"sequence_id","alias","species","description","type" "100267","No alias","Selaginella moellendorffii ","LMBR1-like membrane protein","protein_coding" "104776","No alias","Selaginella moellendorffii ","S-domain-2 5","protein_coding" "111947","No alias","Selaginella moellendorffii ","Phosphatidic acid phosphatase (PAP2) family protein","protein_coding" "11493","No alias","Selaginella moellendorffii ","phosphate transporter 2;1","protein_coding" "115356","No alias","Selaginella moellendorffii ","Integrin-linked protein kinase family","protein_coding" "130502","No alias","Selaginella moellendorffii ","D-arabinono-1,4-lactone oxidase family protein","protein_coding" "134463","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "168020","No alias","Selaginella moellendorffii ","glutathione S-transferase TAU 19","protein_coding" "168478","No alias","Selaginella moellendorffii ","6-phosphogluconate dehydrogenase family protein","protein_coding" "169694","No alias","Selaginella moellendorffii ","Ankyrin repeat family protein","protein_coding" "183216","No alias","Selaginella moellendorffii ","DYNAMIN-like 1E","protein_coding" "185127","No alias","Selaginella moellendorffii ","Radical SAM superfamily protein","protein_coding" "230641","No alias","Selaginella moellendorffii ","EXORDIUM like 5","protein_coding" "24258","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding" "31230","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "407558","No alias","Selaginella moellendorffii ","Phototropic-responsive NPH3 family protein","protein_coding" "419323","No alias","Selaginella moellendorffii ","ATP citrate lyase (ACL) family protein","protein_coding" "424604","No alias","Selaginella moellendorffii ","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "431032","No alias","Selaginella moellendorffii ","DHFS-FPGS homolog B","protein_coding" "440258","No alias","Selaginella moellendorffii ","polyamine oxidase 2","protein_coding" "48764","No alias","Selaginella moellendorffii ","Vacuolar iron transporter (VIT) family protein","protein_coding" "60006","No alias","Selaginella moellendorffii ","WD-40 repeat family protein / beige-related","protein_coding" "74678","No alias","Selaginella moellendorffii ","phosphate transporter 2;1","protein_coding" "77427","No alias","Selaginella moellendorffii ","Rad23 UV excision repair protein family","protein_coding" "79692","No alias","Selaginella moellendorffii ","LisH/CRA/RING-U-box domains-containing protein","protein_coding" "80641","No alias","Selaginella moellendorffii ","chloride channel F","protein_coding" "85947","No alias","Selaginella moellendorffii ","Pectin lyase-like superfamily protein","protein_coding" "9237","No alias","Selaginella moellendorffii ","Function unknown","protein_coding" "94334","No alias","Selaginella moellendorffii ","Pyridoxal-5\'-phosphate-dependent enzyme family protein","protein_coding" "98811","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF668)","protein_coding" "A4A49_37346","No alias","Nicotiana attenuata","inorganic phosphate transporter 2-1, chloroplastic","protein_coding" "A4A49_38302","No alias","Nicotiana attenuata","inorganic phosphate transporter 2-1, chloroplastic","protein_coding" "AC183315.4_FG006","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "AC207628.4_FG009","No alias","Zea mays","DNAse I-like superfamily protein","protein_coding" "AC217358.3_FG010","No alias","Zea mays","Function unknown","protein_coding" "AC234515.1_FG003","No alias","Zea mays","tubulin beta 8","protein_coding" "At1g03055","No alias","Arabidopsis thaliana","Beta-carotene isomerase D27, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q7XA78]","protein_coding" "At1g04530","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ31]","protein_coding" "At1g07450","No alias","Arabidopsis thaliana","Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]","protein_coding" "At1g13080","No alias","Arabidopsis thaliana","Cytochrome P450 71B2 [Source:UniProtKB/Swiss-Prot;Acc:O65788]","protein_coding" "At1g14280","No alias","Arabidopsis thaliana","Protein PHYTOCHROME KINASE SUBSTRATE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9T4]","protein_coding" "At1g15290","No alias","Arabidopsis thaliana","Tetratricopeptide repeat (TPR)-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HZK4]","protein_coding" "At1g17990","No alias","Arabidopsis thaliana","Putative 12-oxophytodienoate reductase-like protein 2B [Source:UniProtKB/Swiss-Prot;Acc:P0DI09]","protein_coding" "At1g23740","No alias","Arabidopsis thaliana","NADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]","protein_coding" "At1g26560","No alias","Arabidopsis thaliana","Beta-glucosidase 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZE0]","protein_coding" "At1g27120","No alias","Arabidopsis thaliana","Hydroxyproline O-galactosyltransferase GALT4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXG6]","protein_coding" "At1g30520","No alias","Arabidopsis thaliana","2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYJ1]","protein_coding" "At1g32900","No alias","Arabidopsis thaliana","Granule-bound starch synthase 1, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MAQ0]","protein_coding" "At1g44000","No alias","Arabidopsis thaliana","Protein STAY-GREEN LIKE, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AQ9]","protein_coding" "At1g44800","No alias","Arabidopsis thaliana","WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]","protein_coding" "At1g51500","No alias","Arabidopsis thaliana","WBC12 [Source:UniProtKB/TrEMBL;Acc:A0A178W3S0]","protein_coding" "At1g62250","No alias","Arabidopsis thaliana","F19K23.17 protein [Source:UniProtKB/TrEMBL;Acc:O04589]","protein_coding" "At1g64860","No alias","Arabidopsis thaliana","RNA polymerase sigma factor sigA [Source:UniProtKB/Swiss-Prot;Acc:O24629]","protein_coding" "At1g66330","No alias","Arabidopsis thaliana","Senescence-associated protein AAF, chlorolplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y4]","protein_coding" "At1g68830","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase STN7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S713]","protein_coding" "At1g69160","No alias","Arabidopsis thaliana","Protein BIG GRAIN 1-like E [Source:UniProtKB/Swiss-Prot;Acc:Q93Z37]","protein_coding" "At1g75100","No alias","Arabidopsis thaliana","JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]","protein_coding" "At1g77930","No alias","Arabidopsis thaliana","At1g77930 [Source:UniProtKB/TrEMBL;Acc:Q9SH08]","protein_coding" "At1g79270","No alias","Arabidopsis thaliana","Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]","protein_coding" "At1g79770","No alias","Arabidopsis thaliana","CASP-like protein (DUF1677) [Source:UniProtKB/TrEMBL;Acc:Q9CA85]","protein_coding" "At2g24270","No alias","Arabidopsis thaliana","aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]","protein_coding" "At2g25180","No alias","Arabidopsis thaliana","Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]","protein_coding" "At2g31380","No alias","Arabidopsis thaliana","B-box zinc finger protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SID1]","protein_coding" "At2g36630","No alias","Arabidopsis thaliana","Sulfite exporter TauE/SafE family protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J0]","protein_coding" "At2g37460","No alias","Arabidopsis thaliana","WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]","protein_coding" "At2g41120","No alias","Arabidopsis thaliana","At2g41120 [Source:UniProtKB/TrEMBL;Acc:O80675]","protein_coding" "At2g41290","No alias","Arabidopsis thaliana","Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]","protein_coding" "At2g46830","No alias","Arabidopsis thaliana","Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973]","protein_coding" "At2g47490","No alias","Arabidopsis thaliana","Nicotinamide adenine dinucleotide transporter 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22261]","protein_coding" "At3g01550","No alias","Arabidopsis thaliana","Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]","protein_coding" "At3g02380","No alias","Arabidopsis thaliana","Zinc finger protein CONSTANS-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q96502]","protein_coding" "At3g02470","No alias","Arabidopsis thaliana","S-adenosylmethionine decarboxylase proenzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96286]","protein_coding" "At3g06330","No alias","Arabidopsis thaliana","AT3g06330/F24P17_21 [Source:UniProtKB/TrEMBL;Acc:Q9SQT6]","protein_coding" "At3g15850","No alias","Arabidopsis thaliana","JB67 [Source:UniProtKB/TrEMBL;Acc:A0A178VBZ6]","protein_coding" "At3g16175","No alias","Arabidopsis thaliana","At3g16179/At3g16179 [Source:UniProtKB/TrEMBL;Acc:Q940V5]","protein_coding" "At3g17040","No alias","Arabidopsis thaliana","Protein high chlorophyll fluorescent 107 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG2]","protein_coding" "At3g21890","No alias","Arabidopsis thaliana","BBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7]","protein_coding" "At3g23210","No alias","Arabidopsis thaliana","Transcription factor bHLH34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC7]","protein_coding" "At3g24170","No alias","Arabidopsis thaliana","Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]","protein_coding" "At3g24190","No alias","Arabidopsis thaliana","AT3g24190/MUJ8_17 [Source:UniProtKB/TrEMBL;Acc:Q9LRN0]","protein_coding" "At3g26570","No alias","Arabidopsis thaliana","phosphate transporter 2;1 [Source:TAIR;Acc:AT3G26570]","protein_coding" "At3g27350","No alias","Arabidopsis thaliana","Transcriptional regulator ATRX-like protein [Source:UniProtKB/TrEMBL;Acc:F4IWH1]","protein_coding" "At3g43220","No alias","Arabidopsis thaliana","Phosphoinositide phosphatase SAC3 [Source:UniProtKB/Swiss-Prot;Acc:Q7XZU2]","protein_coding" "At3g51895","No alias","Arabidopsis thaliana","Sulfate transporter 31 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNF9]","protein_coding" "At3g56290","No alias","Arabidopsis thaliana","Potassium transporter [Source:UniProtKB/TrEMBL;Acc:Q9LYL4]","protein_coding" "At3g59400","No alias","Arabidopsis thaliana","Tetrapyrrole-binding protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LX31]","protein_coding" "At4g01450","No alias","Arabidopsis thaliana","WAT1-related protein At4g01450 [Source:UniProtKB/Swiss-Prot;Acc:Q9M129]","protein_coding" "At4g04850","No alias","Arabidopsis thaliana","K(+) efflux antiporter 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0Z3]","protein_coding" "At4g08290","No alias","Arabidopsis thaliana","WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]","protein_coding" "At4g10040","No alias","Arabidopsis thaliana","CYTC-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UZN3]","protein_coding" "At4g15560","No alias","Arabidopsis thaliana","DXS1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I0]","protein_coding" "At4g17840","No alias","Arabidopsis thaliana","At4g17840 [Source:UniProtKB/TrEMBL;Acc:Q0WMZ7]","protein_coding" "At4g22890","No alias","Arabidopsis thaliana","PGR5-LIKE A [Source:UniProtKB/TrEMBL;Acc:A0A178UU76]","protein_coding" "At4g22920","No alias","Arabidopsis thaliana","Protein STAY-GREEN 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82741]","protein_coding" "At4g33666","No alias","Arabidopsis thaliana","Uncharacterized protein At4g33666 [Source:UniProtKB/TrEMBL;Acc:Q94AJ7]","protein_coding" "At5g11700","No alias","Arabidopsis thaliana","LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteri /.../ Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). [Source:TAIR;Acc:AT5G11700]","protein_coding" "At5g13090","No alias","Arabidopsis thaliana","Uncharacterized protein At5g13090 [Source:UniProtKB/TrEMBL;Acc:Q8H0Z9]","protein_coding" "At5g15600","No alias","Arabidopsis thaliana","Protein SPIRAL1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF22]","protein_coding" "At5g19530","No alias","Arabidopsis thaliana","Thermospermine synthase ACAULIS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7X6]","protein_coding" "At5g25190","No alias","Arabidopsis thaliana","Ethylene-responsive transcription factor ERF003 [Source:UniProtKB/Swiss-Prot;Acc:Q94AW5]","protein_coding" "At5g42070","No alias","Arabidopsis thaliana","Uncharacterized protein At5g42070 [Source:UniProtKB/TrEMBL;Acc:Q8RWR9]","protein_coding" "At5g44190","No alias","Arabidopsis thaliana","Transcription activator GLK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH0]","protein_coding" "At5g44530","No alias","Arabidopsis thaliana","Subtilase family protein [Source:TAIR;Acc:AT5G44530]","protein_coding" "At5g47390","No alias","Arabidopsis thaliana","Transcription factor KUA1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVS0]","protein_coding" "At5g48490","No alias","Arabidopsis thaliana","At5g48490 [Source:UniProtKB/TrEMBL;Acc:Q9LV65]","protein_coding" "At5g48930","No alias","Arabidopsis thaliana","Shikimate O-hydroxycinnamoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI78]","protein_coding" "At5g49480","No alias","Arabidopsis thaliana","Calcium-binding protein CP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FDX6]","protein_coding" "At5g51030","No alias","Arabidopsis thaliana","At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]","protein_coding" "At5g53200","No alias","Arabidopsis thaliana","TRY [Source:UniProtKB/TrEMBL;Acc:A0A178UFU9]","protein_coding" "At5g58350","No alias","Arabidopsis thaliana","Probable serine/threonine-protein kinase WNK4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL5]","protein_coding" "At5g58870","No alias","Arabidopsis thaliana","Ftsh9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAY0]","protein_coding" "At5g59780","No alias","Arabidopsis thaliana","Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]","protein_coding" "At5g61670","No alias","Arabidopsis thaliana","Protein ORANGE, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF4]","protein_coding" "At5g62570","No alias","Arabidopsis thaliana","Calmodulin binding protein-like [Source:TAIR;Acc:AT5G62570]","protein_coding" "At5g64940","No alias","Arabidopsis thaliana","Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Y08]","protein_coding" "Bradi1g02400","No alias","Brachypodium distachyon","Mitochondrial transcription termination factor family protein","protein_coding" "Bradi1g07560","No alias","Brachypodium distachyon","Oxidoreductase family protein","protein_coding" "Bradi1g15350","No alias","Brachypodium distachyon","Inositol monophosphatase family protein","protein_coding" "Bradi1g16580","No alias","Brachypodium distachyon","fatty acid desaturase 8","protein_coding" "Bradi1g16670","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding" "Bradi1g19270","No alias","Brachypodium distachyon","B-S glucosidase 44","protein_coding" "Bradi1g27478","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g27481","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g29590","No alias","Brachypodium distachyon","PHYTOENE SYNTHASE","protein_coding" "Bradi1g33640","No alias","Brachypodium distachyon","S-locus lectin protein kinase family protein","protein_coding" "Bradi1g37480","No alias","Brachypodium distachyon","GATA type zinc finger transcription factor family protein","protein_coding" "Bradi1g43800","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi1g58220","No alias","Brachypodium distachyon","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "Bradi1g59860","No alias","Brachypodium distachyon","sulfoquinovosyldiacylglycerol 2","protein_coding" "Bradi1g60100","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi1g75950","No alias","Brachypodium distachyon","S-locus lectin protein kinase family protein","protein_coding" "Bradi1g76140","No alias","Brachypodium distachyon","serine acetyltransferase 3;2","protein_coding" "Bradi2g04530","No alias","Brachypodium distachyon","Putative thiol-disulphide oxidoreductase DCC","protein_coding" "Bradi2g23200","No alias","Brachypodium distachyon","Protein-tyrosine phosphatase-like, PTPLA","protein_coding" "Bradi2g58806","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi2g61830","No alias","Brachypodium distachyon","Glycosyl hydrolases family 32 protein","protein_coding" "Bradi3g02270","No alias","Brachypodium distachyon","cell division control 2","protein_coding" "Bradi3g15500","No alias","Brachypodium distachyon","diacylglycerol kinase 5","protein_coding" "Bradi3g17930","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi3g20520","No alias","Brachypodium distachyon","Translation initiation factor 2, small GTP-binding protein","protein_coding" "Bradi3g36930","No alias","Brachypodium distachyon","aldehyde dehydrogenase 11A3","protein_coding" "Bradi3g39040","No alias","Brachypodium distachyon","peptide transporter 2","protein_coding" "Bradi3g39800","No alias","Brachypodium distachyon","tonoplast dicarboxylate transporter","protein_coding" "Bradi3g47550","No alias","Brachypodium distachyon","phosphate transporter 2;1","protein_coding" "Bradi3g52290","No alias","Brachypodium distachyon","oligopeptide transporter 4","protein_coding" "Bradi3g52367","No alias","Brachypodium distachyon","AAA-type ATPase family protein","protein_coding" "Bradi3g53907","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Bradi3g59040","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding" "Bradi4g06017","No alias","Brachypodium distachyon","Function unknown","protein_coding" "Bradi4g09125","No alias","Brachypodium distachyon","rubisco activase","protein_coding" "Bradi4g20500","No alias","Brachypodium distachyon","enzyme binding;tetrapyrrole binding","protein_coding" "Bradi4g27440","No alias","Brachypodium distachyon","BRI1 like","protein_coding" "Bradi4g31970","No alias","Brachypodium distachyon","Histone H3 K4-specific methyltransferase SET7/9 family protein","protein_coding" "Bradi4g44838","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding" "Bradi4g45037","No alias","Brachypodium distachyon","fatty acid desaturase 8","protein_coding" "Bradi5g01950","No alias","Brachypodium distachyon","Pseudouridine synthase/archaeosine transglycosylase-like family protein","protein_coding" "Bradi5g08820","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Bradi5g11750","No alias","Brachypodium distachyon","zeaxanthin epoxidase (ZEP) (ABA1)","protein_coding" "Bradi5g20980","No alias","Brachypodium distachyon","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding" "Brara.A01293.1","No alias","Brassica rapa","magnesium dechelatase *(SGR)","protein_coding" "Brara.A01393.1","No alias","Brassica rapa","component *(NdhS) of NDH electron donor-binding subcomplex E","protein_coding" "Brara.A01441.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01671.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01818.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A01995.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding" "Brara.A02002.1","No alias","Brassica rapa","abscisic acid UDP-glycosyltransferase & EC_2.4 glycosyltransferase","protein_coding" "Brara.A02084.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A02119.1","No alias","Brassica rapa","component *(PsbO/OEC33) of PS-II oxygen-evolving center","protein_coding" "Brara.A02367.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding" "Brara.A02528.1","No alias","Brassica rapa","regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex","protein_coding" "Brara.A02760.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding" "Brara.A03160.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.A03913.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00043.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00629.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00725.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding" "Brara.B01151.1","No alias","Brassica rapa","MAP3K-WNK protein kinase & EC_2.7 transferase transferring phosphorus-containing group & telomeric dsDNA-binding protein","protein_coding" "Brara.B01167.1","No alias","Brassica rapa","phototropin photoreceptor & AGC-VIII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.B01177.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01748.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B01807.1","No alias","Brassica rapa","adaptor component *(ClpS) of chloroplast Clp-type protease complex","protein_coding" "Brara.B02362.1","No alias","Brassica rapa","methylation reader *(ECT)","protein_coding" "Brara.B02528.1","No alias","Brassica rapa","EC_3.2 glycosylase & glucosylceramidase *(GCD)","protein_coding" "Brara.B02773.1","No alias","Brassica rapa","GARP subgroup GLK transcription factor","protein_coding" "Brara.B03250.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03291.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03675.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03694.1","No alias","Brassica rapa","calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL)","protein_coding" "Brara.B03885.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03917.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03918.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00117.1","No alias","Brassica rapa","nucleobase cation transporter *(PLUTO)","protein_coding" "Brara.C00861.1","No alias","Brassica rapa","effector receptor *(NLR)","protein_coding" "Brara.C01127.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding" "Brara.C01364.1","No alias","Brassica rapa","caffeic acid O-methyltransferase *(COMT) & EC_2.1 transferase transferring one-carbon group","protein_coding" "Brara.C01984.1","No alias","Brassica rapa","calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C02027.1","No alias","Brassica rapa","ATP-dependent activase involved in RuBisCo regulation","protein_coding" "Brara.C02328.1","No alias","Brassica rapa","regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & component *(SPA) of substrate adaptor module of CUL4-based ubiquitin ligase complex","protein_coding" "Brara.C02530.1","No alias","Brassica rapa","MAP3K-RAF protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C02782.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C02918.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding" "Brara.C02957.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C03874.1","No alias","Brassica rapa","MAP3K-WNK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.C04111.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C04135.1","No alias","Brassica rapa","plastid division ARC5-recruitment factor *(PDV)","protein_coding" "Brara.D00005.1","No alias","Brassica rapa","carotenoid cleavage dioxygenase *(CCD1) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)","protein_coding" "Brara.D00734.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D00820.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D01177.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding" "Brara.D01306.1","No alias","Brassica rapa","EC_5.5 intramolecular lyase & myo-inositol-1-phosphate synthase *(MIPS)","protein_coding" "Brara.D02023.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02155.1","No alias","Brassica rapa","phosphatidylglycerophosphate phosphatase *(PTPMT)","protein_coding" "Brara.D02244.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02409.1","No alias","Brassica rapa","ATP-dependent activase involved in RuBisCo regulation","protein_coding" "Brara.D02777.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding" "Brara.E00045.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding" "Brara.E00537.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding" "Brara.E00787.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding" "Brara.E00828.1","No alias","Brassica rapa","transport protein *(TSUP)","protein_coding" "Brara.E00913.1","No alias","Brassica rapa","regulatory protein *(BCM) of chlorophyll homeostasis","protein_coding" "Brara.E00962.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding" "Brara.E01281.1","No alias","Brassica rapa","phototropin signalling factor *(RPT2)","protein_coding" "Brara.E01585.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01751.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E01764.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & granule-bound starch (amylose) synthase *(GBSS)","protein_coding" "Brara.E02053.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding" "Brara.E02474.1","No alias","Brassica rapa","plastidial transcript stability factor *(HCF107)","protein_coding" "Brara.E02805.1","No alias","Brassica rapa","methylation reader *(ECT)","protein_coding" "Brara.E02893.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E03181.1","No alias","Brassica rapa","ABC1 atypical protein kinase","protein_coding" "Brara.E03258.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E03281.1","No alias","Brassica rapa","regulatory protein of RNA homeostasis","protein_coding" "Brara.E03323.1","No alias","Brassica rapa","peroxisomal long-chain acyl-CoA synthetase & EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "Brara.F00159.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F00256.1","No alias","Brassica rapa","component *(PsbTn) of PS-II complex","protein_coding" "Brara.F00562.1","No alias","Brassica rapa","monosaccharide transporter *(ERD6)","protein_coding" "Brara.F00585.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding" "Brara.F00606.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01079.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01211.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01395.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding" "Brara.F01740.1","No alias","Brassica rapa","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Brara.F01761.1","No alias","Brassica rapa","organic phosphate/glycerol-3-phosphate permease *(G3P)","protein_coding" "Brara.F01958.1","No alias","Brassica rapa","regulatory protein *(BIC) of cryptochrome signalling","protein_coding" "Brara.F02021.1","No alias","Brassica rapa","nitrilase & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding" "Brara.F02405.1","No alias","Brassica rapa","metabolite transporter *(DTX)","protein_coding" "Brara.F02558.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F02635.1","No alias","Brassica rapa","basal Sigma-type transcription factor","protein_coding" "Brara.F03266.1","No alias","Brassica rapa","phosphate transporter *(PHT2)","protein_coding" "Brara.G00016.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G00425.1","No alias","Brassica rapa","component *(NdhV) of NDH electron donor-binding subcomplex E","protein_coding" "Brara.G01023.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G01093.1","No alias","Brassica rapa","NLP-type transcription factor & transcription factor *(NIN)","protein_coding" "Brara.G01194.1","No alias","Brassica rapa","substrate adaptor of SCF E3 ubiquitin ligase complex","protein_coding" "Brara.G01467.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02085.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)","protein_coding" "Brara.G02088.1","No alias","Brassica rapa","methylation reader *(ECT)","protein_coding" "Brara.G02097.1","No alias","Brassica rapa","component *(PsbR) of PS-II complex","protein_coding" "Brara.G02225.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding" "Brara.G02306.1","No alias","Brassica rapa","alpha dioxygenase & alpha dioxygenase *(DOX)","protein_coding" "Brara.G02379.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G02444.1","No alias","Brassica rapa","xyloglucan O-acetyltransferase *(AXY4)","protein_coding" "Brara.G02643.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G03349.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding" "Brara.G03377.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.G03554.1","No alias","Brassica rapa","substrate adaptor of CUL4-based E3 ubiquitin ligase complex","protein_coding" "Brara.G03570.1","No alias","Brassica rapa","regulatory protein *(MASP) of microtubule dynamics","protein_coding" "Brara.G03590.1","No alias","Brassica rapa","solanesyl diphosphate synthase *(SPS1/2) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Brara.G03703.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H00169.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H00539.1","No alias","Brassica rapa","glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding" "Brara.H00805.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding" "Brara.H01162.1","No alias","Brassica rapa","catalase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding" "Brara.H01415.1","No alias","Brassica rapa","NADPH","protein_coding" "Brara.H01891.1","No alias","Brassica rapa","component *(PsaK) of PS-I complex","protein_coding" "Brara.H01976.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H02072.1","No alias","Brassica rapa","E3 ubiquitin ligase","protein_coding" "Brara.H02379.1","No alias","Brassica rapa","ARF-type transcription factor & auxin signal mediator *(ARF7/ARF19)","protein_coding" "Brara.H03032.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00256.1","No alias","Brassica rapa","phosphate transporter *(PHT2)","protein_coding" "Brara.I00851.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I00904.1","No alias","Brassica rapa","endo-beta-1,4-mannanase","protein_coding" "Brara.I01378.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I01446.1","No alias","Brassica rapa","flavin-containing monooxygenase","protein_coding" "Brara.I01655.1","No alias","Brassica rapa","glutamyl-tRNA reductase *(HEMA) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding" "Brara.I02507.1","No alias","Brassica rapa","component *(NdhT) of NDH electron donor-binding subcomplex E","protein_coding" "Brara.I03090.1","No alias","Brassica rapa","anion channel *(QUAC/ALMT)","protein_coding" "Brara.I03237.1","No alias","Brassica rapa","lipid droplet-associated hydrolase *(LDAH)","protein_coding" "Brara.I03246.1","No alias","Brassica rapa","glutamate-glyoxylate transaminase & EC_2.6 transferase transferring nitrogenous group","protein_coding" "Brara.I03476.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I03632.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding" "Brara.I03871.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I04076.1","No alias","Brassica rapa","accessory component *(GUN4) of magnesium-chelatase complex","protein_coding" "Brara.I04533.1","No alias","Brassica rapa","nicotinate phosphoribosyltransferase *(NAPRT) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding" "Brara.I04953.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Brara.I05228.1","No alias","Brassica rapa","class tau glutathione S-transferase","protein_coding" "Brara.I05502.1","No alias","Brassica rapa","transcriptional repressor *(IAA/AUX)","protein_coding" "Brara.I05582.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00089.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00265.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J00737.1","No alias","Brassica rapa","iron-sulfur-cluster assembly transfer factor *(NEET)","protein_coding" "Brara.J00891.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.J01261.1","No alias","Brassica rapa","dehydro-dolichyl diphosphate synthase *(DPS)","protein_coding" "Brara.J01267.1","No alias","Brassica rapa","component *(FtsH7/9) of FtsH plastidial protease complexes","protein_coding" "Brara.J02304.1","No alias","Brassica rapa","mechanosensitive ion channel *(MSL)","protein_coding" "Brara.K00314.1","No alias","Brassica rapa","catalase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding" "Brara.K00337.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding" "Brara.K00482.1","No alias","Brassica rapa","regulatory protein *(BCM) of chlorophyll homeostasis","protein_coding" "Brara.K00928.