kfl00017_0430","kfl00017_0430_v1.1","Klebsormidium nitens","(at3g58690 : 212.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54820.1); Has 119556 Blast hits to 118228 proteins in 3954 species: Archae - 119; Bacteria - 14059; Metazoa - 43160; Fungi - 10190; Plants - 33928; Viruses - 396; Other Eukaryotes - 17704 (source: NCBI BLink). & (q8lkz1|nork_pea : 174.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00018_0430","kfl00018_0430_v1.1","Klebsormidium nitens","(at2g38020 : 768.0) necessary for proper vacuole formation and morphogenesis in Arabidopsis; VACUOLELESS 1 (VCL1); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vps16, N-terminal (InterPro:IPR006926), Vacuolar protein sorting-associated protein 16 (InterPro:IPR016534), Vps16, C-terminal (InterPro:IPR006925); Has 455 Blast hits to 406 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 1536.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0340","kfl00022_0340_v1.1","Klebsormidium nitens","(at2g01220 : 327.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0380","kfl00022_0380_v1.1","Klebsormidium nitens","(at1g50120 : 254.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0450","kfl00024_0450_v1.1","Klebsormidium nitens","(at5g40480 : 839.0) embryo defective 3012 (EMB3012); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Invasin/intimin cell-adhesion (InterPro:IPR008964), Bacterial Ig-like, group 2 (InterPro:IPR003343); Has 264 Blast hits to 238 proteins in 89 species: Archae - 0; Bacteria - 31; Metazoa - 150; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 1678.0) &  (original description: no original description)","protein_coding"
"Kfl00035_0050","kfl00035_0050_v1.1","Klebsormidium nitens","(at4g02030 : 530.0) Vps51/Vps67 family (components of vesicular transport) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00036_0280","kfl00036_0280_v1.1","Klebsormidium nitens","(at4g36390 : 243.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 241.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"Kfl00041_g2","kfl00041_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00044_0130","kfl00044_0130_v1.1","Klebsormidium nitens","(at3g58800 : 217.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"Kfl00047_0100","kfl00047_0100_v1.1","Klebsormidium nitens","(at4g21150 : 243.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"Kfl00050_0500","kfl00050_0500_v1.1","Klebsormidium nitens","(at4g01320 : 482.0) CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.; ATSTE24; FUNCTIONS IN: endopeptidase activity, metalloendopeptidase activity; INVOLVED IN: CAAX-box protein maturation, proteolysis; LOCATED IN: endoplasmic reticulum, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M48 (InterPro:IPR001915); Has 2991 Blast hits to 2984 proteins in 996 species: Archae - 162; Bacteria - 1572; Metazoa - 206; Fungi - 172; Plants - 49; Viruses - 0; Other Eukaryotes - 830 (source: NCBI BLink). & (reliability: 964.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0040","kfl00060_0040_v1.1","Klebsormidium nitens","(at1g08980 : 241.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro.  This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"Kfl00060_0100","kfl00060_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00061_0100","kfl00061_0100_v1.1","Klebsormidium nitens","(at5g17270 : 343.0) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G37130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0020","kfl00069_0020_v1.1","Klebsormidium nitens","(at2g26930 : 382.0) Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.; 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK); FUNCTIONS IN: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; INVOLVED IN: response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (InterPro:IPR004424), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 6617 Blast hits to 6617 proteins in 2226 species: Archae - 3; Bacteria - 4583; Metazoa - 0; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 1960 (source: NCBI BLink). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"Kfl00076_0200","kfl00076_0200_v1.1","Klebsormidium nitens","(q8w519|mmt1_maize : 895.0) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S-methyltransferase) - Zea mays (Maize) & (at5g49810 : 869.0) Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S  -methylmethionine formation.; methionine S-methyltransferase (MMT); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Methyltransferase small (InterPro:IPR007848), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1738.0) &  (original description: no original description)","protein_coding"
"Kfl00078_0290","kfl00078_0290_v1.1","Klebsormidium nitens","(at4g11420 : 796.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (q40554|if3a_tobac : 781.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1592.0) &  (original description: no original description)","protein_coding"
"Kfl00079_0090","kfl00079_0090_v1.1","Klebsormidium nitens","(at1g72550 : 716.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1432.0) &  (original description: no original description)","protein_coding"
"Kfl00083_0250","kfl00083_0250_v1.1","Klebsormidium nitens","(at5g66680 : 484.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 968.0) &  (original description: no original description)","protein_coding"
"Kfl00093_0040","kfl00093_0040_v1.1","Klebsormidium nitens","(at3g57660 : 885.0) Encodes a subunit of RNA polymerase I (aka RNA polymerase A).; nuclear RNA polymerase A1 (NRPA1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), DNA-directed RNA pol I, largest subunit (InterPro:IPR015699), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 39638 Blast hits to 28014 proteins in 7318 species: Archae - 983; Bacteria - 11101; Metazoa - 5787; Fungi - 2930; Plants - 6395; Viruses - 781; Other Eukaryotes - 11661 (source: NCBI BLink). & (p60288|rpoc1_phypa : 102.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Physcomitrella patens (Moss) & (reliability: 1770.0) &  (original description: no original description)","protein_coding"
"Kfl00109_0040","kfl00109_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00113_0110","kfl00113_0110_v1.1","Klebsormidium nitens","(at5g56130 : 265.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors.  Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; TEX1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93107|pf20_chlre : 85.9) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00126_0100","kfl00126_0100_v1.1","Klebsormidium nitens","(at1g76140 : 952.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1904.0) &  (original description: no original description)","protein_coding"
"Kfl00126_0240","kfl00126_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00126_0260","kfl00126_0260_v1.1","Klebsormidium nitens","(at1g77550 : 792.0) tubulin-tyrosine ligases;tubulin-tyrosine ligases; FUNCTIONS IN: tubulin-tyrosine ligase activity; INVOLVED IN: protein modification process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tubulin-tyrosine ligase (InterPro:IPR004344); Has 1977 Blast hits to 1869 proteins in 143 species: Archae - 0; Bacteria - 8; Metazoa - 1192; Fungi - 29; Plants - 92; Viruses - 0; Other Eukaryotes - 656 (source: NCBI BLink). & (reliability: 1584.0) &  (original description: no original description)","protein_coding"
"Kfl00127_0120","kfl00127_0120_v1.1","Klebsormidium nitens","(at5g51200 : 1069.0) Protein of unknown function (DUF3414); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); Has 203 Blast hits to 190 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 18; Plants - 55; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 2138.0) &  (original description: no original description)","protein_coding"
"Kfl00127_0150","kfl00127_0150_v1.1","Klebsormidium nitens","(at5g05560 : 589.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1178.0) &  (original description: no original description)","protein_coding"
"Kfl00129_0240","kfl00129_0240_v1.1","Klebsormidium nitens","(at3g07400 : 260.0) lipase class 3 family protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); Has 393 Blast hits to 389 proteins in 69 species: Archae - 0; Bacteria - 12; Metazoa - 12; Fungi - 52; Plants - 275; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"Kfl00133_0070","kfl00133_0070_v1.1","Klebsormidium nitens","(at2g48060 : 875.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 1750.0) &  (original description: no original description)","protein_coding"
"Kfl00134_0220","kfl00134_0220_v1.1","Klebsormidium nitens","(at1g34130 : 937.0) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.; staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 1874.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0040","kfl00137_0040_v1.1","Klebsormidium nitens","(at3g53130 : 702.0) Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3.; LUTEIN DEFICIENT 1 (LUT1); FUNCTIONS IN: epsilon hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 97, subfamily A, polypeptide 3 (TAIR:AT1G31800.1); Has 31038 Blast hits to 30928 proteins in 1581 species: Archae - 62; Bacteria - 3557; Metazoa - 11361; Fungi - 6359; Plants - 8451; Viruses - 3; Other Eukaryotes - 1245 (source: NCBI BLink). & (o48921|c97b2_soybn : 416.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"Kfl00140_0050","kfl00140_0050_v1.1","Klebsormidium nitens","(at5g53760 : 304.0) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).; MILDEW RESISTANCE LOCUS O 11 (MLO11); FUNCTIONS IN: calmodulin binding; INVOLVED IN: cell death, defense response; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G26700.1); Has 534 Blast hits to 523 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 525; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (o49873|mloh1_horvu : 234.0) MLO protein homolog 1 - Hordeum vulgare (Barley) & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0340","kfl00144_0340_v1.1","Klebsormidium nitens","(at5g20990 : 432.0) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.; B73; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, conserved site (InterPro:IPR008284), Molybdenum cofactor synthesis (InterPro:IPR020817), MoeA, N-terminal and linker domain (InterPro:IPR005110), MoeA, C-terminal, domain IV (InterPro:IPR005111), Molybdopterin binding (InterPro:IPR001453); Has 13106 Blast hits to 12710 proteins in 1951 species: Archae - 648; Bacteria - 8919; Metazoa - 385; Fungi - 192; Plants - 74; Viruses - 0; Other Eukaryotes - 2888 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0080","kfl00147_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00152_0020","kfl00152_0020_v1.1","Klebsormidium nitens","(at2g30320 : 167.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 2235 Blast hits to 2027 proteins in 681 species: Archae - 89; Bacteria - 873; Metazoa - 390; Fungi - 255; Plants - 163; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00154_0190","kfl00154_0190_v1.1","Klebsormidium nitens","(at1g63110 : 286.0) GPI transamidase subunit PIG-U; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GPI transamidase subunit PIG-U (InterPro:IPR009600); BEST Arabidopsis thaliana protein match is: GPI transamidase subunit PIG-U (TAIR:AT1G12730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"Kfl00174_0020","kfl00174_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00175_0220","kfl00175_0220_v1.1","Klebsormidium nitens","(at4g39850 : 303.0) Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.; peroxisomal ABC transporter 1 (PXA1); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT1G54350.1). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"Kfl00176_0180","kfl00176_0180_v1.1","Klebsormidium nitens","(at1g27595 : 384.0) CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"Kfl00178_0050","kfl00178_0050_v1.1","Klebsormidium nitens","(at5g19690 : 554.0) encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions; staurosporin and temperature sensitive 3-like A (STT3A); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: response to salt stress; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like b (TAIR:AT1G34130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"Kfl00204_0110","kfl00204_0110_v1.1","Klebsormidium nitens","(at4g30920 : 486.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, protein metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30910.1); Has 9817 Blast hits to 9813 proteins in 2024 species: Archae - 18; Bacteria - 5432; Metazoa - 663; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3545 (source: NCBI BLink). & (q6k669|ampl2_orysa : 481.0) Leucine aminopeptidase 2, chloroplast precursor (EC 3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase 2) - Oryza sativa (Rice) & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00209_0200","kfl00209_0200_v1.1","Klebsormidium nitens","(at1g17760 : 442.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-endñprocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (reliability: 884.0) &  (original description: no original description)","protein_coding"
"Kfl00229_0080","kfl00229_0080_v1.1","Klebsormidium nitens","(at1g13750 : 309.0) Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). & (q687e1|npp_horvu : 165.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 618.0) &  (original description: no original description)","protein_coding"
"Kfl00232_0200","kfl00232_0200_v1.1","Klebsormidium nitens","(at3g51050 : 613.0) FG-GAP repeat-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell-matrix adhesion; LOCATED IN: integrin complex, integral to membrane, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 99 Blast hits to 94 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (reliability: 1226.0) &  (original description: no original description)","protein_coding"
"Kfl00255_0160","kfl00255_0160_v1.1","Klebsormidium nitens","(at1g80950 : 259.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: calcineurin B subunit-related (TAIR:AT2G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"Kfl00264_0240","kfl00264_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00294_0010","kfl00294_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00307_0020","kfl00307_0020_v1.1","Klebsormidium nitens","(at5g12950 : 696.0) FUNCTIONS IN: catalytic activity; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1680 (InterPro:IPR012878), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Putative glycosyl hydrolase of unknown function (DUF1680) (TAIR:AT5G12960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1392.0) &  (original description: no original description)","protein_coding"
"Kfl00309_0060","kfl00309_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00321_0070","kfl00321_0070_v1.1","Klebsormidium nitens","(at1g78920 : 1139.0) Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.; vacuolar H+-pyrophosphatase 2 (VP2); FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p21616|avp_phaau : 423.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 2278.0) &  (original description: no original description)","protein_coding"
"Kfl00325_0090","kfl00325_0090_v1.1","Klebsormidium nitens","(at1g60990 : 366.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; INVOLVED IN: glycine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-binding, YgfZ (InterPro:IPR017703), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G11860.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"Kfl00342_0020","kfl00342_0020_v1.1","Klebsormidium nitens","(at5g36950 : 640.0) Encodes a putative DegP protease.; DegP protease 10 (DegP10); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2 (InterPro:IPR015724), Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 3 (TAIR:AT1G65630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00343_0140","kfl00343_0140_v1.1","Klebsormidium nitens","(at4g38220 : 482.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 964.0) &  (original description: no original description)","protein_coding"
"Kfl00356_0030","kfl00356_0030_v1.1","Klebsormidium nitens","(at5g23630 : 132.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure.  MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"Kfl00357_0110","kfl00357_0110_v1.1","Klebsormidium nitens","(at5g52560 : 723.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1446.0) &  (original description: no original description)","protein_coding"
"Kfl00373_0110","kfl00373_0110_v1.1","Klebsormidium nitens","(at1g06220 : 1359.0) Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.; MATERNAL EFFECT EMBRYO ARREST 5 (MEE5); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: regulation of embryo sac egg cell differentiation, embryo development ending in seed dormancy; LOCATED IN: nuclear speck, cell wall, plasma membrane; EXPRESSED IN: whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT5G25230.1); Has 61019 Blast hits to 57504 proteins in 4658 species: Archae - 1314; Bacteria - 38464; Metazoa - 2393; Fungi - 1714; Plants - 1333; Viruses - 1; Other Eukaryotes - 15800 (source: NCBI BLink). & (o23755|ef2_betvu : 538.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2718.0) &  (original description: no original description)","protein_coding"
"Kfl00377_0050","kfl00377_0050_v1.1","Klebsormidium nitens","(at3g27530 : 578.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast.  A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.; golgin candidate 6 (GC6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, Golgi vesicle transport, vesicle fusion with Golgi apparatus; LOCATED IN: cytosol, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uso1/p115 like vesicle tethering protein, C-terminal (InterPro:IPR006955), Armadillo-type fold (InterPro:IPR016024), Uso1/p115 like vesicle tethering protein, head region (InterPro:IPR006953); Has 8674 Blast hits to 6651 proteins in 794 species: Archae - 167; Bacteria - 1154; Metazoa - 4083; Fungi - 784; Plants - 382; Viruses - 31; Other Eukaryotes - 2073 (source: NCBI BLink). & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"Kfl00383_0070","kfl00383_0070_v1.1","Klebsormidium nitens","(at2g47590 : 367.0) photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,; photolyase/blue-light receptor 2 (PHR2); FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 4854 Blast hits to 4851 proteins in 1205 species: Archae - 82; Bacteria - 2283; Metazoa - 348; Fungi - 105; Plants - 417; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (q651u1|cryd_orysa : 217.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"Kfl00384_0100","kfl00384_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00387_0040","kfl00387_0040_v1.1","Klebsormidium nitens","(at4g20130 : 193.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00471_0080","kfl00471_0080_v1.1","Klebsormidium nitens","(at2g43710 : 391.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (p29108|stad_brana : 390.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Brassica napus (Rape) & (reliability: 782.0) &  (original description: no original description)","protein_coding"
"Kfl00473_0010","kfl00473_0010_v1.1","Klebsormidium nitens","(at2g07360 : 422.0) SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). & (reliability: 844.0) &  (original description: no original description)","protein_coding"
"Kfl00494_0040","kfl00494_0040_v1.1","Klebsormidium nitens","(at3g57180 : 320.0) BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 (BPG2); FUNCTIONS IN: GTP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, developmental process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10620.1); Has 5185 Blast hits to 4152 proteins in 947 species: Archae - 97; Bacteria - 1334; Metazoa - 1316; Fungi - 649; Plants - 254; Viruses - 94; Other Eukaryotes - 1441 (source: NCBI BLink). & (q6ypg5|nos_orysa : 84.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0010","kfl00502_0010_v1.1","Klebsormidium nitens","(at3g48770 : 292.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 584.0) &  (original description: no original description)","protein_coding"
"Kfl00512_0010","kfl00512_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00525_0010","kfl00525_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00538_0040","kfl00538_0040_v1.1","Klebsormidium nitens","(at2g05120 : 259.0) Nucleoporin, Nup133/Nup155-like; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nup133/Nup155-like, N-terminal (InterPro:IPR014908), Nucleoporin, Nup133/Nup155-like, C-terminal (InterPro:IPR007187). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"Kfl00656_0010","kfl00656_0010_v1.1","Klebsormidium nitens","(at3g07180 : 263.0) GPI transamidase component PIG-S-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-glycan biosynthesis class S protein (InterPro:IPR019540). & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"Kfl00700_0040","kfl00700_0040_v1.1","Klebsormidium nitens","(at1g76260 : 316.0) DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 (DWA2); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G20540.1); Has 7905 Blast hits to 6688 proteins in 412 species: Archae - 0; Bacteria - 764; Metazoa - 3555; Fungi - 1654; Plants - 1112; Viruses - 0; Other Eukaryotes - 820 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"Kfl00706_0020","kfl00706_0020_v1.1","Klebsormidium nitens","(at1g74910 : 576.0) ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). & (reliability: 1152.0) &  (original description: no original description)","protein_coding"
"Kfl00722_0050","kfl00722_0050_v1.1","Klebsormidium nitens","(at4g10320 : 1428.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (reliability: 2856.0) &  (original description: no original description)","protein_coding"
"Kfl00726_0060","kfl00726_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00768_0030","kfl00768_0030_v1.1","Klebsormidium nitens","(at4g17610 : 561.0) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 6630 Blast hits to 6614 proteins in 1865 species: Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50; Plants - 109; Viruses - 0; Other Eukaryotes - 1574 (source: NCBI BLink). & (reliability: 1122.0) &  (original description: no original description)","protein_coding"
"Kfl00802_0070","kfl00802_0070_v1.1","Klebsormidium nitens","(at3g47060 : 201.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). & (o82150|ftsh_tobac : 199.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00806_0030","kfl00806_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00820_0010","kfl00820_0010_v1.1","Klebsormidium nitens","(at3g25620 : 304.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1). & (q8gu89|pdr4_orysa : 138.0) Pleiotropic drug resistance protein 4 - Oryza sativa (Rice) & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"Kfl00842_0030","kfl00842_0030_v1.1","Klebsormidium nitens","(at3g18860 : 577.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), PLAA family ubiquitin binding, PFU (InterPro:IPR015155), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), PUL (InterPro:IPR013535); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 46729 Blast hits to 23224 proteins in 745 species: Archae - 52; Bacteria - 6206; Metazoa - 17661; Fungi - 11352; Plants - 5937; Viruses - 0; Other Eukaryotes - 5521 (source: NCBI BLink). & (q39336|gblp_brana : 86.3) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g05030","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os01g32660","No alias","Oryza sativa","STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed","protein_coding"
"LOC_Os01g59500","No alias","Oryza sativa","U3 small nucleolar RNA-associated protein 11, putative, expressed","protein_coding"
"LOC_Os02g01560","No alias","Oryza sativa","40S ribosomal protein S4, putative, expressed","protein_coding"
"LOC_Os02g06500","No alias","Oryza sativa","DSHCT domain containing protein, expressed","protein_coding"
"LOC_Os02g10070","No alias","Oryza sativa","citrate synthase, putative, expressed","protein_coding"
"LOC_Os02g11750","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os02g18660","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g29300","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g36710","No alias","Oryza sativa","SET, putative, expressed","protein_coding"
"LOC_Os02g38680","No alias","Oryza sativa","EMB2423, putative, expressed","protein_coding"
"LOC_Os02g47860","No alias","Oryza sativa","uridine kinase, putative, expressed","protein_coding"
"LOC_Os02g47940","No alias","Oryza sativa","aminotransferase, classes I and II, domain containing protein, expressed","protein_coding"
"LOC_Os03g01970","No alias","Oryza sativa","THO complex subunit 1, putative, expressed","protein_coding"
"LOC_Os03g02540","No alias","Oryza sativa","proteasome subunit, putative, expressed","protein_coding"
"LOC_Os03g26960","No alias","Oryza sativa","intron-binding protein aquarius, putative, expressed","protein_coding"
"LOC_Os03g29170","No alias","Oryza sativa","sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed","protein_coding"
"LOC_Os03g38930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g38990","No alias","Oryza sativa","DNA-binding protein, putative, expressed","protein_coding"
"LOC_Os03g44310","No alias","Oryza sativa","initiation factor 2 subunit family domain containing protein, expressed","protein_coding"
"LOC_Os03g52794","No alias","Oryza sativa","phosphatidylinositol kinase, putative, expressed","protein_coding"
"LOC_Os03g53950","No alias","Oryza sativa","strictosidine synthase, putative, expressed","protein_coding"
"LOC_Os03g54780","No alias","Oryza sativa","STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed","protein_coding"
"LOC_Os03g57900","No alias","Oryza sativa","zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed","protein_coding"
"LOC_Os04g31700","No alias","Oryza sativa","methylisocitrate lyase 2, putative, expressed","protein_coding"
"LOC_Os04g35900","No alias","Oryza sativa","translocon Tic40, putative, expressed","protein_coding"
"LOC_Os04g49610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g56630","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g01550","No alias","Oryza sativa","ZOS5-01 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os05g12220","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g12460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g29760","No alias","Oryza sativa","ferrochelatase-2, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os05g41010","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os05g48510","No alias","Oryza sativa","phenylalanyl-tRNA synthetase beta chain, putative, expressed","protein_coding"
"LOC_Os05g49230","No alias","Oryza sativa","ribosomal RNA large subunit methyltransferase J, putative, expressed","protein_coding"
"LOC_Os06g02160","No alias","Oryza sativa","AMP-binding enzyme family protein, expressed","protein_coding"
"LOC_Os06g06600","No alias","Oryza sativa","OsFBX187 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os06g09370","No alias","Oryza sativa","PTF1, putative, expressed","protein_coding"
"LOC_Os07g06060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08729","No alias","Oryza sativa","ATP-dependent DNA helicase 2 subunit 1, putative, expressed","protein_coding"
"LOC_Os07g10630","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g13870","No alias","Oryza sativa","OsFBX229 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os07g23340","No alias","Oryza sativa","male sterility protein, putative, expressed","protein_coding"
"LOC_Os07g27320","No alias","Oryza sativa","glycosyl hydrolase family 10 protein, putative, expressed","protein_coding"
"LOC_Os07g38280","No alias","Oryza sativa","insulin-degrading enzyme, putative, expressed","protein_coding"
"LOC_Os07g43980","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os08g01620","No alias","Oryza sativa","shwachman-Bodian-Diamond syndrome protein, putative, expressed","protein_coding"
"LOC_Os08g19660","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g34879","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g38850","No alias","Oryza sativa","phosphatidylinositol transfer, putative, expressed","protein_coding"
"LOC_Os08g41900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g07160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g28890","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os09g37520","No alias","Oryza sativa","DUF630/DUF632 domains containing protein, putative, expressed","protein_coding"