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding" "Cre01.g003541","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g003800","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre01.g003826","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g007450","No alias","Chlamydomonas reinhardtii","S-adenosylmethionine carrier 2","protein_coding" "Cre01.g009500","No alias","Chlamydomonas reinhardtii","calmodulin-domain protein kinase cdpk isoform 2","protein_coding" "Cre01.g010700","No alias","Chlamydomonas reinhardtii","Syntaxin/t-SNARE family protein","protein_coding" "Cre01.g010950","No alias","Chlamydomonas reinhardtii","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding" "Cre01.g012200","No alias","Chlamydomonas reinhardtii","squamosa promoter-binding protein-like 12","protein_coding" "Cre01.g014500","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre01.g015400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g023400","No alias","Chlamydomonas reinhardtii","LMBR1-like membrane protein","protein_coding" "Cre01.g025050","No alias","Chlamydomonas reinhardtii","GATA transcription factor 9","protein_coding" "Cre01.g025850","No alias","Chlamydomonas reinhardtii","myo-inositol oxygenase 1","protein_coding" "Cre01.g026016","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g026050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g034150","No alias","Chlamydomonas reinhardtii","Na+/H+ exchanger 8","protein_coding" "Cre01.g038100","No alias","Chlamydomonas reinhardtii","Bestrophin-like protein","protein_coding" "Cre01.g043850","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre01.g046237","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Cre01.g046600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g051482","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre01.g054050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g074437","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g074737","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g074758","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g080750","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 1","protein_coding" "Cre02.g083500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g086326","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g088350","No alias","Chlamydomonas reinhardtii","SNARE associated Golgi protein family","protein_coding" "Cre02.g090150","No alias","Chlamydomonas reinhardtii","homolog of bacterial PANC","protein_coding" "Cre02.g092750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g095068","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g095117","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre02.g097800","No alias","Chlamydomonas reinhardtii","multidrug resistance-associated protein 2","protein_coding" "Cre02.g098750","No alias","Chlamydomonas reinhardtii","STELAR K+ outward rectifier","protein_coding" "Cre02.g108350","No alias","Chlamydomonas reinhardtii","myb domain protein 1","protein_coding" "Cre02.g109250","No alias","Chlamydomonas reinhardtii","Radical SAM superfamily protein","protein_coding" "Cre02.g111550","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre02.g113626","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g115508","No alias","Chlamydomonas reinhardtii","plant intracellular ras group-related LRR 2","protein_coding" "Cre02.g116100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g141146","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g142226","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre02.g142627","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g143350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g144600","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre02.g144650","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre02.g144700","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre02.g144734","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g144750","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre02.g144950","No alias","Chlamydomonas reinhardtii","K+ transporter 1","protein_coding" "Cre02.g145500","No alias","Chlamydomonas reinhardtii","Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre02.g145502","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g145600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre02.g146100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g144524","No alias","Chlamydomonas reinhardtii","Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3","protein_coding" "Cre03.g145927","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 16","protein_coding" "Cre03.g146087","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g154250","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre03.g155900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g157400","No alias","Chlamydomonas reinhardtii","gated outwardly-rectifying K+ channel","protein_coding" "Cre03.g157600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g159800","No alias","Chlamydomonas reinhardtii","RELA/SPOT homolog 3","protein_coding" "Cre03.g160750","No alias","Chlamydomonas reinhardtii","Cation efflux family protein","protein_coding" "Cre03.g161850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g161900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g162800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g165250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g172451","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g173450","No alias","Chlamydomonas reinhardtii","ACD1-like","protein_coding" "Cre03.g175650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g177700","No alias","Chlamydomonas reinhardtii","Plant regulator RWP-RK family protein","protein_coding" "Cre03.g179750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g182200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g184450","No alias","Chlamydomonas reinhardtii","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding" "Cre03.g188250","No alias","Chlamydomonas reinhardtii","ADP glucose pyrophosphorylase 1","protein_coding" "Cre03.g193400","No alias","Chlamydomonas reinhardtii","RNApolymerase sigma subunit 2","protein_coding" "Cre03.g193600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g202900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g202950","No alias","Chlamydomonas reinhardtii","EF hand calcium-binding protein family","protein_coding" "Cre03.g206201","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g206351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre03.g207750","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat protein kinase family protein","protein_coding" "Cre03.g210849","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre03.g211073","No alias","Chlamydomonas reinhardtii","Protein phosphatase 2C family protein","protein_coding" "Cre04.g213761","No alias","Chlamydomonas reinhardtii","Thioesterase superfamily protein","protein_coding" "Cre04.g215250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g217951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g217991","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g219350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre04.g219400","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with ABF2","protein_coding" "Cre04.g223100","No alias","Chlamydomonas reinhardtii","alpha carbonic anhydrase 4","protein_coding" "Cre04.g224450","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre04.g225250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g233551","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 9","protein_coding" "Cre05.g234976","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g235500","No alias","Chlamydomonas reinhardtii","Kinesin motor family protein","protein_coding" "Cre05.g236650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g238500","No alias","Chlamydomonas reinhardtii","Radical SAM superfamily protein","protein_coding" "Cre05.g240850","No alias","Chlamydomonas reinhardtii","thiaminC","protein_coding" "Cre05.g248400","No alias","Chlamydomonas reinhardtii","beta carbonic anhydrase 6","protein_coding" "Cre05.g248450","No alias","Chlamydomonas reinhardtii","beta carbonic anhydrase 6","protein_coding" "Cre06.g255200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g259600","No alias","Chlamydomonas reinhardtii","Membrane trafficking VPS53 family protein","protein_coding" "Cre06.g259750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g270500","No alias","Chlamydomonas reinhardtii","glycosyl hydrolase 9C3","protein_coding" "Cre06.g273100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g274550","No alias","Chlamydomonas reinhardtii","protein kinase family protein / protein phosphatase 2C ( PP2C) family protein","protein_coding" "Cre06.g278142","No alias","Chlamydomonas reinhardtii","Methylthiotransferase","protein_coding" "Cre06.g278215","No alias","Chlamydomonas reinhardtii","beta-hydroxyisobutyryl-CoA hydrolase 1","protein_coding" "Cre06.g278298","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g282000","No alias","Chlamydomonas reinhardtii","starch synthase 3","protein_coding" "Cre06.g282250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g284000","No alias","Chlamydomonas reinhardtii","BSD domain-containing protein","protein_coding" "Cre06.g284550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g286450","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cre06.g290150","No alias","Chlamydomonas reinhardtii","Uncharacterised protein family UPF0090","protein_coding" "Cre06.g290450","No alias","Chlamydomonas reinhardtii","RNA-binding protein-defense related 1","protein_coding" "Cre06.g299800","No alias","Chlamydomonas reinhardtii","AMP-dependent synthetase and ligase family protein","protein_coding" "Cre06.g301350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g301450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g301900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g304750","No alias","Chlamydomonas reinhardtii","ARF-GAP domain 5","protein_coding" "Cre06.g307012","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre06.g310450","No alias","Chlamydomonas reinhardtii","Cyclin-like family protein","protein_coding" "Cre06.g311550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g313000","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding" "Cre07.g315950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g316526","No alias","Chlamydomonas reinhardtii","Myzus persicae-induced lipase 1","protein_coding" "Cre07.g319350","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre07.g321951","No alias","Chlamydomonas reinhardtii","natural resistance-associated macrophage protein 1","protein_coding" "Cre07.g323550","No alias","Chlamydomonas reinhardtii","pseudouridine synthase family protein","protein_coding" "Cre07.g325740","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre07.g325741","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre07.g325759","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre07.g329100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g335050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g335150","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 4","protein_coding" "Cre07.g335200","No alias","Chlamydomonas reinhardtii","elongation factor family protein","protein_coding" "Cre07.g344100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g344771","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g346500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre07.g349000","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre07.g355300","No alias","Chlamydomonas reinhardtii","Bestrophin-like protein","protein_coding" "Cre08.g358350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g364800","No alias","Chlamydomonas reinhardtii","purine biosynthesis 4","protein_coding" "Cre08.g367400","No alias","Chlamydomonas reinhardtii","chlorophyll A/B binding protein 1","protein_coding" "Cre08.g367500","No alias","Chlamydomonas reinhardtii","chlorophyll A/B binding protein 1","protein_coding" "Cre08.g367900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g370200","No alias","Chlamydomonas reinhardtii","trithorax-like protein 2","protein_coding" "Cre08.g371052","No alias","Chlamydomonas reinhardtii","inositol requiring 1-1","protein_coding" "Cre08.g373300","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre08.g373840","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g374950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g378850","No alias","Chlamydomonas reinhardtii","Phosphoribosyltransferase family protein","protein_coding" "Cre08.g381450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g383500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g383800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre08.g384150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g386745","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g387000","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF3411)","protein_coding" "Cre09.g388504","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g388689","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre09.g390152","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g392208","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g393050","No alias","Chlamydomonas reinhardtii","protein arginine methyltransferase 7","protein_coding" "Cre09.g393650","No alias","Chlamydomonas reinhardtii","PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre09.g394400","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre09.g394700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g396200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g396252","No alias","Chlamydomonas reinhardtii","glutathione reductase","protein_coding" "Cre09.g396624","No alias","Chlamydomonas reinhardtii","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding" "Cre09.g396850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g396950","No alias","Chlamydomonas reinhardtii","phosphate transporter 4;5","protein_coding" "Cre09.g397919","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre09.g399200","No alias","Chlamydomonas reinhardtii","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding" "Cre09.g399914","No alias","Chlamydomonas reinhardtii","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Cre09.g409350","No alias","Chlamydomonas reinhardtii","RNAse l inhibitor protein 2","protein_coding" "Cre10.g418500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g420450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g421550","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 9","protein_coding" "Cre10.g423550","No alias","Chlamydomonas reinhardtii","threonine aldolase 2","protein_coding" "Cre10.g425350","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat protein kinase family protein","protein_coding" "Cre10.g428000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g429450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g429500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g430300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g437800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g441200","No alias","Chlamydomonas reinhardtii","LA RNA-binding protein","protein_coding" "Cre10.g443950","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre10.g444000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g445700","No alias","Chlamydomonas reinhardtii","protein tyrosine kinase family protein","protein_coding" "Cre10.g451250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g458350","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase family protein with chitinase insertion domain","protein_coding" "Cre10.g462500","No alias","Chlamydomonas reinhardtii","Pseudouridine synthase family protein","protein_coding" "Cre10.g465200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre10.g466350","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre11.g467649","No alias","Chlamydomonas reinhardtii","RAP","protein_coding" "Cre11.g467673","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre11.g476250","No alias","Chlamydomonas reinhardtii","Zinc finger, C3HC4 type (RING finger) family protein","protein_coding" "Cre11.g479600","No alias","Chlamydomonas reinhardtii","magnesium/proton exchanger","protein_coding" "Cre12.g484500","No alias","Chlamydomonas reinhardtii","ankyrin repeat family protein","protein_coding" "Cre12.g489400","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre12.g491600","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre12.g492150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g493300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g493404","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre12.g495953","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre12.g501600","No alias","Chlamydomonas reinhardtii","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding" "Cre12.g505650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g506600","No alias","Chlamydomonas reinhardtii","phosphatidic acid phosphohydrolase 2","protein_coding" "Cre12.g507550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g511600","No alias","Chlamydomonas reinhardtii","stomatal cytokinesis defective / SCD1 protein (SCD1)","protein_coding" "Cre12.g516400","No alias","Chlamydomonas reinhardtii","YTH family protein","protein_coding" "Cre12.g519000","No alias","Chlamydomonas reinhardtii","phosphoribosylanthranilate isomerase 1","protein_coding" "Cre12.g520000","No alias","Chlamydomonas reinhardtii","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding" "Cre12.g520100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g520700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g527000","No alias","Chlamydomonas reinhardtii","calcium-dependent protein kinase 34","protein_coding" "Cre12.g529250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g532000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g533700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g536050","No alias","Chlamydomonas reinhardtii","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding" "Cre12.g536750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g552550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre12.g553900","No alias","Chlamydomonas reinhardtii","potassium transport 2/3","protein_coding" "Cre12.g559400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g562150","No alias","Chlamydomonas reinhardtii","GTP-binding protein-related","protein_coding" "Cre13.g564500","No alias","Chlamydomonas reinhardtii","calcium-dependent protein kinase 2","protein_coding" "Cre13.g566450","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre13.g568550","No alias","Chlamydomonas reinhardtii","protein-serine kinase 1","protein_coding" "Cre13.g571450","No alias","Chlamydomonas reinhardtii","membrane-associated progesterone binding protein 2","protein_coding" "Cre13.g573550","No alias","Chlamydomonas reinhardtii","Ankyrin repeat family protein","protein_coding" "Cre13.g576650","No alias","Chlamydomonas reinhardtii","histidine biosynthesis bifunctional protein (HISIE)","protein_coding" "Cre13.g583972","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g590600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g591350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g601519","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre13.g604950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre14.g608452","No alias","Chlamydomonas reinhardtii","ubiquitin-specific protease 22","protein_coding" "Cre14.g610550","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with ABF2","protein_coding" "Cre14.g613426","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre14.g613501","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre14.g616750","No alias","Chlamydomonas reinhardtii","peroxin 5","protein_coding" "Cre14.g619350","No alias","Chlamydomonas reinhardtii","AFG1-like ATPase family protein","protein_coding" "Cre14.g620150","No alias","Chlamydomonas reinhardtii","Peptidase family M48 family protein","protein_coding" "Cre14.g623403","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre14.g626350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre15.g637150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre15.g639504","No alias","Chlamydomonas reinhardtii","XB3 ortholog 1 in Arabidopsis thaliana","protein_coding" "Cre15.g643740","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g649000","No alias","Chlamydomonas reinhardtii","protein tyrosine kinase family protein","protein_coding" "Cre16.g649550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g651350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g651400","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre16.g653300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g653400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g653800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g655200","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre16.g666200","No alias","Chlamydomonas reinhardtii","Protein kinase family protein","protein_coding" "Cre16.g671850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g675150","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding" "Cre16.g676757","No alias","Chlamydomonas reinhardtii","phosphate transporter 2;1","protein_coding" "Cre16.g679893","No alias","Chlamydomonas reinhardtii","Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre16.g681850","No alias","Chlamydomonas reinhardtii","uridine kinase-like 5","protein_coding" "Cre16.g682369","No alias","Chlamydomonas reinhardtii","heavy metal atpase 5","protein_coding" "Cre16.g683750","No alias","Chlamydomonas reinhardtii","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding" "Cre16.g684900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g685053","No alias","Chlamydomonas reinhardtii","SART-1 family","protein_coding" "Cre16.g687700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g689500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre16.g692500","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 10","protein_coding" "Cre16.g693203","No alias","Chlamydomonas reinhardtii","pleiotropic drug resistance 13","protein_coding" "Cre16.g694450","No alias","Chlamydomonas reinhardtii","Molecular chaperone Hsp40/DnaJ family protein","protein_coding" "Cre16.g694809","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g701950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g704150","No alias","Chlamydomonas reinhardtii","PLC-like phosphodiesterases superfamily protein","protein_coding" "Cre17.g720300","No alias","Chlamydomonas reinhardtii","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "Cre17.g721450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g721950","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre17.g725200","No alias","Chlamydomonas reinhardtii","P-glycoprotein 21","protein_coding" "Cre17.g731581","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre17.g739100","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre17.g742000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre18.g749447","No alias","Chlamydomonas reinhardtii","aspartate kinase-homoserine dehydrogenase ii","protein_coding" "Cre18.g749647","No alias","Chlamydomonas reinhardtii","Glycinamide ribonucleotide (GAR) synthetase","protein_coding" "Cre27.g757147","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "evm.model.contig_2009.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2015.1","No alias","Porphyridium purpureum","(at2g46210 : 107.0) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2020.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2020.36","No alias","Porphyridium purpureum","(at3g26570 : 107.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2021.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2025.64","No alias","Porphyridium purpureum","(at3g26570 : 229.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "evm.model.contig_2033.16","No alias","Porphyridium purpureum","(at4g36400 : 461.0) Encodes a (D)-2-hydroxyglutarate dehydrogenase.; FAD-linked oxidases family protein; FUNCTIONS IN: electron carrier activity, (R)-2-hydroxyglutarate dehydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase, C-terminal (InterPro:IPR004113), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167); BEST Arabidopsis thaliana protein match is: FAD-linked oxidases family protein (TAIR:AT5G06580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)","protein_coding" "evm.model.contig_2042.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2044.16","No alias","Porphyridium purpureum","(q9sbn4|pgkh_volca : 349.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 335.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (reliability: 670.0) & (original description: no original description)","protein_coding" "evm.model.contig_2051.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2052.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2070.15","No alias","Porphyridium purpureum","(at2g04660 : 235.0) a highly conserved ubiquitin-protein ligase involved in cell cycle regulation; anaphase-promoting complex/cyclosome 2 (APC2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cullin homology (InterPro:IPR016158), Anaphase promoting complex subunit 2 (InterPro:IPR014786), Cullin, N-terminal (InterPro:IPR001373); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1400 Blast hits to 1393 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 534; Fungi - 454; Plants - 255; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 470.0) & (original description: no original description)","protein_coding" "evm.model.contig_2070.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2071.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2073.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2077.10","No alias","Porphyridium purpureum","(at3g08640 : 110.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "evm.model.contig_2084.6","No alias","Porphyridium purpureum","(at3g49660 : 188.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p25387|gblp_chlre : 146.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 376.0) & (original description: no original description)","protein_coding" "evm.model.contig_2090.30","No alias","Porphyridium purpureum","(p56317|clpp_chlvu : 257.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (atcg00670 : 207.0) Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001).; plastid-encoded CLP P (PCLPP); FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane, chloroplastic endopeptidase Clp complex, plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 2 (TAIR:AT1G12410.1). & (reliability: 414.0) & (original description: no original description)","protein_coding" "evm.model.contig_2090.39","No alias","Porphyridium purpureum","(at3g26570 : 230.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)","protein_coding" "evm.model.contig_2092.15","No alias","Porphyridium purpureum","(at3g26570 : 120.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)","protein_coding" "evm.model.contig_2095.6","No alias","Porphyridium purpureum","(at5g02860 : 174.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink). & (q76c99|rf1_orysa : 159.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 348.0) & (original description: no original description)","protein_coding" "evm.model.contig_2096.15","No alias","Porphyridium purpureum","(at1g36050 : 288.0) Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (reliability: 576.0) & (original description: no original description)","protein_coding" "evm.model.contig_2099.5","No alias","Porphyridium purpureum","(at3g26570 : 107.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "evm.model.contig_2108.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2111.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2113.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2114.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2139.11","No alias","Porphyridium purpureum","(at3g26570 : 182.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.contig_2142.8","No alias","Porphyridium purpureum","(p31023|dldh_pea : 596.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (at1g48030 : 594.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (reliability: 1188.0) & (original description: no original description)","protein_coding" "evm.model.contig_2165.4","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2174.1","No alias","Porphyridium purpureum","(p41918|rana1_tobac : 303.0) GTP-binding nuclear protein Ran-A1 - Nicotiana tabacum (Common tobacco) & (at5g20010 : 300.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAS-related nuclear protein-1 (RAN-1); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, response to salt stress, protein import into nucleus; LOCATED IN: apoplast, cell wall, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAN GTPase 3 (TAIR:AT5G55190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) & (original description: no original description)","protein_coding" "evm.model.contig_2174.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2190.2","No alias","Porphyridium purpureum","(p16081|nia1_orysa : 776.0) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) - Oryza sativa (Rice) & (at1g77760 : 752.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (reliability: 1504.0) & (original description: no original description)","protein_coding" "evm.model.contig_2197.1","No alias","Porphyridium purpureum","(at1g31770 : 177.0) ATP-binding cassette 14 (ABCG14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 394116 Blast hits to 359785 proteins in 4146 species: Archae - 7090; Bacteria - 311308; Metazoa - 8766; Fungi - 6614; Plants - 5656; Viruses - 7; Other Eukaryotes - 54675 (source: NCBI BLink). & (q8gu86|pdr5_orysa : 122.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (reliability: 354.0) & (original description: no original description)","protein_coding" "evm.model.contig_2221.1","No alias","Porphyridium purpureum","(at3g26570 : 99.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)","protein_coding" "evm.model.contig_2262.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2262.2","No alias","Porphyridium purpureum","(at5g22100 : 276.0) RNA cyclase family protein; FUNCTIONS IN: RNA-3'-phosphate cyclase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA 3'-terminal phosphate cyclase-like, conserved site (InterPro:IPR020719), RNA 3'-terminal phosphate cyclase-like (InterPro:IPR000228), RNA 3'-terminal phosphate cyclase, insert domain (InterPro:IPR013796), RNA 3'-terminal phosphate cyclase-like, eukaryotic (InterPro:IPR016443), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)","protein_coding" "evm.model.contig_2275.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2276.12","No alias","Porphyridium purpureum","(at3g26570 : 121.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 242.0) & (original description: no original description)","protein_coding" "evm.model.contig_2284.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2285.8","No alias","Porphyridium purpureum","(p00074|cyc_ginbi : 153.0) Cytochrome c - Ginkgo biloba (Ginkgo) & (at1g22840 : 146.0) Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.; CYTOCHROME C-1 (CYTC-1); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: cell proliferation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: cytochrome c-2 (TAIR:AT4G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "evm.model.contig_2286.13","No alias","Porphyridium purpureum","(at2g31955 : 358.0) COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.; cofactor of nitrate reductase and xanthine dehydrogenase 2 (CNX2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Molybdenum cofactor synthesis C-terminal (InterPro:IPR010505), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Molybdenum cofactor biosynthesis protein A (InterPro:IPR013483), Radical SAM (InterPro:IPR007197), MoaA/nifB/pqqE, iron-sulphur binding, conserved site (InterPro:IPR000385). & (reliability: 716.0) & (original description: no original description)","protein_coding" "evm.model.contig_2292.8","No alias","Porphyridium purpureum","(at4g09730 : 239.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (p46942|db10_nicsy : 138.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 478.0) & (original description: no original description)","protein_coding" "evm.model.contig_2296.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2302.5","No alias","Porphyridium purpureum","(at1g34065 : 136.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.contig_2303.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2303.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2306.3","No alias","Porphyridium purpureum","(p46225|tpic_secce : 302.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 281.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "evm.model.contig_2333.1","No alias","Porphyridium purpureum","(at1g64780 : 255.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 510.0) & (original description: no original description)","protein_coding" "evm.model.contig_2340.7","No alias","Porphyridium purpureum","(at1g67420 : 168.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1). & (reliability: 336.0) & (original description: no original description)","protein_coding" "evm.model.contig_2347.7","No alias","Porphyridium purpureum","(at4g11160 : 330.0) Translation initiation factor 2, small GTP-binding protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT1G17220.1); Has 56805 Blast hits to 56771 proteins in 4188 species: Archae - 1161; Bacteria - 37207; Metazoa - 1733; Fungi - 1367; Plants - 871; Viruses - 1; Other Eukaryotes - 14465 (source: NCBI BLink). & (p57997|if2c_phavu : 298.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 660.0) & (original description: no original description)","protein_coding" "evm.model.contig_2349.12","No alias","Porphyridium purpureum","(at3g51270 : 243.0) protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1). & (reliability: 486.0) & (original description: no original description)","protein_coding" "evm.model.contig_2350.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2356.1","No alias","Porphyridium purpureum","(at3g26570 : 117.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)","protein_coding" "evm.model.contig_2444.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2480.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2494.21","No alias","Porphyridium purpureum","(at1g26761 : 159.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)","protein_coding" "evm.model.contig_2499.7","No alias","Porphyridium purpureum","(at1g34065 : 167.0) S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "evm.model.contig_2501.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2566.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_2695.9","No alias","Porphyridium purpureum","(at5g52540 : 148.0) Protein of unknown function (DUF819); LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF819 (InterPro:IPR008537); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF819) (TAIR:AT5G24000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)","protein_coding" "evm.model.contig_3384.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3385.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3391.6","No alias","Porphyridium purpureum","(at2g40840 : 448.0) Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose.; disproportionating enzyme 2 (DPE2); FUNCTIONS IN: 4-alpha-glucanotransferase activity, heteroglycan binding; INVOLVED IN: polysaccharide metabolic process, circadian rhythm, maltose catabolic process, maltose metabolic process, starch catabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, family 77 (InterPro:IPR003385), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: disproportionating enzyme (TAIR:AT5G64860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06801|dpep_soltu : 86.7) 4-alpha-glucanotransferase, chloroplast precursor (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (D-enzyme) - Solanum tuberosum (Potato) & (reliability: 896.0) & (original description: no original description)","protein_coding" "evm.model.contig_3392.13","No alias","Porphyridium purpureum","(at1g76050 : 85.5) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD (InterPro:IPR006225), Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.0) & (original description: no original description)","protein_coding" "evm.model.contig_3401.27","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3403.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3421.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3423.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3426.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3443.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3450.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3451.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3460.1","No alias","Porphyridium purpureum","(at2g43400 : 575.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (reliability: 1150.0) & (original description: no original description)","protein_coding" "evm.model.contig_3468.10","No alias","Porphyridium purpureum","(at5g42540 : 250.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing.; exoribonuclease 2 (XRN2); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: 5'-3' exoribonuclease 3 (TAIR:AT1G75660.1). & (reliability: 500.0) & (original description: no original description)","protein_coding" "evm.model.contig_3490.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3491.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3491.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3495.6","No alias","Porphyridium purpureum","(at3g22330 : 130.0) DEAD-box protein required for efficient group II intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (p46942|db10_nicsy : 122.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|68872 : 107.0) no description available & (reliability: 260.0) & (original description: no original description)","protein_coding" "evm.model.contig_3506.5","No alias","Porphyridium purpureum","(at5g63400 : 244.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (q08480|kad2_orysa : 240.0) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (reliability: 488.0) & (original description: no original description)","protein_coding" "evm.model.contig_3604.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3621.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_3656.2","No alias","Porphyridium purpureum","(at2g29690 : 465.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (reliability: 930.0) & (original description: no original description)","protein_coding" "evm.model.contig_3662.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_436.10","No alias","Porphyridium purpureum","(at2g39990 : 133.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (reliability: 266.0) & (original description: no original description)","protein_coding" "evm.model.contig_4399.1","No alias","Porphyridium purpureum","(at5g47010 : 213.0) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)","protein_coding" "evm.model.contig_4402.10","No alias","Porphyridium purpureum","(at1g25380 : 165.0) Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.; NAD+ transporter 2 (NDT2); FUNCTIONS IN: binding, NAD transporter activity; INVOLVED IN: transport, NAD transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: NAD+ transporter 1 (TAIR:AT2G47490.1); Has 30606 Blast hits to 14728 proteins in 470 species: Archae - 0; Bacteria - 8; Metazoa - 12581; Fungi - 9084; Plants - 5612; Viruses - 5; Other Eukaryotes - 3316 (source: NCBI BLink). & (p29518|bt1_maize : 99.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 330.0) & (original description: no original description)","protein_coding" "evm.model.contig_4404.19","No alias","Porphyridium purpureum","(at3g48160 : 167.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "evm.model.contig_4405.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4411.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4422.1","No alias","Porphyridium purpureum","(at2g44520 : 172.0) cytochrome c oxidase 10 (COX10); FUNCTIONS IN: protoheme IX farnesyltransferase activity, prenyltransferase activity; INVOLVED IN: heme o biosynthetic process, heme biosynthetic process; LOCATED IN: integral to membrane, mitochondrial membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protohaem IX farnesyltransferase, mitochondria (InterPro:IPR016315), Protohaem IX farnesyltransferase (InterPro:IPR006369), UbiA prenyltransferase (InterPro:IPR000537); Has 7990 Blast hits to 7990 proteins in 1845 species: Archae - 160; Bacteria - 4430; Metazoa - 177; Fungi - 179; Plants - 66; Viruses - 0; Other Eukaryotes - 2978 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)","protein_coding" "evm.model.contig_444.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4448.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4449.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4459.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4464.1","No alias","Porphyridium purpureum","(at3g11400 : 114.0) One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).; eukaryotic translation initiation factor 3G1 (EIF3G1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor 3, RNA-binding subunit (InterPro:IPR017334); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G2 (TAIR:AT5G06000.1); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "evm.model.contig_4467.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4469.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_4476.1","No alias","Porphyridium purpureum","(at1g72560 : 109.0) Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development.; PAUSED (PSD); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.contig_4491.13","No alias","Porphyridium purpureum","(at1g48175 : 92.0) embryo defective 2191 (emb2191); FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: tRNA arginine adenosine deaminase (TAIR:AT1G68720.1); Has 7475 Blast hits to 7473 proteins in 2425 species: Archae - 62; Bacteria - 5225; Metazoa - 126; Fungi - 224; Plants - 142; Viruses - 0; Other Eukaryotes - 1696 (source: NCBI BLink). & (reliability: 184.0) & (original description: no original description)","protein_coding" "evm.model.contig_4496.2","No alias","Porphyridium purpureum","(at3g54670 : 560.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (reliability: 1120.0) & (original description: no original description)","protein_coding" "evm.model.contig_4511.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_458.1","No alias","Porphyridium purpureum","(at3g23600 : 86.7) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description)","protein_coding" "evm.model.contig_4594.4","No alias","Porphyridium purpureum","(o65361|p5cs_mescr : 322.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 320.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 640.0) & (original description: no original description)","protein_coding" "evm.model.contig_4661.1","No alias","Porphyridium purpureum","(at3g26570 : 117.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)","protein_coding" "evm.model.contig_467.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_468.3","No alias","Porphyridium purpureum","(at5g66120 : 153.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "evm.model.contig_470.3","No alias","Porphyridium purpureum","(at4g36390 : 446.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 441.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 892.0) & (original description: no original description)","protein_coding" "evm.model.contig_491.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_496.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_506.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_510.13","No alias","Porphyridium purpureum","(at1g31340 : 120.0) Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.; related to ubiquitin 1 (RUB1); INVOLVED IN: protein modification process, response to auxin stimulus, protein neddylation, ethylene biosynthetic process, embryo development; LOCATED IN: plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 7 (TAIR:AT2G35635.1); Has 16064 Blast hits to 7349 proteins in 721 species: Archae - 0; Bacteria - 36; Metazoa - 7330; Fungi - 1879; Plants - 3570; Viruses - 331; Other Eukaryotes - 2918 (source: NCBI BLink). & (p0c031|rub2_orysa : 120.0) NEDD8-like protein RUB2 precursor (Ubiquitin-related protein 2) (OsRUB2) - Oryza sativa (Rice) & (reliability: 240.0) & (original description: no original description)","protein_coding" "evm.model.contig_510.18","No alias","Porphyridium purpureum","(p05434|catr_chlre : 123.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at5g37780 : 108.0) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.contig_516.3","No alias","Porphyridium purpureum","(at1g67730 : 87.8) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.contig_518.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_518.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_535.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_546.4","No alias","Porphyridium purpureum","(at1g22850 : 82.8) SNARE associated Golgi protein family; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4604 Blast hits to 4604 proteins in 1169 species: Archae - 23; Bacteria - 2889; Metazoa - 197; Fungi - 87; Plants - 283; Viruses - 0; Other Eukaryotes - 1125 (source: NCBI BLink). & (reliability: 165.6) & (original description: no original description)","protein_coding" "evm.model.contig_554.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_567.10","No alias","Porphyridium purpureum","(at5g14800 : 187.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (p17817|p5cr_soybn : 180.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Glycine max (Soybean) & (reliability: 374.0) & (original description: no original description)","protein_coding" "evm.model.contig_582.6","No alias","Porphyridium purpureum","(at5g49970 : 146.0) encodes the bifunctional pyridoxine (pyridoxamine) 5ÃÂ-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group); pyridoxin (pyrodoxamine) 5'-phosphate oxidase (PPOX); CONTAINS InterPro DOMAIN/s: Pyridoxamine 5'-phosphate oxidase, rossman domain-containing, predicted, plant (InterPro:IPR021198), YjeF-related protein, N-terminal (InterPro:IPR004443), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)","protein_coding" "evm.model.contig_597.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_621.1","No alias","Porphyridium purpureum","(at4g27420 : 138.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)","protein_coding" "evm.model.contig_653.6","No alias","Porphyridium purpureum","(q7xj02|apx7_orysa : 89.0) Probable L-ascorbate peroxidase 7, chloroplast precursor (EC 1.11.1.11) (OsAPx07) - Oryza sativa (Rice) & (at3g09640 : 85.9) Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 2 (APX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 1 (TAIR:AT1G07890.8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 171.8) & (original description: no original description)","protein_coding" "evm.model.contig_664.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_699.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_724.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_733.1","No alias","Porphyridium purpureum","(q9lre6|dpod1_orysa : 964.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 954.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 1908.0) & (original description: no original description)","protein_coding" "evm.model.contig_802.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding" "evm.model.contig_837.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_923.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000017.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000025.23","No alias","Cyanophora paradoxa","(at4g34350 : 261.0) Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 522.0) & (original description: no original description)","protein_coding" "evm.model.tig00000042.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.119","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.125","No alias","Cyanophora paradoxa","(at4g00450 : 87.8) Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.; CENTER CITY (CCT); FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: photoperiodism, flowering, regulation of development, heterochronic, regulation of radial pattern formation; LOCATED IN: mediator complex, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med12 (InterPro:IPR019035); Has 216 Blast hits to 184 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 65; Plants - 86; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.tig00000042.136","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.160","No alias","Cyanophora paradoxa","(at2g48060 : 83.2) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)","protein_coding" "evm.model.tig00000042.258","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.28","No alias","Cyanophora paradoxa","(at5g35750 : 150.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 124.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 300.0) & (original description: no original description)","protein_coding" "evm.model.tig00000042.9","No alias","Cyanophora paradoxa","(at5g65720 : 479.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 958.0) & (original description: no original description)","protein_coding" "evm.model.tig00000056.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000057.130","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000057.40","No alias","Cyanophora paradoxa","(at1g14000 : 87.8) Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.; VH1-interacting kinase (VIK); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G58760.1); Has 139285 Blast hits to 133759 proteins in 5118 species: Archae - 180; Bacteria - 15286; Metazoa - 53967; Fungi - 12530; Plants - 33711; Viruses - 527; Other Eukaryotes - 23084 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.tig00000057.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000073.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000073.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000076.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000076.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000076.66","No alias","Cyanophora paradoxa","(at3g21300 : 234.0) RNA methyltransferase family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), 23S rRNA methyltransferase/RumA (InterPro:IPR001566), (Uracil-5)-methyltransferase (InterPro:IPR010280), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G28450.2); Has 10349 Blast hits to 9632 proteins in 2576 species: Archae - 226; Bacteria - 8529; Metazoa - 196; Fungi - 218; Plants - 136; Viruses - 7; Other Eukaryotes - 1037 (source: NCBI BLink). & (reliability: 468.0) & (original description: no original description)","protein_coding" "evm.model.tig00000093.186","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.200","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000093.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000101.8","No alias","Cyanophora paradoxa","(at5g37510 : 273.0) Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte.; embryo defective 1467 (EMB1467); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to oxidative stress, photorespiration, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, mitochondrial membrane, chloroplast, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding (InterPro:IPR019574), NADH:ubiquinone oxidoreductase, subunit G (InterPro:IPR010228), Molybdopterin oxidoreductase (InterPro:IPR006656), Ferredoxin (InterPro:IPR001041), NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site (InterPro:IPR000283), NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43644|ndus1_soltu : 271.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (reliability: 546.0) & (original description: no original description)","protein_coding" "evm.model.tig00000104.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.61","No alias","Cyanophora paradoxa","(at3g19000 : 216.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q06942|fl3h_maldo : 139.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 432.0) & (original description: no original description)","protein_coding" "evm.model.tig00000113.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000113.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000114.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000117.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000128.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000128.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000137.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.198","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.205","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000145.2","No alias","Cyanophora paradoxa","(p38661|pdia6_medsa : 106.0) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g47470 : 103.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)","protein_coding" "evm.model.tig00000145.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000158.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000178.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000178.95","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000190.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000194.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000194.99","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000197.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000197.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000204.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000215.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000215.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000217.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000219.85","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000227.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000227.40","No alias","Cyanophora paradoxa","(at2g26900 : 122.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)","protein_coding" "evm.model.tig00000227.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000237.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000248.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000248.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000248.41","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding" "evm.model.tig00000248.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000249.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000254.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000269.31","No alias","Cyanophora paradoxa","(at1g51310 : 136.0) transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; FUNCTIONS IN: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), tRNA-specific 2-thiouridylase (InterPro:IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species: Archae - 0; Bacteria - 5626; Metazoa - 134; Fungi - 60; Plants - 58; Viruses - 0; Other Eukaryotes - 2666 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "evm.model.tig00000270.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000292.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000310.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000310.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000310.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000310.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000325.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000344.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000344.6","No alias","Cyanophora paradoxa","(at4g15530 : 824.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42910|ppdk_mescr : 815.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (reliability: 1648.0) & (original description: no original description)","protein_coding" "evm.model.tig00000344.9","No alias","Cyanophora paradoxa","(q42910|ppdk_mescr : 93.2) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 90.5) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)","protein_coding" "evm.model.tig00000350.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000361.52","No alias","Cyanophora paradoxa","(at4g32175 : 162.0) PNAS-3 related; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: PNAS-3 related (TAIR:AT2G25355.1); Has 535 Blast hits to 535 proteins in 248 species: Archae - 104; Bacteria - 0; Metazoa - 113; Fungi - 163; Plants - 59; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description)","protein_coding" "evm.model.tig00000385.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000388.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000402.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000403.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000403.48","No alias","Cyanophora paradoxa","(at2g40940 : 147.0) Ethylene receptor, subfamily 1. Has histidine kinase activity.; ethylene response sensor 1 (ERS1); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT1G66340.1); Has 78353 Blast hits to 77870 proteins in 2969 species: Archae - 539; Bacteria - 69363; Metazoa - 12; Fungi - 1128; Plants - 1692; Viruses - 20; Other Eukaryotes - 5599 (source: NCBI BLink). & (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 268.0) & (original description: no original description)","protein_coding" "evm.model.tig00000403.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000403.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000403.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000404.6","No alias","Cyanophora paradoxa","(at3g26570 : 91.3) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description)","protein_coding" "evm.model.tig00000404.8","No alias","Cyanophora paradoxa","(at3g26570 : 109.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.tig00000404.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000405.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000405.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000430.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000441.12","No alias","Cyanophora paradoxa","(at5g65900 : 171.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G18600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "evm.model.tig00000443.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000444.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000444.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000448.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000448.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000448.67","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000448.70","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000449.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000449.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000459.18","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding" "evm.model.tig00000459.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000473.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000492.166","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000492.79","No alias","Cyanophora paradoxa","(at3g26570 : 95.9) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 191.8) & (original description: no original description)","protein_coding" "evm.model.tig00000498.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000498.91","No alias","Cyanophora paradoxa","(at4g31790 : 241.0) Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "evm.model.tig00000525.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000525.2","No alias","Cyanophora paradoxa","(at5g23240 : 80.1) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G42750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) & (original description: no original description)","protein_coding" "evm.model.tig00000540.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000545.32","No alias","Cyanophora paradoxa","(at5g14740 : 93.2) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (p46281|cahx_flapr : 89.7) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase) - Flaveria pringlei & (reliability: 186.4) & (original description: no original description)","protein_coding" "evm.model.tig00000555.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000571.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000586.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000601.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000601.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000615.50","No alias","Cyanophora paradoxa","(at1g48090 : 115.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)","protein_coding" "evm.model.tig00000615.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000622.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000670.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000691.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000691.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000692.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000704.67","No alias","Cyanophora paradoxa","(at3g51470 : 132.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7043 Blast hits to 7008 proteins in 640 species: Archae - 12; Bacteria - 714; Metazoa - 1616; Fungi - 683; Plants - 2691; Viruses - 9; Other Eukaryotes - 1318 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "evm.model.tig00000737.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000743.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000743.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000743.9","No alias","Cyanophora paradoxa","(at5g10980 : 155.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 153.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 310.0) & (original description: no original description)","protein_coding" "evm.model.tig00000769.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000788.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000788.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000792.33","No alias","Cyanophora paradoxa","(at2g01830 : 104.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)","protein_coding" "evm.model.tig00000796.11","No alias","Cyanophora paradoxa","(at2g35390 : 142.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg98|kprs1_spiol : 138.0) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1) - Spinacia oleracea (Spinach) & (reliability: 284.0) & (original description: no original description)","protein_coding" "evm.model.tig00000821.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000826.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000826.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000828.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000836.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000836.7","No alias","Cyanophora paradoxa","(at3g26570 : 109.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)","protein_coding" "evm.model.tig00000842.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000842.32","No alias","Cyanophora paradoxa","(at4g12740 : 242.0) HhH-GPD base excision DNA repair family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), DNA glycosylase (InterPro:IPR011257), NUDIX hydrolase domain (InterPro:IPR000086), HhH-GPD domain (InterPro:IPR003265); Has 55833 Blast hits to 29061 proteins in 2861 species: Archae - 372; Bacteria - 10631; Metazoa - 17750; Fungi - 4523; Plants - 1695; Viruses - 834; Other Eukaryotes - 20028 (source: NCBI BLink). & (reliability: 484.0) & (original description: no original description)","protein_coding" "evm.model.tig00000849.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000849.36","No alias","Cyanophora paradoxa","(at2g41680 : 449.0) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.; NADPH-dependent thioredoxin reductase C (NTRC); FUNCTIONS IN: thioredoxin-disulfide reductase activity; INVOLVED IN: hydrogen peroxide catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Thioredoxin fold (InterPro:IPR012335), Thioredoxin reductase (InterPro:IPR005982), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Pyridine nucleotide-disulphide oxidoreductase, class-II, active site (InterPro:IPR008255), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: NADPH-dependent thioredoxin reductase A (TAIR:AT2G17420.1); Has 36111 Blast hits to 36072 proteins in 3191 species: Archae - 926; Bacteria - 24476; Metazoa - 1051; Fungi - 742; Plants - 985; Viruses - 7; Other Eukaryotes - 7924 (source: NCBI BLink). & (reliability: 898.0) & (original description: no original description)","protein_coding" "evm.model.tig00000850.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000851.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000852.34","No alias","Cyanophora paradoxa","(at5g08530 : 714.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (reliability: 1428.0) & (original description: no original description)","protein_coding" "evm.model.tig00000889.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000889.8","No alias","Cyanophora paradoxa","(at1g58200 : 101.0) A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.; MSCS-like 3 (MSL3); FUNCTIONS IN: ion channel activity; INVOLVED IN: plastid organization, response to osmotic stress; LOCATED IN: membrane, plastid envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: MSCS-like 2 (TAIR:AT5G10490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)","protein_coding" "evm.model.tig00000923.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000944.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000946.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000963.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000981.22","No alias","Cyanophora paradoxa","(at2g46210 : 92.8) Fatty acid/sphingolipid desaturase; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804), Fatty acid/sphingolipid desaturase (InterPro:IPR012171), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: Fatty acid/sphingolipid desaturase (TAIR:AT3G61580.1); Has 5941 Blast hits to 5850 proteins in 906 species: Archae - 2; Bacteria - 1188; Metazoa - 1112; Fungi - 1689; Plants - 939; Viruses - 2; Other Eukaryotes - 1009 (source: NCBI BLink). & (reliability: 185.6) & (original description: no original description)","protein_coding" "evm.model.tig00000984.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001000.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001001.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001006.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001027.29","No alias","Cyanophora paradoxa","(at4g15850 : 89.4) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)","protein_coding" "evm.model.tig00001029.7","No alias","Cyanophora paradoxa","(at3g12290 : 369.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9969 Blast hits to 9964 proteins in 2781 species: Archae - 105; Bacteria - 5648; Metazoa - 394; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (reliability: 738.0) & (original description: no original description)","protein_coding" "evm.model.tig00001049.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001056.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001065.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001065.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001071.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001085.25","No alias","Cyanophora paradoxa","(at5g10920 : 315.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22675|arly_chlre : 273.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 630.0) & (original description: no original description)","protein_coding" "evm.model.tig00001098.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001126.12","No alias","Cyanophora paradoxa","(at5g50700 : 87.8) Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.; hydroxysteroid dehydrogenase 1 (HSD1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1 (TAIR:AT5G50600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q93x68|fabg5_brana : 82.4) 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 5) (Fragment) - Brassica napus (Rape) & (reliability: 175.6) & (original description: no original description)","protein_coding" "evm.model.tig00001128.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001154.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001164.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001181.27","No alias","Cyanophora paradoxa","(at2g17700 : 129.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "evm.model.tig00001206.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001264.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001269.3","No alias","Cyanophora paradoxa","(at3g08800 : 91.7) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 149 Blast hits to 148 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 108; Fungi - 3; Plants - 22; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description)","protein_coding" "evm.model.tig00001292.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001292.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001336.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001339.24","No alias","Cyanophora paradoxa","(at5g03905 : 102.0) Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: chloroplast-localized ISCA-like protein (TAIR:AT1G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00001343.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001366.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001384.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001388.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001409.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001466.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001471.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001472.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001479.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001493.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001525.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001576.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001576.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001706.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001706.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001718.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020516.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020528.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020537.53","No alias","Cyanophora paradoxa","(at1g67490 : 85.1) Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).; glucosidase 1 (GCS1); FUNCTIONS IN: alpha-glucosidase activity; INVOLVED IN: root epidermal cell differentiation, epidermal cell differentiation; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Six-hairpin glycosidases superfamily protein (TAIR:AT1G24320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) & (original description: no original description)","protein_coding" "evm.model.tig00020538.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.173","No alias","Cyanophora paradoxa","(at3g04240 : 336.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (o82422|spy_horvu : 94.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (HvSPY) - Hordeum vulgare (Barley) & (reliability: 672.0) & (original description: no original description)","protein_coding" "evm.model.tig00020553.212","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.234","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020553.98","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.101","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.121","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020554.133","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020556.61","No alias","Cyanophora paradoxa","(at1g15730 : 145.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 17 (TAIR:AT1G80480.1); Has 16369 Blast hits to 11834 proteins in 1861 species: Archae - 128; Bacteria - 8189; Metazoa - 1729; Fungi - 553; Plants - 409; Viruses - 6; Other Eukaryotes - 5355 (source: NCBI BLink). & (reliability: 288.0) & (original description: no original description)","protein_coding" "evm.model.tig00020562.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.109","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020563.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020564.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020571.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020572.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020589.7","No alias","Cyanophora paradoxa","(at1g12970 : 92.4) Encodes PIRL3, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 3 (PIRL3); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1); Has 74858 Blast hits to 31563 proteins in 1228 species: Archae - 19; Bacteria - 7206; Metazoa - 30749; Fungi - 2417; Plants - 30057; Viruses - 17; Other Eukaryotes - 4393 (source: NCBI BLink). & (reliability: 168.6) & (original description: no original description)","protein_coding" "evm.model.tig00020592.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020592.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020597.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020601.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020608.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.119","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020610.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020616.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020629.129","No alias","Cyanophora paradoxa","(at1g15140 : 151.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 124.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 302.0) & (original description: no original description)","protein_coding" "evm.model.tig00020660.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020675.75","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.9","No alias","Cyanophora paradoxa","(at1g30400 : 699.0) glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 2 (TAIR:AT2G34660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 137.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1398.0) & (original description: no original description)","protein_coding" "evm.model.tig00020685.26","No alias","Cyanophora paradoxa","(at1g17160 : 81.6) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)","protein_coding" "evm.model.tig00020693.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020693.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020693.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020703.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020723.111","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020723.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020734.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020801.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020801.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020801.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020801.99","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020816.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020816.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020816.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020816.86","No alias","Cyanophora paradoxa","(at1g08540 : 147.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 294.0) & (original description: no original description)","protein_coding" "evm.model.tig00020824.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020824.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020830.101","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020830.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020848.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020849.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020851.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020902.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020902.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020903.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020904.97","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020911.36","No alias","Cyanophora paradoxa","(at5g66150 : 212.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)","protein_coding" "evm.model.tig00020912.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020912.27","No alias","Cyanophora paradoxa","(at4g26650 : 185.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55550.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p19682|roc3_nicsy : 94.0) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 370.0) & (original description: no original description)","protein_coding" "evm.model.tig00020927.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020934.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020939.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020941.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020943.69","No alias","Cyanophora paradoxa","(p08823|ruba_wheat : 426.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) - Triticum aestivum (Wheat) & (at2g28000 : 413.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (reliability: 826.0) & (original description: no original description)","protein_coding" "evm.model.tig00020944.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020944.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020944.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020951.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020951.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020952.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020956.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020956.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.147","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020961.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020964.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020965.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020965.20","No alias","Cyanophora paradoxa","(at3g23450 : 103.