"LOC_Os10g08599","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g20340","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g22039","No alias","Oryza sativa","mitochondrial import inner membrane translocase subunit Tim17, putative, expressed","protein_coding"
"LOC_Os10g35550","No alias","Oryza sativa","pre-mRNA-processing factor 6, putative, expressed","protein_coding"
"LOC_Os10g35960","No alias","Oryza sativa","NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os11g05100","No alias","Oryza sativa","nucleolar GTPase, putative, expressed","protein_coding"
"LOC_Os11g08330","No alias","Oryza sativa","POLD1 - Putative DNA polymerase delta catalytic subunit, expressed","protein_coding"
"LOC_Os11g11020","No alias","Oryza sativa","DAG protein, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os11g36420","No alias","Oryza sativa","sialyltransferase family domain containing protein, expressed","protein_coding"
"LOC_Os12g01360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g18860","No alias","Oryza sativa","OsPOP23 - Putative Prolyl Oligopeptidase homologue, expressed","protein_coding"
"LOC_Os12g36950","No alias","Oryza sativa","CTP synthase, putative, expressed","protein_coding"
"LOC_Os12g40590","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"Mp1g04210.1","No alias","Marchantia polymorpha","subunit beta of succinyl-CoA ligase heterodimer","protein_coding"
"Mp1g06520.1","No alias","Marchantia polymorpha","component SPCs2 of SPC endoplasmic signal peptidase complex","protein_coding"
"Mp1g09070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g11140.1","No alias","Marchantia polymorpha","component Tom6 of outer mitochondrion membrane TOM translocation system","protein_coding"
"Mp1g12260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g14750.1","No alias","Marchantia polymorpha","EF-Tu translation elongation factor","protein_coding"
"Mp1g17040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g18200.1","No alias","Marchantia polymorpha","enoyl-CoA reductase (ECR)","protein_coding"
"Mp1g18810.1","No alias","Marchantia polymorpha","deoxyhypusine synthase","protein_coding"
"Mp1g25810.1","No alias","Marchantia polymorpha","large subunit beta of AP-1 trans-Golgi network cargo adaptor complex. large subunit beta of AP-2 cargo adaptor complex","protein_coding"
"Mp1g28220.1","No alias","Marchantia polymorpha","subunit epsilon of coat protein complex","protein_coding"
"Mp2g02300.1","No alias","Marchantia polymorpha","component STT3 of oligosaccharyl transferase (OST) complex","protein_coding"
"Mp2g03080.1","No alias","Marchantia polymorpha","light chain of clathrin triskelion","protein_coding"
"Mp2g06730.1","No alias","Marchantia polymorpha","uridylate kinase","protein_coding"
"Mp2g08380.1","No alias","Marchantia polymorpha","component eIF2-alpha of eIF2 Met-tRNA binding factor complex","protein_coding"
"Mp2g10800.1","No alias","Marchantia polymorpha","UDP-L-arabinose mutase","protein_coding"
"Mp2g13270.1","No alias","Marchantia polymorpha","RAB-GTPase guanine nucleotide exchange factor (LOT)","protein_coding"
"Mp2g15830.1","No alias","Marchantia polymorpha","biotin carboxyl carrier subunit of polymeric acetyl-CoA carboxylase complex","protein_coding"
"Mp2g16810.1","No alias","Marchantia polymorpha","component COG3 of COG (Conserved-Oligomeric Golgi) complex","protein_coding"
"Mp2g18280.1","No alias","Marchantia polymorpha","proton-translocating pyrophosphatase (VHP2)","protein_coding"
"Mp2g19470.1","No alias","Marchantia polymorpha","UDP-D-glucuronic acid decarboxylase","protein_coding"
"Mp2g21750.1","No alias","Marchantia polymorpha","prohibitin component of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Mp3g04060.1","No alias","Marchantia polymorpha","subunit beta2 of coat protein complex","protein_coding"
"Mp3g13250.1","No alias","Marchantia polymorpha","Acyl-lipid (8-3)-desaturase OS=Physcomitrella patens subsp. patens (sp|a9siz6|d5fad_phypa : 679.0)","protein_coding"
"Mp3g14330.1","No alias","Marchantia polymorpha","Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana (sp|q9spe6|snaa2_arath : 289.0)","protein_coding"
"Mp3g23620.1","No alias","Marchantia polymorpha","component Tom7 of outer mitochondrion membrane TOM translocation system","protein_coding"
"Mp3g24360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g03440.1","No alias","Marchantia polymorpha","ERD2 COPI trafficking K/HDEL-signature receptor","protein_coding"
"Mp4g08400.1","No alias","Marchantia polymorpha","lumazine synthase (RibE)","protein_coding"
"Mp4g12900.1","No alias","Marchantia polymorpha","component Tom5 of outer mitochondrion membrane TOM translocation system","protein_coding"
"Mp4g16790.1","No alias","Marchantia polymorpha","ketoacyl-ACP reductase","protein_coding"
"Mp4g21450.1","No alias","Marchantia polymorpha","accessory component Sec63 of co-translational insertion system","protein_coding"
"Mp4g22520.1","No alias","Marchantia polymorpha","component OS9 of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Mp5g08390.1","No alias","Marchantia polymorpha","aspartate-semialdehyde dehydrogenase","protein_coding"
"Mp5g16320.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g01940.1","No alias","Marchantia polymorpha","nucleotide sugar transporter (URGT/UXT)","protein_coding"
"Mp6g09060.1","No alias","Marchantia polymorpha","biotin carboxylase subunit of polymeric acetyl-CoA carboxylase complex","protein_coding"
"Mp6g17990.1","No alias","Marchantia polymorpha","histone chaperone (NAP)","protein_coding"
"Mp6g21010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g21410.1","No alias","Marchantia polymorpha","XPO4 nucleocytoplasmic transport karyopherin","protein_coding"
"Mp6g21530.1","No alias","Marchantia polymorpha","component VPS52/POK of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes","protein_coding"
"Mp7g05200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g12740.1","No alias","Marchantia polymorpha","ribitol kinase","protein_coding"
"Mp8g07720.1","No alias","Marchantia polymorpha","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"Mp8g15150.1","No alias","Marchantia polymorpha","component mtRPS9 of small ribosomal subunit proteome","protein_coding"
"Mp8g17230.1","No alias","Marchantia polymorpha","cyclin (CYCD)","protein_coding"
"Potri.013G068100","No alias","Populus trichocarpa","tRNA synthetase beta subunit family protein","protein_coding"
"Potri.018G070200","No alias","Populus trichocarpa","tRNA synthetase beta subunit family protein","protein_coding"
"Pp1s100_63V6","No alias","Physcomitrella patens","protein binding zinc ion binding","protein_coding"
"Pp1s109_267V6","No alias","Physcomitrella patens","alpha-glucosidase ii","protein_coding"
"Pp1s10_252V6","No alias","Physcomitrella patens","2-oxoglutaratee1 subunit","protein_coding"
"Pp1s115_78V6","No alias","Physcomitrella patens","vps52 sac2 family protein","protein_coding"
"Pp1s115_80V6","No alias","Physcomitrella patens","sorting nexin 1","protein_coding"
"Pp1s117_71V6","No alias","Physcomitrella patens","dna methyltransferase","protein_coding"
"Pp1s119_57V6","No alias","Physcomitrella patens","abc transporter related","protein_coding"
"Pp1s12_275V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s133_24V6","No alias","Physcomitrella patens","voltage-gated clc-type chloride","protein_coding"
"Pp1s133_58V6","No alias","Physcomitrella patens","F7J8.160; oligopeptide transporter - like protein [Arabidopsis thaliana]","protein_coding"
"Pp1s134_54V6","No alias","Physcomitrella patens","at4g20130-like protein","protein_coding"
"Pp1s136_114V6","No alias","Physcomitrella patens","rna-binding protein 8a","protein_coding"
"Pp1s141_73V6","No alias","Physcomitrella patens","leucine-rich repeat transmembrane protein","protein_coding"
"Pp1s143_122V6","No alias","Physcomitrella patens","T29A15.130; importin beta-2 subunit family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s14_205V6","No alias","Physcomitrella patens","dolichyl-phosphate beta-glucosyltransferase","protein_coding"
"Pp1s159_2V6","No alias","Physcomitrella patens","MTG13.14; proline-rich protein family [Arabidopsis thaliana]","protein_coding"
"Pp1s164_16V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s169_133V6","No alias","Physcomitrella patens","at1g26760 t24p13_13","protein_coding"
"Pp1s173_137V6","No alias","Physcomitrella patens","upl6 (ubiquitin protein ligase 6) ubiquitin-protein ligase","protein_coding"
"Pp1s177_52V6","No alias","Physcomitrella patens","atcul1 (cullin 1)","protein_coding"
"Pp1s17_17V6","No alias","Physcomitrella patens","xyloglucan 6-","protein_coding"
"Pp1s180_26V6","No alias","Physcomitrella patens","atp-binding cassette","protein_coding"
"Pp1s180_30V6","No alias","Physcomitrella patens","protein phosphatase 2 (formerly 2a) regulatory subunit b gamma","protein_coding"
"Pp1s193_48V6","No alias","Physcomitrella patens","vacuolar protein sorting 8 homolog","protein_coding"
"Pp1s209_41V6","No alias","Physcomitrella patens","RPM1-interacting protein 4 [Arabidopsis thaliana]","protein_coding"
"Pp1s20_351V6","No alias","Physcomitrella patens","phenylalanyl-trnabeta subunit","protein_coding"
"Pp1s218_20V6","No alias","Physcomitrella patens","cofactor required for sp1 transcriptional activation subunit 9","protein_coding"
"Pp1s224_37V6","No alias","Physcomitrella patens","alkylated dna repair protein","protein_coding"
"Pp1s235_87V6","No alias","Physcomitrella patens","aspartyl-trna synthetase","protein_coding"
"Pp1s242_66V6","No alias","Physcomitrella patens","fructose-6-phosphate-2-kinase fructose- -bisphosphatase","protein_coding"
"Pp1s246_24V6","No alias","Physcomitrella patens","F9E10.6; methyladenine glycosylase family protein [EC:3.2.2.20] [KO:K01246] [Arabidopsis thaliana]","protein_coding"
"Pp1s267_90V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s26_191V6","No alias","Physcomitrella patens","ap-1 complex subunit gamma-","protein_coding"
"Pp1s283_9V6","No alias","Physcomitrella patens","nig (nsp (nuclear shuttle protein)-interacting gtpase) gtp binding gtpase","protein_coding"
"Pp1s292_13V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s307_62V6","No alias","Physcomitrella patens","at3g15410 mjk13_7","protein_coding"
"Pp1s311_71V6","No alias","Physcomitrella patens","F21O3.28; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s31_189V6","No alias","Physcomitrella patens","MUG13.15; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s32_330V6","No alias","Physcomitrella patens","ccr4-not transcription complex","protein_coding"
"Pp1s32_58V6","No alias","Physcomitrella patens","gtp binding","protein_coding"
"Pp1s334_25V6","No alias","Physcomitrella patens","fg-gap repeat intergrin alpha chain","protein_coding"
"Pp1s338_68V6","No alias","Physcomitrella patens","tripartite motif-containing 32","protein_coding"
"Pp1s33_73V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s350_23V6","No alias","Physcomitrella patens","asparagine synthetase","protein_coding"
"Pp1s352_17V6","No alias","Physcomitrella patens","tlc domain containing 1","protein_coding"
"Pp1s356_3V6","No alias","Physcomitrella patens","nmda receptor regulated 1","protein_coding"
"Pp1s35_49V6","No alias","Physcomitrella patens","carbohydrate kinase family","protein_coding"
"Pp1s35_94V6","No alias","Physcomitrella patens","dihydrolipoyl dehydrogenase","protein_coding"
"Pp1s387_51V6","No alias","Physcomitrella patens","aspartic proteinase asp1","protein_coding"
"Pp1s40_71V6","No alias","Physcomitrella patens","F22H5.14; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s412_13V6","No alias","Physcomitrella patens","MSF19.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s41_230V6","No alias","Physcomitrella patens","F2P9.16; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s42_183V6","No alias","Physcomitrella patens","ankyrin repeat-containing","protein_coding"
"Pp1s42_258V6","No alias","Physcomitrella patens","contains ESTs D15893(C1477),C72138(E1066),AU101125(E1066) similar to Arabidopsis thaliana chromosome 4, F7J7_90 unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s43_170V6","No alias","Physcomitrella patens","T18B16.90; early-responsive to dehydration stress protein (ERD3) [Arabidopsis thaliana]","protein_coding"
"Pp1s45_277V6","No alias","Physcomitrella patens","two pore calcium channel","protein_coding"
"Pp1s46_235V6","No alias","Physcomitrella patens","MJK13.13; WD-40 repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s47_43V6","No alias","Physcomitrella patens","T7B11.12; transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s523_20V6","No alias","Physcomitrella patens","ribulose-bisphosphate carboxylase oxygenase large subunit n-methyltransferase","protein_coding"
"Pp1s52_256V6","No alias","Physcomitrella patens","F15I1.25; zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s52_70V6","No alias","Physcomitrella patens","r- sec22-family","protein_coding"
"Pp1s55_319V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 2 alpha subunit eif2","protein_coding"
"Pp1s61_277V6","No alias","Physcomitrella patens","amidohydrolase family protein","protein_coding"
"Pp1s62_159V6","No alias","Physcomitrella patens","protein transport factor","protein_coding"
"Pp1s6_11V6","No alias","Physcomitrella patens","autoinhibited h+ atpase","protein_coding"
"Pp1s6_242V6","No alias","Physcomitrella patens","T4K22.6; auxin-responsive factor (ARF6) [Arabidopsis thaliana]","protein_coding"
"Pp1s71_174V6","No alias","Physcomitrella patens","phenylalanyl-trnabeta subunit","protein_coding"
"Pp1s72_280V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s73_47V6","No alias","Physcomitrella patens","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kdasubunit precursor","protein_coding"
"Pp1s73_94V6","No alias","Physcomitrella patens","MMM17.22; endomembrane protein 70, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s74_37V6","No alias","Physcomitrella patens","MSJ1.26; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s78_3V6","No alias","Physcomitrella patens","adenylosuccinate lyase","protein_coding"
"Pp1s7_102V6","No alias","Physcomitrella patens","F9F8.6; clathrin heavy chain, putative [KO:K04646] [Arabidopsis thaliana]","protein_coding"
"Pp1s80_128V6","No alias","Physcomitrella patens","atp-dependent rna helicase dhh1","protein_coding"
"Pp1s80_144V6","No alias","Physcomitrella patens","serine threonine-protein phosphatase 5","protein_coding"
"Pp1s84_273V6","No alias","Physcomitrella patens","threonyl-trna synthetase","protein_coding"
"Pp1s88_123V6","No alias","Physcomitrella patens","ubiquitin-protein ligase","protein_coding"
"Pp1s8_6V6","No alias","Physcomitrella patens","ras superfamily gtp-binding protein","protein_coding"
"Pp1s92_65V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s96_73V6","No alias","Physcomitrella patens","xaa-pro aminopeptidase 1","protein_coding"
"Pp1s9_66V6","No alias","Physcomitrella patens","solute carrier family 40 (iron-regulated transporter) member 1","protein_coding"
"PSME_00000058-RA","No alias","Pseudotsuga menziesii","(at3g13470 : 709.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (p08927|rubb_pea : 704.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"PSME_00000183-RA","No alias","Pseudotsuga menziesii","(at1g04170 : 827.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (q9tjq8|eftu_prowi : 94.0) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (reliability: 1654.0) &  (original description: no original description)","protein_coding"
"PSME_00000653-RA","No alias","Pseudotsuga menziesii","(at3g48410 : 377.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 1039 Blast hits to 1035 proteins in 267 species: Archae - 10; Bacteria - 561; Metazoa - 10; Fungi - 51; Plants - 319; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"PSME_00000764-RA","No alias","Pseudotsuga menziesii","(at1g29900 : 741.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 1482.0) &  (original description: no original description)","protein_coding"
"PSME_00001540-RA","No alias","Pseudotsuga menziesii","(o24578|pura_maize : 690.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) - Zea mays (Maize) & (at3g57610 : 688.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (reliability: 1376.0) &  (original description: no original description)","protein_coding"
"PSME_00001751-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002113-RA","No alias","Pseudotsuga menziesii","(at3g48195 : 290.0) Phox (PX) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: intracellular signaling pathway, cell communication; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); Has 654 Blast hits to 601 proteins in 103 species: Archae - 0; Bacteria - 16; Metazoa - 551; Fungi - 11; Plants - 27; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"PSME_00002140-RA","No alias","Pseudotsuga menziesii","(o81221|act_goshi : 745.0) Actin - Gossypium hirsutum (Upland cotton) & (at5g09810 : 743.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (reliability: 1486.0) &  (original description: no original description)","protein_coding"
"PSME_00002329-RA","No alias","Pseudotsuga menziesii","(at1g79620 : 808.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G49760.1); Has 173131 Blast hits to 132948 proteins in 4769 species: Archae - 163; Bacteria - 18653; Metazoa - 51943; Fungi - 10632; Plants - 70309; Viruses - 438; Other Eukaryotes - 20993 (source: NCBI BLink). & (p93194|rpk1_iponi : 273.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"PSME_00002345-RA","No alias","Pseudotsuga menziesii","(at2g30970 : 681.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p28734|aatc_dauca : 394.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (reliability: 1362.0) &  (original description: no original description)","protein_coding"
"PSME_00002523-RA","No alias","Pseudotsuga menziesii","(at4g39080 : 1061.0) Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.; vacuolar proton ATPase A3 (VHA-A3); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A2 (TAIR:AT2G21410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2122.0) &  (original description: no original description)","protein_coding"
"PSME_00002593-RA","No alias","Pseudotsuga menziesii","(at2g46110 : 376.0) Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.; ketopantoate hydroxymethyltransferase 1 (KPHMT1); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Ketopantoate hydroxymethyltransferase (InterPro:IPR003700); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT3G61530.2); Has 7565 Blast hits to 7565 proteins in 2036 species: Archae - 128; Bacteria - 4147; Metazoa - 4; Fungi - 140; Plants - 59; Viruses - 0; Other Eukaryotes - 3087 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"PSME_00002671-RA","No alias","Pseudotsuga menziesii","(q07761|rl23a_tobac : 205.0) 60S ribosomal protein L23a (L25) - Nicotiana tabacum (Common tobacco) & (at2g39460 : 188.0) Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.; ribosomal protein L23AA (RPL23AA); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleotide binding; INVOLVED IN: response to oxidative stress, response to high light intensity, response to cold, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, intracellular, large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L23/L25, N-terminal (InterPro:IPR005633), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025), Ribosomal protein L23 (InterPro:IPR019985); BEST Arabidopsis thaliana protein match is: ribosomal protein L23AB (TAIR:AT3G55280.2); Has 2634 Blast hits to 2634 proteins in 929 species: Archae - 307; Bacteria - 1168; Metazoa - 411; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 486 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00003101-RA","No alias","Pseudotsuga menziesii","(at5g01310 : 338.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00003145-RA","No alias","Pseudotsuga menziesii","(at3g09630 : 579.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT5G02870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"PSME_00003231-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 244.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52578|ifrh_soltu : 237.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00003425-RA","No alias","Pseudotsuga menziesii","(q07353|fl3h_pethy : 508.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (at3g51240 : 494.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00003834-RA","No alias","Pseudotsuga menziesii","(at4g35490 : 105.0) mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"PSME_00003888-RA","No alias","Pseudotsuga menziesii","(at5g11560 : 571.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 1142.0) &  (original description: no original description)","protein_coding"
"PSME_00004064-RA","No alias","Pseudotsuga menziesii","(at1g19360 : 548.0) Nucleotide-diphospho-sugar transferase family protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G75110.1); Has 297 Blast hits to 291 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 280; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 1096.0) &  (original description: no original description)","protein_coding"
"PSME_00004319-RA","No alias","Pseudotsuga menziesii","(at1g72550 : 854.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1708.0) &  (original description: no original description)","protein_coding"
"PSME_00004320-RA","No alias","Pseudotsuga menziesii","(at1g72550 : 177.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00004321-RA","No alias","Pseudotsuga menziesii","(at1g72550 : 552.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (reliability: 1104.0) &  (original description: no original description)","protein_coding"
"PSME_00004528-RA","No alias","Pseudotsuga menziesii","(p25076|cy11_soltu : 425.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (at5g40810 : 422.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (reliability: 844.0) &  (original description: no original description)","protein_coding"
"PSME_00004857-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 354.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 708.0) &  (original description: no original description)","protein_coding"
"PSME_00005095-RA","No alias","Pseudotsuga menziesii","(at3g55620 : 427.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (o81920|if6_betvu : 323.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00005143-RA","No alias","Pseudotsuga menziesii","(at2g01170 : 437.0) Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity.  Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.; bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 874.0) &  (original description: no original description)","protein_coding"
"PSME_00005482-RA","No alias","Pseudotsuga menziesii","(at4g27220 : 208.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00006934-RA","No alias","Pseudotsuga menziesii","(at3g26590 : 555.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G38030.1); Has 11119 Blast hits to 11024 proteins in 1994 species: Archae - 242; Bacteria - 8025; Metazoa - 141; Fungi - 326; Plants - 1364; Viruses - 0; Other Eukaryotes - 1021 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00007118-RA","No alias","Pseudotsuga menziesii","(at1g14670 : 447.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT2G01970.1); Has 1574 Blast hits to 1525 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 610; Fungi - 249; Plants - 451; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"PSME_00007725-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 1417.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 1411.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 2834.0) &  (original description: no original description)","protein_coding"
"PSME_00008063-RA","No alias","Pseudotsuga menziesii","(at4g31480 : 1445.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (reliability: 2890.0) &  (original description: no original description)","protein_coding"
"PSME_00008159-RA","No alias","Pseudotsuga menziesii","(at4g21150 : 542.0) HAPLESS 6 (HAP6); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: response to cold, protein amino acid terminal N-glycosylation; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin II (InterPro:IPR008814). & (reliability: 1084.0) &  (original description: no original description)","protein_coding"
"PSME_00008938-RA","No alias","Pseudotsuga menziesii","(at1g79940 : 848.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (reliability: 1696.0) &  (original description: no original description)","protein_coding"
"PSME_00010345-RA","No alias","Pseudotsuga menziesii","(at4g20940 : 118.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"PSME_00011312-RA","No alias","Pseudotsuga menziesii","(at5g16150 : 603.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41144|stc_ricco : 135.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1206.0) &  (original description: no original description)","protein_coding"
"PSME_00011553-RA","No alias","Pseudotsuga menziesii","(q9fxt9|prs7_orysa : 832.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (at1g53750 : 817.0) 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,; regulatory particle triple-A 1A (RPT1A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 30646 Blast hits to 28391 proteins in 3108 species: Archae - 1452; Bacteria - 10350; Metazoa - 4866; Fungi - 3564; Plants - 3128; Viruses - 30; Other Eukaryotes - 7256 (source: NCBI BLink). & (reliability: 1634.0) &  (original description: no original description)","protein_coding"
"PSME_00011574-RA","No alias","Pseudotsuga menziesii","(at1g16480 : 646.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1). & (q76c99|rf1_orysa : 158.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1292.0) &  (original description: no original description)","protein_coding"
"PSME_00012476-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 361.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 346.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 692.0) &  (original description: no original description)","protein_coding"
"PSME_00012477-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 438.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 419.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"PSME_00013038-RA","No alias","Pseudotsuga menziesii","(at3g18060 : 851.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (reliability: 1702.0) &  (original description: no original description)","protein_coding"
"PSME_00013040-RA","No alias","Pseudotsuga menziesii","(p17614|atpbm_nicpl : 758.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g08690 : 713.0) Encodes the mitochondrial ATP synthase beta-subunit.  This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1426.0) &  (original description: no original description)","protein_coding"
"PSME_00013594-RA","No alias","Pseudotsuga menziesii","(at1g10950 : 759.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein.  Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (reliability: 1518.0) &  (original description: no original description)","protein_coding"
"PSME_00013760-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 759.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 640.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00013922-RA","No alias","Pseudotsuga menziesii","(at5g06600 : 136.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 12 (UBP12); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), MATH (InterPro:IPR002083), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 13 (TAIR:AT3G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"PSME_00013977-RA","No alias","Pseudotsuga menziesii","(p51110|dfra_vitvi : 453.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (at5g42800 : 444.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 888.0) &  (original description: no original description)","protein_coding"
"PSME_00014556-RA","No alias","Pseudotsuga menziesii","(o64937|ef1a_orysa : 851.0) Elongation factor 1-alpha (EF-1-alpha) - Oryza sativa (Rice) & (at5g60390 : 846.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1692.0) &  (original description: no original description)","protein_coding"