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; Has 694543 Blast hits to 47111 proteins in 2535 species: Archae - 1794; Bacteria - 163056; Metazoa - 258989; Fungi - 49151; Plants - 70496; Viruses - 8919; Other Eukaryotes - 142138 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)","protein_coding" "evm.model.tig00020965.56","No alias","Cyanophora paradoxa","(at2g17900 : 86.3) Homology Subgroup S-ET - Protein containing an interrupted SET domain.; SET domain group 37 (SDG37); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferase ATXR2 (TAIR:AT3G21820.1); Has 2797 Blast hits to 2717 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 1313; Fungi - 588; Plants - 382; Viruses - 7; Other Eukaryotes - 507 (source: NCBI BLink). & (reliability: 172.6) & (original description: no original description)","protein_coding" "evm.model.tig00020995.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020996.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021012.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021012.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021012.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021013.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021017.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021036.103","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021036.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021036.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021037.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021038.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021038.92","No alias","Cyanophora paradoxa","(at3g07980 : 91.7) MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential.; mitogen-activated protein kinase kinase kinase 6 (MAPKKK6); FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: plasma membrane organization, pollen development; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 7 (TAIR:AT3G13530.1); Has 136121 Blast hits to 133731 proteins in 5126 species: Archae - 192; Bacteria - 15089; Metazoa - 51503; Fungi - 13384; Plants - 33405; Viruses - 666; Other Eukaryotes - 21882 (source: NCBI BLink). & (reliability: 174.8) & (original description: no original description)","protein_coding" "evm.model.tig00021042.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021043.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021043.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021070.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.40","No alias","Cyanophora paradoxa","(at5g14580 : 307.0) polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description)","protein_coding" "evm.model.tig00021073.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021073.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021105.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021105.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021105.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021108.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021111.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021133.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021135.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021137.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021144.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021179.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021181.12","No alias","Cyanophora paradoxa","(at1g10500 : 143.0) Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.; chloroplast-localized ISCA-like protein (CPISCA); CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT5G03905.1); Has 10385 Blast hits to 10384 proteins in 1842 species: Archae - 43; Bacteria - 5944; Metazoa - 237; Fungi - 240; Plants - 172; Viruses - 0; Other Eukaryotes - 3749 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)","protein_coding" "evm.model.tig00021244.19","No alias","Cyanophora paradoxa","(at4g34110 : 249.0) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (q08935|roc1_nicsy : 85.9) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 498.0) & (original description: no original description)","protein_coding" "evm.model.tig00021247.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021251.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021254.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021254.17","No alias","Cyanophora paradoxa","(at1g07670 : 225.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6atv4|aca2_orysa : 212.0) Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) - Oryza sativa (Rice) & (reliability: 450.0) & (original description: no original description)","protein_coding" "evm.model.tig00021254.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021281.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021281.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021289.2","No alias","Cyanophora paradoxa","(at1g55350 : 199.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 398.0) & (original description: no original description)","protein_coding" "evm.model.tig00021289.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021314.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021319.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021346.2","No alias","Cyanophora paradoxa","(at1g12770 : 94.4) Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description)","protein_coding" "evm.model.tig00021348.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021365.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021374.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021374.32","No alias","Cyanophora paradoxa","(at1g32520 : 240.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 480.0) & (original description: no original description)","protein_coding" "evm.model.tig00021432.5","No alias","Cyanophora paradoxa","(at3g20970 : 212.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 4 (NFU4); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 5 (TAIR:AT1G51390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)","protein_coding" "evm.model.tig00021433.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021435.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021438.11","No alias","Cyanophora paradoxa","(at1g02010 : 175.0) member of KEULE Gene Family; secretory 1A (SEC1A); FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1). & (q7xwp3|sec1a_orysa : 160.0) Probable protein transport Sec1a - Oryza sativa (Rice) & (reliability: 350.0) & (original description: no original description)","protein_coding" "evm.model.tig00021438.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021462.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021463.2","No alias","Cyanophora paradoxa","(q96468|bas1_horvu : 223.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (at3g11630 : 216.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.; Thioredoxin superfamily protein; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 16794 Blast hits to 16794 proteins in 2739 species: Archae - 621; Bacteria - 10920; Metazoa - 1157; Fungi - 359; Plants - 398; Viruses - 0; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description)","protein_coding" "evm.model.tig00021464.39","No alias","Cyanophora paradoxa","(o23755|ef2_betvu : 1083.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (at1g56070 : 1067.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (reliability: 2134.0) & (original description: no original description)","protein_coding" "evm.model.tig00021464.5","No alias","Cyanophora paradoxa","(at1g64190 : 654.0) 6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT5G41670.2); Has 12957 Blast hits to 12851 proteins in 2621 species: Archae - 92; Bacteria - 8657; Metazoa - 674; Fungi - 254; Plants - 330; Viruses - 4; Other Eukaryotes - 2946 (source: NCBI BLink). & (reliability: 1308.0) & (original description: no original description)","protein_coding" "evm.model.tig00021489.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021493.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021518.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021521.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021532.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021535.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021535.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021537.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021569.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021582.10","No alias","Cyanophora paradoxa","(at4g22220 : 202.0) Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description)","protein_coding" "evm.model.tig00021582.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021586.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021589.25","No alias","Cyanophora paradoxa","(p41347|ftrc_maize : 184.0) Ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor (EC 1.18.-.-) (FTR-C) (Ferredoxin-thioredoxin reductase subunit B) (FTR-B) - Zea mays (Maize) & (at2g04700 : 178.0) ferredoxin thioredoxin reductase catalytic beta chain family protein; FUNCTIONS IN: ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin thioredoxin reductase, beta subunit (InterPro:IPR004209); Has 267 Blast hits to 267 proteins in 113 species: Archae - 18; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 356.0) & (original description: no original description)","protein_coding" "evm.model.tig00021603.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.37","No alias","Cyanophora paradoxa","(at3g45770 : 237.0) Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 474.0) & (original description: no original description)","protein_coding" "evm.model.tig00021612.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021612.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021621.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021682.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021726.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021741.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021745.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021745.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021762.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021795.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00022075.104","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00022075.28","No alias","Cyanophora paradoxa",""(q2ras0|aca5_orysa : 374.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (at2g41560 : 371.0) encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. localized to the vacuole.; ""autoinhibited Ca(2+)-ATPase, isoform 4"" (ACA4); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+-ATPase 11 (TAIR:AT3G57330.1); Has 45699 Blast hits to 34603 proteins in 3211 species: Archae - 845; Bacteria - 31242; Metazoa - 4073; Fungi - 2705; Plants - 2048; Viruses - 3; Other Eukaryotes - 4783 (source: NCBI BLink). & (reliability: 742.0) & (original description: no original description)"","protein_coding" "evm.model.tig00022075.42","No alias","Cyanophora paradoxa","(o82150|ftsh_tobac : 339.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at1g50250 : 338.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (reliability: 676.0) & (original description: no original description)","protein_coding" "Glyma.01G011300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "Glyma.01G042300","No alias","Glycine max","PAS/LOV protein B","protein_coding" "Glyma.01G192300","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding" "Glyma.01G200800","No alias","Glycine max","CheY-like two-component responsive regulator family protein","protein_coding" "Glyma.01G231700","No alias","Glycine max","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding" "Glyma.02G049600","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding" "Glyma.02G100000","No alias","Glycine max","STT7 homolog STN7","protein_coding" "Glyma.02G149700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G184700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.02G203400","No alias","Glycine max","BTB/POZ domain with WD40/YVTN repeat-like protein","protein_coding" "Glyma.02G296600","No alias","Glycine max","salt-inducible zinc finger 1","protein_coding" "Glyma.03G017200","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding" "Glyma.03G063900","No alias","Glycine max","Transmembrane amino acid transporter family protein","protein_coding" "Glyma.03G117600","No alias","Glycine max","squamosa promoter binding protein-like 9","protein_coding" "Glyma.03G122500","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.03G128800","No alias","Glycine max","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein","protein_coding" "Glyma.03G172100","No alias","Glycine max","Major facilitator superfamily protein","protein_coding" "Glyma.03G220000","No alias","Glycine max","Function unknown","protein_coding" "Glyma.04G023700","No alias","Glycine max","Pathogenesis-related thaumatin superfamily protein","protein_coding" "Glyma.04G033500","No alias","Glycine max","J-domain protein required for chloroplast accumulation response 1","protein_coding" "Glyma.05G014300","No alias","Glycine max","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "Glyma.05G025400","No alias","Glycine max","fucosyltransferase 1","protein_coding" "Glyma.05G027400","No alias","Glycine max","TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14","protein_coding" "Glyma.05G034600","No alias","Glycine max","Calmodulin binding protein-like","protein_coding" "Glyma.05G092200","No alias","Glycine max","Function unknown","protein_coding" "Glyma.05G230700","No alias","Glycine max","protein kinase family protein","protein_coding" "Glyma.05G243200","No alias","Glycine max","plastid movement impaired1","protein_coding" "Glyma.06G255900","No alias","Glycine max","receptor kinase 3","protein_coding" "Glyma.07G057600","No alias","Glycine max","TRICHOME BIREFRINGENCE-LIKE 25","protein_coding" "Glyma.07G075500","No alias","Glycine max","Thioesterase superfamily protein","protein_coding" "Glyma.07G090700","No alias","Glycine max","Function unknown","protein_coding" "Glyma.08G017300","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding" "Glyma.08G064600","No alias","Glycine max","K+ efflux antiporter 3","protein_coding" "Glyma.08G133400","No alias","Glycine max","Protein of unknown function (DUF3550/UPF0682)","protein_coding" "Glyma.08G167900","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding" "Glyma.08G255200","No alias","Glycine max","CONSTANS-like 2","protein_coding" "Glyma.08G282100","No alias","Glycine max","phosphate transporter 2;1","protein_coding" "Glyma.08G302600","No alias","Glycine max","alanine:glyoxylate aminotransferase","protein_coding" "Glyma.09G043000","No alias","Glycine max","Dynein light chain type 1 family protein","protein_coding" "Glyma.09G089600","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding" "Glyma.09G149601","No alias","Glycine max","carboxyesterase 20","protein_coding" "Glyma.09G254800","No alias","Glycine max","WRKY family transcription factor","protein_coding" "Glyma.10G060300","No alias","Glycine max","Pathogenesis-related thaumatin superfamily protein","protein_coding" "Glyma.10G061300","No alias","Glycine max","spermidine hydroxycinnamoyl transferase","protein_coding" "Glyma.10G061700","No alias","Glycine max","Pathogenesis-related thaumatin superfamily protein","protein_coding" "Glyma.10G076100","No alias","Glycine max","AP2/B3-like transcriptional factor family protein","protein_coding" "Glyma.10G083500","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G141400","No alias","Glycine max","phytochrome A","protein_coding" "Glyma.10G278600","No alias","Glycine max","Function unknown","protein_coding" "Glyma.10G286500","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.11G014600","No alias","Glycine max","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding" "Glyma.11G041300","No alias","Glycine max","CheY-like two-component responsive regulator family protein","protein_coding" "Glyma.11G049800","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding" "Glyma.11G174100","No alias","Glycine max","fatty acid desaturase 8","protein_coding" "Glyma.12G035700","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding" "Glyma.12G055900","No alias","Glycine max","Putative glycosyl hydrolase of unknown function (DUF1680)","protein_coding" "Glyma.12G108900","No alias","Glycine max","Auxin-responsive GH3 family protein","protein_coding" "Glyma.12G117700","No alias","Glycine max","GBF\'s pro-rich region-interacting factor 1","protein_coding" "Glyma.12G136300","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding" "Glyma.12G180000","No alias","Glycine max","magnesium (Mg) transporter 10","protein_coding" "Glyma.12G241100","No alias","Glycine max","GroES-like zinc-binding alcohol dehydrogenase family protein","protein_coding" "Glyma.13G032400","No alias","Glycine max","NAD kinase 2","protein_coding" "Glyma.13G184900","No alias","Glycine max","LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "Glyma.13G237500","No alias","Glycine max","Dof-type zinc finger DNA-binding family protein","protein_coding" "Glyma.13G274700","No alias","Glycine max","Serine/threonine-protein kinase WNK (With No Lysine)-related","protein_coding" "Glyma.13G302100","No alias","Glycine max","photosystem II reaction center PSB29 protein","protein_coding" "Glyma.14G033200","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "Glyma.14G150400","No alias","Glycine max","3\'-5\' exonuclease domain-containing protein","protein_coding" "Glyma.14G154600","No alias","Glycine max","NAD kinase 2","protein_coding" "Glyma.14G160600","No alias","Glycine max","sigma factor E","protein_coding" "Glyma.14G174200","No alias","Glycine max","cryptochrome 1","protein_coding" "Glyma.14G199400","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding" "Glyma.14G203700","No alias","Glycine max","with no lysine (K) kinase 4","protein_coding" "Glyma.15G127500","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding" "Glyma.15G250050","No alias","Glycine max","Function unknown","protein_coding" "Glyma.15G259600","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding" "Glyma.16G001300","No alias","Glycine max","Function unknown","protein_coding" "Glyma.16G024500","No alias","Glycine max","Cytochrome b561/ferric reductase transmembrane with DOMON related domain","protein_coding" "Glyma.16G171900","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain","protein_coding" "Glyma.16G217700","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding" "Glyma.17G073200","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding" "Glyma.17G085100","No alias","Glycine max","ferric reduction oxidase 8","protein_coding" "Glyma.17G109800","No alias","Glycine max","heptahelical transmembrane protein1","protein_coding" "Glyma.18G025600","No alias","Glycine max","LOB domain-containing protein 21","protein_coding" "Glyma.18G144100","No alias","Glycine max","phosphate transporter 2;1","protein_coding" "Glyma.18G228900","No alias","Glycine max","digalactosyl diacylglycerol deficient 2","protein_coding" "Glyma.18G278100","No alias","Glycine max","CONSTANS-like 2","protein_coding" "Glyma.18G283400","No alias","Glycine max","Chitinase family protein","protein_coding" "Glyma.20G104000","No alias","Glycine max","thioredoxin X","protein_coding" "Glyma.20G107800","No alias","Glycine max","hydroxypyruvate reductase","protein_coding" "Glyma.20G113400","No alias","Glycine max","Uncharacterized protein family (UPF0016)","protein_coding" "Glyma.20G203800","No alias","Glycine max","proline-rich protein 1","protein_coding" "GRMZM2G017351","No alias","Zea mays","mitogen-activated protein kinase 16","protein_coding" "GRMZM2G018441","No alias","Zea mays","2-phosphoglycolate phosphatase 1","protein_coding" "GRMZM2G021074","No alias","Zea mays","RELA/SPOT homolog 3","protein_coding" "GRMZM2G024391","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G038487","No alias","Zea mays","Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain","protein_coding" "GRMZM2G042074","No alias","Zea mays","AAA-type ATPase family protein","protein_coding" "GRMZM2G045154","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "GRMZM2G046498","No alias","Zea mays","NAD kinase 2","protein_coding" "GRMZM2G053909","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G054109","No alias","Zea mays","Calmodulin-binding protein","protein_coding" "GRMZM2G057820","No alias","Zea mays","iron-regulated protein 3","protein_coding" "GRMZM2G058450","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G062412","No alias","Zea mays","AFG1-like ATPase family protein","protein_coding" "GRMZM2G062761","No alias","Zea mays","MAP kinase 9","protein_coding" "GRMZM2G068557","No alias","Zea mays","ferric reduction oxidase 7","protein_coding" "GRMZM2G070448","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G077202","No alias","Zea mays","chloroplast beta-amylase","protein_coding" "GRMZM2G077844","No alias","Zea mays","ENTH/VHS/GAT family protein","protein_coding" "GRMZM2G079499","No alias","Zea mays","LORELEI-LIKE-GPI-ANCHORED PROTEIN 1","protein_coding" "GRMZM2G081928","No alias","Zea mays","Peroxidase superfamily protein","protein_coding" "GRMZM2G083058","No alias","Zea mays","Sulfite exporter TauE/SafE family protein","protein_coding" "GRMZM2G088436","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G092780","No alias","Zea mays","phosphate transporter 2;1","protein_coding" "GRMZM2G104501","No alias","Zea mays","5\'-AMP-activated protein kinase-related","protein_coding" "GRMZM2G106945","No alias","Zea mays","EF hand calcium-binding protein family","protein_coding" "GRMZM2G114575","No alias","Zea mays","CBL-interacting protein kinase 1","protein_coding" "GRMZM2G114841","No alias","Zea mays","microtubule-associated protein 65-8","protein_coding" "GRMZM2G116638","No alias","Zea mays","GRAS family transcription factor","protein_coding" "GRMZM2G116700","No alias","Zea mays","homolog of yeast autophagy 18 (ATG18) F","protein_coding" "GRMZM2G118693","No alias","Zea mays","Homeodomain-like superfamily protein","protein_coding" "GRMZM2G125140","No alias","Zea mays","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding" "GRMZM2G133189","No alias","Zea mays","Ribosomal protein L34e superfamily protein","protein_coding" "GRMZM2G135770","No alias","Zea mays","Regulator of chromosome condensation (RCC1) family protein","protein_coding" "GRMZM2G136389","No alias","Zea mays","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding" "GRMZM2G149923","No alias","Zea mays","calmodulin 1","protein_coding" "GRMZM2G151992","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "GRMZM2G155753","No alias","Zea mays","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding" "GRMZM2G157472","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G162182","No alias","Zea mays","Pyridoxamine 5\'-phosphate oxidase family protein","protein_coding" "GRMZM2G162282","No alias","Zea mays","rubisco activase","protein_coding" "GRMZM2G162292","No alias","Zea mays","PPPDE putative thiol peptidase family protein","protein_coding" "GRMZM2G168214","No alias","Zea mays","nodulin MtN21 /EamA-like transporter family protein","protein_coding" "GRMZM2G171410","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding" "GRMZM2G175218","No alias","Zea mays","beta-amylase 1","protein_coding" "GRMZM2G179432","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "GRMZM2G310115","No alias","Zea mays","plectin-related","protein_coding" "GRMZM2G334722","No alias","Zea mays","sequence-specific DNA binding transcription factors","protein_coding" "GRMZM2G335738","No alias","Zea mays","RAB GTPase homolog A5A","protein_coding" "GRMZM2G341366","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G345798","No alias","Zea mays","Function unknown","protein_coding" "GRMZM2G353024","No alias","Zea mays","Phototropic-responsive NPH3 family protein","protein_coding" "GRMZM2G391936","No alias","Zea mays","ADP glucose pyrophosphorylase large subunit 1","protein_coding" "GRMZM2G395114","No alias","Zea mays","sulfate transporter 91","protein_coding" "GRMZM2G396477","No alias","Zea mays","ARM repeat superfamily protein","protein_coding" "GRMZM2G434317","No alias","Zea mays","Protein of unknown function (DUF707)","protein_coding" "GRMZM2G440459","No alias","Zea mays","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding" "GRMZM2G448185","No alias","Zea mays","Riboflavin synthase-like superfamily protein","protein_coding" "GRMZM2G507217","No alias","Zea mays","Function unknown","protein_coding" "GRMZM5G835235","No alias","Zea mays","shaggy-like kinase 13","protein_coding" "GRMZM5G876973","No alias","Zea mays","Plant VAMP (vesicle-associated membrane protein) family protein","protein_coding" "HORVU0Hr1G007770.1","No alias","Hordeum vulgare","GARP subgroup GLK transcription factor","protein_coding" "HORVU0Hr1G010940.1","No alias","Hordeum vulgare","GARP subgroup GLK transcription factor","protein_coding" "HORVU0Hr1G012460.1","No alias","Hordeum vulgare","Fibrillin plastoglobule core protein *(FBN1/2)","protein_coding" "HORVU0Hr1G031710.1","No alias","Hordeum vulgare","p-coumaroyl shikimate/quinate 3'-hydroxylase *(C3'H) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU0Hr1G039090.1","No alias","Hordeum vulgare","Fibrillin plastoglobule core protein *(FBN4)","protein_coding" "HORVU1Hr1G004720.1","No alias","Hordeum vulgare","anion transporter *(NRT1/PTR)","protein_coding" "HORVU1Hr1G012680.4","No alias","Hordeum vulgare","EC_2.4 glycosyltransferase","protein_coding" "HORVU1Hr1G017050.3","No alias","Hordeum vulgare","class phi glutathione S-transferase","protein_coding" "HORVU1Hr1G047220.1","No alias","Hordeum vulgare","ferulate 5-hydroxylase *(F5H) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU1Hr1G089240.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G005520.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G006910.10","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU2Hr1G064100.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G065450.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G075010.9","No alias","Hordeum vulgare","nicotinate phosphoribosyltransferase *(NAPRT) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding" "HORVU2Hr1G075110.5","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G089940.1","No alias","Hordeum vulgare","plasma membrane intrinsic protein *(PIP)","protein_coding" "HORVU2Hr1G089970.3","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G090670.1","No alias","Hordeum vulgare","EC_2.8 transferase transferring sulfur-containing group","protein_coding" "HORVU2Hr1G096360.13","No alias","Hordeum vulgare","plasma membrane intrinsic protein *(PIP)","protein_coding" "HORVU2Hr1G113260.1","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU2Hr1G113270.2","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU3Hr1G014790.7","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G026890.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G030950.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU3Hr1G037780.2","No alias","Hordeum vulgare","non-specific cation channel *(PQL1)","protein_coding" "HORVU3Hr1G040870.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G059140.1","No alias","Hordeum vulgare","EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "HORVU3Hr1G066600.1","No alias","Hordeum vulgare","bHLH-type transcription factor","protein_coding" "HORVU3Hr1G085860.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G014080.4","No alias","Hordeum vulgare","accessory component *(GUN4) of magnesium-chelatase complex","protein_coding" "HORVU4Hr1G015330.1","No alias","Hordeum vulgare","protein involved in PS-II assembly *(Psb33)","protein_coding" "HORVU4Hr1G018150.3","No alias","Hordeum vulgare","methylsterol monooxygenase SMO1 of phytosterol C4-demethylation complex & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU4Hr1G025070.2","No alias","Hordeum vulgare","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU4Hr1G040290.5","No alias","Hordeum vulgare","circadian clock transcriptional co-activator *(LNK)","protein_coding" "HORVU4Hr1G059390.1","No alias","Hordeum vulgare","chaperone *(Hsp70)","protein_coding" "HORVU4Hr1G071070.7","No alias","Hordeum vulgare","cis-prenyltransferase *(LEW1)","protein_coding" "HORVU4Hr1G071900.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G077680.11","No alias","Hordeum vulgare","EC_2.3 acyltransferase","protein_coding" "HORVU4Hr1G081040.4","No alias","Hordeum vulgare","subfamily ABCG transporter","protein_coding" "HORVU4Hr1G082040.2","No alias","Hordeum vulgare","catalase & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding" "HORVU4Hr1G083100.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU4Hr1G090380.7","No alias","Hordeum vulgare","regulatory protein *(BCM) of chlorophyll homeostasis","protein_coding" "HORVU5Hr1G013840.1","No alias","Hordeum vulgare","L-galactose dehydrogenase *(GalDH)","protein_coding" "HORVU5Hr1G036460.2","No alias","Hordeum vulgare","long-chain acyl-CoA synthetase *(LACS9) & EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "HORVU5Hr1G045580.1","No alias","Hordeum vulgare","zf-HD-type transcription factor","protein_coding" "HORVU5Hr1G059140.9","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G063630.3","No alias","Hordeum vulgare","LHC-related protein *(ELIP)","protein_coding" "HORVU5Hr1G071080.10","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G071140.5","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G084670.1","No alias","Hordeum vulgare","CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU5Hr1G109040.1","No alias","Hordeum vulgare","arabinogalactan protein *(Xylogen)","protein_coding" "HORVU6Hr1G004000.1","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding" "HORVU6Hr1G027440.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G040540.8","No alias","Hordeum vulgare","bifunctional cGMP-dependent protein kinase and phosphatase *(PKG) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU6Hr1G053100.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G058930.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G060230.12","No alias","Hordeum vulgare","group-I RNA polymerase-II phosphatase & subcluster CPL phosphatase & phosphatase component *(CPL) of chromatin silencing regulator complex","protein_coding" "HORVU6Hr1G061380.5","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G063480.6","No alias","Hordeum vulgare","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "HORVU6Hr1G063490.2","No alias","Hordeum vulgare","S-adenosyl methionine synthetase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "HORVU6Hr1G065710.13","No alias","Hordeum vulgare","phosphate transporter *(PHT5)","protein_coding" "HORVU6Hr1G070420.2","No alias","Hordeum vulgare","delta-12/delta-15 fatty acid desaturase","protein_coding" "HORVU6Hr1G091360.6","No alias","Hordeum vulgare","deubiquitinase *(OTU6-12)","protein_coding" "HORVU6Hr1G091430.3","No alias","Hordeum vulgare","deubiquitinase *(OTU6-12)","protein_coding" "HORVU6Hr1G094190.4","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G000580.2","No alias","Hordeum vulgare","OPC-8","protein_coding" "HORVU7Hr1G017790.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G021650.5","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "HORVU7Hr1G036180.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G038220.1","No alias","Hordeum vulgare","Nodulin-26-like intrinsic protein *(NIP)","protein_coding" "HORVU7Hr1G038270.1","No alias","Hordeum vulgare","Nodulin-26-like intrinsic protein *(NIP)","protein_coding" "HORVU7Hr1G073650.1","No alias","Hordeum vulgare","substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex","protein_coding" "HORVU7Hr1G077750.1","No alias","Hordeum vulgare","ferredoxin targeted to NADP reduction","protein_coding" "HORVU7Hr1G082280.1","No alias","Hordeum vulgare","caffeic acid O-methyltransferase *(COMT) & EC_2.1 transferase transferring one-carbon group","protein_coding" "HORVU7Hr1G083690.3","No alias","Hordeum vulgare","GARP subgroup GLK transcription factor","protein_coding" "HORVU7Hr1G088750.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G103060.4","No alias","Hordeum vulgare","UBQ ubiquitin-fold protein","protein_coding" "HORVU7Hr1G109290.2","No alias","Hordeum vulgare","interactive protein kinase of ROP-GTPase activity *(RBK/RRK) & RLCK-VI receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "HORVU7Hr1G112240.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "Kfl00001_0100","kfl00001_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00001_0210","kfl00001_0210_v1.1","Klebsormidium nitens","(q5qm84|tpc1_orysa : 445.0) Probable voltage-dependent calcium channel protein TPC1 (Probable voltage-gated calcium channel) (Two-pore calcium channel protein) - Oryza sativa (Rice) & (at4g03560 : 436.0) Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress.; two-pore channel 1 (TPC1); FUNCTIONS IN: voltage-gated calcium channel activity, calcium channel activity; INVOLVED IN: regulation of jasmonic acid biosynthetic process, calcium ion transport, calcium-mediated signaling, seed germination, regulation of stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Ion transport (InterPro:IPR005821), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description)","protein_coding" "Kfl00001_0830","kfl00001_0830_v1.1","Klebsormidium nitens","(at1g26220 : 166.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 1297 Blast hits to 1297 proteins in 410 species: Archae - 14; Bacteria - 927; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)","protein_coding" "Kfl00003_0250","kfl00003_0250_v1.1","Klebsormidium nitens","(at1g30680 : 223.0) toprim domain-containing protein; FUNCTIONS IN: DNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: DNA replication, DNA metabolic process; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Toprim domain (InterPro:IPR006171); BEST Arabidopsis thaliana protein match is: nucleic acid binding;nucleic acid binding (TAIR:AT1G30660.1); Has 1118 Blast hits to 1106 proteins in 217 species: Archae - 0; Bacteria - 270; Metazoa - 48; Fungi - 0; Plants - 77; Viruses - 127; Other Eukaryotes - 596 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description)","protein_coding" "Kfl00003_0550","kfl00003_0550_v1.1","Klebsormidium nitens","(at1g43690 : 412.0) ubiquitin interaction motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin interacting motif (InterPro:IPR003903); Has 368 Blast hits to 347 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 824.0) & (original description: no original description)","protein_coding" "Kfl00005_0040","kfl00005_0040_v1.1","Klebsormidium nitens","(at1g74070 : 189.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1); Has 3262 Blast hits to 3261 proteins in 458 species: Archae - 0; Bacteria - 134; Metazoa - 1442; Fungi - 557; Plants - 702; Viruses - 0; Other Eukaryotes - 427 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)","protein_coding" "Kfl00007_0530","kfl00007_0530_v1.1","Klebsormidium nitens","(at2g28100 : 426.0) Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 426.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 852.0) & (original description: no original description)","protein_coding" "Kfl00009_0500","kfl00009_0500_v1.1","Klebsormidium nitens","(p13869|cb12_pethy : 139.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (at3g61470 : 138.0) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)","protein_coding" "Kfl00009_0510","kfl00009_0510_v1.1","Klebsormidium nitens","(at3g54890 : 130.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (p13869|cb12_pethy : 125.0) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 260.0) & (original description: no original description)","protein_coding" "Kfl00009_0760","kfl00009_0760_v1.1","Klebsormidium nitens","(at5g55220 : 408.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 816.0) & (original description: no original description)","protein_coding" "Kfl00010_0590","kfl00010_0590_v1.1","Klebsormidium nitens","(at2g41040 : 265.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to karrikin; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G78140.1); Has 8121 Blast hits to 8118 proteins in 1828 species: Archae - 365; Bacteria - 6420; Metazoa - 92; Fungi - 271; Plants - 324; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (reliability: 530.0) & (original description: no original description)","protein_coding" "Kfl00014_0370","kfl00014_0370_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00014_0570","kfl00014_0570_v1.1","Klebsormidium nitens","(at1g32520 : 253.