"PSME_00014747-RA","No alias","Pseudotsuga menziesii","(p56725|zox_phavu : 298.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (at4g34135 : 233.0) The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.; UDP-glucosyltransferase 73B2 (UGT73B2); FUNCTIONS IN: flavonol 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glucosyltransferase activity; INVOLVED IN: flavonol biosynthetic process, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 73B3 (TAIR:AT4G34131.1); Has 4778 Blast hits to 4740 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 4776; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"PSME_00014978-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 130.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00015164-RA","No alias","Pseudotsuga menziesii","(at5g24400 : 274.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"PSME_00015534-RA","No alias","Pseudotsuga menziesii","(at5g53540 : 258.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G27680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p54774|cdc48_soybn : 89.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00015659-RA","No alias","Pseudotsuga menziesii","(at3g16950 : 798.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (p31023|dldh_pea : 239.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1596.0) &  (original description: no original description)","protein_coding"
"PSME_00015805-RA","No alias","Pseudotsuga menziesii","(at1g74030 : 742.0) Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.; enolase 1 (ENO1); FUNCTIONS IN: phosphopyruvate hydratase activity; INVOLVED IN: trichome morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: Enolase (TAIR:AT2G36530.1); Has 13710 Blast hits to 13689 proteins in 3755 species: Archae - 283; Bacteria - 5826; Metazoa - 2303; Fungi - 284; Plants - 460; Viruses - 0; Other Eukaryotes - 4554 (source: NCBI BLink). & (q43130|eno_mescr : 576.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1484.0) &  (original description: no original description)","protein_coding"
"PSME_00016126-RA","No alias","Pseudotsuga menziesii","(at2g19130 : 589.0) S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink). & (p17801|kpro_maize : 235.0) Putative receptor protein kinase ZmPK1 precursor (EC 2.7.11.1) - Zea mays (Maize) & (gnl|cdd|68872 : 195.0) no description available & (gnl|cdd|38754 : 95.6) no description available & (reliability: 1178.0) &  (original description: no original description)","protein_coding"
"PSME_00016306-RA","No alias","Pseudotsuga menziesii","(at3g02080 : 245.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1131 Blast hits to 1131 proteins in 394 species: Archae - 214; Bacteria - 4; Metazoa - 402; Fungi - 148; Plants - 164; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (p40978|rs19_orysa : 231.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00016668-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 261.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 131.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00016728-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 234.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00016793-RA","No alias","Pseudotsuga menziesii","(at3g20050 : 487.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (p54411|tcpe2_avesa : 139.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"PSME_00017606-RA","No alias","Pseudotsuga menziesii","(at4g31750 : 215.0) Encodes HopW1-1-Interacting protein 2 (WIN2).  Interacts with the P. syringae effector HopW1-1.  WIN2 has protein phosphatase activity.  Modulates plant defenses against bacteria.  Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 2 (WIN2); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, defense response to bacterium; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G24940.1); Has 8917 Blast hits to 8860 proteins in 1196 species: Archae - 18; Bacteria - 2164; Metazoa - 1691; Fungi - 821; Plants - 2764; Viruses - 9; Other Eukaryotes - 1450 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"PSME_00017732-RA","No alias","Pseudotsuga menziesii","(at4g34450 : 1333.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (reliability: 2666.0) &  (original description: no original description)","protein_coding"
"PSME_00018042-RA","No alias","Pseudotsuga menziesii","(at4g11420 : 942.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (q40554|if3a_tobac : 911.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (reliability: 1884.0) &  (original description: no original description)","protein_coding"
"PSME_00018861-RA","No alias","Pseudotsuga menziesii","(at3g03960 : 802.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (p54411|tcpe2_avesa : 175.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1604.0) &  (original description: no original description)","protein_coding"
"PSME_00019203-RA","No alias","Pseudotsuga menziesii","(q9sek3|hxk1_spiol : 286.0) Hexokinase-1 (EC 2.7.1.1) (SoHxK1) - Spinacia oleracea (Spinach) & (at2g19860 : 261.0) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.; hexokinase 2 (HXK2); CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 1 (TAIR:AT4G29130.1); Has 2393 Blast hits to 2115 proteins in 319 species: Archae - 0; Bacteria - 88; Metazoa - 1275; Fungi - 598; Plants - 290; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00019667-RA","No alias","Pseudotsuga menziesii","(at5g49690 : 262.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43716|ufog_pethy : 252.0) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) - Petunia hybrida (Petunia) & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"PSME_00020187-RA","No alias","Pseudotsuga menziesii","(q8w1l6|mfp_orysa : 588.0) Peroxisomal fatty acid beta-oxidation multifunctional protein (MFP) [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase (E & (at4g29010 : 578.0) Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities; ABNORMAL INFLORESCENCE MERISTEM (AIM1); FUNCTIONS IN: enoyl-CoA hydratase activity; INVOLVED IN: multicellular organismal development, flower development, fatty acid beta-oxidation, seed germination; LOCATED IN: cell wall, peroxisome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 47636 Blast hits to 46241 proteins in 2477 species: Archae - 813; Bacteria - 30277; Metazoa - 2018; Fungi - 1063; Plants - 649; Viruses - 0; Other Eukaryotes - 12816 (source: NCBI BLink). & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"PSME_00020360-RA","No alias","Pseudotsuga menziesii","(at2g38010 : 294.0) Neutral/alkaline non-lysosomal ceramidase; FUNCTIONS IN: ceramidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823); BEST Arabidopsis thaliana protein match is: Neutral/alkaline non-lysosomal ceramidase (TAIR:AT1G07380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"PSME_00020981-RA","No alias","Pseudotsuga menziesii","(at2g47510 : 769.0) Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.; fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: response to oxidative stress, response to salt stress, pollen tube development; LOCATED IN: mitochondrion; EXPRESSED IN: cotyledon, male gametophyte, guard cell, root; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: FUMARASE 2 (TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins in 2822 species: Archae - 389; Bacteria - 12991; Metazoa - 306; Fungi - 295; Plants - 106; Viruses - 0; Other Eukaryotes - 5649 (source: NCBI BLink). & (reliability: 1538.0) &  (original description: no original description)","protein_coding"
"PSME_00021033-RA","No alias","Pseudotsuga menziesii","(at1g79650 : 386.0) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (q40742|rad23_orysa : 369.0) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"PSME_00021673-RA","No alias","Pseudotsuga menziesii","(at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase.  GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 359.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"PSME_00022051-RA","No alias","Pseudotsuga menziesii","(at5g57120 : 122.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00022451-RA","No alias","Pseudotsuga menziesii","(p68173|sahh_tobac : 879.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (at4g13940 : 869.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (reliability: 1738.0) &  (original description: no original description)","protein_coding"
"PSME_00022974-RA","No alias","Pseudotsuga menziesii",""(at5g57110 : 723.0) Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.; ""autoinhibited Ca2+ -ATPase, isoform 8"" (ACA8); FUNCTIONS IN: protein self-association, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase 10 (TAIR:AT4G29900.1); Has 45517 Blast hits to 34552 proteins in 3221 species: Archae - 872; Bacteria - 31142; Metazoa - 4022; Fungi - 2709; Plants - 2112; Viruses - 3; Other Eukaryotes - 4657 (source: NCBI BLink). & (q2qmx9|aca1_orysa : 494.0) Calcium-transporting ATPase 1, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) - Oryza sativa (Rice) & (reliability: 1422.0) &  (original description: no original description)"","protein_coding"
"PSME_00023019-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023023-RA","No alias","Pseudotsuga menziesii","(q42908|pmgi_mescr : 962.0) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I) - Mesembryanthemum crystallinum (Common ice plant) & (at1g09780 : 928.0) Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrial envelope, cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT3G08590.2); Has 4822 Blast hits to 4813 proteins in 1698 species: Archae - 54; Bacteria - 3035; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1235 (source: NCBI BLink). & (reliability: 1856.0) &  (original description: no original description)","protein_coding"
"PSME_00023085-RA","No alias","Pseudotsuga menziesii","(at3g18370 : 303.0) ATSYTF; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 5534 Blast hits to 4008 proteins in 246 species: Archae - 0; Bacteria - 0; Metazoa - 3360; Fungi - 437; Plants - 1305; Viruses - 0; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00023390-RA","No alias","Pseudotsuga menziesii","(at2g27920 : 440.0) serine carboxypeptidase-like 51 (SCPL51); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p52712|cbpx_orysa : 119.0) Serine carboxypeptidase-like precursor (EC 3.4.16.-) - Oryza sativa (Rice) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"PSME_00023467-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 233.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00023734-RA","No alias","Pseudotsuga menziesii","(at3g18190 : 820.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (p54411|tcpe2_avesa : 299.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1640.0) &  (original description: no original description)","protein_coding"
"PSME_00024040-RA","No alias","Pseudotsuga menziesii","(at5g48380 : 373.0) Encodes a BAK1-interacting receptor-like kinase named BIR1.  Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.; BAK1-interacting receptor-like kinase 1 (BIR1); FUNCTIONS IN: protein kinase activity; INVOLVED IN: negative regulation of defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G28450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 201.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 746.0) &  (original description: no original description)","protein_coding"
"PSME_00024119-RA","No alias","Pseudotsuga menziesii","(at4g33270 : 434.0) putative cdc20 protein (CDC20.1); CDC20.1; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G33260.1); Has 49595 Blast hits to 24757 proteins in 709 species: Archae - 60; Bacteria - 7548; Metazoa - 19325; Fungi - 10981; Plants - 5978; Viruses - 0; Other Eukaryotes - 5703 (source: NCBI BLink). & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"PSME_00025180-RA","No alias","Pseudotsuga menziesii","(at4g38510 : 715.0) ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1). & (q40079|vatb2_horvu : 710.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"PSME_00026712-RA","No alias","Pseudotsuga menziesii","(at1g19140 : 281.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00027090-RA","No alias","Pseudotsuga menziesii","(at4g26910 : 226.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT5G55070.1); Has 24826 Blast hits to 20752 proteins in 2368 species: Archae - 154; Bacteria - 14691; Metazoa - 760; Fungi - 487; Plants - 406; Viruses - 4; Other Eukaryotes - 8324 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00027487-RA","No alias","Pseudotsuga menziesii","(at3g20920 : 387.0) translocation protein-related; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocation protein Sec62 (InterPro:IPR004728); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00027607-RA","No alias","Pseudotsuga menziesii","(at5g62700 : 563.0) encodes tubulin beta-2/beta-3 chain; tubulin beta chain 3 (TUB3); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to cold; LOCATED IN: tubulin complex, cell wall; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 2 (TAIR:AT5G62690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41784|tbb7_maize : 563.0) Tubulin beta-7 chain (Beta-7 tubulin) - Zea mays (Maize) & (reliability: 1126.0) &  (original description: no original description)","protein_coding"
"PSME_00028180-RA","No alias","Pseudotsuga menziesii","(at5g18420 : 438.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"PSME_00028619-RA","No alias","Pseudotsuga menziesii","(at2g21770 : 313.0) cellulose synthase, related to CESA6.; cellulose synthase A9 (CESA9); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: seed coat development, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A2 (TAIR:AT4G39350.1); Has 3186 Blast hits to 2819 proteins in 625 species: Archae - 9; Bacteria - 1125; Metazoa - 1; Fungi - 19; Plants - 1939; Viruses - 5; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00028970-RA","No alias","Pseudotsuga menziesii","(at3g14130 : 234.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14150.2); Has 13074 Blast hits to 13056 proteins in 2002 species: Archae - 228; Bacteria - 6055; Metazoa - 447; Fungi - 755; Plants - 289; Viruses - 0; Other Eukaryotes - 5300 (source: NCBI BLink). & (p05414|gox_spiol : 230.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00029014-RA","No alias","Pseudotsuga menziesii","(at3g22990 : 394.0) Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues.; LEAF AND FLOWER RELATED (LFR); FUNCTIONS IN: binding; INVOLVED IN: flower development, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); Has 69 Blast hits to 69 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 2; Plants - 25; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 788.0) &  (original description: no original description)","protein_coding"