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 506.0) & (original description: no original description)","protein_coding" "Kfl00020_0280","kfl00020_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00022_0210","kfl00022_0210_v1.1","Klebsormidium nitens","(at4g17050 : 278.0) Encodes a protein with ureidoglycine aminohydrolase activity.; ureidoglycine aminohydrolase (UGLYAH); FUNCTIONS IN: ureidoglycine aminohydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: allantoin catabolic process, regulation of transcription; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin 2, conserved barrel (InterPro:IPR013096), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description)","protein_coding" "Kfl00022_0320","kfl00022_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00023_0160","kfl00023_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00027_0360","kfl00027_0360_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00028_0130","kfl00028_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00028_0150","kfl00028_0150_v1.1","Klebsormidium nitens","(at4g31040 : 269.0) CemA-like proton extrusion protein-related; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:ATCG00530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9tkz2|cema_nepol : 136.0) Chloroplast envelope membrane protein - Nephroselmis olivacea & (reliability: 538.0) & (original description: no original description)","protein_coding" "Kfl00031_0250","kfl00031_0250_v1.1","Klebsormidium nitens","(at4g11010 : 224.0) nucleoside diphosphate kinase 3 (ndpk3), located to the inter-membrane space in mitochondria; nucleoside diphosphate kinase 3 (NDPK3); FUNCTIONS IN: nucleoside diphosphate kinase activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to oxidative stress; LOCATED IN: mitochondrion, mitochondrial inner membrane, plastid; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G23900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q8rxa8|ndk4_spiol : 224.0) Nucleoside diphosphate kinase 4, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase IV) (NDK IV) (NDP kinase IV) (NDPK IV) (Nucleoside diphosphate kinase III) - Spinacia oleracea (Spinach) & (reliability: 448.0) & (original description: no original description)","protein_coding" "Kfl00033_g21","kfl00033_g21_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00034_0060","kfl00034_0060_v1.1","Klebsormidium nitens","(at1g65980 : 167.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)","protein_coding" "Kfl00036_0130","kfl00036_0130_v1.1","Klebsormidium nitens","(at5g38360 : 192.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2073 Blast hits to 2071 proteins in 500 species: Archae - 14; Bacteria - 1119; Metazoa - 146; Fungi - 52; Plants - 356; Viruses - 0; Other Eukaryotes - 386 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)","protein_coding" "Kfl00037_0190","kfl00037_0190_v1.1","Klebsormidium nitens","(at1g26761 : 303.0) Arabinanase/levansucrase/invertase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description)","protein_coding" "Kfl00038_0020","kfl00038_0020_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding" "Kfl00040_0430","kfl00040_0430_v1.1","Klebsormidium nitens","(at3g26570 : 124.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)","protein_coding" "Kfl00040_0435","kfl00040_0435_v1.1","Klebsormidium nitens","(at3g26570 : 83.2) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)","protein_coding" "Kfl00044_0280","kfl00044_0280_v1.1","Klebsormidium nitens","(at2g39010 : 229.0) plasma membrane intrinsic protein 2E (PIP2E); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;5 (TAIR:AT3G54820.1); Has 10794 Blast hits to 10789 proteins in 2219 species: Archae - 81; Bacteria - 5177; Metazoa - 1475; Fungi - 441; Plants - 2519; Viruses - 2; Other Eukaryotes - 1099 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 222.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 458.0) & (original description: no original description)","protein_coding" "Kfl00044_0300","kfl00044_0300_v1.1","Klebsormidium nitens","(q43058|hem2_phypa : 503.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) - Physcomitrella patens (Moss) & (at1g69740 : 478.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (reliability: 956.0) & (original description: no original description)","protein_coding" "Kfl00044_0310","kfl00044_0310_v1.1","Klebsormidium nitens","(at5g48545 : 114.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; histidine triad nucleotide-binding 3 (HINT3); CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "Kfl00045_0350","kfl00045_0350_v1.1","Klebsormidium nitens","(at4g01400 : 770.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). & (reliability: 1540.0) & (original description: no original description)","protein_coding" "Kfl00045_0370","kfl00045_0370_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00046_0320","kfl00046_0320_v1.1","Klebsormidium nitens","(at5g01510 : 264.0) ROOT UV-B SENSITIVE 5 (RUS5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT3G45890.1); Has 426 Blast hits to 424 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 111; Fungi - 69; Plants - 183; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 528.0) & (original description: no original description)","protein_coding" "Kfl00047_0290","kfl00047_0290_v1.1","Klebsormidium nitens","(at1g73700 : 278.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT5G52450.1); Has 10814 Blast hits to 10714 proteins in 1986 species: Archae - 254; Bacteria - 7697; Metazoa - 157; Fungi - 330; Plants - 1356; Viruses - 0; Other Eukaryotes - 1020 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description)","protein_coding" "Kfl00048_0380","kfl00048_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00050_0540","kfl00050_0540_v1.1","Klebsormidium nitens","(at3g59780 : 189.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: calcium sensing receptor (TAIR:AT5G23060.1); Has 1153 Blast hits to 413 proteins in 144 species: Archae - 0; Bacteria - 338; Metazoa - 73; Fungi - 101; Plants - 75; Viruses - 6; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)","protein_coding" "Kfl00053_0100","kfl00053_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00053_0120","kfl00053_0120_v1.1","Klebsormidium nitens","(at1g05385 : 119.0) Encodes a Psb27 homolog involved in photosystem II biogenesis.; LOW PSII ACCUMULATION 19 (LPA19); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II assembly; LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 214 Blast hits to 214 proteins in 55 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)","protein_coding" "Kfl00053_0210","kfl00053_0210_v1.1","Klebsormidium nitens","(q7xr51|phyk1_orysa : 158.0) Probable phytol kinase 1, chloroplast precursor (EC 2.7.-.-) - Oryza sativa (Rice) & (at5g04490 : 143.0) Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis.; vitamin E pathway gene 5 (VTE5); FUNCTIONS IN: phytol kinase activity, phosphatidate cytidylyltransferase activity; INVOLVED IN: vitamin E biosynthetic process, phospholipid biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: Phosphatidate cytidylyltransferase family protein (TAIR:AT5G58560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 286.0) & (original description: no original description)","protein_coding" "Kfl00053_0360","kfl00053_0360_v1.1","Klebsormidium nitens","(at5g65860 : 402.0) ankyrin repeat family protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Arginine N-methyltransferase 2 (InterPro:IPR017408), Methyltransferase type 11 (InterPro:IPR013216), Ankyrin repeat (InterPro:IPR002110); Has 14669 Blast hits to 7820 proteins in 738 species: Archae - 65; Bacteria - 1760; Metazoa - 7798; Fungi - 1170; Plants - 439; Viruses - 38; Other Eukaryotes - 3399 (source: NCBI BLink). & (reliability: 804.0) & (original description: no original description)","protein_coding" "Kfl00056_0170","kfl00056_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00057_g26","kfl00057_g26_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00058_0060","kfl00058_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00059_0060","kfl00059_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00061_0210","kfl00061_0210_v1.1","Klebsormidium nitens","(at5g54810 : 672.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43284|trpb2_maize : 669.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (reliability: 1344.0) & (original description: no original description)","protein_coding" "Kfl00065_0280","kfl00065_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00066_0290","kfl00066_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00067_0250","kfl00067_0250_v1.1","Klebsormidium nitens","(at4g03080 : 380.0) BRI1 suppressor 1 (BSU1)-like 1 (BSL1); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine protein phosphatase, BSU1 (InterPro:IPR012391), Metallophosphoesterase (InterPro:IPR004843), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Serine/threonine protein phosphatase family protein (TAIR:AT1G03445.1); Has 11450 Blast hits to 9180 proteins in 548 species: Archae - 80; Bacteria - 322; Metazoa - 3883; Fungi - 1977; Plants - 2720; Viruses - 6; Other Eukaryotes - 2462 (source: NCBI BLink). & (q2qm47|bsl2_orysa : 379.0) Serine/threonine-protein phosphatase BSL2 homolog (EC 3.1.3.16) (BSU1-like protein 2 homolog) - Oryza sativa (Rice) & (reliability: 758.0) & (original description: no original description)","protein_coding" "Kfl00071_0220","kfl00071_0220_v1.1","Klebsormidium nitens","(q852s5|ndk2_tobac : 233.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 225.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (reliability: 450.0) & (original description: no original description)","protein_coding" "Kfl00071_0230","kfl00071_0230_v1.1","Klebsormidium nitens","(q39613|cyph_catro : 197.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g16600 : 196.0) Encodes cytosolic cyclophilin ROC3.; rotamase CYP 3 (ROC3); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 12245 Blast hits to 12232 proteins in 1905 species: Archae - 88; Bacteria - 3660; Metazoa - 2934; Fungi - 1299; Plants - 1235; Viruses - 4; Other Eukaryotes - 3025 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)","protein_coding" "Kfl00079_0430","kfl00079_0430_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00081_0160","kfl00081_0160_v1.1","Klebsormidium nitens","(at4g33670 : 392.0) Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis; NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink). & (p40691|a115_tobac : 99.4) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 784.0) & (original description: no original description)","protein_coding" "Kfl00082_0090","kfl00082_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00083_0310","kfl00083_0310_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00084_0250","kfl00084_0250_v1.1","Klebsormidium nitens","(at1g20816 : 89.4) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 178.8) & (original description: no original description)","protein_coding" "Kfl00085_0030","kfl00085_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00085_0200","kfl00085_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00088_0090","kfl00088_0090_v1.1","Klebsormidium nitens","(at1g73110 : 485.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, ATP binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1); Has 469 Blast hits to 469 proteins in 170 species: Archae - 27; Bacteria - 71; Metazoa - 17; Fungi - 60; Plants - 256; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (o98997|rca_phaau : 317.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Phaseolus aureus (Mung bean) (Vigna radiata) & (reliability: 970.0) & (original description: no original description)","protein_coding" "Kfl00089_0220","kfl00089_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00090_0160","kfl00090_0160_v1.1","Klebsormidium nitens","(at1g56340 : 471.0) Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.; calreticulin 1a (CRT1a); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, calcium ion homeostasis; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1b (TAIR:AT1G09210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40401|calr_nicpl : 471.0) Calreticulin precursor - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 942.0) & (original description: no original description)","protein_coding" "Kfl00092_0120","kfl00092_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00094_0250","kfl00094_0250_v1.1","Klebsormidium nitens","(at3g55440 : 379.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (p48495|tpis_pethy : 376.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (reliability: 758.0) & (original description: no original description)","protein_coding" "Kfl00094_0270","kfl00094_0270_v1.1","Klebsormidium nitens","(at2g29690 : 623.0) Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.; anthranilate synthase 2 (ASA2); FUNCTIONS IN: anthranilate synthase activity; INVOLVED IN: tryptophan biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast, anthranilate synthase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Anthranilate synthase component I (InterPro:IPR019999), Anthranilate synthase component I, PabB-like (InterPro:IPR005256); BEST Arabidopsis thaliana protein match is: anthranilate synthase alpha subunit 1 (TAIR:AT5G05730.1); Has 16475 Blast hits to 16472 proteins in 2614 species: Archae - 246; Bacteria - 11051; Metazoa - 5; Fungi - 314; Plants - 193; Viruses - 0; Other Eukaryotes - 4666 (source: NCBI BLink). & (reliability: 1246.0) & (original description: no original description)","protein_coding" "Kfl00096_0040","kfl00096_0040_v1.1","Klebsormidium nitens","(at1g76060 : 111.0) mutant has Embryo defect; EMBRYO DEFECTIVE 1793 (EMB1793); FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 47 Blast hits to 47 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)","protein_coding" "Kfl00097_0150","kfl00097_0150_v1.1","Klebsormidium nitens","(at1g26640 : 253.0) Amino acid kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048); Has 592 Blast hits to 592 proteins in 236 species: Archae - 208; Bacteria - 227; Metazoa - 7; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 506.0) & (original description: no original description)","protein_coding" "Kfl00098_0060","kfl00098_0060_v1.1","Klebsormidium nitens","(q40070|psbr_horvu : 102.0) Photosystem II 10 kDa polypeptide, chloroplast precursor - Hordeum vulgare (Barley) & (at1g79040 : 84.7) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.; photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)","protein_coding" "Kfl00098_0080","kfl00098_0080_v1.1","Klebsormidium nitens","(p27495|cb24_tobac : 391.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at2g34420 : 375.0) Photosystem II type I chlorophyll a/b-binding protein; photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (reliability: 750.0) & (original description: no original description)","protein_coding" "Kfl00098_0090","kfl00098_0090_v1.1","Klebsormidium nitens","(p27495|cb24_tobac : 389.0) Chlorophyll a-b binding protein 40, chloroplast precursor (LHCII type I CAB-40) (LHCP) - Nicotiana tabacum (Common tobacco) & (at1g29930 : 374.0) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.; chlorophyll A/B binding protein 1 (CAB1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: guard cell, juvenile leaf, cultured cell; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2419 Blast hits to 2339 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 324 (source: NCBI BLink). & (reliability: 748.0) & (original description: no original description)","protein_coding" "Kfl00100_0160","kfl00100_0160_v1.1","Klebsormidium nitens","(at5g23010 : 141.0) Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.; methylthioalkylmalate synthase 1 (MAM1); FUNCTIONS IN: 2-(2'-methylthio)ethylmalate synthase activity; INVOLVED IN: glucosinolate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), Pyruvate carboxyltransferase (InterPro:IPR000891); BEST Arabidopsis thaliana protein match is: 2-isopropylmalate synthase 2 (TAIR:AT5G23020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q39891|leu1_soybn : 130.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (reliability: 282.0) & (original description: no original description)","protein_coding" "Kfl00104_0080","kfl00104_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00106_0020","kfl00106_0020_v1.1","Klebsormidium nitens","(p16868|h2b4_volca : 167.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at5g59910 : 163.0) HTB4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)","protein_coding" "Kfl00109_g24","kfl00109_g24_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00111_0110","kfl00111_0110_v1.1","Klebsormidium nitens","(at1g07030 : 295.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G30160.1); Has 27351 Blast hits to 14015 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 11451; Fungi - 7735; Plants - 5292; Viruses - 0; Other Eukaryotes - 2867 (source: NCBI BLink). & (p29518|bt1_maize : 116.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 590.0) & (original description: no original description)","protein_coding" "Kfl00114_0010","kfl00114_0010_v1.1","Klebsormidium nitens","(at3g28430 : 244.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 488.0) & (original description: no original description)","protein_coding" "Kfl00115_0190","kfl00115_0190_v1.1","Klebsormidium nitens","(at3g26570 : 114.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "Kfl00116_0085","kfl00116_0085_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00118_0080","kfl00118_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00120_0260","kfl00120_0260_v1.1","Klebsormidium nitens","(at5g14260 : 545.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1090.0) & (original description: no original description)","protein_coding" "Kfl00122_0210","kfl00122_0210_v1.1","Klebsormidium nitens","(at1g05260 : 241.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p00434|perp7_brara : 222.0) Peroxidase P7 (EC 1.11.1.7) (TP7) - Brassica rapa (Turnip) & (reliability: 480.0) & (original description: no original description)","protein_coding" "Kfl00123_0060","kfl00123_0060_v1.1","Klebsormidium nitens","(at3g26570 : 123.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 246.0) & (original description: no original description)","protein_coding" "Kfl00123_0130","kfl00123_0130_v1.1","Klebsormidium nitens","(at5g61840 : 106.0) GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "Kfl00129_0260","kfl00129_0260_v1.1","Klebsormidium nitens","(at3g29200 : 263.0) L-ascorbate peroxidase; chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)","protein_coding" "Kfl00133_0280","kfl00133_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00134_0030","kfl00134_0030_v1.1","Klebsormidium nitens","(at1g48380 : 207.0) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.; ROOT HAIRLESS 1 (RHL1); FUNCTIONS IN: protein binding, DNA binding; INVOLVED IN: root hair initiation, DNA endoreduplication; LOCATED IN: nucleolus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 414.0) & (original description: no original description)","protein_coding" "Kfl00134_0230","kfl00134_0230_v1.1","Klebsormidium nitens","(at4g15920 : 114.0) Nodulin MtN3 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 980 Blast hits to 942 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 0; Plants - 645; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 228.0) & (original description: no original description)","protein_coding" "Kfl00143_0070","kfl00143_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00143_0130","kfl00143_0130_v1.1","Klebsormidium nitens","(at3g15520 : 329.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink). & (o49939|tlp40_spiol : 124.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (reliability: 658.0) & (original description: no original description)","protein_coding" "Kfl00146_0240","kfl00146_0240_v1.1","Klebsormidium nitens","(at2g45640 : 160.0) Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.; SIN3 associated polypeptide P18 (SAP18); FUNCTIONS IN: protein binding, transcription regulator activity; INVOLVED IN: response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sin3 associated polypeptide p18 (InterPro:IPR010516), Histone deacetylase complex, SAP18 subunit (InterPro:IPR017250). & (reliability: 320.0) & (original description: no original description)","protein_coding" "Kfl00147_0070","kfl00147_0070_v1.1","Klebsormidium nitens","(at3g51610 : 200.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 400.0) & (original description: no original description)","protein_coding" "Kfl00153_0120","kfl00153_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00153_g9","kfl00153_g9_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00156_0165","kfl00156_0165_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00160_0140","kfl00160_0140_v1.1","Klebsormidium nitens","(at4g15802 : 88.6) Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment.; heat shock factor binding protein (HSBP); CONTAINS InterPro DOMAIN/s: Heat shock factor binding 1 (InterPro:IPR009643); Has 319 Blast hits to 319 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 14; Plants - 74; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 177.2) & (original description: no original description)","protein_coding" "Kfl00165_g7","kfl00165_g7_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00170_g13","kfl00170_g13_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00180_0120","kfl00180_0120_v1.1","Klebsormidium nitens","(at2g43080 : 185.0) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (reliability: 370.0) & (original description: no original description)","protein_coding" "Kfl00183_g3","kfl00183_g3_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00185_0010","kfl00185_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00191_0110","kfl00191_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00195_0030","kfl00195_0030_v1.1","Klebsormidium nitens","(q7x9a6|ucria_wheat : 136.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Triticum aestivum (Wheat) & (at4g03280 : 128.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)","protein_coding" "Kfl00197_0010","kfl00197_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00200_0165","kfl00200_0165_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00202_0030","kfl00202_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00203_0080","kfl00203_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00204_0040","kfl00204_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00209_0030","kfl00209_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00218_0090","kfl00218_0090_v1.1","Klebsormidium nitens","(q9m5q1|fut1_pea : 164.0) Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1) - Pisum sativum (Garden pea) & (at2g15390 : 159.0) Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.; fucosyltransferase 4 (FUT4); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 5 (TAIR:AT2G15370.1); Has 339 Blast hits to 330 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 332; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)","protein_coding" "Kfl00226_0060","kfl00226_0060_v1.1","Klebsormidium nitens","(at3g26570 : 507.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 1014.0) & (original description: no original description)","protein_coding" "Kfl00234_0140","kfl00234_0140_v1.1","Klebsormidium nitens","(at3g26570 : 120.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)","protein_coding" "Kfl00238_0115","kfl00238_0115_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00240_0030","kfl00240_0030_v1.1","Klebsormidium nitens","(at1g26270 : 417.0) Phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 7 (TAIR:AT2G03890.1); Has 671 Blast hits to 650 proteins in 184 species: Archae - 0; Bacteria - 8; Metazoa - 176; Fungi - 103; Plants - 278; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 832.0) & (original description: no original description)","protein_coding" "Kfl00243_0040","kfl00243_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00244_g5","kfl00244_g5_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00246_0060","kfl00246_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00247_0210","kfl00247_0210_v1.1","Klebsormidium nitens","(at3g06310 : 129.0) Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G18800.2). & (reliability: 258.0) & (original description: no original description)","protein_coding" "Kfl00252_0080","kfl00252_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00253_0040","kfl00253_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00253_0090","kfl00253_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00254_0140","kfl00254_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00256_0070","kfl00256_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00258_0030","kfl00258_0030_v1.1","Klebsormidium nitens","(at5g01600 : 275.0) Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ferretin 1 (FER1); FUNCTIONS IN: ferric iron binding, iron ion binding; INVOLVED IN: in 12 processes; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 4 (TAIR:AT2G40300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q41709|fri2_vigun : 272.0) Ferritin-2, chloroplast precursor (EC 1.16.3.1) - Vigna unguiculata (Cowpea) & (reliability: 550.0) & (original description: no original description)","protein_coding" "Kfl00260_0210","kfl00260_0210_v1.1","Klebsormidium nitens","(at5g12200 : 588.0) Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.; pyrimidine 2 (PYD2); CONTAINS InterPro DOMAIN/s: D-hydantoinase (InterPro:IPR011778), Amidohydrolase 1 (InterPro:IPR006680), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: allantoinase (TAIR:AT4G04955.1); Has 11476 Blast hits to 11454 proteins in 2253 species: Archae - 299; Bacteria - 6727; Metazoa - 670; Fungi - 189; Plants - 91; Viruses - 0; Other Eukaryotes - 3500 (source: NCBI BLink). & (reliability: 1176.0) & (original description: no original description)","protein_coding" "Kfl00270_0220","kfl00270_0220_v1.1","Klebsormidium nitens","(at5g14600 : 319.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: tRNA (adenine-N1-)-methyltransferase activity; INVOLVED IN: tRNA methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: tRNA methyltransferase complex GCD14 subunit (InterPro:IPR014816); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 638.0) & (original description: no original description)","protein_coding" "Kfl00272_0060","kfl00272_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00282_0020","kfl00282_0020_v1.1","Klebsormidium nitens","(at3g49500 : 519.0) Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.; RNA-dependent RNA polymerase 6 (RDR6); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 1 (TAIR:AT1G14790.1); Has 633 Blast hits to 609 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 284; Plants - 204; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 1038.0) & (original description: no original description)","protein_coding" "Kfl00286_0080","kfl00286_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00287_0180","kfl00287_0180_v1.1","Klebsormidium nitens","(at5g65840 : 82.4) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G37240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)","protein_coding" "Kfl00288_0120","kfl00288_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00289_0060","kfl00289_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00295_0130","kfl00295_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00296_0130","kfl00296_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00300_0100","kfl00300_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00302_0090","kfl00302_0090_v1.1","Klebsormidium nitens","(at4g25720 : 229.0) This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.; glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)","protein_coding" "Kfl00303_0050","kfl00303_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00314_0120","kfl00314_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00319_0060","kfl00319_0060_v1.1","Klebsormidium nitens","(at5g22330 : 700.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (reliability: 1400.0) & (original description: no original description)","protein_coding" "Kfl00319_g4","kfl00319_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00335_0120","kfl00335_0120_v1.1","Klebsormidium nitens","(p93163|gpa2_soybn : 321.0) Guanine nucleotide-binding protein alpha-2 subunit (GP-alpha-2) - Glycine max (Soybean) & (at2g26300 : 311.0) Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.; G protein alpha subunit 1 (GP ALPHA 1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 16 processes; LOCATED IN: plasma membrane, endoplasmic reticulum membrane, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant G-protein, alpha subunit (InterPro:IPR002976), Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3745 Blast hits to 3647 proteins in 408 species: Archae - 0; Bacteria - 0; Metazoa - 2360; Fungi - 766; Plants - 268; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (reliability: 622.0) & (original description: no original description)","protein_coding" "Kfl00340_0140","kfl00340_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00347_0060","kfl00347_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00347_0100","kfl00347_0100_v1.1","Klebsormidium nitens","(at3g49660 : 157.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93107|pf20_chlre : 150.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 314.0) & (original description: no original description)","protein_coding" "Kfl00353_g14","kfl00353_g14_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00361_0010","kfl00361_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00362_0140","kfl00362_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00368_0040","kfl00368_0040_v1.1","Klebsormidium nitens","(at5g61220 : 82.0) LYR family of Fe/S cluster biogenesis protein; CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description)","protein_coding" "Kfl00369_0060","kfl00369_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00369_0080","kfl00369_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00370_0070","kfl00370_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00372_0050","kfl00372_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00376_0120","kfl00376_0120_v1.1","Klebsormidium nitens","(at5g10720 : 83.2) member of Histidine Kinase; histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)","protein_coding" "Kfl00379_0040","kfl00379_0040_v1.1","Klebsormidium nitens","(at3g26570 : 106.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 212.0) & (original description: no original description)","protein_coding" "Kfl00388_0110","kfl00388_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00400_0090","kfl00400_0090_v1.1","Klebsormidium nitens","(at2g03270 : 791.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 1582.0) & (original description: no original description)","protein_coding" "Kfl00412_0080","kfl00412_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00424_0060","kfl00424_0060_v1.1","Klebsormidium nitens","(at3g19184 : 87.0) AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G42700.1); Has 304 Blast hits to 291 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "Kfl00428_0100","kfl00428_0100_v1.1","Klebsormidium nitens","(at1g20880 : 155.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1). & (q03878|grp1_dauca : 82.8) Glycine-rich RNA-binding protein - Daucus carota (Carrot) & (reliability: 310.0) & (original description: no original description)","protein_coding" "Kfl00428_0140","kfl00428_0140_v1.1","Klebsormidium nitens","(at1g76450 : 164.0) Photosystem II reaction center PsbP family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 328.0) & (original description: no original description)","protein_coding" "Kfl00434_0160","kfl00434_0160_v1.1","Klebsormidium nitens","(at5g49550 : 88.2) Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.; CONTAINS InterPro DOMAIN/s: Biogenesis of lysosome-related organelles complex-1, subunit 2 (InterPro:IPR019269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description)","protein_coding" "Kfl00453_0170","kfl00453_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00460_0100","kfl00460_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00468_0100","kfl00468_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00469_0070","kfl00469_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00474_0030","kfl00474_0030_v1.1","Klebsormidium nitens","(p29618|cdc21_orysa : 217.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (at3g48750 : 215.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (reliability: 430.0) & (original description: no original description)","protein_coding" "Kfl00477_0070","kfl00477_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00492_0080","kfl00492_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00526_0065","kfl00526_0065_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00528_0030","kfl00528_0030_v1.1","Klebsormidium nitens","(at2g34470 : 339.0) Encodes a urease accessory protein which is essential for the activation of plant urease.; urease accessory protein G (UREG); FUNCTIONS IN: nickel ion binding, nucleotide binding, metal ion binding, ATP binding; INVOLVED IN: nitrogen compound metabolic process, positive regulation of metalloenzyme activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Urease accessory protein UreG (InterPro:IPR004400), [NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase (InterPro:IPR012202), Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 678.0) & (original description: no original description)","protein_coding" "Kfl00537_0060","kfl00537_0060_v1.1","Klebsormidium nitens","(at1g32500 : 323.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 6 (NAP6); CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 9763 Blast hits to 9763 proteins in 1806 species: Archae - 246; Bacteria - 6215; Metazoa - 1; Fungi - 6; Plants - 107; Viruses - 0; Other Eukaryotes - 3188 (source: NCBI BLink). & (reliability: 646.0) & (original description: no original description)","protein_coding" "Kfl00559_0050","kfl00559_0050_v1.1","Klebsormidium nitens","(at1g04080 : 411.0) PRP39; INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase; LOCATED IN: intracellular; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1). & (reliability: 822.0) & (original description: no original description)","protein_coding" "Kfl00561_0050","kfl00561_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00567_0040","kfl00567_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00622_0030","kfl00622_0030_v1.1","Klebsormidium nitens","(at3g04790 : 320.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (reliability: 640.0) & (original description: no original description)","protein_coding" "Kfl00625_0020","kfl00625_0020_v1.1","Klebsormidium nitens","(q41009|toc34_pea : 231.0) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) - Pisum sativum (Garden pea) & (at5g05000 : 226.0) Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.; translocon at the outer envelope membrane of chloroplasts 34 (TOC34); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: protein targeting to chloroplast, chloroplast localization; LOCATED IN: chloroplast outer membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 33 (TAIR:AT1G02280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)","protein_coding" "Kfl00641_0020","kfl00641_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00663_0020","kfl00663_0020_v1.1","Klebsormidium nitens","(at2g47450 : 272.0) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.; CHAOS (CAO); FUNCTIONS IN: chromatin binding; INVOLVED IN: response to high light intensity, protein import into chloroplast thylakoid membrane; LOCATED IN: chloroplast thylakoid membrane, chloroplast, signal recognition particle, chloroplast targeting, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Chromo domain-like (InterPro:IPR016197), Chromo domain (InterPro:IPR000953), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing protein 2 (TAIR:AT4G35450.5); Has 25373 Blast hits to 13489 proteins in 848 species: Archae - 87; Bacteria - 2575; Metazoa - 11620; Fungi - 2006; Plants - 1049; Viruses - 137; Other Eukaryotes - 7899 (source: NCBI BLink). & (q8lsq2|sr43c_orysa : 269.0) Probable signal recognition particle 43 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (reliability: 544.0) & (original description: no original description)","protein_coding" "Kfl00673_g9","No alias","Klebsormidium nitens","No description available","protein_coding" "Kfl00675_0060","kfl00675_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00684_0080","kfl00684_0080_v1.1","Klebsormidium nitens","(at2g34260 : 301.