"PSME_00029325-RA","No alias","Pseudotsuga menziesii","(at3g57030 : 340.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (p18417|stsy_catro : 137.0) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"PSME_00029428-RA","No alias","Pseudotsuga menziesii","(at2g13600 : 384.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 46660 Blast hits to 13875 proteins in 226 species: Archae - 0; Bacteria - 4; Metazoa - 74; Fungi - 58; Plants - 45878; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"PSME_00030761-RA","No alias","Pseudotsuga menziesii","(at4g24380 : 268.0) CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00031234-RA","No alias","Pseudotsuga menziesii","(at3g06350 : 360.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00031818-RA","No alias","Pseudotsuga menziesii","(at4g38630 : 161.0) Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities; regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"PSME_00032034-RA","No alias","Pseudotsuga menziesii","(at1g29900 : 784.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 1568.0) &  (original description: no original description)","protein_coding"
"PSME_00032667-RA","No alias","Pseudotsuga menziesii","(q6es10|hat1_orysa : 253.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (at5g56740 : 250.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of  lysine 12 of histone H4 reduces radioactive acetylation by  HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00032909-RA","No alias","Pseudotsuga menziesii","(at2g01070 : 564.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1128.0) &  (original description: no original description)","protein_coding"
"PSME_00032968-RA","No alias","Pseudotsuga menziesii","(at1g19780 : 461.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel  8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"PSME_00032993-RA","No alias","Pseudotsuga menziesii","(at4g30610 : 480.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1.  It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (p52711|cbp23_horvu : 454.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 960.0) &  (original description: no original description)","protein_coding"
"PSME_00033931-RA","No alias","Pseudotsuga menziesii","(at2g38840 : 197.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: Guanylate-binding family protein (TAIR:AT5G46070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00034161-RA","No alias","Pseudotsuga menziesii","(at3g20560 : 206.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).; PDI-like 5-3 (PDIL5-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Thioredoxin protein with domain of unknown function (DUF1692) (TAIR:AT1G50950.1); Has 5147 Blast hits to 3670 proteins in 375 species: Archae - 8; Bacteria - 112; Metazoa - 2494; Fungi - 904; Plants - 886; Viruses - 3; Other Eukaryotes - 740 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"PSME_00034275-RA","No alias","Pseudotsuga menziesii","(at5g03160 : 515.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (reliability: 1030.0) &  (original description: no original description)","protein_coding"
"PSME_00035279-RA","No alias","Pseudotsuga menziesii","(at3g61440 : 428.0) Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.; cysteine synthase C1 (CYSC1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (o81155|cyskp_soltu : 384.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"PSME_00035313-RA","No alias","Pseudotsuga menziesii","(at4g25160 : 588.0) U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT5G61550.1); Has 118360 Blast hits to 115683 proteins in 4597 species: Archae - 135; Bacteria - 13482; Metazoa - 43605; Fungi - 9605; Plants - 33456; Viruses - 341; Other Eukaryotes - 17736 (source: NCBI BLink). & (o24585|cri4_maize : 157.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1176.0) &  (original description: no original description)","protein_coding"
"PSME_00035623-RA","No alias","Pseudotsuga menziesii","(at2g26210 : 172.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00036810-RA","No alias","Pseudotsuga menziesii","(at2g24220 : 379.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1). & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00037338-RA","No alias","Pseudotsuga menziesii","(at5g41040 : 291.0) Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.; HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G63560.1); Has 2973 Blast hits to 2952 proteins in 200 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 233; Plants - 2730; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (o24645|hcbt1_diaca : 201.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00037549-RA","No alias","Pseudotsuga menziesii","(at5g13020 : 297.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00038947-RA","No alias","Pseudotsuga menziesii","(p51117|cfi_vitvi : 256.0) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone isomerase) - Vitis vinifera (Grape) & (at3g55120 : 235.0) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems.; TRANSPARENT TESTA 5 (TT5); FUNCTIONS IN: chalcone isomerase activity; INVOLVED IN: response to UV, response to UV-B, response to karrikin, response to sucrose stimulus, flavonoid biosynthetic process; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, extrinsic to endoplasmic reticulum membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 391 Blast hits to 390 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 390; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00039262-RA","No alias","Pseudotsuga menziesii","(p30079|chsy_pinsy : 652.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 556.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids.  Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"PSME_00039613-RA","No alias","Pseudotsuga menziesii","(at5g20960 : 145.0) Encodes aldehyde oxidase AA01.; aldehyde oxidase 1 (AAO1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 2 (TAIR:AT3G43600.1); Has 18277 Blast hits to 17619 proteins in 1295 species: Archae - 420; Bacteria - 10771; Metazoa - 1021; Fungi - 121; Plants - 280; Viruses - 0; Other Eukaryotes - 5664 (source: NCBI BLink). & (q852m2|aldo3_orysa : 143.0) Probable aldehyde oxidase 3 (EC 1.2.3.1) (AO-3) - Oryza sativa (Rice) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00039928-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 555.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"PSME_00040075-RA","No alias","Pseudotsuga menziesii","(at3g17860 : 101.0) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment  induces their proteasome-mediated degradation. Furthermore, JAI3 negatively  regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00040896-RA","No alias","Pseudotsuga menziesii","(q43644|ndus1_soltu : 1106.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (at5g37510 : 1070.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I).  The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2140.0) &  (original description: no original description)","protein_coding"
"PSME_00041255-RA","No alias","Pseudotsuga menziesii","(at3g02065 : 581.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 212.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1162.0) &  (original description: no original description)","protein_coding"
"PSME_00041971-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 647.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (q09131|ppaf_soybn : 269.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 1294.0) &  (original description: no original description)","protein_coding"
"PSME_00041980-RA","No alias","Pseudotsuga menziesii","(at3g18040 : 333.0) Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.; MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 323.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00043319-RA","No alias","Pseudotsuga menziesii","(q69r21|aldo4_orysa : 511.0) Probable aldehyde oxidase 4 (EC 1.2.3.1) (AO-4) - Oryza sativa (Rice) & (at5g20960 : 498.0) Encodes aldehyde oxidase AA01.; aldehyde oxidase 1 (AAO1); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: aldehyde oxidase 2 (TAIR:AT3G43600.1); Has 18277 Blast hits to 17619 proteins in 1295 species: Archae - 420; Bacteria - 10771; Metazoa - 1021; Fungi - 121; Plants - 280; Viruses - 0; Other Eukaryotes - 5664 (source: NCBI BLink). & (reliability: 976.0) &  (original description: no original description)","protein_coding"
"PSME_00043417-RA","No alias","Pseudotsuga menziesii","(at5g24400 : 241.0) Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.; EMBRYO DEFECTIVE 2024 (EMB2024); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: defense response to oomycetes, defense response to bacterium, carbohydrate metabolic process, cellular response to redox state, embryo development ending in seed dormancy; LOCATED IN: peroxisome, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucosamine/galactosamine-6-phosphate isomerase (InterPro:IPR006148), 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: 6-phosphogluconolactonase 2 (TAIR:AT3G49360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"PSME_00044639-RA","No alias","Pseudotsuga menziesii","(o80377|rssa_dauca : 414.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 387.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00046196-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 732.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 723.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1464.0) &  (original description: no original description)","protein_coding"
"PSME_00047211-RA","No alias","Pseudotsuga menziesii",""(at1g30210 : 134.0) TCP family protein involved in heterochronic regulation of leaf differentiation.; ""TEOSINTE BRANCHED 1, cycloidea, and PCF family 24"" (TCP24); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 (TAIR:AT4G18390.2); Has 2035 Blast hits to 1535 proteins in 329 species: Archae - 0; Bacteria - 5; Metazoa - 128; Fungi - 18; Plants - 1446; Viruses - 0; Other Eukaryotes - 438 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)"","protein_coding"
"PSME_00048529-RA","No alias","Pseudotsuga menziesii","(q6vaf9|tba4_goshi : 837.0) Tubulin alpha-4 chain (Alpha-4 tubulin) - Gossypium hirsutum (Upland cotton) & (at1g50010 : 832.0) Encodes alpha-2,4 tubulin.  TUA2 and TUA4 encode identical proteins.; tubulin alpha-2 chain (TUA2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-4 chain (TAIR:AT1G04820.1); Has 22626 Blast hits to 22529 proteins in 4679 species: Archae - 4; Bacteria - 25; Metazoa - 4391; Fungi - 13400; Plants - 1532; Viruses - 0; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 1664.0) &  (original description: no original description)","protein_coding"
"PSME_00049129-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 726.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (o22585|amyb_medsa : 455.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Medicago sativa (Alfalfa) & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"PSME_00049721-RA","No alias","Pseudotsuga menziesii","(at3g18660 : 702.0) Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.; plant glycogenin-like starch initiation protein 1 (PGSIP1); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, starch metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 2 (TAIR:AT1G77130.1). & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"PSME_00050230-RA","No alias","Pseudotsuga menziesii","(at5g10050 : 296.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"PSME_00050271-RA","No alias","Pseudotsuga menziesii","(q42806|kpyc_soybn : 882.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g08570 : 870.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G63680.1); Has 10268 Blast hits to 10160 proteins in 2717 species: Archae - 168; Bacteria - 6093; Metazoa - 541; Fungi - 219; Plants - 538; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (reliability: 1740.0) &  (original description: no original description)","protein_coding"
"PSME_00050431-RA","No alias","Pseudotsuga menziesii","(p51091|ldox_maldo : 434.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (at4g22880 : 431.0) encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.; leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"PSME_00050640-RA","No alias","Pseudotsuga menziesii","(at4g33300 : 260.0) ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein,  RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00052834-RA","No alias","Pseudotsuga menziesii","(at3g47520 : 545.0) Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.; malate dehydrogenase (MDH); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cold; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 1 (TAIR:AT2G22780.1); Has 17295 Blast hits to 17293 proteins in 5537 species: Archae - 237; Bacteria - 12026; Metazoa - 1437; Fungi - 394; Plants - 805; Viruses - 0; Other Eukaryotes - 2396 (source: NCBI BLink). & (q42972|mdhg_orysa : 409.0) Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Oryza sativa (Rice) & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00053047-RA","No alias","Pseudotsuga menziesii","(q07353|fl3h_pethy : 499.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) - Petunia hybrida (Petunia) & (at3g51240 : 485.0) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.; flavanone 3-hydroxylase (F3H); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1). & (reliability: 970.0) &  (original description: no original description)","protein_coding"