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 602.0) & (original description: no original description)","protein_coding" "Kfl00693_0050","kfl00693_0050_v1.1","Klebsormidium nitens","(at1g48850 : 509.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1018.0) & (original description: no original description)","protein_coding" "Kfl00703_0020","kfl00703_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00705_0040","kfl00705_0040_v1.1","Klebsormidium nitens","(at3g26570 : 113.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description)","protein_coding" "Kfl00710_0030","kfl00710_0030_v1.1","Klebsormidium nitens","(at3g48170 : 123.0) Arabidopsis thaliana putative betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A9 (ALDH10A9); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A8 (TAIR:AT1G74920.1); Has 62829 Blast hits to 62511 proteins in 3057 species: Archae - 483; Bacteria - 36293; Metazoa - 2617; Fungi - 2126; Plants - 2053; Viruses - 0; Other Eukaryotes - 19257 (source: NCBI BLink). & (p17202|badh_spiol : 119.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 246.0) & (original description: no original description)","protein_coding" "Kfl00726_0070","kfl00726_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00735_g3","kfl00735_g3_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00751_0050","kfl00751_0050_v1.1","Klebsormidium nitens","(at1g05350 : 446.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, catalytic activity, cofactor binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: SUMO-activating enzyme 2 (TAIR:AT2G21470.1); Has 12729 Blast hits to 12531 proteins in 2437 species: Archae - 211; Bacteria - 8204; Metazoa - 1010; Fungi - 713; Plants - 367; Viruses - 0; Other Eukaryotes - 2224 (source: NCBI BLink). & (reliability: 892.0) & (original description: no original description)","protein_coding" "Kfl00772_0030","kfl00772_0030_v1.1","Klebsormidium nitens","(at2g37500 : 507.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1014.0) & (original description: no original description)","protein_coding" "Kfl00797_0010","kfl00797_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00818_0040","kfl00818_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00841_0040","kfl00841_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00860_0050","kfl00860_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00865_0010","kfl00865_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00905_0055","kfl00905_0055_v1.1","Klebsormidium nitens","(at4g19110 : 231.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G45430.2); Has 112836 Blast hits to 111739 proteins in 3697 species: Archae - 107; Bacteria - 12214; Metazoa - 43480; Fungi - 11684; Plants - 25102; Viruses - 509; Other Eukaryotes - 19740 (source: NCBI BLink). & (q07176|mmk1_medsa : 171.0) Mitogen-activated protein kinase homolog MMK1 (EC 2.7.11.24) (MAP kinase MSK7) (MAP kinase ERK1) - Medicago sativa (Alfalfa) & (reliability: 452.0) & (original description: no original description)","protein_coding" "Kfl00938_0020","kfl00938_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00940_0060","kfl00940_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00991_0010","kfl00991_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01047_0010","kfl01047_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01167_0010","kfl01167_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01213_0020","kfl01213_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01221_0020","kfl01221_0020_v1.1","Klebsormidium nitens","(at3g26570 : 282.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description)","protein_coding" "Kfl01239_g1","No alias","Klebsormidium nitens","No description available","protein_coding" "Kfl01279_0010","kfl01279_0010_v1.1","Klebsormidium nitens","(at2g30070 : 420.0) Encodes a high affinity potassium transporter.; potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). & (q7xiv8|hak9_orysa : 412.0) Probable potassium transporter 9 (OsHAK9) - Oryza sativa (Rice) & (reliability: 840.0) & (original description: no original description)","protein_coding" "Kfl01288_0010","kfl01288_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01293_0020","kfl01293_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01434_0010","kfl01434_0010_v1.1","Klebsormidium nitens","(p27493|cb22_tobac : 410.0) Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g27690 : 400.0) Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.; photosystem II light harvesting complex gene 2.3 (LHCB2.3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2373 Blast hits to 2310 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2058; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink). & (reliability: 800.0) & (original description: no original description)","protein_coding" "Kfl01458_g1","kfl01458_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01467_g1","No alias","Klebsormidium nitens","No description available","protein_coding" "Kfl01498_g2","kfl01498_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01526_g1","kfl01526_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01536_0020","kfl01536_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01586_0010","kfl01586_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "LOC_Os01g02070","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding" "LOC_Os01g07090","No alias","Oryza sativa","5-azacytidine resistance protein azr1, putative, expressed","protein_coding" "LOC_Os01g10210","No alias","Oryza sativa","lachrymatory factor synthase, putative, expressed","protein_coding" "LOC_Os01g11946","No alias","Oryza sativa","ABC transporter, ATP-binding protein, putative, expressed","protein_coding" "LOC_Os01g13470","No alias","Oryza sativa","KH domain containing protein, putative, expressed","protein_coding" "LOC_Os01g13540","No alias","Oryza sativa","NIN, putative, expressed","protein_coding" "LOC_Os01g38850","No alias","Oryza sativa","receptor-like serine-threonine protein kinase, putative, expressed","protein_coding" "LOC_Os01g51520","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os01g53980","No alias","Oryza sativa","IQ calmodulin-binding motif family protein, expressed","protein_coding" "LOC_Os01g55630","No alias","Oryza sativa","glutelin, putative, expressed","protein_coding" "LOC_Os01g62460","No alias","Oryza sativa","ZOS1-16 - C2H2 zinc finger protein, expressed","protein_coding" "LOC_Os01g62860","No alias","Oryza sativa","oxidoreductase, aldo/keto reductase family protein, putative, expressed","protein_coding" "LOC_Os01g63230","No alias","Oryza sativa","growth regulator related protein, putative, expressed","protein_coding" "LOC_Os01g67040","No alias","Oryza sativa","OsRhmbd5 - Putative Rhomboid homologue, expressed","protein_coding" "LOC_Os02g02520","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g02980","No alias","Oryza sativa","MATE domain containing protein, expressed","protein_coding" "LOC_Os02g22100","No alias","Oryza sativa","OsRhmbd6 - Putative Rhomboid homologue, expressed","protein_coding" "LOC_Os02g30440","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g38020","No alias","Oryza sativa","inorganic phosphate transporter 2-1, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os02g42450","No alias","Oryza sativa","RIPER1 - Ripening-related family protein precursor, expressed","protein_coding" "LOC_Os02g43510","No alias","Oryza sativa","GDP-L-fucose synthase 1, putative, expressed","protein_coding" "LOC_Os02g47800","No alias","Oryza sativa","monodehydroascorbate reductase, putative, expressed","protein_coding" "LOC_Os02g49870","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os02g50780","No alias","Oryza sativa","glycosyl hydrolase family 47 domain contain protein, expressed","protein_coding" "LOC_Os02g52650","No alias","Oryza sativa","chlorophyll A-B binding protein, putative, expressed","protein_coding" "LOC_Os03g01014","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os03g08070","No alias","Oryza sativa","copper-transporting ATPase PAA1, putative, expressed","protein_coding" "LOC_Os03g15020","No alias","Oryza sativa","beta-galactosidase precursor, putative, expressed","protein_coding" "LOC_Os03g28300","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding" "LOC_Os03g29970","No alias","Oryza sativa","histone-like transcription factor and archaeal histone, putative, expressed","protein_coding" "LOC_Os03g42810","No alias","Oryza sativa","endonuclease/exonuclease/phosphatase family domain containing protein, expressed","protein_coding" "LOC_Os03g44760","No alias","Oryza sativa","SWI1, putative, expressed","protein_coding" "LOC_Os03g50070","No alias","Oryza sativa","DUF1295 domain containing protein, putative, expressed","protein_coding" "LOC_Os03g59110","No alias","Oryza sativa","pheophorbide a oxygenase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os03g62080","No alias","Oryza sativa","mRNA-decapping enzyme, putative, expressed","protein_coding" "LOC_Os04g26440","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g28790","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g38600","No alias","Oryza sativa","glyceraldehyde-3-phosphate dehydrogenase, putative, expressed","protein_coding" "LOC_Os04g41340","No alias","Oryza sativa","4-nitrophenylphosphatase, putative, expressed","protein_coding" "LOC_Os04g51020","No alias","Oryza sativa","hypothetical protein","protein_coding" "LOC_Os04g52330","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os04g53310","No alias","Oryza sativa","soluble starch synthase 3, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os04g57819","No alias","Oryza sativa","DHHC zinc finger domain containing protein, expressed","protein_coding" "LOC_Os04g58940","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g01240","No alias","Oryza sativa","AML1, putative, expressed","protein_coding" "LOC_Os05g01520","No alias","Oryza sativa","ECT protein, putative, expressed","protein_coding" "LOC_Os05g01530","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g01820","No alias","Oryza sativa","cytochrome b5-like Heme/Steroid binding domain containing protein, expressed","protein_coding" "LOC_Os05g02060","No alias","Oryza sativa","mitochondrial import inner membrane translocase subunit Tim17, putative, expressed","protein_coding" "LOC_Os05g02420","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g04610","No alias","Oryza sativa","ABC transporter, ATP-binding protein, putative, expressed","protein_coding" "LOC_Os05g08230","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g16280","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os05g38030","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g38150","No alias","Oryza sativa","amino acid kinase, putative, expressed","protein_coding" "LOC_Os05g43650","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os05g44300","No alias","Oryza sativa","plant-specific domain TIGR01615 family protein, expressed","protein_coding" "LOC_Os05g46460","No alias","Oryza sativa","hydrolase, alpha/beta fold family domain containing protein, expressed","protein_coding" "LOC_Os05g47560","No alias","Oryza sativa","serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os05g47700","No alias","Oryza sativa","LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding" "LOC_Os05g48500","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os06g06080","No alias","Oryza sativa","serine esterase family protein, putative, expressed","protein_coding" "LOC_Os06g06380","No alias","Oryza sativa","NBS-LRR type disease resistance protein, putative, expressed","protein_coding" "LOC_Os06g14324","No alias","Oryza sativa","caleosin related protein, putative, expressed","protein_coding" "LOC_Os06g22060","No alias","Oryza sativa","pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed","protein_coding" "LOC_Os06g24070","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, expressed","protein_coding" "LOC_Os06g25439","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family protein, putative, expressed","protein_coding" "LOC_Os06g40940","No alias","Oryza sativa","glycine dehydrogenase, putative, expressed","protein_coding" "LOC_Os06g44220","No alias","Oryza sativa","OsRCI2-9 - Putative low temperature and salt responsive protein, expressed","protein_coding" "LOC_Os06g51290","No alias","Oryza sativa","phytoene synthase, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os07g02780","No alias","Oryza sativa","STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed","protein_coding" "LOC_Os07g12330","No alias","Oryza sativa","tryptophan/tyrosine permease family protein, putative, expressed","protein_coding" "LOC_Os07g22110","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding" "LOC_Os07g28790","No alias","Oryza sativa","PAP fibrillin family domain containing protein, expressed","protein_coding" "LOC_Os07g29830","No alias","Oryza sativa","ankyrin repeat domain containing protein, expressed","protein_coding" "LOC_Os07g37420","No alias","Oryza sativa","versicolorin reductase, putative, expressed","protein_coding" "LOC_Os07g40974","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family protein, putative, expressed","protein_coding" "LOC_Os07g43700","No alias","Oryza sativa","lactate/malate dehydrogenase, putative, expressed","protein_coding" "LOC_Os07g47110","No alias","Oryza sativa","OsFBT11 - F-box and tubby domain containing protein, expressed","protein_coding" "LOC_Os08g06280","No alias","Oryza sativa","LSD1 zinc finger domain containing protein, expressed","protein_coding" "LOC_Os08g08500","No alias","Oryza sativa","reductase, putative, expressed","protein_coding" "LOC_Os08g16820","No alias","Oryza sativa","retrotransposon protein, putative, SINE subclass, expressed","protein_coding" "LOC_Os08g21561","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding" "LOC_Os08g33350","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g24210","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g24954","No alias","Oryza sativa","double-stranded RNA binding motif containing protein, expressed","protein_coding" "LOC_Os09g27400","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os09g33980","No alias","Oryza sativa","bromodomain protein 103, putative, expressed","protein_coding" "LOC_Os09g36060","No alias","Oryza sativa","endoglucanase, putative, expressed","protein_coding" "LOC_Os09g38410","No alias","Oryza sativa","sialin, putative, expressed","protein_coding" "LOC_Os10g02940","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g11240","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os10g21810","No alias","Oryza sativa","histidine kinase, putative, expressed","protein_coding" "LOC_Os10g22430","No alias","Oryza sativa","gibberellin response modulator protein, putative, expressed","protein_coding" "LOC_Os10g29470","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding" "LOC_Os11g01490","No alias","Oryza sativa","outer membrane protein, OMP85 family, putative, expressed","protein_coding" "LOC_Os11g03380","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g04020","No alias","Oryza sativa","major facilitator superfamily antiporter, putative, expressed","protein_coding" "LOC_Os11g24450","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding" "LOC_Os11g32810","No alias","Oryza sativa","Leucine Rich Repeat family protein, expressed","protein_coding" "LOC_Os11g36690","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g43180","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os11g43630","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding" "LOC_Os11g47970","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding" "LOC_Os12g01449","No alias","Oryza sativa","chloroplast unusual positioning protein, putative, expressed","protein_coding" "LOC_Os12g08770","No alias","Oryza sativa","photosystem I reaction center subunit N, chloroplast precursor, putative, expressed","protein_coding" "LOC_Os12g17150","No alias","Oryza sativa","expressed protein","protein_coding" "LOC_Os12g41880","No alias","Oryza sativa","nuclear transcription factor Y subunit, putative, expressed","protein_coding" "LOC_Os12g42730","No alias","Oryza sativa","mov34/MPN/PAD-1 family protein, expressed","protein_coding" "MA_10158313g0010","No alias","Picea abies","(at2g28080 : 87.8) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 175.6) & (original description: no original description)","protein_coding" "MA_10252326g0010","No alias","Picea abies"," (original description: no original description)","protein_coding" "MA_103595g0010","No alias","Picea abies","(at1g04920 : 1145.0) Encodes a protein with putative sucrose-phosphate synthase activity.; sucrose phosphate synthase 3F (SPS3F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose synthase (InterPro:IPR000368), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 1F (TAIR:AT5G20280.1); Has 8635 Blast hits to 8489 proteins in 1558 species: Archae - 393; Bacteria - 5603; Metazoa - 16; Fungi - 85; Plants - 793; Viruses - 0; Other Eukaryotes - 1745 (source: NCBI BLink). & (p31927|sps_maize : 1114.0) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose-phosphate glucosyltransferase) - Zea mays (Maize) & (reliability: 2290.0) & (original description: no original description)","protein_coding" "MA_10368951g0010","No alias","Picea abies","(at2g25605 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)","protein_coding" "MA_10426769g0020","No alias","Picea abies","(at1g78995 : 132.0) unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)","protein_coding" "MA_10427547g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10428463g0020","No alias","Picea abies","(at2g16640 : 175.0) multimeric translocon complex in the outer envelope membrane 132 (TOC132); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: translocon outer complex protein 120 (TAIR:AT3G16620.1); Has 7054 Blast hits to 4909 proteins in 545 species: Archae - 31; Bacteria - 596; Metazoa - 2433; Fungi - 793; Plants - 579; Viruses - 84; Other Eukaryotes - 2538 (source: NCBI BLink). & (reliability: 350.0) & (original description: no original description)","protein_coding" "MA_10428889g0010","No alias","Picea abies","(q43715|toc75_pea : 492.0) Protein TOC75, chloroplast precursor (75 kDa translocon at the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) - Pisum sativum (Garden pea) & (at3g46740 : 488.0) Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.; translocon at the outer envelope membrane of chloroplasts 75-III (TOC75-III); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to chloroplast, chloroplast organization, embryonic morphogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Chloroplast envelope protein translocase, IAP75 (InterPro:IPR005689), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT4G09080.1); Has 4030 Blast hits to 1859 proteins in 343 species: Archae - 0; Bacteria - 806; Metazoa - 1937; Fungi - 82; Plants - 633; Viruses - 22; Other Eukaryotes - 550 (source: NCBI BLink). & (reliability: 976.0) & (original description: no original description)","protein_coding" "MA_10430109g0020","No alias","Picea abies","(at1g12300 : 381.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 69404 Blast hits to 15469 proteins in 318 species: Archae - 6; Bacteria - 74; Metazoa - 1057; Fungi - 1243; Plants - 64555; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (q76c99|rf1_orysa : 379.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 736.0) & (original description: no original description)","protein_coding" "MA_10430707g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10430794g0020","No alias","Picea abies","(at1g24610 : 191.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)","protein_coding" "MA_10430997g0010","No alias","Picea abies","(at4g11800 : 86.3) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) & (original description: no original description)","protein_coding" "MA_10431582g0010","No alias","Picea abies","(at5g06220 : 145.0) LETM1-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G11560.4). & (reliability: 290.0) & (original description: no original description)","protein_coding" "MA_10431892g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10432069g0020","No alias","Picea abies","(at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1); FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G20500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o24146|4cl2_tobac : 270.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco) & (reliability: 712.0) & (original description: no original description)","protein_coding" "MA_10432580g0010","No alias","Picea abies","(at5g62000 : 779.0) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.; auxin response factor 2 (ARF2); FUNCTIONS IN: protein binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: auxin response factor 1 (TAIR:AT1G59750.2). & (reliability: 1558.0) & (original description: no original description)","protein_coding" "MA_10433091g0010","No alias","Picea abies","(at1g12700 : 328.0) ATP binding;nucleic acid binding;helicases; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: embryo; EXPRESSED DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 84744 Blast hits to 32036 proteins in 2584 species: Archae - 123; Bacteria - 11324; Metazoa - 2691; Fungi - 2451; Plants - 63733; Viruses - 4; Other Eukaryotes - 4418 (source: NCBI BLink). & (q76c99|rf1_orysa : 308.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: no original description)","protein_coding" "MA_10433434g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_10435227g0010","No alias","Picea abies","(at4g02900 : 534.0) ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). & (reliability: 1068.0) & (original description: no original description)","protein_coding" "MA_10435791g0010","No alias","Picea abies","(at2g38280 : 604.0) Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.; EMBRYONIC FACTOR1 (FAC1); FUNCTIONS IN: AMP deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, nucleus, microsome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365), Adenosine/AMP deaminase active site (InterPro:IPR006650), AMP deaminase (InterPro:IPR006329); Has 1191 Blast hits to 1128 proteins in 362 species: Archae - 0; Bacteria - 226; Metazoa - 390; Fungi - 271; Plants - 78; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (q84np7|ampd_orysa : 585.0) Probable AMP deaminase (EC 3.5.4.6) - Oryza sativa (Rice) & (reliability: 1208.0) & (original description: no original description)","protein_coding" "MA_10435890g0030","No alias","Picea abies","(at5g19740 : 100.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)","protein_coding" "MA_117650g0010","No alias","Picea abies","(at1g11290 : 615.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (q76c99|rf1_orysa : 145.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1230.0) & (original description: no original description)","protein_coding" "MA_125123g0020","No alias","Picea abies","(at4g14605 : 94.7) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1482 Blast hits to 884 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 0; Plants - 1279; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 189.4) & (original description: no original description)","protein_coding" "MA_14663g0020","No alias","Picea abies","(at4g36220 : 335.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o48923|c71da_soybn : 323.0) Cytochrome P450 71D10 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 670.0) & (original description: no original description)","protein_coding" "MA_180129g0010","No alias","Picea abies","(at4g36220 : 330.0) encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.; ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). & (o48923|c71da_soybn : 316.0) Cytochrome P450 71D10 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 644.0) & (original description: no original description)","protein_coding" "MA_180505g0010","No alias","Picea abies","(at4g30610 : 462.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (p52711|cbp23_horvu : 462.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 910.0) & (original description: no original description)","protein_coding" "MA_18900g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_218141g0010","No alias","Picea abies","(at1g06980 : 137.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)","protein_coding" "MA_263854g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_285982g0010","No alias","Picea abies","(at1g70740 : 230.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1). & (q8lkz1|nork_pea : 159.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 452.0) & (original description: no original description)","protein_coding" "MA_315961g0010","No alias","Picea abies","(at1g33780 : 283.0) Protein of unknown function (DUF179); LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT3G29240.2); Has 2552 Blast hits to 2552 proteins in 947 species: Archae - 0; Bacteria - 1880; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (reliability: 566.0) & (original description: no original description)","protein_coding" "MA_3181g0010","No alias","Picea abies","(at4g28080 : 84.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description)","protein_coding" "MA_324587g0010","No alias","Picea abies","(at1g32360 : 198.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 396.0) & (original description: no original description)","protein_coding" "MA_36115g0010","No alias","Picea abies","(at3g28040 : 850.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 223464 Blast hits to 137757 proteins in 4468 species: Archae - 159; Bacteria - 21919; Metazoa - 74524; Fungi - 10664; Plants - 90017; Viruses - 245; Other Eukaryotes - 25936 (source: NCBI BLink). & (p93194|rpk1_iponi : 275.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1700.0) & (original description: no original description)","protein_coding" "MA_374514g0010","No alias","Picea abies","(at5g16715 : 353.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (reliability: 706.0) & (original description: no original description)","protein_coding" "MA_3928409g0010","No alias","Picea abies","(at4g28080 : 84.7) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G01320.2); Has 11837 Blast hits to 4947 proteins in 554 species: Archae - 95; Bacteria - 3252; Metazoa - 4987; Fungi - 1783; Plants - 350; Viruses - 14; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)","protein_coding" "MA_479907g0010","No alias","Picea abies","(at5g64330 : 649.0) Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.; NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G30440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5ks50|nph3_orysa : 585.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1298.0) & (original description: no original description)","protein_coding" "MA_54668g0010","No alias","Picea abies","(q6h501|hkt6_orysa : 310.0) Probable cation transporter HKT6 (OsHKT6) - Oryza sativa (Rice) & (at4g10310 : 303.0) encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.; high-affinity K+ transporter 1 (HKT1); CONTAINS InterPro DOMAIN/s: Potassium transport protein, high-affinity (InterPro:IPR004773), Cation transporter (InterPro:IPR003445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description)","protein_coding" "MA_58118g0010","No alias","Picea abies","(at5g48385 : 202.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT4G14900.1); Has 1269 Blast hits to 1187 proteins in 101 species: Archae - 0; Bacteria - 22; Metazoa - 72; Fungi - 9; Plants - 1133; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 404.0) & (original description: no original description)","protein_coding" "MA_6390g0010","No alias","Picea abies","(at3g26570 : 386.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 772.0) & (original description: no original description)","protein_coding" "MA_6609516g0010","No alias","Picea abies",""(at5g36110 : 185.0) member of CYP716A; ""cytochrome P450, family 716, subfamily A, polypeptide 1"" (CYP716A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 2 (TAIR:AT5G36140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9axh9|kao1_horvu : 102.0) Ent-kaurenoic acid oxidase 1 (EC 1.14.13.79) (gpr5) - Hordeum vulgare (Barley) & (reliability: 370.0) & (original description: no original description)"","protein_coding" "MA_78267g0010","No alias","Picea abies",""(at3g48310 : 197.0) putative cytochrome P450; ""cytochrome P450, family 71, subfamily A, polypeptide 22"" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink). & (p37118|c71a2_solme : 174.0) Cytochrome P450 71A2 (EC 1.14.-.-) (CYPLXXIA2) (P-450EG4) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 394.0) & (original description: no original description)"","protein_coding" "MA_8507901g0010","No alias","Picea abies","(at3g26140 : 373.0) Cellulase (glycosyl hydrolase family 5) protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Cellulase (glycosyl hydrolase family 5) protein (TAIR:AT1G13130.1); Has 359 Blast hits to 351 proteins in 117 species: Archae - 8; Bacteria - 143; Metazoa - 0; Fungi - 82; Plants - 110; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 746.0) & (original description: no original description)","protein_coding" "MA_86494g0010","No alias","Picea abies","(at5g17230 : 553.0) Encodes phytoene synthase.; PHYTOENE SYNTHASE (PSY); CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 5365 Blast hits to 5364 proteins in 1001 species: Archae - 81; Bacteria - 2469; Metazoa - 28; Fungi - 64; Plants - 1002; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink). & (p37272|psy_capan : 547.0) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (reliability: 1106.0) & (original description: no original description)","protein_coding" "MA_89112g0010","No alias","Picea abies","(at2g21860 : 558.0) violaxanthin de-epoxidase-related; BEST Arabidopsis thaliana protein match is: non-photochemical quenching 1 (TAIR:AT1G08550.2); Has 151 Blast hits to 151 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 1116.0) & (original description: no original description)","protein_coding" "MA_894439g0010","No alias","Picea abies","(at2g30100 : 382.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27; Bacteria - 7834; Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 764.0) & (original description: no original description)","protein_coding" "MA_8981804g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_93349g0010","No alias","Picea abies","(at3g07810 : 269.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (p49313|roc1_nicpl : 102.0) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 538.0) & (original description: no original description)","protein_coding" "MA_947346g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_9798g0010","No alias","Picea abies","(at5g58950 : 408.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8l4h4|nork_medtr : 109.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 816.0) & (original description: no original description)","protein_coding" "Mp1g00610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g00890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g01520.1","No alias","Marchantia polymorpha","clade C phosphatase","protein_coding" "Mp1g01610.1","No alias","Marchantia polymorpha","component FtsZ1 of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding" "Mp1g04670.1","No alias","Marchantia polymorpha","F-box only protein 6 OS=Arabidopsis thaliana (sp|q9fzk1|fbx6_arath : 216.0)","protein_coding" "Mp1g04840.1","No alias","Marchantia polymorpha","glycerol-3-phosphate acyltransferase (GPAT9)","protein_coding" "Mp1g05040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g07990.1","No alias","Marchantia polymorpha","class II/ASH1 histone methyltransferase component of histone lysine methylation/demethylation","protein_coding" "Mp1g09690.1","No alias","Marchantia polymorpha","carboxypeptidase (SOL)","protein_coding" "Mp1g09740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g13170.1","No alias","Marchantia polymorpha","DNA-directed RNA polymerase subunit beta OS=Marchantia polymorpha (sp|p06272|rpob_marpo : 176.0)","protein_coding" "Mp1g13180.1","No alias","Marchantia polymorpha","component PIG-Q of GPI N-acetylglucosamine transferase complex","protein_coding" "Mp1g13190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g15690.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g16510.1","No alias","Marchantia polymorpha","component ELF4 of circadian clock Evening complex (EC)","protein_coding" "Mp1g17400.1","No alias","Marchantia polymorpha","Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana (sp|q9fn03|uvr8_arath : 159.0)","protein_coding" "Mp1g18760.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 192.5) & Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea (sp|p32260|cyskp_spiol : 167.0)","protein_coding" "Mp1g19340.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g19940.1","No alias","Marchantia polymorpha","transport protein ATM of mitochondrial ISC system export machinery. subfamily ABCB transporter","protein_coding" "Mp1g20980.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g21470.1","No alias","Marchantia polymorpha","component SWC2 of SWR1 chromatin remodeling complex","protein_coding" "Mp1g23210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g25020.1","No alias","Marchantia polymorpha","transcription factor (TFIIIa). C2H2 zinc finger transcription factor","protein_coding" "Mp1g29140.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp1g29370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g03830.1","No alias","Marchantia polymorpha","large subunit of TFIIIf transcription factor complex","protein_coding" "Mp2g04130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g04850.1","No alias","Marchantia polymorpha","phosphatidylinositol 3-phosphate 5-kinase (FAB1)","protein_coding" "Mp2g05230.1","No alias","Marchantia polymorpha","Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana (sp|q8l586|y4958_arath : 159.0)","protein_coding" "Mp2g05800.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g06200.1","No alias","Marchantia polymorpha","Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana (sp|q96533|adhx_arath : 375.0)","protein_coding" "Mp2g08090.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g09330.1","No alias","Marchantia polymorpha","solute transporter (MTCC)","protein_coding" "Mp2g09490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g10240.1","No alias","Marchantia polymorpha","tyrosyl-DNA phosphodiesterase (TDP1)","protein_coding" "Mp2g10850.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g11900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g12740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g14110.1","No alias","Marchantia polymorpha","transcription factor (mTERF)","protein_coding" "Mp2g14190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g14530.1","No alias","Marchantia polymorpha","L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana (sp|q9m2s4|lrks4_arath : 304.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 128.2)","protein_coding" "Mp2g14720.1","No alias","Marchantia polymorpha","Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 295.5) & Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare (sp|q02437|e13d_horvu : 221.0)","protein_coding" "Mp2g15200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g16880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g16970.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g17740.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g18500.1","No alias","Marchantia polymorpha","M3-class metalloprotease","protein_coding" "Mp2g19030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp2g20090.1","No alias","Marchantia polymorpha","chaperone HSCB of mitochondrial ISC system transfer phase","protein_coding" "Mp2g20640.1","No alias","Marchantia polymorpha","phosphate transporter (PHT1). phosphate transporter (PHT1)","protein_coding" "Mp2g20650.1","No alias","Marchantia polymorpha","phosphate transporter (PHT1). phosphate transporter (PHT1)","protein_coding" "Mp2g23620.1","No alias","Marchantia polymorpha","mechanosensitive ion channel (MSL)","protein_coding" "Mp2g24450.1","No alias","Marchantia polymorpha","Thaumatin-like protein OS=Olea europaea (sp|e3su11|all13_oleeu : 87.8)","protein_coding" "Mp2g25540.1","No alias","Marchantia polymorpha","Probable 2-oxoglutarate-dependent dioxygenase ANS OS=Arabidopsis thaliana (sp|o80449|diox4_arath : 189.