"PSME_00053452-RA","No alias","Pseudotsuga menziesii","(q42806|kpyc_soybn : 240.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (at5g56350 : 239.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT4G26390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00054411-RA","No alias","Pseudotsuga menziesii","(p52427|psa4_spiol : 397.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (at3g22110 : 385.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"PSME_00054687-RA","No alias","Pseudotsuga menziesii","(o24076|gblp_medsa : 541.0) Guanine nucleotide-binding protein subunit beta-like protein - Medicago sativa (Alfalfa) & (at1g18080 : 518.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (reliability: 1026.0) &  (original description: no original description)","protein_coding"
"PSME_00054986-RA","No alias","Pseudotsuga menziesii","(at3g17700 : 127.0) cyclic nucleotide-binding transporter 1, member of a family  of cyclic nucleotide gated channels.; cyclic nucleotide-binding transporter 1 (CNBT1); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: response to nematode; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 19 (TAIR:AT3G17690.1); Has 2782 Blast hits to 2720 proteins in 214 species: Archae - 0; Bacteria - 20; Metazoa - 1493; Fungi - 0; Plants - 916; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00055516-RA","No alias","Pseudotsuga menziesii","(q9sbq9|f3ph_pethy : 553.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (at5g07990 : 538.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"PSME_00056515-RA","No alias","Pseudotsuga menziesii","(at5g18520 : 506.0) Lung seven transmembrane receptor family protein; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT3G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"Seita.1G002100.1","No alias","Setaria italica ","component *(uS5m) of small mitoribosomal-subunit proteome","protein_coding"
"Seita.1G014600.1","No alias","Setaria italica ","component *(ARPF2) of ARPF2-ARRS1 complex","protein_coding"
"Seita.1G044300.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(NUP205)","protein_coding"
"Seita.1G090600.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(NUP160)","protein_coding"
"Seita.1G107500.1","No alias","Setaria italica ","regulatory protein (ARC6) of plastid division FtsZ assembly","protein_coding"
"Seita.1G117100.1","No alias","Setaria italica ","component *(uL30) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.1G148400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G159800.1","No alias","Setaria italica ","assembly factor (SAD2/EMA) of RNA-induced silencing complex (RISC) assembly","protein_coding"
"Seita.1G206600.1","No alias","Setaria italica ","brassinosteroid co-receptor protein kinase *(BAK/SERK) & LRR-II protein kinase & co-receptor kinase component of FLS2-BAK1 flagellin receptor complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G228700.1","No alias","Setaria italica ","nascent RNA chaperone *(LA)","protein_coding"
"Seita.1G230300.1","No alias","Setaria italica ","component *(uL23) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.1G300800.1","No alias","Setaria italica ","scaffold component *(VCS) of mRNA decapping complex","protein_coding"
"Seita.1G332500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G046200.1","No alias","Setaria italica ","methylation reader *(ECT)","protein_coding"
"Seita.2G083500.1","No alias","Setaria italica ","component *(eIF3e) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Seita.2G155900.1","No alias","Setaria italica ","nuclear-encoded organellar RNA polymerase *(NEP)","protein_coding"
"Seita.2G178000.1","No alias","Setaria italica ","component *(NOC1) of ribosomal-subunit proteome nuclear export complex","protein_coding"
"Seita.2G195400.1","No alias","Setaria italica ","component *(PCID2/Thp1) of TREX-2 mRNP trafficking complex","protein_coding"
"Seita.2G345600.1","No alias","Setaria italica ","regulatory protein *(PTRE1) of 26S proteasome","protein_coding"
"Seita.2G366700.1","No alias","Setaria italica ","subunit alpha of succinyl-CoA ligase heterodimer & EC_6.2 ligase forming carbon-sulfur bond","protein_coding"
"Seita.2G420600.1","No alias","Setaria italica ","deubiquitinase *(UBP24)","protein_coding"
"Seita.3G016100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G017000.1","No alias","Setaria italica ","component *(STT3) of oligosaccharyl transferase (OST) complex","protein_coding"
"Seita.3G028800.1","No alias","Setaria italica ","component *(FtsZ1) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Seita.3G035800.1","No alias","Setaria italica ","leucine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Seita.3G036500.1","No alias","Setaria italica ","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"Seita.3G040100.1","No alias","Setaria italica ","homologous recombination repair factor *(MDC1)","protein_coding"
"Seita.3G058800.1","No alias","Setaria italica ","pre-60S ribosomal subunit assembly factor *(SMO4)","protein_coding"
"Seita.3G060100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G083900.1","No alias","Setaria italica ","bHLH-type transcription factor","protein_coding"
"Seita.3G114400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G126000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G228300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G276600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G277800.1","No alias","Setaria italica ","pre-60S ribosomal-subunit proteome export factor *(ARX1)","protein_coding"
"Seita.3G299900.1","No alias","Setaria italica ","proline-tRNA ligase","protein_coding"
"Seita.3G370400.1","No alias","Setaria italica ","component *(CTU2) of CTU1-CTU2 tRNA thiouridylase complex","protein_coding"
"Seita.4G006800.1","No alias","Setaria italica ","platform ATPase CDC48","protein_coding"
"Seita.4G052500.1","No alias","Setaria italica ","subunit alpha of CCT chaperonin folding complex *(CCT1)","protein_coding"
"Seita.4G151800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G231000.1","No alias","Setaria italica ","deacetylase component *(HDA19) of SNL-HDA19 histone deacetylase complex & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & histone deacetylase *(HDA8)","protein_coding"
"Seita.5G014700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G045000.1","No alias","Setaria italica ","large subunit *(ECR1) of E1 RUB ubiquitin-activating enzyme complex","protein_coding"
"Seita.5G061900.1","No alias","Setaria italica ","subunit beta *(CCT2) of CCT chaperonin folding complex","protein_coding"
"Seita.5G102300.1","No alias","Setaria italica ","regulatory protein of DNA methylation pathway *(IDN/IDP)","protein_coding"
"Seita.5G129000.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase","protein_coding"
"Seita.5G132100.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & glutamine-tRNA ligase","protein_coding"
"Seita.5G154200.1","No alias","Setaria italica ","component *(SMU1) of SMU splicing factor complex","protein_coding"
"Seita.5G164900.1","No alias","Setaria italica ","nucleocytoplasmic transport karyopherin *(XPO5) & miRNA nuclear export factor (HASTY) of RNA-induced silencing complex (RISC) export","protein_coding"
"Seita.5G262600.1","No alias","Setaria italica ","component *(eL20) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.5G417300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G032000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G068900.1","No alias","Setaria italica ","RNA editing factor *(ORRM2)","protein_coding"
"Seita.6G089900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G194600.1","No alias","Setaria italica ","component *(ELP2) of ELONGATOR transcription elongation complex","protein_coding"
"Seita.6G217300.1","No alias","Setaria italica ","component *(eL32) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.6G237400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G237900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G244400.1","No alias","Setaria italica ","peptidyl-prolyl cis-trans isomerase *(CYP71) & EC_5.2 cis-trans-isomerase","protein_coding"
"Seita.7G057900.1","No alias","Setaria italica ","component *(eS8) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.7G064800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G068900.1","No alias","Setaria italica ","dynamin-like protein *(DRP3)","protein_coding"
"Seita.7G097600.1","No alias","Setaria italica ","RNA helicase (MAA3) involved in gametogenesis","protein_coding"
"Seita.7G099000.1","No alias","Setaria italica ","component *(eS10) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.7G231000.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(NUP88)","protein_coding"
"Seita.7G248800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G257900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G306900.1","No alias","Setaria italica ","component *(uS9) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.7G310400.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(ALADIN)","protein_coding"
"Seita.8G062200.1","No alias","Setaria italica ","component *(POLD1) of DNA polymerase delta complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.8G082900.1","No alias","Setaria italica ","component *(NOT11) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Seita.8G091200.1","No alias","Setaria italica ","Serpin protease inhibitor","protein_coding"
"Seita.8G097300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G056000.1","No alias","Setaria italica ","component *(uL4) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.9G113100.1","No alias","Setaria italica ","kinase co-activator (ILITHYIA/GCN1) involved in eIF2 complex activation","protein_coding"
"Seita.9G159200.1","No alias","Setaria italica ","component *(MSI1) of PRC2 histone methylation complex & component *(CAF1c/MSI) of CAF1 histone chaperone complex","protein_coding"
"Seita.9G183600.1","No alias","Setaria italica ","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding"
"Seita.9G204000.1","No alias","Setaria italica ","component *(bS18m) of small mitoribosomal-subunit proteome","protein_coding"
"Seita.9G282400.1","No alias","Setaria italica ","chaperone involved in spliceosome assembly *(ICLN)","protein_coding"
"Seita.9G329100.1","No alias","Setaria italica ","component *(mS47) of small mitoribosomal-subunit proteome & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Seita.9G406000.1","No alias","Setaria italica ","component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex","protein_coding"
"Seita.9G420200.1","No alias","Setaria italica ","channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Seita.9G426600.1","No alias","Setaria italica ","RNA polymerase-II nuclear import factor *(GPN1)","protein_coding"
"Seita.9G427400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G484200.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(NUP133)","protein_coding"
"Seita.9G490200.1","No alias","Setaria italica ","EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase","protein_coding"
"Seita.9G501100.1","No alias","Setaria italica ","component *(ELP5) of ELONGATOR transcription elongation complex","protein_coding"
"Seita.9G503900.1","No alias","Setaria italica ","serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Seita.9G523200.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex","protein_coding"
"Seita.9G540700.1","No alias","Setaria italica ","component *(MTB) of adenosine N6-methyltransferase complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Seita.9G557400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G004200.1","No alias","Sorghum bicolor ","pseudouridine monophosphate glycosylase *(PUMY)","protein_coding"
"Sobic.001G025600.1","No alias","Sorghum bicolor ","regulatory component *(HYPK) of NatA/NatE N-terminal acetylase complexes","protein_coding"
"Sobic.001G041200.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase *(CYP22) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.001G105700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G212800.1","No alias","Sorghum bicolor ","component *(PFD5) of Prefoldin co-chaperone complex","protein_coding"
"Sobic.001G279601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G349500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G379200.1","No alias","Sorghum bicolor ","TruA-type tRNA pseudouridine synthase & EC_5.4 intramolecular transferase","protein_coding"
"Sobic.001G387800.1","No alias","Sorghum bicolor ","channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system","protein_coding"
"Sobic.001G441900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G447300.1","No alias","Sorghum bicolor ","ribosome recycling factor *(RLI/ABCE)","protein_coding"
"Sobic.001G466200.1","No alias","Sorghum bicolor ","component *(ELP5) of ELONGATOR transcription elongation complex","protein_coding"
"Sobic.001G466700.1","No alias","Sorghum bicolor ","E3 ubiquitin protein ligase *(PUB49) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.001G482900.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & beta-1,4-mannosyl-transferase *(ALG1)","protein_coding"
"Sobic.001G485800.1","No alias","Sorghum bicolor ","omega-amidase","protein_coding"
"Sobic.001G491200.1","No alias","Sorghum bicolor ","subfamily ABCC transporter","protein_coding"
"Sobic.001G512900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G524300.1","No alias","Sorghum bicolor ","sphingoid long-chain base kinase *(LCBK2)","protein_coding"
"Sobic.001G535500.2","No alias","Sorghum bicolor ","folyl-polyglutamate synthetase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G544100.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase","protein_coding"
"Sobic.002G027800.1","No alias","Sorghum bicolor ","component *(uL5m) of large mitoribosomal-subunit proteome","protein_coding"
"Sobic.002G144275.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G150700.1","No alias","Sorghum bicolor ","mRNA poly-A-tail binding factor *(PABP)","protein_coding"
"Sobic.002G199400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G284200.1","No alias","Sorghum bicolor ","monofunctional enoyl-CoA hydratase","protein_coding"
"Sobic.002G298100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G371200.1","No alias","Sorghum bicolor ","component *(Sm-G) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Sobic.002G373800.1","No alias","Sorghum bicolor ","component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex","protein_coding"