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 127.2)","protein_coding" "Mp2g25900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g00830.1","No alias","Marchantia polymorpha","component Tic40 of inner envelope TIC translocation system","protein_coding" "Mp3g00970.1","No alias","Marchantia polymorpha","aromatic amino acid transporter (HAAAP)","protein_coding" "Mp3g03770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g05010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g05830.1","No alias","Marchantia polymorpha","non-haem ferritin","protein_coding" "Mp3g06560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g07060.1","No alias","Marchantia polymorpha","exoribonuclease (RNase R)","protein_coding" "Mp3g07640.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g08900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g08960.1","No alias","Marchantia polymorpha","subunit beta of pyruvate dehydrogenase E1 component subcomplex","protein_coding" "Mp3g10000.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g10800.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g13130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g14180.1","No alias","Marchantia polymorpha","xylosyltransferase (IRX14)","protein_coding" "Mp3g14770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g21740.1","No alias","Marchantia polymorpha","alpha dioxygenase","protein_coding" "Mp3g22870.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g25160.1","No alias","Marchantia polymorpha","Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana (sp|q39112|gaox3_arath : 182.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 134.4)","protein_coding" "Mp4g00070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g00120.1","No alias","Marchantia polymorpha","Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Petunia hybrida (sp|e9l7a5|pat_pethy : 143.0)","protein_coding" "Mp4g01230.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana (sp|q9sz52|pp344_arath : 388.0)","protein_coding" "Mp4g01460.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g01810.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g02120.1","No alias","Marchantia polymorpha","EF-P translation elongation factor","protein_coding" "Mp4g03570.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g04390.1","No alias","Marchantia polymorpha","N-succinyl 5-aminoimidazole-4-carboxamide RN synthase","protein_coding" "Mp4g04680.1","No alias","Marchantia polymorpha","Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana (sp|q9zsa7|dlo2_arath : 183.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 119.6)","protein_coding" "Mp4g05210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g05760.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g06170.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding" "Mp4g06260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g06390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g08830.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g09030.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g10650.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g10980.1","No alias","Marchantia polymorpha","PLANTKAP nucleocytoplasmic transport karyopherin","protein_coding" "Mp4g12760.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g13220.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g13560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g14090.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g14120.1","No alias","Marchantia polymorpha","chalcone synthase","protein_coding" "Mp4g14810.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g14840.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g15400.1","No alias","Marchantia polymorpha","component KAE1 of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding" "Mp4g16040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g16100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g16560.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16570.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16580.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16590.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16600.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16610.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g16690.1","No alias","Marchantia polymorpha","protein kinase (ABC1)","protein_coding" "Mp4g17440.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g18160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g19670.1","No alias","Marchantia polymorpha","Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana (sp|q9siw2|chr35_arath : 324.0)","protein_coding" "Mp4g19700.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g19710.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g19900.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g19920.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g19930.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp4g20560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp4g21870.1","No alias","Marchantia polymorpha","component GRF of GRF-GIF transcriptional complex","protein_coding" "Mp4g21980.1","No alias","Marchantia polymorpha","Chalcone synthase OS=Hydrangea macrophylla (sp|o82144|chsy_hydmc : 90.9) & Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 75.9)","protein_coding" "Mp4g22000.1","No alias","Marchantia polymorpha","Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica (sp|q10mj1|cgep_orysj : 280.0)","protein_coding" "Mp4g22420.1","No alias","Marchantia polymorpha","Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana (sp|a2rvm0|tic32_arath : 106.0)","protein_coding" "Mp5g02010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g02420.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g05820.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g06780.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g07410.1","No alias","Marchantia polymorpha","Protein ORANGE, chloroplastic OS=Arabidopsis thaliana (sp|q9fkf4|orang_arath : 355.0)","protein_coding" "Mp5g08770.1","No alias","Marchantia polymorpha","monoacylglycerol lipase","protein_coding" "Mp5g09290.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 100.4)","protein_coding" "Mp5g09600.1","No alias","Marchantia polymorpha","receptor CrRLK1L chaperone (LLG)","protein_coding" "Mp5g09810.1","No alias","Marchantia polymorpha","plastidial mRNA processing factor (CRP1)","protein_coding" "Mp5g10390.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g10650.1","No alias","Marchantia polymorpha","component TRM82 of TRM8-TRM82 tRNA guanosine-methyltransferase complex","protein_coding" "Mp5g10690.1","No alias","Marchantia polymorpha","Peroxidase 15 OS=Ipomoea batatas (sp|q9leh3|per15_ipoba : 327.0)","protein_coding" "Mp5g10700.1","No alias","Marchantia polymorpha","Peroxidase 49 OS=Arabidopsis thaliana (sp|o23237|per49_arath : 303.0)","protein_coding" "Mp5g16820.1","No alias","Marchantia polymorpha","Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum (sp|p11670|prb1_tobac : 147.0)","protein_coding" "Mp5g16900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g16930.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g17020.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g19370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g19470.1","No alias","Marchantia polymorpha","mitochondrial NAD-dependent malate dehydrogenase","protein_coding" "Mp5g22730.1","No alias","Marchantia polymorpha","ABC transporter I family member 17 OS=Arabidopsis thaliana (sp|q9c9w0|ab17i_arath : 279.0)","protein_coding" "Mp6g00660.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g00740.1","No alias","Marchantia polymorpha","subunit beta of E1 pyruvate dehydrogenase component","protein_coding" "Mp6g00750.1","No alias","Marchantia polymorpha","HOPS-specific component VPS41/VAM2 of HOPS/CORVET membrane tethering complexes","protein_coding" "Mp6g02940.1","No alias","Marchantia polymorpha","MCP2 programmed cell death metacaspase-like regulator","protein_coding" "Mp6g02980.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g03310.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g07710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g08310.1","No alias","Marchantia polymorpha","ammonium transporter (AMT1)","protein_coding" "Mp6g10260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g11450.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g12400.1","No alias","Marchantia polymorpha","chromatin remodeling factor (SHPRH)","protein_coding" "Mp6g12540.1","No alias","Marchantia polymorpha","Beta-arabinofuranosyltransferase RAY1 OS=Arabidopsis thaliana (sp|f4i6v0|ray1_arath : 360.0)","protein_coding" "Mp6g13250.1","No alias","Marchantia polymorpha","plastidial ribosome biogenesis factor (PAC)","protein_coding" "Mp6g13950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g15010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g19590.1","No alias","Marchantia polymorpha","component PIG-S of GPI transamidase complex","protein_coding" "Mp6g20060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp6g21360.1","No alias","Marchantia polymorpha","manganese/calcium cation transporter (BICAT)","protein_coding" "Mp7g02710.1","No alias","Marchantia polymorpha","ELYS scaffold nucleoporin of nuclear pore complex","protein_coding" "Mp7g05420.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g06280.1","No alias","Marchantia polymorpha","transcription termination factor (TTF1). transcription factor (MYB-related)","protein_coding" "Mp7g08900.1","No alias","Marchantia polymorpha","TAC18 cofactor of plastid-encoded RNA polymerase","protein_coding" "Mp7g10040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g10810.1","No alias","Marchantia polymorpha","PAP7/TAC14 cofactor of plastid-encoded RNA polymerase","protein_coding" "Mp7g12880.1","No alias","Marchantia polymorpha","exoribonuclease (RRP6L)","protein_coding" "Mp7g13070.1","No alias","Marchantia polymorpha","Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 274.1) & Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis (sp|p52407|e13b_hevbr : 215.0)","protein_coding" "Mp7g13800.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g14040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g17710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g17950.1","No alias","Marchantia polymorpha","IMP dehydrogenase","protein_coding" "Mp7g18240.1","No alias","Marchantia polymorpha","pyrroline-5-carboxylate synthetase","protein_coding" "Mp7g18570.1","No alias","Marchantia polymorpha","AAA-ATPase At4g25835 OS=Arabidopsis thaliana (sp|q8ry66|aatpd_arath : 407.0)","protein_coding" "Mp8g00040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g02100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g05580.1","No alias","Marchantia polymorpha","component FtsHi of protein translocation ATPase motor complex","protein_coding" "Mp8g08950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g09000.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g09010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g09630.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g10290.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana (sp|q9fft9|rh32_arath : 623.0)","protein_coding" "Mp8g10380.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding" "Mp8g11200.1","No alias","Marchantia polymorpha","Nodulin-26-like intrinsic protein (NIP)","protein_coding" "Mp8g12060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g12160.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g14130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g14400.1","No alias","Marchantia polymorpha","phosphomevalonate kinase","protein_coding" "Mp8g15050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp8g16810.1","No alias","Marchantia polymorpha","component Pex7 of cargo-receptor system","protein_coding" "Potri.004G061400","No alias","Populus trichocarpa","phosphate transporter 2;1","protein_coding" "Potri.008G186601","No alias","Populus trichocarpa","phosphate transporter 2;1","protein_coding" "Potri.010G046300","No alias","Populus trichocarpa","phosphate transporter 2;1","protein_coding" "Pp1s100_198V6","No alias","Physcomitrella patens","sodium phosphate symporter","protein_coding" "Pp1s102_201V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s108_32V6","No alias","Physcomitrella patens","calcium-dependent protein kinase","protein_coding" "Pp1s10_122V6","No alias","Physcomitrella patens","T7B11.33; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s10_175V6","No alias","Physcomitrella patens","ubiquinol--cytochrome-c reductase-like protein","protein_coding" "Pp1s111_190V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s111_42V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s112_141V6","No alias","Physcomitrella patens","transfactor-like protein","protein_coding" "Pp1s115_97V6","No alias","Physcomitrella patens","glycosyl transferase family 1 protein","protein_coding" "Pp1s11_63V6","No alias","Physcomitrella patens","carboxylic ester","protein_coding" "Pp1s121_71V6","No alias","Physcomitrella patens","T10O22.22; suppressor of lin-12-like protein-related / sel-1 protein-related [Arabidopsis thaliana]","protein_coding" "Pp1s123_90V6","No alias","Physcomitrella patens","F26O13.10; protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana]","protein_coding" "Pp1s125_63V6","No alias","Physcomitrella patens","sua5 family protein","protein_coding" "Pp1s126_125V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s129_113V6","No alias","Physcomitrella patens","ribosomal protein s6","protein_coding" "Pp1s136_27V6","No alias","Physcomitrella patens","dna binding","protein_coding" "Pp1s142_114V6","No alias","Physcomitrella patens","heat shock 70kda protein 12a","protein_coding" "Pp1s143_76V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s145_110V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s14_223V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s155_9V6","No alias","Physcomitrella patens","F26O13.150; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s159_78V6","No alias","Physcomitrella patens","T1D16.8; smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s15_482V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s164_135V6","No alias","Physcomitrella patens","Heterokaryon incompatibility protein 6, OR allele (Het-6(OR)) [Neurospora crassa]","protein_coding" "Pp1s175_6V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s17_234V6","No alias","Physcomitrella patens","tir-nbs-lrr resistance protein","protein_coding" "Pp1s17_88V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s184_42V6","No alias","Physcomitrella patens","glutamate carboxypeptidase","protein_coding" "Pp1s184_82V6","No alias","Physcomitrella patens","peroxidase 52","protein_coding" "Pp1s185_128V6","No alias","Physcomitrella patens","white-brown-complex abc transporter family","protein_coding" "Pp1s18_221V6","No alias","Physcomitrella patens","glycoside hydrolase family 28 expressed","protein_coding" "Pp1s18_296V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s197_54V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s19_243V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s1_209V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s1_62V6","No alias","Physcomitrella patens","F4P13.35; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s212_6V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s220_23V6","No alias","Physcomitrella patens","phosphate permease","protein_coding" "Pp1s229_34V6","No alias","Physcomitrella patens","MLP3.24; DGCR14-related [Arabidopsis thaliana]","protein_coding" "Pp1s229_67V6","No alias","Physcomitrella patens","dna binding protein","protein_coding" "Pp1s23_139V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s23_96V6","No alias","Physcomitrella patens","chlorophyll a-b binding protein of lhcii","protein_coding" "Pp1s244_45V6","No alias","Physcomitrella patens","MSJ1.10; phi-1-related protein [Arabidopsis thaliana]","protein_coding" "Pp1s254_25V6","No alias","Physcomitrella patens","chloroplast precursor","protein_coding" "Pp1s257_67V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 42","protein_coding" "Pp1s258_22V6","No alias","Physcomitrella patens","chloroplast phosphate transporter","protein_coding" "Pp1s258_28V6","No alias","Physcomitrella patens","phosphate transporter","protein_coding" "Pp1s266_63V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s270_23V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s279_23V6","No alias","Physcomitrella patens","F28H19.10; SEUSS transcriptional co-regulator [Arabidopsis thaliana]","protein_coding" "Pp1s27_256V6","No alias","Physcomitrella patens","tryptophan synthase subunit beta","protein_coding" "Pp1s282_43V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s28_23V6","No alias","Physcomitrella patens","F15M4.11; armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s30_126V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s30_175V6","No alias","Physcomitrella patens","T5P19.10; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s30_228V6","No alias","Physcomitrella patens","protein tyrosine phosphatase","protein_coding" "Pp1s30_64V6","No alias","Physcomitrella patens","T9D9.18; allergen-related [Arabidopsis thaliana]","protein_coding" "Pp1s310_38V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s311_77V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s315_11V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s316_34V6","No alias","Physcomitrella patens","tpl protein binding protein homodimerization transcription repressor","protein_coding" "Pp1s319_23V6","No alias","Physcomitrella patens","F4H5.8; leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana]","protein_coding" "Pp1s339_68V6","No alias","Physcomitrella patens","auxin-binding protein 1","protein_coding" "Pp1s33_272V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s347_26V6","No alias","Physcomitrella patens","mitochondrial succinate dehydrogenase iron-sulphur subunit","protein_coding" "Pp1s349_2V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s34_328V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s372_19V6","No alias","Physcomitrella patens","heat shock protein","protein_coding" "Pp1s375_26V6","No alias","Physcomitrella patens","cation proton exchanger","protein_coding" "Pp1s385_25V6","No alias","Physcomitrella patens","Light-sensor Protein kinase [Includes: Phytochrome; Protein kinase ] [Ceratodon purpureus]","protein_coding" "Pp1s38_220V6","No alias","Physcomitrella patens","acyltransferase like 1","protein_coding" "Pp1s38_279V6","No alias","Physcomitrella patens","F8J2.200; protein kinase family protein [EC:2.7.1.-] [Arabidopsis thaliana]","protein_coding" "Pp1s38_312V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s3_564V6","No alias","Physcomitrella patens","metal ion binding","protein_coding" "Pp1s3_609V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s403_56V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s41_144V6","No alias","Physcomitrella patens","acid phosphatase lysophosphatidic","protein_coding" "Pp1s48_149V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding" "Pp1s4_179V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s4_432V6","No alias","Physcomitrella patens","conserved hypothetical protein [Candida albicans SC5314]","protein_coding" "Pp1s4_440V6","No alias","Physcomitrella patens","sodium phosphate symporter","protein_coding" "Pp1s518_6V6","No alias","Physcomitrella patens","regulatory protein","protein_coding" "Pp1s59_326V6","No alias","Physcomitrella patens","pyruvate decarboxylase","protein_coding" "Pp1s5_368V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s60_62V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s64_155V6","No alias","Physcomitrella patens","delta-6 fatty acid desaturase","protein_coding" "Pp1s66_208V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s6_447V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s70_15V6","No alias","Physcomitrella patens","pyruvate kinase","protein_coding" "Pp1s72_94V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s74_182V6","No alias","Physcomitrella patens","loc494863 protein","protein_coding" "Pp1s79_13V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s7_129V6","No alias","Physcomitrella patens","F24C20.8; expressed protein [Arabidopsis thaliana]","protein_coding" "Pp1s80_170V6","No alias","Physcomitrella patens","oligomycin sensitivity conferring protein","protein_coding" "Pp1s81_158V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s85_190V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s85_68V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s89_67V6","No alias","Physcomitrella patens","MGI19.12; ser/thr protein phosphatase catalytic subunit [Arabidopsis thaliana]","protein_coding" "Pp1s8_142V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s8_146V6","No alias","Physcomitrella patens","cytosolic purine 5-","protein_coding" "Pp1s8_39V6","No alias","Physcomitrella patens","serine threonine-specific protein","protein_coding" "Pp1s9105_1V6","No alias","Physcomitrella patens","F2K11.14; transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana]","protein_coding" "Pp1s96_37V6","No alias","Physcomitrella patens","translation initiation factor eif-2b alpha subunit","protein_coding" "Pp1s97_234V6","No alias","Physcomitrella patens","No description available","protein_coding" "Pp1s99_191V6","No alias","Physcomitrella patens","No description available","protein_coding" "PSME_00000091-RA","No alias","Pseudotsuga menziesii","(at1g48030 : 746.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 736.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (reliability: 1492.0) & (original description: no original description)","protein_coding" "PSME_00000544-RA","No alias","Pseudotsuga menziesii","(at5g13020 : 134.0) Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT) domain-containing protein (TAIR:AT2G44440.1); Has 417 Blast hits to 397 proteins in 49 species: Archae - 0; Bacteria - 2; Metazoa - 101; Fungi - 4; Plants - 307; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)","protein_coding" "PSME_00000683-RA","No alias","Pseudotsuga menziesii","(at5g11060 : 216.0) A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root.; KNOTTED1-like homeobox gene 4 (KNAT4); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5905 Blast hits to 5890 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2030; Fungi - 312; Plants - 3367; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (o04136|knap3_maldo : 214.0) Homeobox protein knotted-1-like 3 (KNAP3) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 432.0) & (original description: no original description)","protein_coding" "PSME_00000730-RA","No alias","Pseudotsuga menziesii","(at2g23390 : 209.0) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 1088 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description)","protein_coding" "PSME_00001069-RA","No alias","Pseudotsuga menziesii","(at1g67440 : 129.0) embryo defective 1688 (emb1688); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), EngC GTPase (InterPro:IPR010914), GTPase EngC (InterPro:IPR004881); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1); Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18; Bacteria - 4575; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 734 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "PSME_00001217-RA","No alias","Pseudotsuga menziesii","(at4g37560 : 464.0) Acetamidase/Formamidase family protein; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: Acetamidase/Formamidase family protein (TAIR:AT4G37550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 928.0) & (original description: no original description)","protein_coding" "PSME_00001319-RA","No alias","Pseudotsuga menziesii","(at1g55740 : 564.0) seed imbibition 1 (SIP1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1); Has 563 Blast hits to 527 proteins in 159 species: Archae - 29; Bacteria - 119; Metazoa - 0; Fungi - 82; Plants - 322; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q93xk2|stsyn_pea : 224.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 1128.0) & (original description: no original description)","protein_coding" "PSME_00001919-RA","No alias","Pseudotsuga menziesii","(at3g27925 : 233.0) Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.; DegP protease 1 (DEGP1); FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis, protein catabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: Trypsin family protein with PDZ domain (TAIR:AT5G39830.1); Has 16838 Blast hits to 16778 proteins in 2643 species: Archae - 108; Bacteria - 11023; Metazoa - 354; Fungi - 149; Plants - 421; Viruses - 7; Other Eukaryotes - 4776 (source: NCBI BLink). & (reliability: 466.0) & (original description: no original description)","protein_coding" "PSME_00001982-RA","No alias","Pseudotsuga menziesii","(at5g25830 : 153.0) Encodes a member of the GATA factor family of zinc finger transcription factors.; GATA transcription factor 12 (GATA12); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 9 (TAIR:AT4G32890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) & (original description: no original description)","protein_coding" "PSME_00002301-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00002395-RA","No alias","Pseudotsuga menziesii","(q40731|stad_orysa : 468.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Oryza sativa (Rice) & (at2g43710 : 461.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 922.0) & (original description: no original description)","protein_coding" "PSME_00002406-RA","No alias","Pseudotsuga menziesii","(at3g11900 : 343.0) encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.; aromatic and neutral transporter 1 (ANT1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4625 Blast hits to 4600 proteins in 287 species: Archae - 17; Bacteria - 63; Metazoa - 1652; Fungi - 791; Plants - 1313; Viruses - 9; Other Eukaryotes - 780 (source: NCBI BLink). & (reliability: 686.0) & (original description: no original description)","protein_coding" "PSME_00002409-RA","No alias","Pseudotsuga menziesii","(at5g42390 : 1155.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2310.0) & (original description: no original description)","protein_coding" "PSME_00005125-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005126-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00005595-RA","No alias","Pseudotsuga menziesii","(at1g27480 : 431.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); Has 1076 Blast hits to 1070 proteins in 248 species: Archae - 0; Bacteria - 41; Metazoa - 667; Fungi - 0; Plants - 226; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 862.0) & (original description: no original description)","protein_coding" "PSME_00006300-RA","No alias","Pseudotsuga menziesii","(at3g59630 : 427.0) diphthamide synthesis DPH2 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Diphthamide synthesis, DPH1/DHP2 (InterPro:IPR002728), Diphthamide synthesis, DHP2 (InterPro:IPR010014); BEST Arabidopsis thaliana protein match is: diphthamide synthesis DPH2 family protein (TAIR:AT5G62030.1); Has 995 Blast hits to 948 proteins in 287 species: Archae - 127; Bacteria - 0; Metazoa - 243; Fungi - 308; Plants - 94; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 854.0) & (original description: no original description)","protein_coding" "PSME_00006371-RA","No alias","Pseudotsuga menziesii","(at3g52610 : 209.0) unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description)","protein_coding" "PSME_00007142-RA","No alias","Pseudotsuga menziesii","(at2g41540 : 268.0) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.; GPDHC1; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)","protein_coding" "PSME_00009281-RA","No alias","Pseudotsuga menziesii","(q41062|seca_pea : 517.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (at4g01800 : 498.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (reliability: 996.0) & (original description: no original description)","protein_coding" "PSME_00009312-RA","No alias","Pseudotsuga menziesii","(at5g58270 : 342.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 179.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 684.0) & (original description: no original description)","protein_coding" "PSME_00009871-RA","No alias","Pseudotsuga menziesii","(at4g31990 : 700.0) Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (p37833|aatc_orysa : 444.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1400.0) & (original description: no original description)","protein_coding" "PSME_00010418-RA","No alias","Pseudotsuga menziesii","(at3g01500 : 290.0) Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.; carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink). & (p27141|cahc_tobac : 287.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (reliability: 580.0) & (original description: no original description)","protein_coding" "PSME_00010688-RA","No alias","Pseudotsuga menziesii","(at4g13640 : 154.0) unfertilized embryo sac 16 (UNE16); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G24120.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 308.0) & (original description: no original description)","protein_coding" "PSME_00011263-RA","No alias","Pseudotsuga menziesii","(at1g65070 : 535.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (reliability: 1070.0) & (original description: no original description)","protein_coding" "PSME_00011620-RA","No alias","Pseudotsuga menziesii","(at5g27430 : 129.0) Signal peptidase subunit; FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal peptidase 22kDa subunit (InterPro:IPR007653); BEST Arabidopsis thaliana protein match is: Signal peptidase subunit (TAIR:AT3G05230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "PSME_00012865-RA","No alias","Pseudotsuga menziesii","(at5g03450 : 188.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description)","protein_coding" "PSME_00013084-RA","No alias","Pseudotsuga menziesii","(at1g20870 : 231.0) HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G54850.1); Has 109 Blast hits to 81 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)","protein_coding" "PSME_00013765-RA","No alias","Pseudotsuga menziesii","(at3g48000 : 800.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (p17202|badh_spiol : 367.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1600.0) & (original description: no original description)","protein_coding" "PSME_00013865-RA","No alias","Pseudotsuga menziesii","(q6z2t3|lsi1_orysa : 195.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (at1g80760 : 168.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (reliability: 336.0) & (original description: no original description)","protein_coding" "PSME_00014257-RA","No alias","Pseudotsuga menziesii","(at4g01130 : 261.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 230.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 522.0) & (original description: no original description)","protein_coding" "PSME_00015436-RA","No alias","Pseudotsuga menziesii","(at2g16850 : 425.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 424.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 850.0) & (original description: no original description)","protein_coding" "PSME_00016715-RA","No alias","Pseudotsuga menziesii","(at2g25320 : 656.0) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (reliability: 1312.0) & (original description: no original description)","protein_coding" "PSME_00016798-RA","No alias","Pseudotsuga menziesii","(at2g41460 : 339.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51173|apea_dicdi : 178.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (reliability: 678.0) & (original description: no original description)","protein_coding" "PSME_00017054-RA","No alias","Pseudotsuga menziesii","(q39857|xth_soybn : 137.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (at5g13870 : 136.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 272.0) & (original description: no original description)","protein_coding" "PSME_00017647-RA","No alias","Pseudotsuga menziesii","(o81155|cyskp_soltu : 352.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (at2g43750 : 347.0) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide.; O-acetylserine (thiol) lyase B (OASB); CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3). & (reliability: 694.0) & (original description: no original description)","protein_coding" "PSME_00018633-RA","No alias","Pseudotsuga menziesii","(at2g45540 : 471.0) WD-40 repeat family protein / beige-related; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60920.1). & (q36795|seca_spiol : 363.0) Preprotein translocase secA subunit, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 942.0) & (original description: no original description)","protein_coding" "PSME_00019142-RA","No alias","Pseudotsuga menziesii","(at1g08570 : 197.0) Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.; atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)","protein_coding" "PSME_00019616-RA","No alias","Pseudotsuga menziesii","(at1g64810 : 395.0) chloroplast APO1; ACCUMULATION OF PHOTOSYSTEM ONE 1 (APO1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)","protein_coding" "PSME_00019769-RA","No alias","Pseudotsuga menziesii","(at3g05530 : 728.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (o23894|prs6a_bracm : 727.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Brassica campestris (Field mustard) & (reliability: 1456.0) & (original description: no original description)","protein_coding" "PSME_00019839-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00021543-RA","No alias","Pseudotsuga menziesii","(p37890|cbp1_orysa : 432.0) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine carboxypeptidase I) (Carboxypeptidase C) - Oryza sativa (Rice) & (at4g12910 : 423.0) serine carboxypeptidase-like 20 (scpl20); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1); Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0; Bacteria - 294; Metazoa - 699; Fungi - 932; Plants - 1620; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (reliability: 846.0) & (original description: no original description)","protein_coding" "PSME_00025224-RA","No alias","Pseudotsuga menziesii","(at1g52920 : 460.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 920.0) & (original description: no original description)","protein_coding" "PSME_00025604-RA","No alias","Pseudotsuga menziesii","(at4g20130 : 309.0) plastid transcriptionally active 14 (PTAC14); LOCATED IN: plastid chromosome, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT1G24610.1); Has 493 Blast hits to 493 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 96; Plants - 292; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description)","protein_coding" "PSME_00026794-RA","No alias","Pseudotsuga menziesii","(at1g56310 : 275.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein (TAIR:AT5G24340.1); Has 1695 Blast hits to 1690 proteins in 549 species: Archae - 0; Bacteria - 819; Metazoa - 246; Fungi - 58; Plants - 209; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). & (reliability: 550.0) & (original description: no original description)","protein_coding" "PSME_00027112-RA","No alias","Pseudotsuga menziesii","(p93431|rca_orysa : 220.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Oryza sativa (Rice) & (at2g39730 : 210.0) Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco.; rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 10 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2322 Blast hits to 2274 proteins in 510 species: Archae - 328; Bacteria - 451; Metazoa - 248; Fungi - 425; Plants - 405; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (reliability: 420.0) & (original description: no original description)","protein_coding" "PSME_00027156-RA","No alias","Pseudotsuga menziesii","(at5g53580 : 423.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (reliability: 846.0) & (original description: no original description)","protein_coding" "PSME_00027490-RA","No alias","Pseudotsuga menziesii",""(at2g45510 : 436.0) member of CYP704A; ""cytochrome P450, family 704, subfamily A, polypeptide 2"" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (q43078|c97b1_pea : 104.0) Cytochrome P450 97B1 (EC 1.14.-.-) (P450 97A2) - Pisum sativum (Garden pea) & (reliability: 872.0) & (original description: no original description)"","protein_coding" "PSME_00028556-RA","No alias","Pseudotsuga menziesii","(at4g37550 : 264.0) Acetamidase/Formamidase family protein; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: Acetamidase/Formamidase family protein (TAIR:AT4G37560.1). & (reliability: 528.0) & (original description: no original description)","protein_coding" "PSME_00029868-RA","No alias","Pseudotsuga menziesii","(at2g47980 : 519.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 1038.0) & (original description: no original description)","protein_coding" "PSME_00031121-RA","No alias","Pseudotsuga menziesii","(at1g56280 : 110.0) Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal; drought-induced 19; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT3G05700.1). & (reliability: 220.0) & (original description: no original description)","protein_coding" "PSME_00032055-RA","No alias","Pseudotsuga menziesii","(p19866|g3pa_spiol : 603.0) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A) - Spinacia oleracea (Spinach) & (at1g12900 : 587.0) glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1). & (reliability: 1174.0) & (original description: no original description)","protein_coding" "PSME_00032447-RA","No alias","Pseudotsuga menziesii","(at1g79600 : 647.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1294.0) & (original description: no original description)","protein_coding" "PSME_00032632-RA","No alias","Pseudotsuga menziesii","(at4g29060 : 306.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 612.0) & (original description: no original description)","protein_coding" "PSME_00032633-RA","No alias","Pseudotsuga menziesii","(at4g29060 : 325.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 650.0) & (original description: no original description)","protein_coding" "PSME_00032838-RA","No alias","Pseudotsuga menziesii","(at2g32560 : 91.3) F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G26850.1); Has 86 Blast hits to 86 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 182.6) & (original description: no original description)","protein_coding" "PSME_00033325-RA","No alias","Pseudotsuga menziesii","(at2g31890 : 333.0) Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance.; RAP; CONTAINS InterPro DOMAIN/s: RAP domain (InterPro:IPR013584); Has 766 Blast hits to 576 proteins in 113 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 18; Plants - 194; Viruses - 0; Other Eukaryotes - 390 (source: NCBI BLink). & (reliability: 666.0) & (original description: no original description)","protein_coding" "PSME_00033493-RA","No alias","Pseudotsuga menziesii","(at5g53170 : 451.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 233.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 902.0) & (original description: no original description)","protein_coding" "PSME_00033721-RA","No alias","Pseudotsuga menziesii","(at3g53720 : 380.0) member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells.; cation/H+ exchanger 20 (CHX20); CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10038 Blast hits to 10006 proteins in 2135 species: Archae - 380; Bacteria - 7898; Metazoa - 11; Fungi - 167; Plants - 678; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). & (reliability: 760.0) & (original description: no original description)","protein_coding" "PSME_00034990-RA","No alias","Pseudotsuga menziesii","(at5g06770 : 169.0) KH domain-containing protein / zinc finger (CCCH type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein / zinc finger (CCCH type) family protein (TAIR:AT3G12130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)","protein_coding" "PSME_00036848-RA","No alias","Pseudotsuga menziesii","(at5g03406 : 149.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: histidine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: histidyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Histidyl-tRNA synthetase 1 (TAIR:AT3G46100.1); Has 9735 Blast hits to 9726 proteins in 2912 species: Archae - 252; Bacteria - 6828; Metazoa - 173; Fungi - 149; Plants - 82; Viruses - 0; Other Eukaryotes - 2251 (source: NCBI BLink). & (reliability: 298.0) & (original description: no original description)","protein_coding" "PSME_00037031-RA","No alias","Pseudotsuga menziesii","(at2g41720 : 628.0) EMBRYO DEFECTIVE 2654 (EMB2654); INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q76c99|rf1_orysa : 205.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1256.0) & (original description: no original description)","protein_coding" "PSME_00037124-RA","No alias","Pseudotsuga menziesii","(q8gve1|cigr2_orysa : 538.0) Chitin-inducible gibberellin-responsive protein 2 - Oryza sativa (Rice) & (at5g48150 : 525.0) Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.; phytochrome a signal transduction 1 (PAT1); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 21 (TAIR:AT2G04890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1050.0) & (original description: no original description)","protein_coding" "PSME_00039445-RA","No alias","Pseudotsuga menziesii","(at2g47710 : 87.0) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 174.0) & (original description: no original description)","protein_coding" "PSME_00039990-RA","No alias","Pseudotsuga menziesii","(at2g03200 : 216.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 390.0) & (original description: no original description)","protein_coding" "PSME_00040449-RA","No alias","Pseudotsuga menziesii","(q8s7e1|cao_orysa : 621.0) Chlorophyllide a oxygenase, chloroplast precursor (EC 1.13.12.14) (Chlorophyll a oxygenase) (Chlorophyll b synthase) - Oryza sativa (Rice) & (at1g44446 : 593.0) Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.; CHLORINA 1 (CH1); CONTAINS InterPro DOMAIN/s: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site (InterPro:IPR015881), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 55-II (TAIR:AT2G24820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1186.0) & (original description: no original description)","protein_coding" "PSME_00040846-RA","No alias","Pseudotsuga menziesii","(p51091|ldox_maldo : 281.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (at5g05600 : 278.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) & (original description: no original description)","protein_coding" "PSME_00040887-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00041536-RA","No alias","Pseudotsuga menziesii","(at3g24430 : 403.0) encodes a MRP-like protein with a nucleotide-binding domain.; HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101); FUNCTIONS IN: ATP binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376), Protein of unknown function DUF59 (InterPro:IPR002744), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 16372 Blast hits to 16340 proteins in 2775 species: Archae - 600; Bacteria - 10162; Metazoa - 436; Fungi - 428; Plants - 202; Viruses - 0; Other Eukaryotes - 4544 (source: NCBI BLink). & (reliability: 806.0) & (original description: no original description)","protein_coding" "PSME_00042316-RA","No alias","Pseudotsuga menziesii","(at3g06510 : 376.0) Encodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing; SENSITIVE TO FREEZING 2 (SFR2); FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to freezing; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 27 (TAIR:AT3G60120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) & (original description: no original description)","protein_coding" "PSME_00042929-RA","No alias","Pseudotsuga menziesii","(at4g40080 : 107.0) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)","protein_coding" "PSME_00043814-RA","No alias","Pseudotsuga menziesii","(at5g14500 : 392.0) aldose 1-epimerase family protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 784.0) & (original description: no original description)","protein_coding" "PSME_00043997-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 732.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 719.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 1460.0) & (original description: no original description)","protein_coding" "PSME_00044960-RA","No alias","Pseudotsuga menziesii","(at1g06570 : 522.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (o23920|hppd_dauca : 521.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (reliability: 1044.0) & (original description: no original description)","protein_coding" "PSME_00045021-RA","No alias","Pseudotsuga menziesii","(at2g44770 : 181.0) ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT3G60260.4); Has 866 Blast hits to 866 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 498; Fungi - 61; Plants - 182; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). & (reliability: 362.0) & (original description: no original description)","protein_coding" "PSME_00045378-RA","No alias","Pseudotsuga menziesii","(at2g35060 : 197.0) potassium transporter; K+ uptake permease 11 (KUP11); FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 10 (TAIR:AT1G31120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8vxb1|hak12_orysa : 197.0) Putative potassium transporter 12 (OsHAK12) - Oryza sativa (Rice) & (reliability: 394.0) & (original description: no original description)","protein_coding" "PSME_00046566-RA","No alias","Pseudotsuga menziesii","(at1g16220 : 493.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink). & (reliability: 986.0) & (original description: no original description)","protein_coding" "PSME_00047994-RA","No alias","Pseudotsuga menziesii","(at3g16230 : 224.0) Predicted eukaryotic LigT; FUNCTIONS IN: RNA binding, catalytic activity; INVOLVED IN: RNA metabolic process, regulation of transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088), Predicted eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097), Protein kinase A anchor protein, nuclear localisation signal domain (InterPro:IPR019510); BEST Arabidopsis thaliana protein match is: Predicted eukaryotic LigT (TAIR:AT3G16220.1). & (reliability: 448.0) & (original description: no original description)","protein_coding" "PSME_00048425-RA","No alias","Pseudotsuga menziesii","(at5g35100 : 182.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, peptidyl-cysteine S-nitrosylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.2); Has 4084 Blast hits to 4084 proteins in 692 species: Archae - 13; Bacteria - 526; Metazoa - 1613; Fungi - 701; Plants - 735; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink). & (q41651|cypb_vicfa : 81.3) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 364.0) & (original description: no original description)","protein_coding" "PSME_00049658-RA","No alias","Pseudotsuga menziesii","(at4g03020 : 286.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat (InterPro:IPR001680), WD repeat protein 23 (InterPro:IPR017399), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 572.0) & (original description: no original description)","protein_coding" "PSME_00051020-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00051121-RA","No alias","Pseudotsuga menziesii","(at5g57930 : 410.0) ACCUMULATION OF PHOTOSYSTEM ONE 2; ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 139 Blast hits to 117 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 820.0) & (original description: no original description)","protein_coding" "PSME_00051724-RA","No alias","Pseudotsuga menziesii","(at4g36390 : 593.0) Methylthiotransferase; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, iron-sulfur cluster binding, transferase activity, catalytic activity; INVOLVED IN: RNA modification, tRNA modification; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methylthiotransferase (InterPro:IPR005839), tRNA-i(6)A37 modification enzyme MiaB (InterPro:IPR006463), Methylthiotransferase, conserved site (InterPro:IPR020612), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Methylthiotransferase, N-terminal (InterPro:IPR013848), Radical SAM (InterPro:IPR007197), Deoxyribonuclease/rho motif-related TRAM (InterPro:IPR002792); BEST Arabidopsis thaliana protein match is: Methylthiotransferase (TAIR:AT1G72090.1); Has 15610 Blast hits to 15591 proteins in 2425 species: Archae - 356; Bacteria - 9631; Metazoa - 288; Fungi - 1; Plants - 108; Viruses - 0; Other Eukaryotes - 5226 (source: NCBI BLink). & (q2r1u4|ck5p1_orysa : 588.0) CDK5RAP1-like protein - Oryza sativa (Rice) & (reliability: 1186.0) & (original description: no original description)","protein_coding" "PSME_00052445-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding" "PSME_00052753-RA","No alias","Pseudotsuga menziesii","(at3g26570 : 409.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 818.0) & (original description: no original description)","protein_coding" "PSME_00055286-RA","No alias","Pseudotsuga menziesii","(at5g51890 : 142.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (p22196|per2_arahy : 134.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 274.0) & (original description: no original description)","protein_coding" "PSME_00057138-RA","No alias","Pseudotsuga menziesii","(at3g09650 : 658.0) RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.; HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1); Has 43769 Blast hits to 13527 proteins in 285 species: Archae - 3; Bacteria - 26; Metazoa - 343; Fungi - 654; Plants - 41314; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (q76c99|rf1_orysa : 135.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1316.0) & (original description: no original description)","protein_coding" "Seita.1G069400.1","No alias","Setaria italica ","regulatory protein *(FE) of florigen biosynthesis & GARP subgroup PHL transcription factor","protein_coding" "Seita.1G092800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G118300.1","No alias","Setaria italica ","protein involved in PS-II assembly *(LQY1) & protein disulfide isomerase *(LQY1)","protein_coding" "Seita.1G127200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G127300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G198600.1","No alias","Setaria italica ","bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.1G216200.1","No alias","Setaria italica ","phosphate transporter *(PHT2)","protein_coding" "Seita.1G251500.1","No alias","Setaria italica ","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding" "Seita.1G255900.1","No alias","Setaria italica ","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding" "Seita.1G348100.1","No alias","Setaria italica ","component *(Tic55) of inner envelope TIC translocation system","protein_coding" "Seita.1G368400.1","No alias","Setaria italica ","deubiquitinase *(OTU6-12)","protein_coding" "Seita.1G372300.1","No alias","Setaria italica ","plasma membrane intrinsic protein *(PIP)","protein_coding" "Seita.2G066600.1","No alias","Setaria italica ","peptidyl-prolyl cis-trans isomerase *(FKBP16-4)","protein_coding" "Seita.2G075500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G126000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G133000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G166700.1","No alias","Setaria italica ","component *(LHCq) of LHC-II complex","protein_coding" "Seita.2G259500.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding" "Seita.2G319500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G342700.1","No alias","Setaria italica ","EC_3.2 glycosylase & beta amylase","protein_coding" "Seita.2G351500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G384100.1","No alias","Setaria italica ","component *(NdhV) of NDH electron donor-binding subcomplex E","protein_coding" "Seita.2G396900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.2G401000.1","No alias","Setaria italica ","malate dehydrogenase component of AAA-ATPase motor complex","protein_coding" "Seita.3G031300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G073100.1","No alias","Setaria italica ","BBX class-IV transcription factor","protein_coding" "Seita.3G108700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G139600.1","No alias","Setaria italica ","regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & component *(SPA) of substrate adaptor module of CUL4-based ubiquitin ligase complex","protein_coding" "Seita.3G153500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G166800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G239400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G247900.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & pyruvate orthophosphate dikinase","protein_coding" "Seita.3G285000.1","No alias","Setaria italica ","SnRK3 SNF1-related protein kinase & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.3G353100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G390600.1","No alias","Setaria italica ","proton","protein_coding" "Seita.3G392700.1","No alias","Setaria italica ","MPBQ-methyltransferase *(VTE3) & MSBQ-methyltransferase *(APG1)","protein_coding" "Seita.3G397800.1","No alias","Setaria italica ","phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding" "Seita.3G408900.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G007000.1","No alias","Setaria italica ","phosphosugar phosphatase","protein_coding" "Seita.4G057300.1","No alias","Setaria italica ","calcium sensor *(CML)","protein_coding" "Seita.4G077400.1","No alias","Setaria italica ","Kinesin-14-type motor protein & accessory motility factor *(KAC)","protein_coding" "Seita.4G102100.1","No alias","Setaria italica ","small GTPase *(ROP)","protein_coding" "Seita.4G225700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.4G235100.1","No alias","Setaria italica ","class-III histone deacetylase","protein_coding" "Seita.5G067500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G081500.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G250000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G284800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G291800.1","No alias","Setaria italica ","glycine dehydrogenase component *(P-protein) of glycine cleavage system & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding" "Seita.5G300000.1","No alias","Setaria italica ","serine O-acetyltransferase *(SAT) & EC_2.3 acyltransferase","protein_coding" "Seita.5G384700.1","No alias","Setaria italica ","EC_3.1 hydrolase acting on ester bond & sedoheptulose-1,7-bisphosphatase","protein_coding" "Seita.5G411200.1","No alias","Setaria italica ","substrate adaptor BT of CUL3-BTB E3 ubiquitin ligase complex","protein_coding" "Seita.5G446500.1","No alias","Setaria italica ","protein involved in PS-II assembly *(Psb28)","protein_coding" "Seita.6G094800.1","No alias","Setaria italica ","regulatory protein *(GluTRBP) of glutamyl-tRNA reductase activity","protein_coding" "Seita.6G150800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G217100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.6G244600.1","No alias","Setaria italica ","PTP phosphatase *(LMW)","protein_coding" "Seita.6G255100.1","No alias","Setaria italica ","component *(PGR5) of cyclic electron flow PGR5-PGRL1 complex","protein_coding" "Seita.7G085500.1","No alias","Setaria italica ","plastidial acetyl-CoA synthetase & EC_6.2 ligase forming carbon-sulfur bond","protein_coding" "Seita.7G112200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G265500.1","No alias","Setaria italica ","sulfate transporter *(SULTR)","protein_coding" "Seita.8G037300.1","No alias","Setaria italica ","transcriptional co-regulator *(OFP)","protein_coding" "Seita.8G043100.1","No alias","Setaria italica ","actin filament protein","protein_coding" "Seita.8G095800.1","No alias","Setaria italica ","component *(NdhT) of NDH electron donor-binding subcomplex E","protein_coding" "Seita.8G116700.1","No alias","Setaria italica ","regulatory protein of RNA homeostasis","protein_coding" "Seita.8G181700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.8G216200.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Seita.9G010000.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G019200.1","No alias","Setaria italica ","mTERF-type transcription factor","protein_coding" "Seita.9G042200.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G067000.1","No alias","Setaria italica ","acid phosphatase storage protein","protein_coding" "Seita.9G115600.1","No alias","Setaria italica ","receptor protein *(AHK)","protein_coding" "Seita.9G166700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G315400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G337500.1","No alias","Setaria italica ","methylsterol monooxygenase SMO1 of phytosterol C4-demethylation complex & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding" "Seita.9G441500.1","No alias","Setaria italica ","delta-12/delta-15 fatty acid desaturase","protein_coding" "Seita.9G524300.1","No alias","Setaria italica ","protein involved in PS-II assembly *(SLR1470)","protein_coding" "Sobic.001G069000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G073500.1","No alias","Sorghum bicolor ","IMP/GMP-specific phosphohydrolase","protein_coding" "Sobic.001G100000.1","No alias","Sorghum bicolor ","large subunit of ADP-glucose pyrophosphorylase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.001G102800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.001G132400.1","No alias","Sorghum bicolor ","P3A-type proton-translocating ATPase *(AHA)","protein_coding" "Sobic.001G425400.1","No alias","Sorghum bicolor ","fructose-1,6-bisphosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding" "Sobic.001G528900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G051100.1","No alias","Sorghum bicolor ","ribose 5-phosphate isomerase & ribose 5-phosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding" "Sobic.002G102200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G145101.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G172700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G228400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G358500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.002G376600.1","No alias","Sorghum bicolor ","component *(WEB1) of WEB1-PMI2 cp-actin filament reorganisation complex","protein_coding" "Sobic.003G002300.1","No alias","Sorghum bicolor ","triose phosphate","protein_coding" "Sobic.003G006833.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G024300.1","No alias","Sorghum bicolor ","phytochelatin synthase *(PCS)","protein_coding" "Sobic.003G036200.1","No alias","Sorghum bicolor ","cytosolic NADP-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding" "Sobic.003G301900.2","No alias","Sorghum bicolor ","CDP-diacylglycerol synthase *(CDS) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.003G359100.1","No alias","Sorghum bicolor ","EC_3.1 hydrolase acting on ester bond & sedoheptulose-1,7-bisphosphatase","protein_coding" "Sobic.003G402000.2","No alias","Sorghum bicolor ","regulatory protein of RNA homeostasis","protein_coding" "Sobic.003G403300.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase & sucrose-phosphate synthase","protein_coding" "Sobic.003G403900.1","No alias","Sorghum bicolor ","auxin transporter *(PIN) & auxin efflux transporter *(PIN)","protein_coding" "Sobic.004G121400.1","No alias","Sorghum bicolor ","cation antiporter *(CAX)","protein_coding" "Sobic.004G127800.1","No alias","Sorghum bicolor ","bifunctional cGMP-dependent protein kinase and phosphatase *(PKG) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.004G176700.4","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G199900.1","No alias","Sorghum bicolor ","phosphate transporter *(PHT2)","protein_coding" "Sobic.004G308700.1","No alias","Sorghum bicolor ","linker protein *(LHCa5) between PS-I complex and NDH complex","protein_coding" "Sobic.004G351400.1","No alias","Sorghum bicolor ","nicotinate N-methyltransferase *(NANMT) & EC_2.1 transferase transferring one-carbon group","protein_coding" "Sobic.005G001700.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding" "Sobic.005G001800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.005G106600.2","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group & MAP-kinase protein kinase","protein_coding" "Sobic.005G184100.1","No alias","Sorghum bicolor ","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding" "Sobic.005G208275.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G074500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G102500.1","No alias","Sorghum bicolor ","monosaccharide transporter *(STP)","protein_coding" "Sobic.006G103400.1","No alias","Sorghum bicolor ","protein disulfide isomerase *(LQY1) & protein involved in PS-II assembly *(LQY1)","protein_coding" "Sobic.006G107832.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.006G126500.1","No alias","Sorghum bicolor ","substrate adaptor *(RIFP1) of SCF E3 ubiquitin ligase complex","protein_coding" "Sobic.006G239000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G009200.1","No alias","Sorghum bicolor ","adenylate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.007G101500.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group & small subunit *(APS) of ADP-glucose pyrophosphorylase","protein_coding" "Sobic.007G166300.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor & NADPH-dependent malate dehydrogenase *(NADP-MDH)","protein_coding" "Sobic.007G169100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.007G173800.1","No alias","Sorghum bicolor ","protein involved in PS-II assembly *(HCF244)","protein_coding" "Sobic.007G194700.1","No alias","Sorghum bicolor ","uridine/cytidine kinase & EC_2.4 glycosyltransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.008G001900.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding" "Sobic.008G052900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G115900.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding" "Sobic.008G116300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.008G129900.1","No alias","Sorghum bicolor ","iron-regulated metal cation transporter *(FPN) & iron cation transporter *(MAR1)","protein_coding" "Sobic.008G193200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G004500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G030900.1","No alias","Sorghum bicolor ","assembly factor involved in RuBisCo assembly *(BSD2)","protein_coding" "Sobic.009G034600.1","No alias","Sorghum bicolor ","cytosolic acyl-CoA","protein_coding" "Sobic.009G125400.1","No alias","Sorghum bicolor ","thylakoid membrane-remodeling GTPase *(FZL)","protein_coding" "Sobic.009G207900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.009G228100.1","No alias","Sorghum bicolor ","E2 ubiquitin-conjugating protein *(PHO2)","protein_coding" "Sobic.009G237000.1","No alias","Sorghum bicolor ","protease *(Deg)","protein_coding" "Sobic.009G244200.2","No alias","Sorghum bicolor ","zf-HD-type transcription factor","protein_coding" "Sobic.010G085100.1","No alias","Sorghum bicolor ","Kinesin-14-type motor protein & accessory motility factor *(KAC)","protein_coding" "Sobic.010G265500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Solyc01g009080","No alias","Solanum lycopersicum","Zeaxanthin epoxidase, chloroplastic (AHRD V3.3 *** A0A0B0MK82_GOSAR)","protein_coding" "Solyc01g010000","No alias","Solanum lycopersicum","ACT domain containing protein, putative, expressed (AHRD V3.3 *** Q75IY1_ORYSJ)","protein_coding" "Solyc01g010640","No alias","Solanum lycopersicum","Cytochrome b6-f complex subunit 5 (AHRD V3.3 --* PETG_FAGEA)","protein_coding" "Solyc01g081480","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT5G17670.1)","protein_coding" "Solyc01g094700","No alias","Solanum lycopersicum","Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** G7LBQ7_MEDTR)","protein_coding" "Solyc01g095070","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT1G01490.2)","protein_coding" "Solyc01g097770","No alias","Solanum lycopersicum","phototropin 2","protein_coding" "Solyc01g102610","No alias","Solanum lycopersicum","Ferric reduction oxidase 7 (AHRD V3.3 *** W9RRH7_9ROSA)","protein_coding" "Solyc01g105920","No alias","Solanum lycopersicum","(E)-beta-ocimene synthase","protein_coding" "Solyc01g110520","No alias","Solanum lycopersicum","Amidophosphoribosyltransferase, putative (AHRD V3.3 *** B9RG60_RICCO)","protein_coding" "Solyc02g069860","No alias","Solanum lycopersicum","Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR)","protein_coding" "Solyc02g071320","No alias","Solanum lycopersicum","AGAMOUS-like 31 (AHRD V3.3 --* AT5G65050.3)","protein_coding" "Solyc02g077950","No alias","Solanum lycopersicum","Dof zinc finger protein5","protein_coding" "Solyc02g081330","No alias","Solanum lycopersicum","phytoene synthase 2","protein_coding" "Solyc02g084990","No alias","Solanum lycopersicum","Mannan endo-1,4-beta-mannosidase-like protein (AHRD V3.3 *** G7KF03_MEDTR)","protein_coding" "Solyc02g089120","No alias","Solanum lycopersicum","Protein COBRA (AHRD V3.3 *-* A0A151S444_CAJCA)","protein_coding" "Solyc02g090250","No alias","Solanum lycopersicum","No description available","protein_coding" "Solyc03g111170","No alias","Solanum lycopersicum","4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR)","protein_coding" "Solyc03g112010","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** A0A103XWG4_CYNCS)","protein_coding" "Solyc03g114020","No alias","Solanum lycopersicum","D-ribose-binding periplasmic protein (AHRD V3.3 *** AT1G60010.1)","protein_coding" "Solyc03g118840","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1)","protein_coding" "Solyc03g119140","No alias","Solanum lycopersicum","MAP kinase kinase kinase 30","protein_coding" "Solyc03g121910","No alias","Solanum lycopersicum","Threonine synthase, putative (AHRD V3.3 *** B9RK44_RICCO)","protein_coding" "Solyc04g005090","No alias","Solanum lycopersicum","cofactor assembly of complex C (AHRD V3.3 *** AT1G59840.2)","protein_coding" "Solyc04g007640","No alias","Solanum lycopersicum","U-box domain-containing protein 10 (AHRD V3.3 *** A0A061E7I3_THECC)","protein_coding" "Solyc04g008570","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061GUB4_THECC)","protein_coding" "Solyc04g011500","No alias","Solanum lycopersicum","actin","protein_coding" "Solyc04g040160","No alias","Solanum lycopersicum","Pheophorbide A oxygenase, putative (AHRD V3.3 *** B9T573_RICCO)","protein_coding" "Solyc04g040190","No alias","Solanum lycopersicum","lycopene beta-cyclase","protein_coding" "Solyc04g053130","No alias","Solanum lycopersicum","Stress enhanced protein 2 (AHRD V3.3 *** K7XKQ9_SOLTU)","protein_coding" "Solyc04g063240","No alias","Solanum lycopersicum","STAY-GREEN-like protein (AHRD V3.3 *** AT1G44000.1)","protein_coding" "Solyc04g071940","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT1G52340.1),Pfam:PF13561","protein_coding" "Solyc04g072050","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** I3SNC1_MEDTR)","protein_coding" "Solyc04g074180","No alias","Solanum lycopersicum","cryptochrome 1","protein_coding" "Solyc04g074220","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT5G09430.1)","protein_coding" "Solyc04g077140","No alias","Solanum lycopersicum","DUF1005 family protein (AHRD V3.3 *** G7J413_MEDTR)","protein_coding" "Solyc04g082480","No alias","Solanum lycopersicum","Plant regulator RWP-RK family protein, putative (AHRD V3.3 *** A0A061FD78_THECC)","protein_coding" "Solyc05g005000","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT1G10740.4)","protein_coding" "Solyc05g007980","No alias","Solanum lycopersicum","Sulfate transporter, putative (AHRD V3.3 *** B9SJ59_RICCO)","protein_coding" "Solyc05g012620","No alias","Solanum lycopersicum","uvrB/uvrC motif-containing protein (AHRD V3.3 *** AT2G03390.4)","protein_coding" "Solyc05g013510","No alias","Solanum lycopersicum","Phosphate transporter (AHRD V3.3 *** K4BY72_SOLLC)","protein_coding" "Solyc05g052620","No alias","Solanum lycopersicum","Coronatine-insensitive 1","protein_coding" "Solyc05g056170","No alias","Solanum lycopersicum","phenylalanine ammonia-lyase 2","protein_coding" "Solyc05g056470","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** B9H498_POPTR)","protein_coding" "Solyc06g049050","No alias","Solanum lycopersicum","expansin 2","protein_coding" "Solyc06g060060","No alias","Solanum lycopersicum","NAD kinase 2 (AHRD V3.3 *** AT1G21640.1)","protein_coding" "Solyc06g068970","No alias","Solanum lycopersicum","3-oxo-5-alpha-steroid 4-dehydrogenase (AHRD V3.3 *** G7LDB8_MEDTR)","protein_coding" "Solyc06g069370","No alias","Solanum lycopersicum","bHLH transcription factor 046","protein_coding" "Solyc07g005360","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4CB08_SOLLC)","protein_coding" "Solyc07g015800","No alias","Solanum lycopersicum","F-box family protein, putative (AHRD V3.3 *** A0A061F027_THECC)","protein_coding" "Solyc07g016180","No alias","Solanum lycopersicum","Auxin Response Factor 7A","protein_coding" "Solyc07g042500","No alias","Solanum lycopersicum","Alpha/beta-Hydrolases superfamily protein, putative (AHRD V3.3 *** A0A061GM37_THECC)","protein_coding" "Solyc07g053180","No alias","Solanum lycopersicum","Leucine-rich repeat family protein (AHRD V3.3 *** D7M2Q7_ARALL)","protein_coding" "Solyc07g062080","No alias","Solanum lycopersicum","mitogen-activated protein kinase 11","protein_coding" "Solyc07g063120","No alias","Solanum lycopersicum","Ubiquitin ligase protein cop1, putative (AHRD V3.3 *** B9T5N2_RICCO)","protein_coding" "Solyc08g015780","No alias","Solanum lycopersicum","Ankyrin repeat family protein (AHRD V3.3 *** AT3G59910.2)","protein_coding" "Solyc08g082010","No alias","Solanum lycopersicum","Myosin heavy chain-like protein (AHRD V3.3 *** Q9FJ35_ARATH)","protein_coding" "Solyc09g011010","No alias","Solanum lycopersicum","Photosystem II 22 kDa protein, chloroplastic (AHRD V3.3 --* PSBS_SPIOL)","protein_coding" "Solyc09g014350","No alias","Solanum lycopersicum","Glycerol-3-phosphate acyltransferase (AHRD V3.3 *** G7L6J6_MEDTR)","protein_coding" "Solyc09g025270","No alias","Solanum lycopersicum","U-box domain-containing protein 3 (AHRD V3.3 *** W9RQV1_9ROSA)","protein_coding" "Solyc09g065900","No alias","Solanum lycopersicum","glutathione reductase, chloroplastic","protein_coding" "Solyc09g075080","No alias","Solanum lycopersicum","Phytochrome A-associated F-box protein, putative (AHRD V3.3 *** B9SAQ8_RICCO)","protein_coding" "Solyc09g092460","No alias","Solanum lycopersicum","Receptor protein kinase, putative (AHRD V3.3 *** B9T5F6_RICCO)","protein_coding" "Solyc09g092500","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** K4CWS6_SOLLC)","protein_coding" "Solyc10g044840","No alias","Solanum lycopersicum","yacP-like NYN domain protein (AHRD V3.3 *** AT2G02410.1)","protein_coding" "Solyc10g052530","No alias","Solanum lycopersicum","Small auxin up-regulated RNA72","protein_coding" "Solyc10g083360","No alias","Solanum lycopersicum","Calmodulin binding protein, putative (AHRD V3.3 *** B9T5N0_RICCO)","protein_coding" "Solyc10g083940","No alias","Solanum lycopersicum","Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A0K9NWX1_ZOSMR)","protein_coding" "Solyc10g085040","No alias","Solanum lycopersicum","SOUL heme-binding family protein (AHRD V3.3 *** AT2G37970.1)","protein_coding" "Solyc10g085830","No alias","Solanum lycopersicum","Caffeic acid O-methyltransferase (AHRD V3.3 *** A0A072VA70_MEDTR)","protein_coding" "Solyc10g086580","No alias","Solanum lycopersicum","Ribulose bisphosphate carboxylase/oxygenase activase (AHRD V3.3 *** V9IMY5_NICAT)","protein_coding" "Solyc11g006510","No alias","Solanum lycopersicum","Nuclear transport factor 2 (NTF2) family protein (AHRD V3.3 *** AT5G04830.2)","protein_coding" "Solyc11g069960","No alias","Solanum lycopersicum","RLK-1","protein_coding" "Solyc11g072110","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G55290.1)","protein_coding" "Solyc12g007010","No alias","Solanum lycopersicum","fe-S cluster assembly factor HCF101","protein_coding" "Solyc12g007100","No alias","Solanum lycopersicum","AAA-type ATPase family protein / ankyrin repeat family protein (AHRD V3.3 *** AT3G24530.1)","protein_coding" "Solyc12g008380","No alias","Solanum lycopersicum","LOW QUALITY:Avr9/Cf-9 rapidly elicited protein (AHRD V3.3 *** I3SWH2_MEDTR)","protein_coding" "Solyc12g009070","No alias","Solanum lycopersicum","Replication protein A 70 kDa DNA-binding subunit (AHRD V3.3 --* A0A151SSR0_CAJCA)","protein_coding" "Solyc12g013840","No alias","Solanum lycopersicum","SPA1-related 3 (AHRD V3.3 *** AT3G15354.3)","protein_coding" "Solyc12g042910","No alias","Solanum lycopersicum","Cryptochrome-1 (AHRD V3.3 *** A0A151SGR1_CAJCA)","protein_coding" "Solyc12g088230","No alias","Solanum lycopersicum","mitochondrial malate dehydrogenase","protein_coding" "Solyc12g096020","No alias","Solanum lycopersicum","Protein phosphatase 2c (AHRD V3.3 *** F8WL78_CITUN)","protein_coding" "Sopen05g008390","No alias","Solanum pennellii","Phosphate transporter family","protein_coding"