"Sobic.002G394600.1","No alias","Sorghum bicolor ","alpha-type-7 component *(PAG) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.002G396000.1","No alias","Sorghum bicolor ","component *(SYF1/MAC9)  of MAC spliceosome-associated complex","protein_coding"
"Sobic.002G403200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G409700.2","No alias","Sorghum bicolor ","catalytic component *(REV3) of DNA polymerase zeta complex","protein_coding"
"Sobic.002G410700.1","No alias","Sorghum bicolor ","subunit F of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Sobic.003G119400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G123100.1","No alias","Sorghum bicolor ","component *(APC5) of (APC/C)-dependent ubiquitination platform subcomplex","protein_coding"
"Sobic.003G143800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G196800.1","No alias","Sorghum bicolor ","component *(eL19) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.003G258900.1","No alias","Sorghum bicolor ","component *(SF3A3) of splicing factor 3A complex","protein_coding"
"Sobic.003G267800.1","No alias","Sorghum bicolor ","nucleoporin of nuclear pore complex *(NUP50)","protein_coding"
"Sobic.003G274400.1","No alias","Sorghum bicolor ","component *(CAF1c/MSI) of CAF1 histone chaperone complex & flowering time factor *(FVE)","protein_coding"
"Sobic.003G300900.1","No alias","Sorghum bicolor ","EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Sobic.003G375200.1","No alias","Sorghum bicolor ","spindle assembly checkpoint protein *(MAD1)","protein_coding"
"Sobic.003G444600.1","No alias","Sorghum bicolor ","substrate binding component *(TGD2) of TGD lipid importer complex","protein_coding"
"Sobic.004G019600.1","No alias","Sorghum bicolor ","associated component *(SAP18) of histone deacetylase machineries","protein_coding"
"Sobic.004G039900.1","No alias","Sorghum bicolor ","accessory component *(MIDGET) of meiotic topoisomerase-VI complex","protein_coding"
"Sobic.004G130400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G133700.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G171200.1","No alias","Sorghum bicolor ","substrate adaptor *(RBV) of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Sobic.004G260200.1","No alias","Sorghum bicolor ","component *(NDUFA11/B14.7) of NADH dehydrogenase alpha subcomplex & component *(PRAT3/B14.7) of inner mitochondrion membrane TIM translocation system","protein_coding"
"Sobic.004G268100.1","No alias","Sorghum bicolor ","ornithine carbamoyltransferase & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.004G307500.1","No alias","Sorghum bicolor ","subunit alpha of phenylalanine-tRNA ligase complex & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Sobic.004G314000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G356900.1","No alias","Sorghum bicolor ","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Sobic.005G014600.1","No alias","Sorghum bicolor ","endo-beta-1,4-mannanase","protein_coding"
"Sobic.005G129201.1","No alias","Sorghum bicolor ","RNA editing factor *(MEF14)","protein_coding"
"Sobic.005G149300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G180800.1","No alias","Sorghum bicolor ","CCT-interacting tubulin folding cofactor *(PLP3)","protein_coding"
"Sobic.005G229300.1","No alias","Sorghum bicolor ","component *(uS2) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.006G013900.1","No alias","Sorghum bicolor ","component *(NRPB11) of RNA polymerase II complex & component *(NRPE11) of RNA polymerase V complex & component *(NRPD11) of RNA polymerase IV complex","protein_coding"
"Sobic.006G044400.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.006G100000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G111800.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G123600.4","No alias","Sorghum bicolor ","SIRTUIN-type histone deacetylase *(SRT)","protein_coding"
"Sobic.006G148700.1","No alias","Sorghum bicolor ","adenosine kinase *(ADK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G152000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G155100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G196300.1","No alias","Sorghum bicolor ","alpha-1,3/1,6-mannosyltransferase *(ALG2)","protein_coding"
"Sobic.006G269800.1","No alias","Sorghum bicolor ","component *(TFB2) of TFIIh basal transcription factor complex & component *(TFB2) of multifunctional TFIIh complex","protein_coding"
"Sobic.006G271700.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Sobic.006G272200.1","No alias","Sorghum bicolor ","component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im) complex","protein_coding"
"Sobic.007G001500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G030600.1","No alias","Sorghum bicolor ","NSUN-group-II rRNA methyltransferase","protein_coding"
"Sobic.007G134900.1","No alias","Sorghum bicolor ","component *(NDUFB1/MNLL) of NADH dehydrogenase beta subcomplex","protein_coding"
"Sobic.007G192800.1","No alias","Sorghum bicolor ","RanGDP-specific nuclear import factor *(NTF2)","protein_coding"
"Sobic.007G207200.1","No alias","Sorghum bicolor ","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"Sobic.007G219800.1","No alias","Sorghum bicolor ","heme-o to heme-a conversion factor *(COX15) of cytochrome c oxidase assembly","protein_coding"
"Sobic.007G224900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G038600.1","No alias","Sorghum bicolor ","diaminopimelate decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.008G172100.1","No alias","Sorghum bicolor ","component *(uL14m) of large mitoribosomal-subunit proteome","protein_coding"
"Sobic.008G173000.1","No alias","Sorghum bicolor ","subunit beta of E1 subcomplex of pyruvate dehydrogenase complex","protein_coding"
"Sobic.008G173900.1","No alias","Sorghum bicolor ","phosphatase *(PPKL) & brassinosteroid signalling protein phosphatase *(BSU/BSL) & regulatory protein phosphatase *(BSL) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.009G046100.1","No alias","Sorghum bicolor ","subunit beta of phenylalanine-tRNA ligase complex","protein_coding"
"Sobic.009G118200.1","No alias","Sorghum bicolor ","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"Sobic.009G158100.1","No alias","Sorghum bicolor ","ribosome docking factor *(MDM38)","protein_coding"
"Sobic.009G164000.1","No alias","Sorghum bicolor ","cysteine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Sobic.009G177700.1","No alias","Sorghum bicolor ","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Sobic.009G195700.1","No alias","Sorghum bicolor ","prolyl aminopeptidase *(PAP1)","protein_coding"
"Sobic.009G199200.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase) & gamma-glutamyl hydrolase *(GGH)","protein_coding"
"Sobic.010G044200.1","No alias","Sorghum bicolor ","glycolipid transfer protein *(GLTP)","protein_coding"
"Sobic.010G148932.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G154900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G172400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g008310","No alias","Solanum lycopersicum","Phenylalanyl-tRNA synthetase beta chain family protein (AHRD V3.3 *** B9N5I6_POPTR)","protein_coding"
"Solyc01g009090","No alias","Solanum lycopersicum","Serrate RNA effector molecule-like protein (AHRD V3.3 *** A0A0B0MH79_GOSAR)","protein_coding"
"Solyc01g010370","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G78240.2)","protein_coding"
"Solyc01g010870","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G26850.2)","protein_coding"
"Solyc01g065500","No alias","Solanum lycopersicum","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** AT5G17980.1)","protein_coding"
"Solyc01g066900","No alias","Solanum lycopersicum","cationic amino acid transporter 9 (AHRD V3.3 --* AT1G05940.2)","protein_coding"
"Solyc01g067730","No alias","Solanum lycopersicum","Acyl carrier protein (AHRD V3.3 *** K4AX21_SOLLC)","protein_coding"
"Solyc01g080770","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** K4AXX0_SOLLC)","protein_coding"
"Solyc01g096070","No alias","Solanum lycopersicum","Auxin Response Factor 18","protein_coding"
"Solyc01g106280","No alias","Solanum lycopersicum","PSTVd RNA-biding protein","protein_coding"
"Solyc01g111740","No alias","Solanum lycopersicum","bZIP transcription factor, putative (DUF630 and DUF632) (AHRD V3.3 *-* AT4G39790.1)","protein_coding"
"Solyc02g030450","No alias","Solanum lycopersicum","Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4B594_SOLLC)","protein_coding"
"Solyc02g062270","No alias","Solanum lycopersicum","RNA binding protein, putative (AHRD V3.3 *** B9SZV1_RICCO)","protein_coding"
"Solyc02g062380","No alias","Solanum lycopersicum","voltage dependent anion channel 2 (AHRD V3.3 --* AT5G67500.3)","protein_coding"
"Solyc02g068480","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7JRQ3_MEDTR)","protein_coding"
"Solyc02g069610","No alias","Solanum lycopersicum","Got1/Sft2-like vescicle transport protein family (AHRD V3.3 *** AT5G01430.2)","protein_coding"
"Solyc02g071060","No alias","Solanum lycopersicum","Purine permease (AHRD V3.3 *** A0A072UW47_MEDTR)","protein_coding"
"Solyc02g090190","No alias","Solanum lycopersicum","Molybdenum cofactor sulfurase (AHRD V3.3 *** A0A0B2NTX1_GLYSO)","protein_coding"
"Solyc02g090710","No alias","Solanum lycopersicum","B3 domain-containing protein (AHRD V3.3 *** W9R6M5_9ROSA)","protein_coding"
"Solyc02g093050","No alias","Solanum lycopersicum","WRKY transcription factor 8","protein_coding"
"Solyc02g094390","No alias","Solanum lycopersicum","S-acyltransferase (AHRD V3.3 *** K4BDN4_SOLLC)","protein_coding"
"Solyc03g005350","No alias","Solanum lycopersicum","bHLH transcription factor 018","protein_coding"
"Solyc03g025150","No alias","Solanum lycopersicum","Dentin sialophosphoprotein-related, putative isoform 1 (AHRD V3.3 *-* A0A061G268_THECC)","protein_coding"
"Solyc03g061590","No alias","Solanum lycopersicum","Cell division cycle protein 27 homolog B (AHRD V3.3 *-* CD27B_ARATH),Pfam:PF12895","protein_coding"
"Solyc04g014760","No alias","Solanum lycopersicum","Rho GDP-dissociation inhibitor 1 (AHRD V3.3 *** A0A151S024_CAJCA)","protein_coding"
"Solyc04g016240","No alias","Solanum lycopersicum","Nucleoporin interacting component (Nup93/Nic96-like) family protein (AHRD V3.3 *** AT2G41620.1)","protein_coding"
"Solyc05g017890","No alias","Solanum lycopersicum","THO complex subunit 2 (AHRD V3.3 *-* A0A0B2Q9L7_GLYSO)","protein_coding"
"Solyc05g048850","No alias","Solanum lycopersicum","RNA helicase DEAD18","protein_coding"
"Solyc05g050740","No alias","Solanum lycopersicum","DegV domain-containing protein (AHRD V3.3 *-* A0A0B0NRK7_GOSAR)","protein_coding"
"Solyc05g056510","No alias","Solanum lycopersicum","Mucin-like protein (AHRD V3.3 *** Q8S2G4_ORYSJ)","protein_coding"
"Solyc06g017970","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase 13 (AHRD V3.3 *** W9RB05_9ROSA)","protein_coding"
"Solyc06g071600","No alias","Solanum lycopersicum","Kinetochore protein spc25, putative (AHRD V3.3 *** A0A061FUW7_THECC)","protein_coding"
"Solyc06g083790","No alias","Solanum lycopersicum","succinyl CoA ligase beta subunit","protein_coding"
"Solyc07g007500","No alias","Solanum lycopersicum","Protein TIC 214 (AHRD V3.3 --* TI214_PINKO)","protein_coding"
"Solyc08g007520","No alias","Solanum lycopersicum","Exosome complex component (AHRD V3.3 *** W9RYG2_9ROSA)","protein_coding"
"Solyc08g076350","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT1G32190.1)","protein_coding"
"Solyc08g081120","No alias","Solanum lycopersicum","Kinesin-like protein (AHRD V3.3 *** A0A061G4H7_THECC)","protein_coding"
"Solyc09g009210","No alias","Solanum lycopersicum","transcriptional activator (DUF662) (AHRD V3.3 *** AT2G36410.2)","protein_coding"
"Solyc09g010500","No alias","Solanum lycopersicum","DNA-directed RNA polymerase II family protein (AHRD V3.3 *** B9ID35_POPTR)","protein_coding"
"Solyc09g014160","No alias","Solanum lycopersicum","UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A199UN58_ANACO)","protein_coding"
"Solyc09g072570","No alias","Solanum lycopersicum","Pre-mRNA-splicing factor SLU7 (AHRD V3.3 *** SLU7_ORYSI)","protein_coding"
"Solyc09g075090","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G02840.2)","protein_coding"
"Solyc09g075130","No alias","Solanum lycopersicum","Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** AT3G62840.1)","protein_coding"
"Solyc10g017530","No alias","Solanum lycopersicum","RNA helicase DEAD33","protein_coding"
"Solyc10g074700","No alias","Solanum lycopersicum","Ethanolamine-phosphate cytidylyltransferase (AHRD V3.3 *** PECT1_ARATH)","protein_coding"
"Solyc10g078950","No alias","Solanum lycopersicum","Carbon catabolite repressor 4-like protein (AHRD V3.3 *** A0A0B0P8G6_GOSAR)","protein_coding"
"Solyc10g081160","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *** B9HDR3_POPTR)","protein_coding"
"Solyc11g005250","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein (AHRD V3.3 *** AT3G54460.1)","protein_coding"
"Solyc11g012870","No alias","Solanum lycopersicum","lysM domain-containing protein","protein_coding"
"Solyc11g012880","No alias","Solanum lycopersicum","EamA-like transporter family protein (AHRD V3.3 *** AT1G77610.1)","protein_coding"
"Solyc11g062240","No alias","Solanum lycopersicum","Zinc finger transcription factor 66","protein_coding"
"Solyc11g066260","No alias","Solanum lycopersicum","Vacuolar protein sorting-associated protein 24 like 1 (AHRD V3.3 *** A0A0B2QEZ9_GLYSO)","protein_coding"
"Solyc11g071950","No alias","Solanum lycopersicum","ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** AT5G22040.3)","protein_coding"
"Solyc12g005240","No alias","Solanum lycopersicum","Plant/F3H11-7 protein (AHRD V3.3 *** G7IHE1_MEDTR)","protein_coding"
"Solyc12g009030","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G29830.1)","protein_coding"
"Solyc12g016210","No alias","Solanum lycopersicum","tRNA dimethylallyltransferase (AHRD V3.3 *** A0A0B0PPC4_GOSAR)","protein_coding"
"Solyc12g062290","No alias","Solanum lycopersicum","Protease Do-like 9 (AHRD V3.3 *** W9SJ69_9ROSA)","protein_coding"
"Sopen01g003830","No alias","Solanum pennellii","B3/4 domain","protein_coding"